isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
tx.1	chr1	-	800	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	-2	1096	-2	134	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGAGTCCCTGGTCTT	1647	False	NA	NA	False	NA	NA	NA	4855935	4844524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
tx.10	chr1	+	2044	13	FSM	ENSMUSG00000025911.15	ENSMUST00000027044.15	2022	13	-7	-15	-7	15	multi-exon	FALSE	canonical	0	0	junction_3	21.4416197045735	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTACTGAGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	9618272	9647141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
tx.100	chr1	+	921	4	FSM	ENSMUSG00000073702.12	ENSMUST00000179954.8	630	4	8	-299	8	-247	multi-exon	FALSE	canonical	3	8615	junction_3	1758.8270712798	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGTTCCAGGTTTATG	NA	False	NA	NA	False	NA	NA	NA	39407017	39410745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_39407337_39409094_39409221_39410034_39410148_39410382
tx.1000	chr10	+	3127	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	-5	1545	-5	701	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	NA	False	NA	NA	NA	76367435	76389768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
tx.10000	chr5	+	945	2	FSM	ENSMUSG00000118332.2	ENSMUST00000118121.2	919	2	-26	0	12	0	multi-exon	TRUE	canonical	3	93	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGGTGTTTTCCTAATG	NA	False	NA	NA	False	NA	NA	NA	143534474	143537693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_143534890_143537163
tx.10001	chr5	+	2166	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	32	0	-8	0	multi-exon	FALSE	canonical	3	103	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGTATGTTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	143534492	143550280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_143534890_143548511
tx.10002	chr5	+	2732	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	59	1534	16	-1534	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGGACAAGTCCCTT	NA	False	NA	NA	False	NA	NA	NA	143803601	143839535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
tx.10003	chr5	+	2681	15	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	18	-1541	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	56.8630650182111	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTACTTTATTGGACAA	NA	False	NA	NA	False	NA	NA	NA	143803603	143839528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_143803742_143808700_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
tx.10004	chr5	-	1169	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	16	0	16	0	multi-exon	FALSE	canonical	3	560	junction_3	88.5023540176569	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	143846641	143839521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
tx.10005	chr5	-	1056	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	17	0	9	0	multi-exon	FALSE	canonical	3	207	junction_3	226.993881464286	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	143846648	143839521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
tx.10006	chr5	+	2910	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	29	2543	3	-17	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTTGAAGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	143846810	143868243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
tx.10007	chr5	-	1802	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	-35	2	-11	-2	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	168	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTTTCCTGTTGAGTC	NA	False	NA	NA	False	NA	NA	NA	143951706	143924728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
tx.10008	chr5	+	540	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	236	179	236	0	multi-exon	FALSE	canonical	3	246	junction_1	16.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTAGCTTGTTCTGCTC	1865	False	NA	NA	False	NA	NA	NA	144192279	144201205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_144192330_144192619_144192723_144200818
tx.10009	chr5	-	2020	13	ISM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	67815	2602	-38	7	3prime_fragment	FALSE	canonical	3	174	junction_5	36.565295477178	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTTGGCACGGTGGGA	NA	False	NA	NA	False	NA	NA	NA	144834842	144815913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792
tx.1001	chr10	-	2155	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-139	-3	-40	3	multi-exon	FALSE	canonical	3	60	junction_5	18.4407760742931	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTCTCTCTGCTA	1097	False	NA	NA	False	NA	NA	NA	76797761	76597687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
tx.10010	chr5	+	1598	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	29	5	-25	0	multi-exon	TRUE	canonical	3	332	junction_5	31.8084545015595	462	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	145020668	145045566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
tx.10011	chr5	+	1549	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	41	1515	-2	96	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	1220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGGGCGTGGTGGCACT	8073	False	NA	NA	False	NA	NA	NA	145051065	145064994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
tx.10012	chr5	-	1273	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	195	885	-45	430	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	1066	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTTTGGCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	145076853	145066463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
tx.10013	chr5	+	849	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	14	4	14	0	multi-exon	FALSE	canonical	3	705	junction_1	67.372397908936	295	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	145077185	145084884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
tx.10014	chr5	-	1122	2	ISM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	15681	12	15529	-12	3prime_fragment	FALSE	canonical	3	97	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTTTAACTGAGTGC	NA	False	NA	NA	False	NA	NA	NA	145088237	145084335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_145085316_145088095
tx.10015	chr5	-	3027	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	48	12	48	-12	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTTTAACTGAGTGC	NA	False	NA	NA	False	NA	NA	NA	145103870	145084335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
tx.10016	chr5	+	1708	8	FSM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	-33	-288	-3	0	multi-exon	FALSE	canonical	3	381	junction_6	148.975001327096	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	NA	False	NA	NA	NA	145104030	145118851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
tx.10017	chr5	+	1698	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	15	0	4	0	multi-exon	FALSE	canonical	3	267	junction_6	186.36939400129	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	NA	False	NA	NA	NA	145104037	145118851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
tx.10018	chr5	+	328	2	NNC	ENSMUSG00000029625.17	novel	1606	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	NA	False	NA	NA	NA	145104040	145118851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_145104103_145118585
tx.10019	chr5	-	440	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	509	6	-25	2	multi-exon	FALSE	canonical	3	4948	junction_3	568.415341101909	2141	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGCCTGGTGTAGTCA	8606	False	NA	NA	False	NA	NA	NA	145128363	145120513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
tx.1002	chr10	-	2173	16	NIC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	23.7172229965202	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	1073	False	NA	NA	False	NA	NA	NA	76797785	76597690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
tx.10020	chr5	-	1971	3	FSM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	-18	14	-18	-14	multi-exon	FALSE	canonical	3	18	junction_2	1	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTGTGATTGTTCAG	1573	False	NA	NA	False	NA	NA	NA	145138696	145131769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_145133010_145135486_145135611_145138089
tx.10021	chr5	-	1546	3	NNC	ENSMUSG00000029627.13	novel	1967	3	NA	NA	-2221	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9.5	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTGTGATTGTTCAG	NA	False	NA	NA	False	NA	NA	NA	145140899	145131769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_145133010_145135486_145135611_145140717
tx.10022	chr5	+	4100	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	0	4	0	-3	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTAGACTCTTTGTTT	1299	False	NA	NA	False	NA	NA	NA	145168532	145184108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
tx.10023	chr5	+	1273	5	FSM	ENSMUSG00000007812.17	ENSMUST00000200039.5	1765	5	18	474	4	0	multi-exon	FALSE	canonical	3	46	junction_3	167.334059593377	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1309	False	NA	NA	False	NA	NA	NA	145168542	145174658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859
tx.10024	chr5	-	3326	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	118	8	-19	-4	multi-exon	FALSE	canonical	3	59	junction_4	27.6348964173923	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTAAAGACTGTGTGCAAA	2299	False	NA	NA	False	NA	NA	NA	146158247	146146009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
tx.10025	chr5	+	1437	2	ISM	ENSMUSG00000029635.16	ENSMUST00000159615.2	1976	6	4803	-55	3348	0	3prime_fragment	FALSE	canonical	3	105	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	4963	False	NA	NA	False	NA	NA	NA	146236522	146239684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_146236661_146238385
tx.10026	chr5	+	1800	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	305	3091	305	2268	multi-exon	TRUE	canonical	3	97	junction_1	19.5037191768236	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGATTTGTTGAGTATT	NA	False	NA	NA	False	NA	NA	NA	146322099	146407334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
tx.10027	chr5	+	792	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	25	1039	25	7	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCCTTAGACTGTAG	NA	False	NA	NA	False	NA	NA	NA	146769724	146772803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
tx.10028	chr5	+	925	6	FSM	ENSMUSG00000041453.13	ENSMUST00000075453.9	899	6	-25	-1	24	0	multi-exon	FALSE	canonical	3	51	junction_1	5104.64844626934	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	NA	False	NA	NA	NA	146769979	146772796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_146770377_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
tx.10029	chr5	+	1099	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	-32	0	24	0	multi-exon	FALSE	canonical	3	123	junction_1	5077.72757835629	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	NA	False	NA	NA	NA	146769979	146772796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
tx.1003	chr10	+	2542	5	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	11	-6	intron_retention	FALSE	canonical	0	0	junction_2	44.4606567652796	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGGCTTTTCTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	76869056	76886259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_76869182_76874183_76874414_76877649_76878809_76880594_76880737_76885373
tx.10030	chr5	+	1084	4	FSM	ENSMUSG00000029641.9	ENSMUST00000031646.8	1126	4	43	-1	43	1	multi-exon	FALSE	canonical	2	3	junction_1	0.816496580927726	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTTTTCTGAATGTC	NA	False	NA	NA	False	NA	NA	NA	146781923	146784537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_146782151_146782469_146782527_146782649_146782730_146783817
tx.10031	chr5	+	1277	9	FSM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	14	7	14	1	multi-exon	FALSE	canonical	3	398	junction_8	56.9906790624572	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGACTCTTTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	146885480	146892417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
tx.10032	chr5	+	1445	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	-13	-6	-6	-2	multi-exon	FALSE	canonical	3	430	junction_2	50.1141553997328	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTGCTGTTTCCGTC	NA	False	NA	NA	False	NA	NA	NA	146885501	146892422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
tx.10033	chr5	-	1562	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	10	-438	0	-409	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	NA	False	NA	NA	NA	146900597	146891738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
tx.10034	chr5	+	928	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	207	2	5	-2	multi-exon	FALSE	canonical	3	400	junction_1	26.5	257	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTTCCTCTTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	147014362	147048169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_147014504_147038038_147038114_147047457
tx.10035	chr5	+	691	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	505	0	7	0	multi-exon	FALSE	canonical	3	451	junction_1	0	368	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGAGTGGTTTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	147014364	147015896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_147014504_147015344
tx.10036	chr5	+	741	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	164	674	-3	171	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	1618	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTGTGGTTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	147797434	147812592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
tx.10037	chr5	-	1272	5	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	4.55521678957215	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGTATACTCTTTC	8595	False	NA	NA	False	NA	NA	NA	147949138	147941084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147949013
tx.10038	chr5	+	967	3	ISM	ENSMUSG00000029651.17	ENSMUST00000071878.12	1211	7	37892	-17	6	17	3prime_fragment	FALSE	canonical	3	103	junction_2	5.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTAGTATAGTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	148239989	148250561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_148240413_148243439_148243538_148250115
tx.10039	chr5	+	1102	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	9	-102	9	31	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGGTAGAAGCATGCC	NA	False	NA	NA	False	NA	NA	NA	148239992	148250912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
tx.1004	chr10	+	2327	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	15	5	15	-5	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	76869060	76886260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
tx.10040	chr5	+	1195	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	27	-637	18	26	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAGGTAGAAGC	NA	False	NA	NA	False	NA	NA	NA	148240001	148250907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
tx.10041	chr5	-	1738	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	303	496	303	-2	multi-exon	FALSE	canonical	3	361	junction_2	34.1641259217911	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATATTTTTTTTTCA	211	False	NA	NA	False	NA	NA	NA	148489169	148441940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
tx.10042	chr5	+	556	2	NNC	ENSMUSG00000086494.2	novel	550	2	NA	NA	-38	4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	13	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTACCCTTTGACCCA	NA	False	NA	NA	False	NA	NA	NA	148678611	148679953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_148678795_148679580
tx.10043	chr5	-	1316	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	-4	1526	-4	0	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	1136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	6760	False	NA	NA	False	NA	NA	NA	148989854	148985037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
tx.10044	chr5	+	3150	10	FSM	ENSMUSG00000041264.17	ENSMUST00000100410.10	3148	10	1	-3	0	0	multi-exon	FALSE	canonical	3	110	junction_9	101.142119787266	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	149121476	149152244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
tx.10045	chr5	+	3485	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	313	-6	0	0	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	149121472	149152244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
tx.10046	chr5	+	2981	9	FSM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	-49	-1	0	0	multi-exon	FALSE	canonical	3	110	junction_8	110.241141934398	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	149121476	149152244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
tx.10047	chr5	+	1035	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	207	9	207	-9	multi-exon	FALSE	canonical	3	24	junction_2	7.22841614740048	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACGTCTTCAAGAGTCT	NA	False	NA	NA	False	NA	NA	NA	149201783	149224954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
tx.10048	chr5	+	682	2	NNC	ENSMUSG00000029658.18	novel	2482	23	NA	NA	28330	4	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGATTCTCGCTGTTCTTT	4903	False	NA	NA	False	NA	NA	NA	149533572	149535363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_149533852_149534960
tx.10049	chr5	-	3447	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	56	299	8	2	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	NA	False	NA	NA	NA	149559747	149540307	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
tx.1005	chr10	-	4202	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	1	860	1	-22	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCTAAAACATTTAC	5936	False	NA	NA	False	NA	NA	NA	77002381	76888871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
tx.10050	chr5	+	1382	2	FSM	ENSMUSG00000106674.2	ENSMUST00000202583.2	299	2	-8	-1075	-8	1075	multi-exon	FALSE	canonical	3	13	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTTGAGTCCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	149565066	149572330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_149565217_149571098
tx.10051	chr5	+	1080	11	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	10	-9935	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_10	165.154503420282	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAATGAGTGTTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	149601704	149664665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149664505
tx.10053	chr5	-	1999	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	11	6972	11	56	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATAATCTTTTGTG	5448	False	NA	NA	False	NA	NA	NA	150589066	150566408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
tx.10054	chr5	-	1475	5	ISM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	3515	6979	-610	49	3prime_fragment	FALSE	canonical	3	244	junction_2	15.8902485820707	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTTTTTATAATC	8952	False	NA	NA	False	NA	NA	NA	150585562	150566415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743
tx.10055	chr5	-	2133	2	ISM	ENSMUSG00000029655.18	ENSMUST00000144378.2	3842	3	-24	12272	11	1935	5prime_fragment	FALSE	canonical	3	228	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCATCAGATCTCC	5448	False	NA	NA	False	NA	NA	NA	150589066	150583946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_150585979_150588965
tx.10057	chr5	-	1222	9	FSM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	34	61	0	2	multi-exon	FALSE	canonical	3	280	junction_1	24.5098832106561	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTTTGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	151574673	151566281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
tx.10058	chr6	+	896	6	FSM	ENSMUSG00000001376.18	ENSMUST00000184780.8	1587	6	-13	704	9	-704	multi-exon	FALSE	canonical	3	151	junction_1	10.4575331699211	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAAG	-7	True	NA	NA	False	NA	NA	NA	3498412	3520641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206
tx.10059	chr6	+	3533	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	39	216	-1	0	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGTGTGAGACTACTA	1	True	NA	NA	False	NA	NA	NA	3498420	3603315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
tx.1006	chr10	+	382	2	ISM	ENSMUSG00000020260.10	ENSMUST00000217993.2	7010	5	-17	8767	-17	-6164	5prime_fragment	FALSE	canonical	3	179	junction_1	0	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGAGCAGTTCATTGC	NA	False	NA	NA	False	NA	NA	NA	77095134	77096636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_77095288_77096407
tx.10060	chr6	-	1482	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	29	5	-13	-5	multi-exon	FALSE	canonical	3	308	junction_1	40.3016404408335	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGTGTTGTGTGTTCTT	-6	True	NA	NA	False	NA	NA	NA	4086943	4076903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
tx.10061	chr6	-	1616	11	FSM	ENSMUSG00000004631.16	ENSMUST00000115579.8	1696	11	80	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	4.92848861214064	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTAAAATTTCTTTC	9948	False	4747138	NA	False	NA	NA	NA	4747124	4674349	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
tx.10062	chr6	-	788	3	ISM	ENSMUSG00000029759.10	ENSMUST00000156848.8	921	5	-19	9265	0	-8822	5prime_fragment	FALSE	canonical	3	44	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAAGGAAGGGA	19	True	NA	NA	False	NA	NA	NA	5256233	5245697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_5246334_5254515_5254587_5256152
tx.10063	chr6	-	1861	9	FSM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	75	473	-50	-473	multi-exon	FALSE	canonical	2	9	junction_7	2.57087047515039	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTGTTTATTCT	89	False	NA	NA	False	NA	NA	NA	5298380	5264619	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277871_5277928_5289012_5289084_5298211
tx.10064	chr6	-	1506	4	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	164213	0	42298	0	3prime_fragment	FALSE	canonical	3	629	junction_2	35.1883819210577	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	3344	False	NA	NA	False	NA	NA	NA	6052905	6041217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764
tx.10065	chr6	-	2925	17	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	159.387107383251	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	16	False	6217138	NA	False	NA	NA	NA	6217122	6041217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
tx.10066	chr6	-	3084	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_13	48.4240210344906	118	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	0	True	NA	NA	False	NA	NA	NA	6217138	6041217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
tx.10067	chr6	-	3092	18	FSM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	-25	0	-25	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	-5	True	NA	NA	False	NA	NA	NA	6217143	6041217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
tx.10068	chr6	-	3041	11	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-23	7540	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_6	39.8577470512321	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAGGTTAATGTCACAA	-3	True	NA	NA	False	NA	NA	NA	6217141	6107447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
tx.10069	chr6	-	842	6	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	-25	75787	-25	-2017	5prime_fragment	FALSE	canonical	3	590	junction_1	45.2972405340546	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGATCATGTATATTAT	-5	True	NA	NA	False	NA	NA	NA	6217143	6117004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
tx.1007	chr10	+	2207	9	FSM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	83	0	-17	0	multi-exon	FALSE	canonical	3	83	junction_5	28.5938695352693	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGTCCTAGAAATGGT	NA	False	NA	NA	False	NA	NA	NA	77095134	77105409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
tx.10070	chr6	-	459	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	19	994	19	-994	multi-exon	FALSE	canonical	3	3186	junction_2	110.5	1840	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGTTCAGATGTCT	-6	True	NA	NA	False	NA	NA	NA	6578639	6558287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_6558492_6560407_6560502_6578478
tx.10071	chr6	+	1003	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	2	3318	-1	-3318	multi-exon	FALSE	canonical	0	0	junction_1	0	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGTTGGGTGACCTA	-16	True	NA	NA	False	NA	NA	NA	6956005	7039661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_6956201_7038853
tx.10072	chr6	-	1963	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	38	0	38	0	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	2220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	-2	True	NA	NA	False	NA	NA	NA	7693216	7675168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
tx.10073	chr6	+	3623	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	81	6	81	0	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAACTTTGAAACTTTTT	-18	True	NA	NA	False	NA	NA	NA	8209302	8236268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
tx.10075	chr6	-	642	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	28	0	-5	0	multi-exon	FALSE	canonical	3	1410	junction_2	59.4474557908074	501	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCAATTGTTTT	-20	True	NA	NA	False	NA	NA	NA	8259145	8255935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
tx.10076	chr6	+	2080	4	FSM	ENSMUSG00000089862.9	ENSMUST00000159433.8	2025	4	-48	-7	0	0	multi-exon	FALSE	canonical	2	17	junction_2	5.43650214343336	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTTCATTGCATTAGTA	-38	True	NA	NA	False	NA	NA	NA	8259381	8428767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970
tx.10077	chr6	-	1412	11	NNC	ENSMUSG00000062995.13	novel	2075	14	NA	NA	-5437	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	22.4653065859338	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCACTCCTGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	8742534	8630526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8742455
tx.10078	chr6	-	1747	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	328	0	-2	0	multi-exon	FALSE	canonical	3	58	junction_8	7.8401183423021	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCACTCCTGTTTGGT	-22	True	NA	NA	False	NA	NA	NA	8778156	8630526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
tx.10079	chr6	-	507	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	23	80	-10	0	multi-exon	FALSE	canonical	3	8511	junction_2	453.262494465281	2083	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	-8	True	NA	NA	False	NA	NA	NA	11907459	11900370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
tx.1008	chr10	-	1493	6	ISM	ENSMUSG00000020262.16	ENSMUST00000105404.9	6557	11	104705	3539	26654	-3538	3prime_fragment	FALSE	canonical	2	18	junction_4	4.22374241638857	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCACGAGAATATAGAGGT	4977	False	NA	NA	False	NA	NA	NA	77149356	77130099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238
tx.10080	chr6	+	523	3	FSM	ENSMUSG00000029629.18	ENSMUST00000155037.4	478	3	26	-71	26	71	multi-exon	FALSE	canonical	3	67	junction_1	44	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAGAAAAGGAGAAAG	-30	True	NA	NA	False	NA	NA	NA	11907833	11933480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_11908017_11926725_11926837_11933251
tx.10081	chr6	+	2833	16	ISM	ENSMUSG00000029629.18	ENSMUST00000115511.9	3336	18	7345	7	6478	0	3prime_fragment	FALSE	canonical	3	98	junction_15	23.750555549058	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTATTTGAAATTCATA	6485	False	NA	NA	False	NA	NA	NA	11933259	12081197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
tx.10082	chr6	+	2184	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-44	3862	-21	3755	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCATCCTGAGTCGATG	-19	True	NA	NA	False	NA	NA	NA	13069793	13085406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
tx.10083	chr6	-	3919	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	61	607	5	-607	multi-exon	FALSE	canonical	3	155	junction_4	32.9194091684526	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-8	True	NA	NA	False	NA	NA	NA	13608038	13581292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
tx.10084	chr6	-	988	2	ISM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	71	22013	-2	682	5prime_fragment	FALSE	canonical	3	155	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTGCTTTTGCATGTTT	2	True	NA	NA	False	NA	NA	NA	13608028	13602698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_13603487_13607828
tx.10085	chr6	-	1057	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	51	2069	-1	-4	multi-exon	FALSE	canonical	3	64	junction_2	22	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCACCTATTGTTTTGGTC	-1	True	NA	NA	False	NA	NA	NA	13871466	13869802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_13870740_13871054_13871146_13871437
tx.10086	chr6	+	802	3	FSM	ENSMUSG00000097616.8	ENSMUST00000181225.2	1499	3	-37	734	6	-734	multi-exon	FALSE	canonical	3	16	junction_1	3.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATACCAAATGTACAGAT	-9	True	NA	NA	False	NA	NA	NA	13871530	13895687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_13871627_13881271_13881381_13895090
tx.10087	chr6	+	556	3	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	1.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGGGATACAAATA	NA	False	NA	NA	False	NA	NA	NA	15853126	15884849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_15853247_15878053_15878161_15884520
tx.10088	chr6	+	2442	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	0	-2	0	2	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTCTTTCTATGTCCT	-34	True	NA	NA	False	NA	NA	NA	17065147	17105824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
tx.10089	chr6	+	2237	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	52	248	0	-248	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	1303	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTATAGATTTTTAAAAAT	-4	True	NA	NA	False	NA	NA	NA	17637033	17666723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
tx.1009	chr10	-	1974	3	ISM	ENSMUSG00000032977.10	ENSMUST00000217681.2	780	5	9861	-1526	9861	0	3prime_fragment	FALSE	canonical	3	250	junction_2	12	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTCCCCTGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	77333288	77322494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_77324308_77325831_77325901_77333196
tx.10090	chr6	+	2260	10	FSM	ENSMUSG00000015733.14	ENSMUST00000130606.8	1046	10	-60	-1154	8	-230	multi-exon	FALSE	canonical	3	30	junction_6	571.076371619613	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAATAAGAGCATGTTGT	11	True	NA	NA	False	NA	NA	NA	17637048	17666741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660727_17660827_17662096_17662169_17665049_17665113_17665293
tx.10091	chr6	-	1747	13	FSM	ENSMUSG00000010796.12	ENSMUST00000010940.11	1736	13	-12	1	-8	-1	multi-exon	FALSE	canonical	1	1	junction_4	5.42307313450798	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTGTGCTCATTTGT	5	True	NA	NA	False	NA	NA	NA	18109068	18050963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_18051403_18054526_18054641_18055433_18055540_18071963_18072074_18073760_18073818_18074824_18074901_18075759_18075885_18076503_18076639_18077151_18077264_18103498_18103611_18104774_18104898_18108401_18108502_18108930
tx.10092	chr6	+	761	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	46	0	-16	0	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	648	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	-25	True	NA	NA	False	NA	NA	NA	18848623	18854052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
tx.10093	chr6	+	2589	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	74	1137	-4	-2	multi-exon	FALSE	canonical	3	104	junction_1	20.5043837280255	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	-15	True	NA	NA	False	NA	NA	NA	21949643	21974900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
tx.10094	chr6	+	2508	11	NIC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	44.129468612255	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	-6	True	NA	NA	False	NA	NA	NA	21949652	21974900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_21949793_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
tx.10095	chr6	+	2118	11	ISM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	427	1499	-22	9	3prime_fragment	FALSE	canonical	3	141	junction_5	14.2562267097574	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATTTATACTTTACAC	-29	True	NA	NA	False	NA	NA	NA	21949996	21974538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
tx.10096	chr6	-	1432	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	52	1342	-16	20	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTTTTTTTGTTGTTG	8	True	NA	NA	False	NA	NA	NA	22356113	22307860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
tx.10097	chr6	-	1367	7	NNC	ENSMUSG00000029695.14	novel	3701	24	NA	NA	42415	-330	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	2.92498812913071	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTCTTGAGTTTTTG	3	True	NA	NA	False	NA	NA	NA	23085164	23072501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_23073090_23074526_23074704_23075160_23075250_23075739_23075856_23077077_23077174_23078826_23078995_23085031
tx.10098	chr6	-	434	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	445	-4	2	4	multi-exon	FALSE	canonical	3	2597	junction_4	429.359042643799	999	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTTATTGACTT	-2	True	NA	NA	False	NA	NA	NA	24527567	24518660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
tx.10099	chr6	-	4321	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	21	10	0	-10	multi-exon	FALSE	canonical	3	160	junction_7	20.1893536300695	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATAAAATAGTGTGTCT	12	True	NA	NA	False	NA	NA	NA	24664987	24613813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
tx.101	chr1	+	689	4	ISM	ENSMUSG00000003135.16	ENSMUST00000195567.2	635	5	-33	19	-33	-19	intron_retention	FALSE	canonical	3	776	junction_1	19.2930615046504	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATTTCCTTTTTCCTA	181	False	NA	NA	False	NA	NA	NA	39579081	39584463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_39579157_39581480_39581684_39583972_39584070_39584149
tx.1010	chr10	-	2413	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-23	4	-23	-4	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTGCAGTCCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	77351642	77322498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
tx.10100	chr6	-	908	6	ISM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	7	12960	7	-102	5prime_fragment	FALSE	canonical	3	160	junction_2	27.1484806204694	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAGAAAGGAAAAGC	-2	True	NA	NA	False	NA	NA	NA	24665001	24626763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
tx.10101	chr6	-	898	3	ISM	ENSMUSG00000029676.16	ENSMUST00000166445.8	1923	15	49691	-643	-2130	-201	3prime_fragment	FALSE	canonical	3	142	junction_1	3.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	25748325	25743936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_25744693_25745889_25745996_25748289
tx.10102	chr6	-	2938	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	8	205	-2	-205	multi-exon	TRUE	canonical	3	94	junction_8	16.939542404853	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTCTGTGTGTGTG	8	True	NA	NA	False	NA	NA	NA	25809217	25743940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
tx.10103	chr6	-	2943	5	FSM	ENSMUSG00000039841.15	ENSMUST00000155494.2	703	5	8	-2248	-1	-788	multi-exon	FALSE	canonical	3	22	junction_4	12.1937483982572	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAGTTAGTATTATTC	2	True	NA	NA	False	NA	NA	NA	28261923	28242235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
tx.10104	chr6	+	1042	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	74	0	44	0	multi-exon	TRUE	canonical	3	1725	junction_4	143.712769091685	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	43	True	NA	NA	False	NA	NA	NA	28423632	28426601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
tx.10105	chr6	+	698	3	ISM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	1644	0	1495	0	3prime_fragment	FALSE	canonical	3	1725	junction_1	66.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	622	False	NA	NA	False	NA	NA	NA	28425202	28426601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_28425244_28425737_28425864_28426070
tx.10106	chr6	+	3447	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	24	11	13	-11	multi-exon	FALSE	canonical	3	582	junction_3	55.1049865830108	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	17	False	NA	NA	False	NA	NA	NA	28480370	28888820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
tx.10107	chr6	-	872	3	ISM	ENSMUSG00000029701.16	ENSMUST00000169214.8	1923	12	26405	-128	2616	128	3prime_fragment	FALSE	canonical	3	224	junction_1	22.5	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTTAACATTTTTAAAT	NA	False	NA	-38	True	NA	NA	NA	29128685	29125012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_29125524_29127796_29127900_29128427
tx.10108	chr6	-	1454	8	ISM	ENSMUSG00000029701.16	ENSMUST00000169214.8	1923	12	16451	-124	-7338	124	3prime_fragment	FALSE	canonical	3	180	junction_7	24.4857309551535	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTTTAACATTTTT	NA	False	NA	NA	False	NA	NA	NA	29138639	29125016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501
tx.10109	chr6	-	2705	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	318	1442	318	124	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTTTAACATTTTT	-7	True	NA	NA	False	NA	NA	NA	29164687	29125016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
tx.1011	chr10	+	2279	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	15	0	12	0	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTTTGTTTTGT	1306	False	NA	NA	False	NA	NA	NA	77417568	77434566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
tx.10110	chr6	-	1844	8	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	310	30338	310	2766	5prime_fragment	FALSE	canonical	3	173	junction_1	20.2545031526124	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAACAGTTCTGAGTTTG	-15	True	NA	NA	False	NA	NA	NA	29164695	29153912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
tx.10111	chr6	-	2566	15	FSM	ENSMUSG00000003500.14	ENSMUST00000162099.8	2580	15	14	0	3	0	multi-exon	TRUE	canonical	1	42	junction_14	63.7043554080817	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATCCTGTTTCTG	-9	True	NA	NA	False	NA	NA	NA	29216327	29200436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212170_29216070
tx.10112	chr6	-	2393	14	FSM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	42	2	-6	-1	multi-exon	FALSE	canonical	1	70	junction_10	46.9877234375763	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGATCCTGTTTCT	11	True	NA	NA	False	NA	NA	NA	29212254	29200437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
tx.10113	chr6	+	944	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	38	0	38	0	multi-exon	FALSE	canonical	3	124	junction_1	0	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTCCTGTTGACATG	39	False	NA	NA	False	NA	NA	NA	29272662	29275445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_29272810_29274648
tx.10114	chr6	+	3192	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	30	7	17	-4	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	16	False	NA	NA	False	NA	NA	NA	29348134	29376667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
tx.10115	chr6	+	3189	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	20	-539	20	-4	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	-2	True	NA	NA	False	NA	NA	NA	29348137	29376667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
tx.10116	chr6	+	660	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	43	0	43	0	multi-exon	FALSE	canonical	3	1924	junction_1	0	989	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	11	True	NA	NA	False	NA	NA	NA	29467759	29470511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_29467974_29470065
tx.10117	chr6	-	3957	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	253	41	0	-41	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAGAAAAAAGAAAAAAA	-8	True	NA	NA	False	NA	NA	NA	29609633	29540866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
tx.10118	chr6	-	4360	24	FSM	ENSMUSG00000012535.15	ENSMUST00000170350.8	3590	24	-73	-697	3	-47	multi-exon	FALSE	canonical	3	27	junction_23	180.197874854504	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACCAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29609883	29540872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29609364
tx.10119	chr6	+	688	2	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACGTGTATAATGTGTAT	NA	False	NA	NA	False	NA	NA	NA	29639006	29642168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_29639206_29641679
tx.1012	chr10	+	1593	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	128	909	0	0	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	241	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	False	NA	NA	False	NA	NA	NA	77442058	77453256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
tx.10120	chr6	+	540	2	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACGTGTATAATGTGTAT	NA	False	NA	NA	False	NA	NA	NA	29639034	29642168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_29639206_29641799
tx.10121	chr6	+	1936	3	ISM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	23029	5	23029	-5	3prime_fragment	FALSE	canonical	3	85	junction_1	4	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGCGTGTTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	29758721	29761359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_29759014_29759482_29759618_29759850
tx.10122	chr6	+	1954	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	178.740889433715	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	-31	True	NA	NA	False	NA	NA	NA	30047983	30144855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
tx.10123	chr6	+	2312	12	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	0	-16	combination_of_known_junctions	FALSE	canonical	3	271	junction_11	90.9985923058862	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-25	True	NA	NA	False	NA	NA	NA	30047989	30140887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
tx.10124	chr6	+	1906	12	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	127.487870108467	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	-19	True	NA	NA	False	NA	NA	NA	30047995	30144855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
tx.10125	chr6	+	2330	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-5	-28	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	163.040383545509	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATGAGGC	-19	True	NA	NA	False	NA	NA	NA	30047995	30140875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
tx.10126	chr6	+	2271	12	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-11	-27	combination_of_known_junctions	FALSE	canonical	3	218	junction_2	102.024061333144	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATGAGGCT	2	True	NA	NA	False	NA	NA	NA	30048016	30140876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
tx.10127	chr6	-	1813	10	FSM	ENSMUSG00000039130.19	ENSMUST00000080812.14	1824	10	7	4	-2	0	multi-exon	FALSE	canonical	1	382	junction_8	221.210865270177	272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGCTGCTAGAGAATTG	-2	True	NA	NA	False	NA	NA	NA	30391015	30366382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
tx.10128	chr6	-	2317	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	33	1135	-1	52	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	520	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGGTTTTAGTTAAAT	-2	True	NA	NA	False	NA	NA	NA	30509749	30482361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
tx.10129	chr6	-	3422	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	25	0	-24	0	multi-exon	TRUE	canonical	3	75	junction_8	9.18095855561934	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTTTGCTATTAATG	-16	True	NA	NA	False	NA	NA	NA	30693723	30653455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
tx.1013	chr10	+	2004	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	30	-3	-8	3	multi-exon	FALSE	canonical	3	276	junction_5	14.0427917452336	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGGTGCTCACTT	120	False	NA	NA	False	NA	NA	NA	77458138	77481830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
tx.10130	chr6	+	2559	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	2	0	-1	0	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTCCGGCTTCCCCTCC	-1	True	NA	NA	False	NA	NA	NA	30738050	30748461	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
tx.10131	chr6	-	3135	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-27	853	-2	5	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTTGCTATACTTGAAA	NA	False	NA	NA	False	NA	NA	NA	30873701	30748405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
tx.10132	chr6	-	402	4	NNC	ENSMUSG00000025607.16	novel	333	4	NA	NA	-6	1463	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	102.009803450453	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAGTTTTAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	30873689	30870368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_30870543_30871781_30871863_30872476_30872530_30873595
tx.10133	chr6	+	2263	17	NNC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	0	4565	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_16	168.346728788385	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTTAGTTCTGTATTTA	NA	False	NA	NA	False	NA	NA	NA	31375770	31474193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31473982
tx.10134	chr6	+	2453	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	101	8841	0	2	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTATATTTTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	31375770	31484905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
tx.10135	chr6	-	1760	7	NNC	ENSMUSG00000025608.10	novel	5379	8	NA	NA	-2694	813	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_6	18.352262954621	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCGTCTGCTTCTGC	NA	False	NA	NA	False	NA	NA	NA	31503940	31499113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31503886
tx.10136	chr6	-	1529	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	15	6	-8	1	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	295	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCATTTTCTGACTAAGA	NA	False	NA	NA	False	NA	NA	NA	33037180	32769157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
tx.10137	chr6	+	4811	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	13	0	13	0	multi-exon	FALSE	canonical	3	107	junction_11	15.4671210608191	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGTATGTTGTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	33226032	33950914	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
tx.10138	chr6	+	859	2	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGCATGTTGATTTTT	1916	False	NA	NA	False	NA	NA	NA	33975219	33976229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_33975790_33975940
tx.10139	chr6	-	2988	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	117	3148	-24	195	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTAACAGAAGAATCTGT	NA	False	NA	NA	False	NA	NA	NA	34153929	34133462	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
tx.1014	chr10	+	1235	5	ISM	ENSMUSG00000069581.13	ENSMUST00000092368.10	2169	10	-13	16117	-13	2903	5prime_fragment	FALSE	canonical	0	0	junction_2	2.95803989154981	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTCTACTTAACTCCCCA	NA	False	NA	NA	False	NA	NA	NA	77700443	77706738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_77700717_77702113_77702205_77703505_77703663_77705396_77705529_77706156
tx.10140	chr6	-	1352	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	35	0	-2	0	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	712	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	NA	False	NA	NA	False	NA	NA	NA	34294378	34280868	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
tx.10141	chr6	+	1345	10	FSM	ENSMUSG00000029762.7	ENSMUST00000038406.7	1358	10	5	8	5	-8	multi-exon	FALSE	canonical	2	5	junction_2	1.94999208608714	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACACGTTCTGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	34331058	34345390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
tx.10142	chr6	+	1335	10	FSM	ENSMUSG00000061758.14	ENSMUST00000038383.14	1371	10	37	-1	6	1	multi-exon	TRUE	canonical	3	14	junction_8	4.10960933531265	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCAACTGTCAGAATA	3043	False	NA	NA	False	NA	NA	NA	34361189	34373886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_34361343_34364606_34364775_34365710_34365828_34366989_34367068_34368951_34369075_34369323_34369431_34369849_34369932_34370992_34371077_34371661_34371745_34373546
tx.10143	chr6	+	1658	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	85	477	-64	-477	multi-exon	FALSE	canonical	3	82	junction_2	7.5	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCTCGAGTGTGTGATG	NA	False	NA	NA	False	NA	NA	NA	34453226	34482071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_34453358_34464224_34464886_34481205
tx.10144	chr6	+	734	3	ISM	ENSMUSG00000029761.17	ENSMUST00000031775.13	2142	13	-190	27743	2	3743	5prime_fragment	FALSE	canonical	3	208	junction_2	9	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGAAAAGGAAGAGG	1259	False	NA	NA	False	NA	NA	NA	34686378	34722886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_34686633_34718723_34718871_34722553
tx.10145	chr6	+	4000	12	FSM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	37	4	-11	1	multi-exon	FALSE	canonical	3	149	junction_3	28.0630930241598	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCTCGTGCATTC	1294	False	NA	NA	False	NA	NA	NA	34686413	34752404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
tx.10146	chr6	-	1482	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115007.9	3326	4	0	1844	0	11	multi-exon	FALSE	canonical	3	11	junction_1	4.92160768674447	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTATTCAATCCTGTTCA	7597	False	NA	NA	False	NA	NA	NA	34854995	34850618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_34851631_34852471_34852548_34853473_34853707_34854834
tx.10147	chr6	-	2652	15	FSM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	30	0	-4	0	multi-exon	FALSE	canonical	2	55	junction_12	11.4653426304081	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5806	False	NA	NA	False	NA	NA	NA	34887781	34857360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
tx.10148	chr6	+	1253	7	NIC	ENSMUSG00000029848.12	novel	1803	10	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	23.8607068908977	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGGTGTCCTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	34897824	34916279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_34897990_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
tx.10149	chr6	+	1506	9	FSM	ENSMUSG00000029848.12	ENSMUST00000114999.8	1455	9	-50	-1	-50	1	multi-exon	FALSE	canonical	1	14	junction_3	19.2272592950738	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTCCTGGCAG	NA	False	NA	NA	False	NA	NA	NA	34897844	34916278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_34897990_34904653_34904852_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
tx.1015	chr10	+	1695	6	NNC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.657449106199	17	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCCAGGCCCACTT	NA	False	NA	NA	False	NA	NA	NA	77814479	77821272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_77814630_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
tx.10150	chr6	+	1286	8	FSM	ENSMUSG00000029848.12	ENSMUST00000114997.3	1207	8	-78	-1	-28	1	multi-exon	FALSE	canonical	1	14	junction_2	25.1931315550691	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTCCTGGCAG	NA	False	NA	NA	False	NA	NA	NA	34897866	34916278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_34897990_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
tx.10151	chr6	-	3343	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	9	-56	0	15	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATATAGCATTGGCATT	7655	False	NA	NA	False	NA	NA	NA	35110650	35021874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
tx.10152	chr6	+	2408	15	FSM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	2	-1	2	1	multi-exon	FALSE	canonical	2	193	junction_5	41.0390555645796	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTATTCCTTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	35154552	35182589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
tx.10153	chr6	+	820	5	ISM	ENSMUSG00000038759.16	ENSMUST00000201609.4	4508	30	38770	-3	-1357	3	3prime_fragment	FALSE	canonical	3	434	junction_1	11.3660679216693	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGGTCATTCTTT	NA	False	NA	NA	False	NA	NA	NA	35220751	35224534	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
tx.10154	chr6	+	630	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	34	1857	-28	2	multi-exon	FALSE	canonical	3	978	junction_2	33.5	516	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGGTGAATTAATCCA	NA	False	NA	NA	False	NA	NA	NA	35229622	35238574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_35229718_35237344_35237399_35238093
tx.10155	chr6	-	3723	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	70	167	-19	-167	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTATAGATAACATGTTA	4218	False	NA	NA	False	NA	NA	NA	35516753	35486007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
tx.10156	chr6	+	474	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	4	1	4	0	multi-exon	FALSE	canonical	3	741	junction_1	0	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTGGTTTTTGTGTGC	9933	False	NA	NA	False	NA	NA	NA	38511761	38516383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_38511946_38516093
tx.10157	chr6	-	4149	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	4	3	combination_of_known_junctions	TRUE	canonical	3	16	junction_15	85.4180308834148	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	39354602	39311703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
tx.10158	chr6	-	4173	17	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	43	junction_14	89.544681584112	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	39354609	39311703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
tx.10159	chr6	-	4052	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-19	-3	-19	3	multi-exon	FALSE	canonical	3	160	junction_14	38.6108925098626	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	39354628	39311703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
tx.1016	chr10	-	2742	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	38	950	-33	-950	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGACAACATGACCAGAG	NA	False	NA	NA	False	NA	NA	NA	77845603	77823730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
tx.10160	chr6	-	2670	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	-1	0	-1	0	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	NA	False	NA	NA	NA	39354607	39312918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
tx.10161	chr6	-	2082	13	ISM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	4	8846	1	291	5prime_fragment	FALSE	canonical	3	160	junction_12	41.2501683498248	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACTGTATAATTAAA	NA	False	NA	NA	False	NA	NA	NA	39354605	39320552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
tx.10162	chr6	-	1831	3	ISM	ENSMUSG00000029922.16	ENSMUST00000114823.8	2992	8	19321	0	4275	0	3prime_fragment	FALSE	canonical	3	1457	junction_1	58	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	306	False	NA	NA	False	NA	NA	NA	39377389	39374737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_39376369_39376731_39376871_39377328
tx.10163	chr6	-	2072	4	ISM	ENSMUSG00000029922.16	ENSMUST00000114823.8	2992	8	18376	0	3330	0	3prime_fragment	FALSE	canonical	3	1453	junction_3	55.6496980125579	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	NA	False	NA	NA	NA	39378334	39374737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143
tx.10164	chr6	-	3023	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	23	0	23	0	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	NA	False	NA	NA	NA	39397373	39374737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
tx.10165	chr6	-	904	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	-153	0	11	0	multi-exon	FALSE	canonical	3	4055	junction_2	144.5	459	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCCGAATGCTGTCCC	NA	False	NA	NA	False	NA	NA	NA	39397385	39382472	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_39382895_39387021_39387151_39397032
tx.10166	chr6	-	783	3	ISM	ENSMUSG00000029922.16	ENSMUST00000122996.8	1485	5	-7	4788	-7	-3	5prime_fragment	FALSE	canonical	3	157	junction_2	2093.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTCCGAATGCTGT	NA	False	NA	NA	False	NA	NA	NA	39397008	39382475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_39382895_39387021_39387151_39396773
tx.10167	chr6	+	450	4	FSM	ENSMUSG00000002416.14	ENSMUST00000135671.8	4371	4	3	3918	3	-7	multi-exon	FALSE	canonical	3	748	junction_3	834.773555456142	678	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGAGTTATGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	39569510	39576398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_39569647_39573384_39573530_39575199_39575296_39576325
tx.10168	chr6	-	641	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	90	376	-5	12	multi-exon	FALSE	canonical	3	1131	junction_2	267.5	330	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGAATGGCTGTTAGGA	NA	False	NA	NA	False	NA	NA	NA	39787832	39779113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_39779479_39782304_39782546_39787797
tx.10169	chr6	+	2214	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	317	0	2	0	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTGTAATCTAAATGCA	NA	False	NA	NA	False	NA	NA	NA	40302422	40373696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
tx.1017	chr10	-	944	6	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	19557	956	1926	-956	3prime_fragment	FALSE	canonical	3	1163	junction_2	47.9933328703061	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCACTGGGACAACATGA	1010	False	NA	NA	False	NA	NA	NA	77826084	77823736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975
tx.10170	chr6	+	637	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	56	3705	-7	0	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	463	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	40448341	40457929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
tx.10171	chr6	+	1201	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	-13	0	2	0	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	40448388	40457929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
tx.10172	chr6	+	953	8	FSM	ENSMUSG00000029864.8	ENSMUST00000031897.8	930	8	-13	-10	-13	4	multi-exon	FALSE	canonical	3	11	junction_5	4.42165358301205	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGGTCTGTATCTGCC	NA	False	NA	NA	False	NA	NA	NA	42222855	42227385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_42223028_42223483_42223566_42223744_42223874_42224417_42224519_42224667_42224704_42226312_42226430_42226772_42226867_42227163
tx.10173	chr6	-	2613	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	66	-8	7	8	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTATTAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	43643146	43321926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
tx.10174	chr6	-	2489	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	22	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGATTTATGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	47167374	47161078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr6_-_47161996_47165802
tx.10175	chr6	-	1112	4	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	9.17726659862414	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGATTTATGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	47167374	47161078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr6_-_47161996_47165802_47165943_47167177_47167209_47167350
tx.10176	chr6	-	942	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGATTTATGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	47167375	47161078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr6_-_47161996_47167350
tx.1018	chr10	+	1676	13	FSM	ENSMUSG00000000730.14	ENSMUST00000000746.12	1676	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	3.51484945149386	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCTGGTGTGGTGTGTG	5591	False	NA	NA	False	NA	NA	NA	77885675	77899456	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_77885746_77885849_77886038_77886431_77886519_77886749_77886795_77887664_77887745_77887825_77887939_77888545_77888718_77889762_77889851_77890805_77890901_77892678_77892755_77893101_77893242_77895480_77895567_77899020
tx.10180	chr6	-	651	5	ISM	ENSMUSG00000029687.17	ENSMUST00000092648.13	2115	18	43844	-267	1309	45	3prime_fragment	FALSE	canonical	3	896	junction_4	82.5450634502149	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	NA	False	NA	NA	NA	47510750	47507207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675
tx.10181	chr6	-	2463	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	63	45	combination_of_known_junctions	FALSE	canonical	3	443	junction_6	133.55213528621	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	NA	False	NA	NA	NA	47571901	47507207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
tx.10182	chr6	-	2583	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	69	135	69	45	multi-exon	TRUE	canonical	3	406	junction_7	166.792654135859	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	NA	False	NA	NA	NA	47571895	47507207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
tx.10185	chr6	-	2420	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	72	38	combination_of_known_junctions	FALSE	canonical	3	225	junction_16	191.882044849961	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	NA	False	NA	NA	NA	47571892	47507214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
tx.10186	chr6	-	2150	9	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	5122	0	5056	0	3prime_fragment	FALSE	canonical	3	1547	junction_7	259.170793107557	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	2941	False	NA	2	True	NA	NA	NA	47785242	47773074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108
tx.10187	chr6	-	2361	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	38	0	-28	0	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	8928	False	NA	NA	False	NA	NA	NA	47790326	47773074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
tx.10189	chr6	+	2674	5	FSM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	127	0	127	0	multi-exon	FALSE	canonical	3	116	junction_4	25.1445819213603	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACAGGGTGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	47897536	47909573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907644
tx.1019	chr10	+	1672	12	FSM	ENSMUSG00000000730.14	ENSMUST00000151242.8	1657	12	-15	0	-15	0	multi-exon	FALSE	canonical	2	8	junction_7	3.67029622512479	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTAGTGTTCTGGTGTGG	5693	False	NA	NA	False	NA	NA	NA	77885777	77899450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_77886038_77886431_77886519_77886749_77886795_77887664_77887745_77887825_77887939_77888545_77888718_77889762_77889851_77890805_77890901_77892678_77892755_77893101_77893242_77895480_77895567_77899020
tx.10191	chr6	-	2255	2	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-23	2173	multi-exon	FALSE	non_canonical	0	0	junction_1	0	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGCTGGAAAAATGGCT	NA	False	NA	NA	False	NA	NA	NA	48502047	48499314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr6_-_48500391_48500868
tx.10192	chr6	+	1737	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	46	6	-4	-6	multi-exon	FALSE	canonical	3	94	junction_1	1.24721912892465	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAATGTCTGGCCTCTGC	6250	False	NA	NA	False	NA	NA	NA	48514594	48518729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
tx.10193	chr6	+	2510	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	-46	1679	-46	-1679	multi-exon	FALSE	canonical	3	52	junction_2	4.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTCACTGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	48578950	48598482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_48579055_48590111_48590194_48596158
tx.10194	chr6	-	685	2	ISM	ENSMUSG00000107640.2	ENSMUST00000203998.2	767	3	2183	-123	2183	123	3prime_fragment	FALSE	canonical	3	6	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGTCCCTGTTCATT	NA	False	NA	NA	False	NA	NA	NA	48597108	48590783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_48591152_48596791
tx.10195	chr6	+	1796	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	3	-415	3	0	multi-exon	FALSE	canonical	3	46	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGTGGCATATATGTG	1292	False	NA	NA	False	NA	NA	NA	48653065	48656048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_48653189_48654375
tx.10196	chr6	+	1062	7	FSM	ENSMUSG00000023367.15	ENSMUST00000101426.11	1540	7	-26	504	-26	0	multi-exon	FALSE	canonical	1	1	junction_2	2.11476292340825	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTTGCTTTGTCACACC	NA	False	NA	NA	False	NA	NA	NA	48818419	48822299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_48818524_48819137_48819336_48819522_48819634_48820718_48820776_48820894_48821114_48821601_48821713_48822037
tx.10197	chr6	-	667	3	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_2	7	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGTGCATTACTAGTT	NA	False	NA	NA	False	NA	NA	NA	48999402	48995444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_-_48995945_48997387_48997456_48999303
tx.10198	chr6	+	2385	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	-81	1397	-12	-1397	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTGATTATTATATTG	NA	False	NA	NA	False	NA	NA	NA	49013467	49033719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
tx.10199	chr6	+	567	3	FSM	ENSMUSG00000029815.13	ENSMUST00000114500.3	2587	3	-16	2036	-16	37	multi-exon	FALSE	canonical	3	89	junction_1	380.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATGACTGAGCCATCTG	332	False	NA	NA	False	NA	NA	NA	49050765	49061649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_49051038_49059778_49059861_49061436
tx.102	chr1	-	1970	7	NIC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_6	63.3157870431134	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGTAACAAATTT	4734	False	NA	NA	False	NA	NA	NA	39616469	39590376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39616412
tx.1020	chr10	-	1371	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	7	0	-1	0	multi-exon	FALSE	canonical	3	30	junction_5	5.05799696849784	273	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCTCAGGCCTTGTG	4138	False	NA	NA	False	NA	NA	NA	78005609	77997899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
tx.10200	chr6	+	733	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	40	2046	-13	27	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTGATATGACT	335	False	NA	NA	False	NA	NA	NA	49050768	49061639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
tx.10201	chr6	-	2476	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	127	1742	-126	1163	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGTCCAATTGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	49191764	49063898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
tx.10202	chr6	-	1901	14	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	1509	1904	713	1001	3prime_fragment	FALSE	canonical	3	468	junction_8	38.3789883342713	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGGGGGTAA	NA	False	NA	NA	False	NA	NA	NA	49190382	49064060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200
tx.10204	chr6	-	972	3	ISM	ENSMUSG00000029817.12	ENSMUST00000203820.3	2090	9	18443	-3	18442	3	3prime_fragment	FALSE	canonical	3	544	junction_2	21.5	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	NA	False	NA	NA	False	NA	NA	NA	49222502	49220854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_49221666_49221801_49221870_49222409
tx.10205	chr6	-	1888	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	191.0065443905	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4590	False	NA	NA	False	NA	NA	NA	49240967	49220854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229963_49230043_49240771
tx.10206	chr6	-	2145	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-35	3	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	181.788983095786	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4555	False	NA	NA	False	NA	NA	NA	49241002	49220854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229741_49230043_49240771
tx.10207	chr6	-	1827	8	FSM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	-22	-6	-19	2	multi-exon	FALSE	canonical	3	256	junction_7	100.796420409392	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTCTCTTTATTTGAT	4571	False	NA	NA	False	NA	NA	NA	49240986	49220855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
tx.10208	chr6	-	2419	8	NIC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-19	1	intron_retention	FALSE	canonical	3	123	junction_7	139.301024799547	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGTCTCTTTATTTGA	4571	False	NA	NA	False	NA	NA	NA	49240986	49220856	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49230043_49240771
tx.10209	chr6	+	2325	3	FSM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	29	-3	-4	3	multi-exon	FALSE	canonical	3	46	junction_2	7.5	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTATTTTTGGTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	49296236	49318519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_49296415_49310844_49311232_49316759
tx.1021	chr10	-	3858	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	14	0	14	0	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTGTCTGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	78020969	78006742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
tx.10210	chr6	+	1426	7	FSM	ENSMUSG00000047115.16	ENSMUST00000060561.15	2730	7	45	1259	-39	0	multi-exon	FALSE	canonical	3	30	junction_5	5.75663867972351	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGGGTCAGATTTTTC	NA	False	NA	NA	False	NA	NA	NA	49344717	49366214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362306_49362390_49365750
tx.10211	chr6	+	1351	6	FSM	ENSMUSG00000047115.16	ENSMUST00000121903.2	1304	6	-45	-2	39	2	multi-exon	FALSE	canonical	3	8	junction_5	14.4360659460949	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGGTCAGATTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	49344711	49366216	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49365750
tx.10212	chr6	+	2664	22	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-63	5	at_least_one_novel_splicesite	TRUE	canonical	2	62	junction_6	55.816430581886	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	110	False	NA	NA	False	NA	NA	NA	49372474	49446440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
tx.10213	chr6	+	2387	20	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-62	5	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_6	56.8725064900417	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	111	False	NA	NA	False	NA	NA	NA	49372475	49446440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
tx.10214	chr6	+	3289	24	FSM	ENSMUSG00000023403.15	ENSMUST00000024171.14	3237	24	-54	2	-54	-1	multi-exon	FALSE	canonical	2	108	junction_8	52.5929548855327	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAATCATTCATATTCT	119	False	NA	NA	False	NA	NA	NA	49372483	49446433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
tx.10215	chr6	+	2470	20	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-38	5	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	54.5748107857386	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	135	False	NA	NA	False	NA	NA	NA	49372499	49446440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
tx.10216	chr6	+	1847	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	109	205	-25	-42	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCAGCCTTCTGCTGGG	NA	False	NA	NA	False	NA	NA	NA	50087337	50175362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
tx.10217	chr6	-	2248	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	-113	-2	93	0	multi-exon	FALSE	canonical	3	41	junction_4	6.09998988058258	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGGCTGTTCTATGT	8653	False	NA	NA	False	NA	NA	NA	50238862	50184380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
tx.10218	chr6	-	997	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	13	2113	13	561	multi-exon	FALSE	canonical	3	4909	junction_2	335	1650	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGTTGATCTGCAAA	NA	False	NA	NA	False	NA	NA	NA	50543505	50541655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_50542366_50542471_50542649_50543395
tx.10219	chr6	-	1743	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-105	0	7	0	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	1236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	NA	False	NA	NA	NA	51446857	51439739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
tx.1022	chr10	-	1173	5	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	559	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	391.552359206275	230	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTTCTCCCATTT	3626	False	NA	NA	False	NA	NA	NA	78241013	78236219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758
tx.10220	chr6	+	1777	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	112	0	-21	0	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	312	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	51447621	51460684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
tx.10221	chr6	+	2454	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	26	0	26	0	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	NA	NA	NA	51500906	51567659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
tx.10222	chr6	+	2446	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	22	-4	-21	4	multi-exon	FALSE	canonical	3	50	junction_1	112.931272118144	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTTTGTTCGATTTCT	NA	False	NA	NA	False	NA	NA	NA	51521524	51567654	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
tx.10223	chr6	-	1694	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTAGCCTGGTAT	838	False	NA	NA	False	NA	NA	NA	51989519	51836144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
tx.10225	chr6	-	1637	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	2	1743	2	1	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTAGCCTGGTAT	830	False	NA	NA	False	NA	NA	NA	51989527	51836144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
tx.10226	chr6	+	937	3	FSM	ENSMUSG00000085412.8	ENSMUST00000125374.8	391	3	-4	-542	-4	542	multi-exon	FALSE	canonical	3	144	junction_2	38	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACACAACTAAGATCCATC	774	False	NA	NA	False	NA	NA	NA	52079924	52090050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_52080017_52083750_52083877_52089331
tx.10228	chr6	+	1065	4	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	11	540	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	93.688609529417	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTACACAACTAAGATCCA	789	False	NA	NA	False	NA	NA	NA	52079939	52090048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_52080017_52083750_52083877_52088920_52089066_52089331
tx.10229	chr6	-	2286	2	FSM	ENSMUSG00000029844.10	ENSMUST00000000964.6	2251	2	-34	-1	-34	1	multi-exon	FALSE	canonical	3	16	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAAGCATCTTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	52135331	52132568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_52134070_52134546
tx.1023	chr10	-	1957	12	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	278.451176781927	528	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTTCTCCCATTT	NA	False	NA	NA	False	NA	NA	NA	78248846	78236219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
tx.10232	chr6	+	411	2	FSM	ENSMUSG00000087658.3	ENSMUST00000159006.2	253	2	-111	-47	-19	47	multi-exon	FALSE	canonical	3	38	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGTTATTGACCTAGAAAC	NA	False	NA	NA	False	NA	NA	NA	52135392	52139047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_52135667_52138910
tx.10233	chr6	+	702	2	FSM	ENSMUSG00000087626.2	ENSMUST00000133723.2	552	2	-150	0	-150	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAAAGTCTCTTATTTA	NA	False	NA	NA	False	NA	NA	NA	52149710	52151039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_52149989_52150615
tx.10234	chr6	-	2053	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	-41	-3	-41	3	multi-exon	FALSE	canonical	2	12	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACACGGACTGCTTTATC	9913	False	NA	NA	False	NA	NA	NA	52194526	52191474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_52193011_52194009
tx.10236	chr6	-	987	2	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCCCAGAGGTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	52423129	52410865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_-_52411647_52422923
tx.10237	chr6	-	1785	8	FSM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	38	2	-36	-2	multi-exon	FALSE	canonical	3	833	junction_5	85.7178570684555	174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGAGCTTTTTGTT	2877	False	NA	NA	False	NA	NA	NA	52617336	52523214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
tx.10238	chr6	+	3271	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	14	0	-7	0	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	NA	NA	NA	52690727	52743765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
tx.10239	chr6	+	1606	7	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	32938	5	5790	-5	3prime_fragment	FALSE	canonical	3	527	junction_1	35.6728966521581	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGACCTTTGTAAATG	2240	False	NA	NA	False	NA	NA	NA	52723651	52743760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
tx.1024	chr10	+	570	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	33	0	33	0	multi-exon	TRUE	canonical	3	3631	junction_2	117.5	1905	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTCCTTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	78261535	78263456	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_78261692_78262760_78262863_78263144
tx.10241	chr6	+	641	5	NNC	ENSMUSG00000108175.2	novel	2065	5	NA	NA	26204	-9170	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	6.80073525436772	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTTGTTCTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	53821931	53835998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_53822096_53828082_53828119_53834180_53834359_53835502_53835591_53835823
tx.10242	chr6	-	1508	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	86	3216	86	2	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGTGTCTAAATGTTC	NA	False	NA	NA	False	NA	NA	NA	54543388	54486090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
tx.10243	chr6	-	2711	4	FSM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	-18	1	-18	0	multi-exon	FALSE	canonical	3	17	junction_2	2.16024689946929	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTTGTACATGTGCAT	NA	False	NA	NA	False	NA	NA	NA	54570180	54554589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_54556672_54562787_54562916_54566257_54566410_54569831
tx.10244	chr6	+	1374	12	ISM	ENSMUSG00000005225.16	ENSMUST00000101385.3	1838	14	12149	0	12149	0	3prime_fragment	FALSE	canonical	1	70	junction_1	63.1207684122958	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCCCTAGTTAATTT	NA	False	NA	NA	False	NA	NA	NA	54592280	54618018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
tx.10245	chr6	+	1432	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	65	3806	65	-1096	multi-exon	TRUE	canonical	3	54	junction_2	0.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGCTCCCAGTGAGTTA	NA	False	NA	NA	False	NA	NA	NA	54658673	54677030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_54658917_54665990_54666114_54675964
tx.10246	chr6	+	1676	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	7344	-3766	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	273.671792481432	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTAATGGTTAAGAATAC	NA	False	NA	NA	False	NA	NA	NA	54801776	54866719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_54801890_54840884_54840981_54855333_54855440_54861749_54861832_54865440
tx.10247	chr6	-	542	3	ISM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	3488	3067	3162	1	3prime_fragment	FALSE	canonical	3	101	junction_2	32	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCGTGGGTTCTCCTG	6188	False	NA	NA	False	NA	NA	NA	54966447	54962631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_54962987_54963817_54963954_54966396
tx.10248	chr6	-	744	4	FSM	ENSMUSG00000002797.10	ENSMUST00000204301.3	431	4	-28	-285	-26	1	multi-exon	FALSE	canonical	3	46	junction_2	52.7320269538984	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCGTGGGTTCTCCTG	2761	False	NA	NA	False	NA	NA	NA	54969874	54962631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_54962987_54963817_54963954_54966484_54966543_54969679
tx.10249	chr6	-	877	4	FSM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	16	3067	16	1	multi-exon	FALSE	canonical	3	101	junction_2	27.1947707391615	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCGTGGGTTCTCCTG	2716	False	NA	NA	False	NA	NA	NA	54969919	54962631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_54962987_54963817_54963954_54966396_54966543_54969679
tx.1025	chr10	-	1468	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-18	3674	-18	-3674	multi-exon	TRUE	canonical	3	285	junction_4	40.3910881259715	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGTGTCGGCGCTG	6784	False	NA	NA	False	NA	NA	NA	78300827	78276251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
tx.10250	chr6	+	873	6	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	31369	0	19281	0	3prime_fragment	FALSE	canonical	3	2758	junction_1	257.218506332651	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCTGTTGTGTTTCCAT	8321	False	NA	NA	False	NA	NA	NA	55046360	55056485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
tx.10251	chr6	-	489	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	5	0	-4	0	multi-exon	TRUE	canonical	3	1056	junction_2	222.021395365402	186	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATTTGATTTATTATG	NA	False	NA	NA	False	NA	NA	NA	56681672	56678047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
tx.10252	chr6	+	2946	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	63	0	63	0	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	NA	False	NA	NA	NA	56809106	56856343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
tx.10253	chr6	+	1361	2	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	43738	0	26464	0	3prime_fragment	FALSE	canonical	3	825	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	NA	False	NA	NA	NA	56852781	56856343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_56852818_56855018
tx.10254	chr6	-	1635	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	41	0	-1	0	multi-exon	FALSE	canonical	3	204	junction_8	16.5486970786222	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCCAGATCATAT	1245	False	NA	NA	False	NA	NA	NA	56900876	56859384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
tx.10255	chr6	-	1684	10	FSM	ENSMUSG00000029780.15	ENSMUST00000152447.9	1067	10	-73	-544	-2	-7	multi-exon	FALSE	canonical	3	11	junction_9	88.9986821930458	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAATTCTGTTGTCCAG	1244	False	NA	NA	False	NA	NA	NA	56900877	56859391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56900656
tx.10256	chr6	+	1559	11	NNC	ENSMUSG00000029798.12	novel	4767	23	NA	NA	27019	-1538	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	5.18555686498567	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTGCATTCTTAACT	5015	False	NA	NA	False	NA	NA	NA	57614829	57640079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_57614910_57623111_57623217_57624049_57624158_57629016_57629155_57631373_57631518_57634993_57635161_57636660_57636725_57637075_57637147_57639050_57639235_57639327_57639431_57639684
tx.10257	chr6	-	805	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	0	2768	0	-2768	multi-exon	FALSE	canonical	3	182	junction_1	0	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTTTGTCTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	57669063	57666328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_57666864_57668793
tx.10258	chr6	+	3066	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	403	-960	-48	3	multi-exon	TRUE	canonical	3	58	junction_1	7.80924932371864	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGGAGTCTTAATATTT	NA	False	NA	NA	False	NA	NA	NA	57680023	57716427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
tx.10259	chr6	+	3002	9	NNC	ENSMUSG00000062190.13	novel	2245	10	NA	NA	264	3	intron_retention	FALSE	canonical	1	1	junction_1	24.6361015584853	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGGAGTCTTAATATTT	NA	False	NA	NA	False	NA	NA	NA	57680335	57716427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_57680497_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
tx.1026	chr10	+	2282	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.9345521815444	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5346	False	NA	NA	False	NA	NA	NA	78410280	78420333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_78410403_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
tx.10260	chr6	+	2147	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	-29	60	-11	-60	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	58617519	58669436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
tx.10261	chr6	+	2226	17	NIC	ENSMUSG00000029802.14	novel	2178	16	NA	NA	-7	-60	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	58.2246457696395	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	58617523	58669436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_58617613_58627445_58627529_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
tx.10262	chr6	+	2980	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	27	0	27	0	multi-exon	FALSE	canonical	3	130	junction_1	0	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGACTTTTTCTGAA	NA	False	NA	NA	False	NA	NA	NA	59185881	59189018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_59186167_59186323
tx.10263	chr6	-	1149	6	FSM	ENSMUSG00000025889.14	ENSMUST00000114268.5	1280	6	135	-4	3	0	multi-exon	FALSE	canonical	2	14	junction_1	4.2614551505325	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGGTTCCTTTTAC	7709	False	NA	NA	False	NA	NA	NA	60805853	60708558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60795307_60795350_60804464_60804612_60805707
tx.10264	chr6	+	745	3	FSM	ENSMUSG00000029920.10	ENSMUST00000205118.3	600	3	-73	-72	11	0	multi-exon	FALSE	canonical	3	133	junction_2	73	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGCAGAGCATTATGGA	1712	False	NA	NA	False	NA	NA	NA	65019577	65021187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_65019715_65020189_65020430_65020819
tx.10265	chr6	+	4482	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTTGTTAATTATTGTA	1719	False	NA	NA	False	NA	NA	NA	65019584	65092582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
tx.10266	chr6	+	1040	7	NNC	ENSMUSG00000029920.10	novel	2821	10	NA	NA	-8	28	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	143.665603244324	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGTGCTGAATGTTTGG	1968	False	NA	NA	False	NA	NA	NA	65019833	65044450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65044265
tx.10267	chr6	+	712	3	FSM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	22	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	64	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGCAGAGCATTATGGA	1976	False	NA	NA	False	NA	NA	NA	65019841	65021187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_65019946_65020189_65020430_65020819
tx.10269	chr6	+	1627	11	FSM	ENSMUSG00000029913.15	ENSMUST00000031973.13	1488	11	-61	-78	-24	0	multi-exon	FALSE	canonical	2	2	junction_3	49.012753442344	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGCTCTTGACTTTCTT	NA	False	NA	NA	False	NA	NA	NA	65755947	65913360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
tx.1027	chr10	+	2521	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	39.9503024602651	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	5376	False	NA	NA	False	NA	NA	NA	78410310	78420336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
tx.10270	chr6	+	2178	15	FSM	ENSMUSG00000029913.15	ENSMUST00000031976.14	2155	15	-23	0	-23	0	multi-exon	FALSE	canonical	3	106	junction_5	23.473389188611	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGCTCTTGACTTTCTT	NA	False	NA	NA	False	NA	NA	NA	65755948	65913360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
tx.10271	chr6	-	426	2	NNC	ENSMUSG00000107479.2	novel	479	2	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCTGTGGCCATGG	NA	False	NA	NA	False	NA	NA	NA	66442731	66431175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_66431365_66442494
tx.10272	chr6	+	1824	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	-61	-38	17	9	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTGTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	66512390	66518013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
tx.10273	chr6	+	1353	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	13	6191	13	9	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTGTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	66512386	66518013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
tx.10274	chr6	+	1044	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	11	3193	11	11	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATGAAAGAACGTTGCA	NA	False	NA	NA	False	NA	NA	NA	66873391	66995141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
tx.10275	chr6	+	761	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	-24	1139	-7	18	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTATATTCTGTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	66873399	66994931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
tx.10276	chr6	+	723	3	NIC	ENSMUSG00000036402.14	novel	1155	5	NA	NA	11	18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	184.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTATATTCTGTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	66873391	66994931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_66873512_66992708_66992828_66994447
tx.10277	chr6	+	895	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	3	11	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_1	138.5	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATGAAAGAACGTTGCA	NA	False	NA	NA	False	NA	NA	NA	66873409	66995141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_66873500_66992716_66992828_66994447
tx.10278	chr6	+	1086	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	11	-349	0	5	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAAACTGAAAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	66873417	66995262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
tx.10279	chr6	+	988	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114227.8	1125	5	21	116	-4	11	multi-exon	FALSE	canonical	2	75	junction_1	125.742544510599	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATGAAAGAACGTTGCA	NA	False	NA	NA	False	NA	NA	NA	66873435	66995141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_66873500_66891436_66891495_66920808_66920862_66992708_66992828_66994447
tx.1028	chr10	+	2253	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	0	-20	0	-1	multi-exon	FALSE	canonical	3	132	junction_8	19.815990244945	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5893	False	NA	NA	False	NA	NA	NA	78410827	78420333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
tx.10280	chr6	-	1219	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	0	4	0	-4	multi-exon	FALSE	canonical	3	118	junction_1	3.77123616632825	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATTTCTCAACGTG	NA	False	NA	NA	False	NA	NA	NA	67014390	67012083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
tx.10281	chr6	+	1686	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	360	13428	1	2	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	487	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGCTTTCACTTCATT	5845	False	NA	NA	False	NA	NA	NA	67243967	67261292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
tx.10282	chr6	+	1636	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-23	4	0	1	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	811	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAAGCTTTCACTTCAT	5849	False	NA	NA	False	NA	NA	NA	67243971	67261291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
tx.10283	chr6	+	1614	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-18	-260	4	1	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	741	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAAGCTTTCACTTCAT	5853	False	NA	NA	False	NA	NA	NA	67243975	67261291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
tx.10284	chr6	+	1656	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	12	-1	7	1	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	362	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAAGCTTTCACTTCAT	5856	False	NA	NA	False	NA	NA	NA	67243978	67261291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
tx.10285	chr6	+	458	2	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	14758	4	9890	1	3prime_fragment	FALSE	canonical	3	6747	junction_1	0	644	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAAGCTTTCACTTCAT	NA	False	NA	NA	False	NA	NA	NA	67258752	67261291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_67258806_67260886
tx.10286	chr6	-	1782	9	FSM	ENSMUSG00000054474.16	ENSMUST00000160918.8	2077	9	63	232	-29	0	multi-exon	TRUE	canonical	1	2	junction_8	2.47171499166065	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGTGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	71121360	71105381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_71105837_71106195_71106348_71108631_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203_71118439_71121274
tx.10287	chr6	+	1673	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	14	0	-10	0	multi-exon	FALSE	canonical	3	170	junction_2	14.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTGTGTCAGTGCT	NA	False	NA	NA	False	NA	NA	NA	71248674	71262303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_71248825_71259134_71259302_71260947
tx.10288	chr6	+	2945	2	FSM	ENSMUSG00000073018.7	ENSMUST00000114185.4	2874	2	-71	0	-71	0	multi-exon	FALSE	canonical	3	49	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGTGATGTGATT	NA	False	NA	NA	False	NA	NA	NA	71270677	71279864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_71270843_71277084
tx.1029	chr10	+	568	3	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	79333002	79354141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_+_79333161_79339894_79340107_79353943
tx.10290	chr6	+	2557	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	94	3	-1	-3	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGTATATTATGCCT	NA	False	NA	NA	False	NA	NA	NA	71520874	71558560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
tx.10291	chr6	+	2045	2	FSM	ENSMUSG00000053119.12	ENSMUST00000128382.2	436	2	148	-1757	148	-3	multi-exon	FALSE	canonical	3	336	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGTATATTATGCCT	9484	False	NA	NA	False	NA	NA	NA	71554720	71558560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_71554830_71556624
tx.10292	chr6	-	3108	17	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	74	-4	combination_of_known_junctions	FALSE	canonical	3	172	junction_16	78.1394736592844	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	71586049	71566024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
tx.10293	chr6	-	1973	12	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	24	400	combination_of_known_junctions	TRUE	canonical	3	43	junction_2	74.9501211550523	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGGTGATTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	71609950	71588329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
tx.10294	chr6	-	789	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	24	2908	-23	258	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	287	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTAATGGCTTTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	71800770	71792888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
tx.10295	chr6	+	2742	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	429.104185911608	52	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	71808315	71852242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
tx.10296	chr6	+	2710	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	457.116069058741	30	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	71808314	71852242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
tx.10297	chr6	+	2606	13	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	567.328583998922	4	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	71808322	71852242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
tx.10298	chr6	+	2500	12	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	562.584634587882	4	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	71808323	71852242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
tx.10299	chr6	+	1550	5	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	-384	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	638.208821625023	83	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	8702	False	NA	NA	False	NA	NA	NA	71840148	71852242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
tx.103	chr1	+	1286	8	ISM	ENSMUSG00000026073.14	ENSMUST00000027243.13	1419	9	17696	6	16409	6	3prime_fragment	FALSE	canonical	1	2	junction_5	1.35526185435788	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAGAGTGACCCATGTGG	NA	False	NA	NA	False	NA	NA	NA	40141553	40164385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_40141698_40144423_40144683_40151114_40151296_40154183_40154359_40157114_40157178_40160068_40160205_40162281_40162425_40164200
tx.1030	chr10	-	1633	6	FSM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	16	5	-8	0	multi-exon	FALSE	canonical	3	49	junction_5	6.89927532426414	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	79369614	79362268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
tx.10300	chr6	-	2595	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	190	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3036	False	NA	NA	False	NA	NA	NA	71885746	71857621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
tx.10301	chr6	-	2544	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_10	186.019177230523	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3036	False	NA	NA	False	NA	NA	NA	71885746	71857621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
tx.10303	chr6	-	2154	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	-4	94	-4	-94	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTTGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	72322171	72295754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
tx.10306	chr6	+	1538	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	4	4	4	-4	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCAGTGTGTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	72332433	72336741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
tx.10307	chr6	-	1395	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	39	0	0	0	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	757	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	NA	NA	NA	72339376	72336696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
tx.10308	chr6	-	743	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	72	5	72	0	multi-exon	FALSE	canonical	3	289	junction_1	0.5	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACGAGGCGCTTTACTC	8165	False	NA	NA	False	NA	NA	NA	72367614	72362210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72362637_72365244_72365404_72367456
tx.10309	chr6	+	2897	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	29	3	-4	-3	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTACCTGGCTTATTAA	1310	False	NA	NA	False	NA	NA	NA	72391319	72407692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
tx.1031	chr10	+	1073	2	FSM	ENSMUSG00000020308.8	ENSMUST00000239401.2	1101	2	29	-1	29	0	multi-exon	FALSE	canonical	3	316	junction_1	0	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	8035	False	NA	NA	False	NA	NA	NA	79505272	79511961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79505618_79511233
tx.10310	chr6	-	2806	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	1	-3	-1	3	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	72416540	72409778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
tx.10311	chr6	-	3392	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	-2	-3	0	3	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	72416541	72409778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
tx.10312	chr6	-	3149	9	FSM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	0	-1749	0	3	multi-exon	FALSE	canonical	3	42	junction_1	259.956697115116	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	72416539	72409778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72411723_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
tx.10313	chr6	+	1208	10	FSM	ENSMUSG00000056737.15	ENSMUST00000071044.13	1247	10	34	5	34	-3	multi-exon	TRUE	canonical	3	14	junction_1	22.7389913671443	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTTCCTGTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	72521407	72539961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_72521450_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
tx.10314	chr6	+	1235	10	FSM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	159	6	0	-4	multi-exon	FALSE	canonical	3	46	junction_1	14.6439217576592	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCTTCCTGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	72526414	72539960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
tx.10315	chr6	-	2202	12	FSM	ENSMUSG00000056698.12	ENSMUST00000070990.8	2122	12	-68	-12	2	0	multi-exon	FALSE	canonical	3	36	junction_11	7.42677755109095	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTCCAAGATGAAGTT	NA	False	NA	NA	False	NA	NA	NA	72575394	72542904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
tx.10316	chr6	+	1996	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	94	937	-59	46	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTTGTTAAGTCAAGA	NA	False	NA	NA	False	NA	NA	NA	72575551	72584471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
tx.10317	chr6	+	1741	10	ISM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	2525	937	2372	46	3prime_fragment	FALSE	canonical	3	424	junction_5	53.2144508360067	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTTGTTAAGTCAAGA	NA	False	NA	NA	False	NA	NA	NA	72577982	72584471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
tx.10318	chr6	+	944	6	ISM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	6237	-107	492	46	3prime_fragment	FALSE	canonical	3	424	junction_1	63.6383532156513	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTTGTTAAGTCAAGA	NA	False	NA	NA	False	NA	NA	NA	72581847	72584471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
tx.10319	chr6	-	2562	3	ISM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	637	2041	637	-2041	3prime_fragment	FALSE	canonical	3	270	junction_1	2	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCTGTGACGCTCATG	5056	False	NA	NA	False	NA	NA	NA	72593346	72587455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_72589094_72591054_72591139_72592506
tx.1032	chr10	+	1083	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	183	0	-26	0	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	NA	False	NA	NA	NA	79518211	79524232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
tx.10320	chr6	-	1703	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	250	3060	250	-3060	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGTTCTTGCATACA	4669	False	NA	NA	False	NA	NA	NA	72593733	72588474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
tx.10321	chr6	-	717	2	ISM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	50973	-60	1094	60	3prime_fragment	FALSE	canonical	3	1196	junction_1	0	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	72825302	72819491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_72820114_72825207
tx.10322	chr6	-	1035	3	ISM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	49719	-60	-160	60	3prime_fragment	FALSE	canonical	3	1059	junction_2	68.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	72826556	72819491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_72820114_72825207_72825491_72826426
tx.10323	chr6	-	1583	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	273	1395	-3	60	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	8738	False	NA	NA	False	NA	NA	NA	72876689	72819491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
tx.10324	chr6	-	476	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	89	5	0	1	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	2793	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	NA	False	NA	NA	NA	72935382	72934334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72934636_72934895_72935008_72935319
tx.10325	chr6	+	1257	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	258	4	-12	3	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	747	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGAAGACTTTTT	2573	False	NA	NA	False	NA	NA	NA	73225622	73253890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
tx.10326	chr6	+	815	3	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	14.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTCATTATTTATAT	NA	False	NA	NA	False	NA	NA	NA	78818578	78847540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_78818671_78833904_78833986_78846898
tx.10327	chr6	-	1206	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	12	522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	269.009293519759	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGCATGTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	81942927	81938432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_81938566_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
tx.10328	chr6	-	1385	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	11	3604	11	519	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	299	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAAGTCTGCATGTCAG	NA	False	NA	NA	False	NA	NA	NA	81942928	81938435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
tx.10329	chr6	+	1763	3	FSM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	9	1	9	-1	multi-exon	FALSE	canonical	3	34	junction_1	1.5	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTCGTGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	82018612	82070079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_82018883_82048035_82048224_82068774
tx.1033	chr10	+	785	3	ISM	ENSMUSG00000020307.16	ENSMUST00000166603.2	1078	6	2699	-4	0	0	3prime_fragment	FALSE	canonical	3	1645	junction_2	77.5	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	NA	False	NA	NA	NA	79520836	79524232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_79520937_79521066_79521202_79523682
tx.10330	chr6	-	727	4	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-4	202	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	385.203842140755	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTATGTCTCCCT	NA	False	NA	NA	False	NA	NA	NA	82629855	82595770	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_82596120_82628417_82628460_82629063_82629149_82629604
tx.10331	chr6	-	1516	4	FSM	ENSMUSG00000030042.16	ENSMUST00000141138.8	890	4	-20	-606	-20	-9	multi-exon	FALSE	canonical	3	16	junction_3	458.476462500167	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCAGTCTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	82629521	82623690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629459
tx.10332	chr6	-	1605	3	ISM	ENSMUSG00000030042.16	ENSMUST00000141138.8	890	4	0	-404	0	-211	intron_retention	FALSE	canonical	3	893	junction_1	84.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACATTTGTAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	82629501	82623892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_82625018_82628417_82628460_82629063
tx.10333	chr6	-	936	4	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	16614	36	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_3	429.604727886254	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGTTGCTCAGTGA	NA	False	NA	NA	False	NA	NA	NA	82665732	82624260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82665680
tx.10334	chr6	-	1134	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	55	580	-4	35	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	640	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTTGCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	82629855	82624261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
tx.10335	chr6	-	5496	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	17	0	17	0	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTGTGTGATTGGAT	9415	False	NA	NA	False	NA	NA	NA	82751418	82702005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
tx.10336	chr6	+	1945	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	-1	1	-1	-1	multi-exon	FALSE	canonical	0	0	junction_8	176.542723818721	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	NA	False	NA	NA	NA	82923881	83007163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
tx.10337	chr6	-	1728	5	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	11.7686022959398	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCGTATGAATGAGCAC	NA	False	NA	NA	False	NA	NA	NA	83010444	83007911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_83009042_83009285_83009397_83009515_83009610_83009747_83010048_83010351
tx.10338	chr6	-	1799	5	FSM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	8	0	5	0	multi-exon	FALSE	canonical	3	30	junction_1	5.31507290636732	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCTGCGTATGAATGAG	NA	False	NA	NA	False	NA	NA	NA	83010444	83007914	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010048_83010351
tx.10339	chr6	-	1631	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	94	0	-35	0	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	507	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	1991	False	NA	NA	False	NA	NA	NA	83031458	83028246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
tx.1034	chr10	+	583	2	ISM	ENSMUSG00000020307.16	ENSMUST00000166603.2	1078	6	3031	-4	332	0	3prime_fragment	FALSE	canonical	3	1645	junction_1	0	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	NA	False	NA	NA	NA	79521168	79524232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_79521202_79523682
tx.10340	chr6	+	1404	12	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	307.048519599802	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5417	False	NA	NA	False	NA	NA	NA	83031705	83034663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_83031814_83031891_83031995_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
tx.10341	chr6	+	1451	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	192	126	-1	0	multi-exon	TRUE	canonical	3	960	junction_10	78.8006166859286	229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5405	False	NA	NA	False	NA	NA	NA	83031693	83034663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
tx.10342	chr6	+	1366	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	317.12207936872	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5421	False	NA	NA	False	NA	NA	NA	83031709	83034663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_83031814_83031891_83032030_83032109_83032192_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
tx.10343	chr6	+	1665	11	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	960	junction_9	76.9269783626005	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5417	False	NA	NA	False	NA	NA	NA	83031705	83034663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
tx.10344	chr6	+	918	9	FSM	ENSMUSG00000069678.11	ENSMUST00000165164.9	918	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	14.5408906192159	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATCTTCCTTCTTAC	106	False	NA	NA	False	NA	NA	NA	83055326	83057836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
tx.10345	chr6	+	1066	8	ISM	ENSMUSG00000069678.11	ENSMUST00000092614.9	866	9	224	-8	-16	0	3prime_fragment	FALSE	canonical	3	182	junction_2	10.5521058929254	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATCTTCCTTCTTAC	85	False	NA	NA	False	NA	NA	NA	83055594	83057836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
tx.10346	chr6	-	999	3	NIC	ENSMUSG00000087578.2	novel	891	3	NA	NA	3	185	combination_of_known_splicesites	TRUE	canonical	1	1	junction_2	2	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAAAGGCGTGCGCCAC	NA	False	NA	NA	False	NA	NA	NA	83086031	83083403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_83084172_83084723_83084788_83085864
tx.10347	chr6	+	650	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	45	0	-35	0	multi-exon	FALSE	canonical	3	747	junction_2	17.5	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7428	False	NA	NA	False	NA	NA	NA	83086065	83086920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83086185_83086294_83086408_83086502
tx.10348	chr6	-	1290	5	FSM	ENSMUSG00000030035.15	ENSMUST00000032111.11	1419	5	128	1	-25	0	multi-exon	FALSE	canonical	3	121	junction_4	18.4390889145858	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	83098412	83096025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097858_83098183
tx.10349	chr6	-	1197	4	FSM	ENSMUSG00000030035.15	ENSMUST00000113936.10	1314	4	116	1	-37	0	multi-exon	FALSE	canonical	3	41	junction_3	56.6627449623354	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	83098424	83096025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83098183
tx.1035	chr10	+	1266	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	-5	0	-5	0	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	2925	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	NA	False	NA	NA	NA	79540319	79547803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
tx.10350	chr6	-	1482	4	NIC	ENSMUSG00000030035.15	novel	1419	5	NA	NA	-70	0	intron_retention	FALSE	canonical	3	121	junction_3	19.1369334592098	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	83098457	83096025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_83097026_83097165_83097269_83097752_83097858_83098183
tx.10351	chr6	+	2293	12	NIC	ENSMUSG00000034930.17	novel	653	6	NA	NA	-183	-3	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	15.2196045821291	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	1467	False	NA	NA	False	NA	NA	NA	83119189	83129557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_83119543_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
tx.10352	chr6	+	2023	11	ISM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	8739	2	-1986	-2	3prime_fragment	FALSE	canonical	3	54	junction_8	8.87693640846886	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTCTTTCACTTGTC	1087	False	NA	NA	False	NA	NA	NA	83122829	83129558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
tx.10353	chr6	-	1188	11	FSM	ENSMUSG00000030032.15	ENSMUST00000125894.9	1216	11	28	0	10	0	multi-exon	FALSE	canonical	1	8	junction_10	9.65453261426984	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGTCTGAGCACTCAG	9910	False	NA	NA	False	NA	NA	NA	83133351	83129690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156_83133228_83133296
tx.10354	chr6	+	4101	28	FSM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	18	-1	-13	0	multi-exon	TRUE	canonical	3	372	junction_1	39.6793042772762	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	511	False	NA	NA	False	NA	NA	NA	83142919	83177099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
tx.10355	chr6	+	1797	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-7	284	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGTGGCCAGTGGTGGA	5719	False	NA	NA	False	NA	NA	NA	83254367	83280742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
tx.10356	chr6	+	2317	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40006	783	-12	685	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	119	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCTGAGTGGATT	5714	False	NA	NA	False	NA	NA	NA	83254362	83281143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
tx.10357	chr6	+	1105	8	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	51912	1187	1652	281	3prime_fragment	FALSE	canonical	3	410	junction_5	38.841908778419	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAAGTGGCCAGTGGT	NA	False	NA	NA	False	NA	NA	NA	83266268	83280739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
tx.10358	chr6	-	2013	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	9	63	9	-63	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	1144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGTTTTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	83294579	83282735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
tx.10359	chr6	+	4308	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	24	80	4	-79	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGAAGTGTGTTAAC	NA	False	NA	NA	False	NA	NA	NA	83303021	83320678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
tx.1036	chr10	+	747	3	ISM	ENSMUSG00000023175.16	ENSMUST00000180235.2	836	4	570	-259	570	0	3prime_fragment	FALSE	canonical	3	6175	junction_1	150	1623	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	NA	False	NA	NA	NA	79546508	79547803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_79546755_79547089_79547115_79547327
tx.10360	chr6	+	542	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	30	1740	-15	0	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGCCATGCTTCAGG	379	False	NA	NA	False	NA	NA	NA	83326457	83335378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
tx.10361	chr6	-	1559	3	ISM	ENSMUSG00000034832.16	ENSMUST00000056191.2	2523	4	3	5010	0	1042	5prime_fragment	FALSE	canonical	2	3	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCCCCCACCCCTGCTG	NA	False	NA	NA	False	NA	NA	NA	83418657	83380430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_83381807_83418198_83418256_83418531
tx.10362	chr6	-	1055	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	52	0	-10	0	multi-exon	FALSE	canonical	3	197	junction_5	13.5369863706809	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	83483899	83457198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
tx.10363	chr6	-	948	6	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	77.3356321497406	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	83483905	83457198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83483729
tx.10364	chr6	-	2097	10	FSM	ENSMUSG00000006906.11	ENSMUST00000068054.9	2364	10	274	-7	-16	0	multi-exon	FALSE	canonical	3	22	junction_4	7.14920352984241	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGAGTGATTTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	83549437	83520198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
tx.10365	chr6	-	1381	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5442	2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	36.2724068680312	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGGCGGACTTTGCTT	2726	False	NA	NA	False	NA	NA	NA	83675083	83669785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_83670449_83671329_83671456_83672566_83672939_83673961_83674051_83674952
tx.10366	chr6	+	1277	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-35	0	-35	0	multi-exon	FALSE	canonical	3	115	junction_1	5	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTGTCCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	83688210	83715295	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83688526_83710080_83710269_83714521
tx.10367	chr6	-	1327	5	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	-15	17	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	255.470521782847	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGGCTTCTAGGCA	9752	False	NA	NA	False	NA	NA	NA	83752755	83747380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_83748286_83749223_83749292_83750691_83750846_83751999_83752080_83752635
tx.10368	chr6	-	1963	5	ISM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	63	1514	8	17	intron_retention	FALSE	canonical	3	526	junction_1	53.5397048927242	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGGCTTCTAGGCA	9775	False	NA	NA	False	NA	NA	NA	83752732	83747380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999
tx.10369	chr6	-	1436	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	33	1515	10	16	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	309	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATTGGCTTCTAGGC	9745	False	NA	NA	False	NA	NA	NA	83752762	83747381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
tx.1037	chr10	+	1992	5	FSM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	-38	1	-38	-1	multi-exon	FALSE	canonical	2	5	junction_4	2.6809513236909	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTATTTTCTGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	79613067	79618463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79613232_79614396_79614583_79615798_79616015_79616957_79617186_79617265
tx.10370	chr6	+	1198	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	207	0	-19	0	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9465	False	NA	NA	False	NA	NA	NA	83772170	83779538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
tx.10371	chr6	+	1286	10	FSM	ENSMUSG00000034744.14	ENSMUST00000146117.8	1049	10	-15	-222	-15	0	multi-exon	FALSE	canonical	3	35	junction_1	70.680816193489	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9469	False	NA	NA	False	NA	NA	NA	83772174	83779538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83772357_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
tx.10372	chr6	-	3297	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	28	657	0	-657	multi-exon	FALSE	canonical	3	74	junction_4	4.71036092035419	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCAGGTTATTGTTA	NA	False	NA	NA	False	NA	NA	NA	83808695	83783039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
tx.10373	chr6	-	731	4	FSM	ENSMUSG00000045896.15	ENSMUST00000145593.8	649	4	-32	-50	-4	50	multi-exon	FALSE	canonical	3	74	junction_3	4.98887651569859	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCACTGTATCTT	NA	False	NA	NA	False	NA	NA	NA	83808727	83786643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83787058_83791703_83791852_83808252_83808311_83808616
tx.10374	chr6	-	588	3	FSM	ENSMUSG00000033769.17	ENSMUST00000162786.2	565	3	-15	-8	12	8	multi-exon	FALSE	canonical	3	244	junction_1	24	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGAGTAGTCTGCCATA	NA	False	NA	NA	False	NA	NA	NA	85046472	84981791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_84982019_84988299_84988466_85046277
tx.10375	chr6	-	1234	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	345	junction_2	5	562	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTGTGCGTTGTCCTTC	7978	False	NA	NA	False	NA	NA	NA	85114752	85110659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_85111271_85113804_85114096_85114420
tx.10376	chr6	+	2486	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	-6	6	-6	-6	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTGCAACAATGCCTT	NA	False	NA	NA	False	NA	NA	NA	85408964	85423411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
tx.10377	chr6	-	536	2	ISM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	3715	0	3633	0	3prime_fragment	FALSE	canonical	3	155	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	85424550	85423791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_85424280_85424502
tx.10378	chr6	-	978	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	60	0	1	0	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	85428205	85423791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
tx.10379	chr6	-	1024	5	FSM	ENSMUSG00000030008.10	ENSMUST00000126805.8	953	5	57	-128	32	0	multi-exon	FALSE	canonical	3	68	junction_4	38.4991883031318	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	85428895	85423791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
tx.1038	chr10	+	2916	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	197	-3	-5	3	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1580	False	NA	NA	False	NA	NA	NA	79690457	79700269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
tx.10380	chr6	+	1848	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	505	88	0	-88	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	5440	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTTTTTCATAAA	5115	False	NA	NA	False	NA	NA	NA	85429000	85445369	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
tx.10381	chr6	-	1017	2	FSM	ENSMUSG00000057103.12	ENSMUST00000161198.4	1021	2	4	0	4	0	multi-exon	FALSE	canonical	3	9	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAATGCATGTGATGGCT	9868	False	NA	NA	False	NA	NA	NA	85892665	85887135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_85888003_85892515
tx.10382	chr6	+	2118	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	-15	0	-6	0	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTTATTATG	3403	False	NA	NA	False	NA	NA	NA	85892713	85907264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
tx.10383	chr6	+	2903	5	FSM	ENSMUSG00000054226.14	ENSMUST00000202803.4	716	5	0	-2187	0	0	multi-exon	FALSE	canonical	3	153	junction_1	23.847169643377	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTTATTATG	3409	False	NA	NA	False	NA	NA	NA	85892719	85907264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789
tx.10384	chr6	+	953	7	NIC	ENSMUSG00000054226.14	novel	2222	7	NA	NA	3	17	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	84.4801094275386	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTCTAAGCCAGGTGTG	3412	False	NA	NA	False	NA	NA	NA	85892722	85906024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_85892773_85898404_85898494_85900114_85900199_85901341_85901505_85904222_85904346_85904789_85904967_85905757
tx.10385	chr6	-	1213	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	14	5208	-11	267	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTACTGTCCTGATAT	7334	False	NA	NA	False	NA	NA	NA	85938635	85924457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
tx.10386	chr6	+	769	3	FSM	ENSMUSG00000030001.5	ENSMUST00000032070.4	759	3	-10	0	-10	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTTGCTTGGAGATGA	NA	False	NA	NA	False	NA	NA	NA	85994162	85997978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_85994440_85995560_85995714_85997639
tx.10387	chr6	+	1617	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	30	-4	30	4	multi-exon	FALSE	canonical	3	1740	junction_2	62	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTATGGGTAGTGATAT	8647	False	NA	NA	False	NA	NA	NA	86342657	86347044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_86342802_86343591_86343733_86345712
tx.10388	chr6	+	435	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	198	422	-40	-1	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	1415	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTTTCTGCTGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	86348483	86355888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
tx.10389	chr6	-	3659	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	17	619	4	-619	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTCTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	86374119	86363606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
tx.1039	chr10	+	2838	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	-5	336	-5	3	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1580	False	NA	NA	False	NA	NA	NA	79690457	79700269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
tx.10390	chr6	+	1747	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	-30	1413	1	0	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAACTTGTGCAAAGTC	9745	False	NA	NA	False	NA	NA	NA	86381264	86407754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
tx.10391	chr6	+	1774	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	71	2632	-1	1	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAACTTGTGCAAAGTCT	9752	False	NA	NA	False	NA	NA	NA	86381271	86407755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
tx.10392	chr6	+	872	3	FSM	ENSMUSG00000046679.17	ENSMUST00000203568.3	732	3	4	-144	4	144	multi-exon	FALSE	canonical	0	0	junction_1	17.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCCACGGGGCCCCTG	1472	False	NA	NA	False	NA	NA	NA	86415374	86422947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_86415466_86420708_86420958_86422415
tx.10393	chr6	+	514	2	NNC	ENSMUSG00000046679.17	novel	505	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCATTTCTCGGGTCTCA	1774	False	NA	NA	False	NA	NA	NA	86415676	86416470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_86415830_86416109
tx.10394	chr6	+	927	3	ISM	ENSMUSG00000046679.17	ENSMUST00000141972.8	2630	11	10	24423	-6	144	5prime_fragment	FALSE	canonical	3	14	junction_1	10.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCCACGGGGCCCCTG	1781	False	NA	NA	False	NA	NA	NA	86415683	86422947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_86415830_86420708_86420958_86422415
tx.10395	chr6	+	602	5	FSM	ENSMUSG00000097048.8	ENSMUST00000204047.3	594	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	43	junction_1	30.036436206714	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATTTTTAAATTTA	NA	False	NA	NA	False	NA	NA	NA	86504292	86541431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_86504416_86504872_86504957_86509174_86509290_86540413_86540520_86541257
tx.10396	chr6	-	817	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	4	64	-1	-64	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	805	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATTTGACAAATATCT	7650	False	NA	NA	False	NA	NA	NA	86661500	86652196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
tx.10397	chr6	-	1983	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	20	-1	0	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTCTGATT	4626	False	NA	NA	False	NA	NA	NA	86770546	86713821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
tx.10398	chr6	+	902	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	50	-2	-3	0	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	768	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTTCCTCTCACGAA	NA	False	NA	NA	False	NA	NA	NA	86986867	87005443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
tx.10399	chr6	+	912	2	ISM	ENSMUSG00000029992.15	ENSMUST00000150410.2	473	3	-19	2302	-15	-2302	5prime_fragment	FALSE	canonical	3	121	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAACAAAAAAAAAC	9930	False	NA	NA	False	NA	NA	NA	87019812	87028639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_87019988_87027902
tx.104	chr1	+	1386	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	33	-1	-10	0	multi-exon	FALSE	canonical	3	624	junction_3	42.3685024517034	476	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	42890425	42944843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
tx.1040	chr10	-	3208	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	-32	-226	-7	-1	multi-exon	TRUE	canonical	3	153	junction_9	18.1911617921159	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGGCTGTCACCGTGG	1805	False	NA	NA	False	NA	NA	NA	79744764	79730542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
tx.10400	chr6	-	1993	10	NIC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	-4	1	intron_retention	FALSE	canonical	3	41	junction_3	13.2030673577893	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATCTTCTGCCCTGAG	NA	False	NA	NA	False	NA	NA	NA	87649179	87606724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
tx.10401	chr6	-	1200	7	NNC	ENSMUSG00000030051.11	novel	3588	6	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	23.0072452356499	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTCTCTTATTTGA	NA	False	NA	NA	False	NA	NA	NA	87649129	87628070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_87628272_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
tx.10402	chr6	-	1224	7	ISM	ENSMUSG00000089997.3	ENSMUST00000238521.2	3678	16	6	36432	6	-36432	5prime_fragment	TRUE	canonical	3	8	junction_6	5.95585612840188	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTGTCCATCGACCCA	NA	False	NA	NA	False	NA	NA	NA	87699777	87689006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_87689250_87690283_87690357_87691104_87691249_87694858_87695064_87695769_87695958_87698819_87699089_87699675
tx.10403	chr6	-	1607	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	52	4178	1	3061	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCCTAGAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	87815728	87795428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
tx.10404	chr6	-	1664	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	47	464	0	3	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	3690	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACAGTTTGGACTTTTC	NA	False	NA	NA	False	NA	NA	NA	87828041	87820060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
tx.10405	chr6	-	1646	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	18	-3	-2	3	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	1165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACAGTTTGGACTTTTC	NA	False	NA	NA	False	NA	NA	NA	87828044	87820060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
tx.10406	chr6	+	2978	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	111	1051	-3	14	multi-exon	TRUE	canonical	0	0	junction_2	198.307183759023	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCGTCTCATCCCTATG	NA	False	NA	NA	False	NA	NA	NA	87864906	87889526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
tx.10407	chr6	+	2290	9	ISM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	16354	4	-4604	-4	3prime_fragment	FALSE	canonical	3	791	junction_1	68.3418566838801	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGGTGTCAGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	87881149	87890573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
tx.10408	chr6	+	1220	8	ISM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	17001	1051	-3957	14	3prime_fragment	FALSE	canonical	3	791	junction_2	67.1708148480197	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCGTCTCATCCCTATG	NA	False	NA	NA	False	NA	NA	NA	87881796	87889526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
tx.10409	chr6	+	1438	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	11	15	-4	-15	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	710	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCTGGCAAGAGTTCT	2975	False	NA	NA	False	NA	NA	NA	87890927	87913596	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
tx.1041	chr10	-	1819	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	79	0	0	0	multi-exon	FALSE	canonical	3	145	junction_7	14.1608831731957	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	9761	False	NA	NA	False	NA	NA	NA	79752761	79745885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
tx.10410	chr6	-	2140	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	17	2	-8	-2	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	627	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGCTGTCTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	88022235	87976089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
tx.10411	chr6	-	2231	7	NIC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	3	112	junction_6	799.58419749823	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCTGCTGTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	88022242	87976092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
tx.10412	chr6	+	2285	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	8	1340	8	577	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTGCTGTACTGAAAAA	545	False	NA	NA	False	NA	NA	NA	88061471	88080946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
tx.10413	chr6	+	3239	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	330	2	330	-2	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCTGTCGCCTGTTGA	NA	False	NA	NA	False	NA	NA	NA	88175645	88184010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
tx.10414	chr6	+	1955	2	FSM	ENSMUSG00000015053.15	ENSMUST00000203579.2	841	2	147	-1261	147	0	multi-exon	FALSE	canonical	3	167	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCCTGTTGAGTGG	NA	False	NA	NA	False	NA	NA	NA	88181573	88184014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_88181691_88182176
tx.10415	chr6	-	2123	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	25	531	0	8	multi-exon	TRUE	canonical	3	371	junction_3	47.1643108952333	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCATAGTCTGCCTGT	NA	False	NA	NA	False	NA	NA	NA	88423496	88234846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
tx.10416	chr6	-	1497	6	NIC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-10	7	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	158.228189650264	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCCATAGTCTGCCTG	NA	False	NA	NA	False	NA	NA	NA	88423531	88234847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_88235374_88258530_88258688_88332464_88332630_88335527_88335625_88353185_88353394_88423187
tx.10417	chr6	-	1021	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-6	-14467	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	202.243664919324	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCAAGCCCCAGTATGAA	NA	False	NA	NA	False	NA	NA	NA	88423502	88289554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_88289791_88332464_88332630_88335527_88335625_88353185_88353394_88423187
tx.10418	chr6	+	1641	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	28	6	28	-6	multi-exon	FALSE	canonical	3	1160	junction_1	83.5499850388975	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGTAGGTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	88442418	88474548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
tx.10419	chr6	+	1190	8	ISM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	13717	6	13399	-6	3prime_fragment	FALSE	canonical	3	1202	junction_2	74.7619350925022	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGTAGGTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	88456107	88474548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
tx.1042	chr10	-	1789	8	NIC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	6	junction_7	58.1177551991451	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9759	False	NA	NA	False	NA	NA	NA	79752763	79745887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749516_79752656
tx.10420	chr6	-	3083	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	65	24	-12	-24	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCGTCATCTTTGTA	9160	False	NA	NA	False	NA	NA	NA	88495822	88480584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
tx.10421	chr6	-	810	8	ISM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	83	5080	6	20	5prime_fragment	FALSE	canonical	3	957	junction_7	45.3287312590042	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGCCCTTCGAGAGGCAT	9178	False	NA	NA	False	NA	NA	NA	88495804	88485640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
tx.10422	chr6	-	1133	5	FSM	ENSMUSG00000030082.15	ENSMUST00000130918.8	935	5	-74	-124	-19	124	multi-exon	FALSE	canonical	3	957	junction_4	50.4548065103811	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTTAATTTTTTACATT	9153	False	NA	NA	False	NA	NA	NA	88495829	88490668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
tx.10423	chr6	-	2707	2	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTGTACACTGAAGATT	NA	False	NA	NA	False	NA	NA	NA	88670426	88644042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_-_88646658_88670334
tx.10424	chr6	+	1138	8	FSM	ENSMUSG00000033174.18	ENSMUST00000113585.9	3676	8	58	2480	0	6	multi-exon	FALSE	canonical	2	10	junction_6	2.55550625999976	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAGTACCCTAGTGCAA	NA	False	NA	NA	False	NA	NA	NA	88701451	88802862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_88701554_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
tx.10425	chr6	-	1544	8	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	2315	0	4	0	3prime_fragment	FALSE	canonical	3	333	junction_3	29.2665442484229	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	9279	False	NA	NA	False	NA	NA	NA	88816567	88812895	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
tx.10426	chr6	-	1845	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_10	111.135015794021	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	6964	False	NA	NA	False	NA	NA	NA	88818882	88812895	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
tx.10427	chr6	-	633	2	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	5280	2	2095	-2	3prime_fragment	FALSE	canonical	3	407	junction_1	0	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	NA	False	NA	NA	False	NA	NA	NA	88813602	88812897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_88813435_88813506
tx.10428	chr6	-	706	2	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	14336	0	7471	0	3prime_fragment	FALSE	canonical	3	3402	junction_1	0	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	NA	False	NA	NA	NA	88861426	88860455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_88861093_88861357
tx.10429	chr6	-	3271	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	100	0	-3	0	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	NA	False	NA	NA	NA	88875662	88860455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
tx.1043	chr10	+	1400	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	0	2511	0	81	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	1086	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2286	False	NA	NA	False	NA	NA	NA	79795985	79803526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
tx.10430	chr6	-	1104	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	13	4	13	-4	multi-exon	FALSE	canonical	3	184	junction_4	25.4486277245203	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGGCACCCAGTCACT	NA	False	NA	NA	False	NA	NA	NA	89572621	89360136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
tx.10431	chr6	-	1014	7	FSM	ENSMUSG00000030086.17	ENSMUST00000113550.6	1042	7	15	13	15	-8	multi-exon	FALSE	canonical	3	15	junction_3	87.7648373021147	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCATTGGCACCCAGT	NA	False	NA	NA	False	NA	NA	NA	89572619	89360140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89544568_89544714_89546324_89546395_89551349_89551573_89572440
tx.10432	chr6	-	1440	3	NNC	ENSMUSG00000092247.3	novel	399	4	NA	NA	-28	8502	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCATACTGTCTTAGATAT	NA	False	NA	NA	False	NA	NA	NA	90209827	90200207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_90201354_90202364_90202500_90209668
tx.10433	chr6	+	589	2	NNC	ENSMUSG00000108111.2	novel	661	2	NA	NA	32427	7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	18	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGTGTAATTATACAA	9381	False	NA	NA	False	NA	NA	NA	90495801	90496469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_90495862_90495940
tx.10434	chr6	+	3060	23	FSM	ENSMUSG00000030088.16	ENSMUST00000032175.11	3052	23	-8	0	-8	0	multi-exon	FALSE	canonical	3	110	junction_1	30.2788691558217	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	90527778	90576151	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
tx.10435	chr6	+	1707	12	ISM	ENSMUSG00000030088.16	ENSMUST00000204796.3	3025	23	20904	-9	4046	0	3prime_fragment	FALSE	canonical	3	182	junction_2	18.1799999090818	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	7923	False	NA	NA	False	NA	NA	NA	90548733	90576151	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
tx.10436	chr6	+	1435	6	ISM	ENSMUSG00000030089.16	ENSMUST00000032177.10	2324	10	16168	0	16168	0	3prime_fragment	FALSE	canonical	3	32	junction_4	8.27042925125413	7	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCCTCCATCCTTC	2820	False	NA	NA	False	NA	NA	NA	90612296	90623394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
tx.10437	chr6	+	1420	6	ISM	ENSMUSG00000030089.16	ENSMUST00000032177.10	2324	10	16183	0	16183	0	3prime_fragment	FALSE	canonical	3	32	junction_4	8.27042925125413	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCCTCCATCCTTC	2835	False	NA	NA	False	NA	NA	NA	90612311	90623394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
tx.10438	chr6	+	488	2	FSM	ENSMUSG00000100680.2	ENSMUST00000186472.2	486	2	-2	0	-2	0	multi-exon	FALSE	canonical	2	7	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCTACACTCATTTT	NA	False	NA	NA	False	NA	NA	NA	91417966	91418737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_91418141_91418423
tx.10439	chr6	-	1333	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	35	2104	35	-2104	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	896	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGGCTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	91450493	91441257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_91442296_91444664_91444764_91450297
tx.1044	chr10	+	1768	7	FSM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	20	672	-19	-672	multi-exon	FALSE	canonical	3	82	junction_2	7.8616509433805	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTACATTCCTGAGTT	1789	False	NA	NA	False	NA	NA	NA	79824437	79831224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
tx.10440	chr6	+	2895	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	4	4	4	-4	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCAGTCGTTTGCTGT	9692	False	NA	NA	False	NA	NA	NA	91450688	91465441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
tx.10441	chr6	-	3613	16	FSM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	21	0	17	0	multi-exon	FALSE	canonical	3	81	junction_2	18.0017283120878	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGCTGCAAATTTATT	390	False	NA	NA	False	NA	NA	NA	91492849	91466286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
tx.10442	chr6	+	636	4	FSM	ENSMUSG00000034192.6	ENSMUST00000206947.2	618	4	-16	-2	-15	2	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	1544	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTTTTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	91493013	91499604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
tx.10443	chr6	+	2602	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	42	3542	0	2746	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATGCTGGGTGGAATT	NA	False	NA	NA	False	NA	NA	NA	91661075	91732505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
tx.10444	chr6	+	2205	3	FSM	ENSMUSG00000034083.17	ENSMUST00000138868.8	3980	3	-1	1776	-1	-1776	multi-exon	FALSE	canonical	3	200	junction_1	5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTCTAATACCTGTCT	NA	False	NA	NA	False	NA	NA	NA	91855032	91860192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_91855168_91857237_91857343_91858227
tx.10445	chr6	+	1736	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	16	0	-3	0	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGGAACTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	91855049	91876824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
tx.10446	chr6	-	1590	5	NNC	ENSMUSG00000014551.9	novel	6073	4	NA	NA	27	723	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	407.310922392219	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGACTCTTTAGATGCA	NA	False	NA	NA	False	NA	NA	NA	92160987	92151095	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_92152190_92152689_92152778_92155690_92155798_92158518_92158653_92160820
tx.10447	chr6	-	741	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	22	5310	22	3	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	624	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTAAGTGTGGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	92160992	92151815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
tx.10448	chr6	-	1440	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	-56	0	-56	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	92221687	92219041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_92220107_92220652_92220869_92221528
tx.10449	chr6	+	866	5	NNC	ENSMUSG00000048636.8	novel	2239	5	NA	NA	-55	-4744	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTTTTCCTTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	92793403	92815702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_92793642_92804897_92805085_92808917_92809046_92811419_92811468_92815437
tx.1045	chr10	+	1372	4	ISM	ENSMUSG00000035697.15	ENSMUST00000150022.2	2980	15	6809	-10	6809	0	3prime_fragment	FALSE	canonical	3	84	junction_1	10.6249183003395	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGATCTTGTTCTTTTGC	2699	False	NA	NA	False	NA	NA	NA	79864385	79867306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_79864718_79864806_79865018_79866122_79866211_79866565
tx.10450	chr6	+	1266	9	NIC	ENSMUSG00000045100.12	novel	1922	10	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	12.2983738762488	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGCATTCTTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	94477311	94581042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94569392_94569463_94575360_94575426_94576159_94576234_94580532
tx.10451	chr6	+	1903	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	2	17	0	-17	multi-exon	FALSE	canonical	3	22	junction_5	7.6610285226392	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTTCCTCTTTCACA	NA	False	NA	NA	False	NA	NA	NA	94477313	94581636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
tx.10452	chr6	+	4662	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	143	64	3	-64	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGTCATGTAGAATGA	NA	False	NA	NA	False	NA	NA	NA	95094863	95106707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
tx.10453	chr6	-	1689	7	ISM	ENSMUSG00000061838.8	ENSMUST00000079847.8	2518	11	103888	4	55015	-4	3prime_fragment	FALSE	canonical	3	467	junction_5	111.92519823525	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTCACAGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	95565975	95451126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918
tx.10454	chr6	-	2236	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	-6	1137	-6	-4	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	424	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTCACAGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	95695787	95451126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
tx.10455	chr6	-	2740	7	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	17560	500	7249	-500	3prime_fragment	FALSE	canonical	3	74	junction_1	10.4469559628099	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTTTGTATTTTAGT	NA	False	NA	NA	False	NA	NA	NA	97138523	97130457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328
tx.10456	chr6	-	2182	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	79	-4	0	4	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	NA	False	NA	NA	NA	97182529	97160963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
tx.10457	chr6	-	2148	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-16	333	-8	4	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	NA	False	NA	NA	NA	97182537	97160963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
tx.10458	chr6	+	1345	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	97	0	97	0	multi-exon	FALSE	canonical	3	281	junction_2	50	217	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTATATGGCACAT	8545	False	NA	NA	False	NA	NA	NA	97187746	97210276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_97187958_97206497_97206716_97209360
tx.10459	chr6	-	1994	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	-3	-1	-3	1	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGTGTAAATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	100648121	100550041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
tx.1046	chr10	-	473	3	ISM	ENSMUSG00000004667.19	ENSMUST00000143438.8	2403	4	2899	0	374	0	3prime_fragment	FALSE	canonical	3	2552	junction_2	131.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	8499	False	NA	NA	False	NA	NA	NA	79872645	79871782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_79872136_79872360_79872433_79872597
tx.10460	chr6	-	3883	11	NNC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	5	-26925	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0821280420765	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTAAATTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	100648113	100576968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_100579574_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
tx.10461	chr6	+	1918	2	ISM	ENSMUSG00000052144.9	ENSMUST00000203580.2	1948	6	13343	-388	-206	388	3prime_fragment	FALSE	canonical	3	608	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTACATTTTTATC	3725	False	NA	NA	False	NA	NA	NA	100842880	100844971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_100843045_100843217
tx.10462	chr6	+	2243	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	-27	-818	-2	-2	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	106746099	106759433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
tx.10463	chr6	+	2261	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	20	2	16	-2	multi-exon	FALSE	canonical	3	574	junction_1	132.149477392081	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	106746146	106759433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
tx.10464	chr6	+	2191	8	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	663	2	322	-2	3prime_fragment	FALSE	canonical	3	738	junction_7	88.0727899327063	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	106746789	106759433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
tx.10465	chr6	-	2091	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	-7	0	-4	0	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	False	NA	NA	False	NA	NA	NA	106777042	106757161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
tx.10466	chr6	-	2095	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	-23	0	-11	0	multi-exon	FALSE	canonical	3	47	junction_10	56.1066840937869	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	False	NA	NA	False	NA	NA	NA	106777049	106757161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
tx.10467	chr6	+	1636	2	FSM	ENSMUSG00000034639.8	ENSMUST00000049246.7	1612	2	-19	-5	-19	5	multi-exon	FALSE	canonical	1	3	junction_1	0	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGATCTTATTACTTGT	NA	False	NA	NA	False	NA	NA	NA	108041986	108054088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_108042201_108052666
tx.10468	chr6	-	591	2	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGCTTCAGAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	108189888	108189216	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_-_108189735_108189815
tx.10469	chr6	-	763	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9167	116	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	14.0779082253011	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCTTGTGTCAGTAG	NA	False	NA	NA	False	NA	NA	NA	108600123	108587177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_108587583_108589268_108589374_108590092_108590176_108590909_108590955_108599998
tx.1047	chr10	-	1073	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	75	0	-10	0	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	1521	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5590	False	NA	NA	False	NA	NA	NA	79875554	79871782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
tx.10470	chr6	-	755	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9174	116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.0656759649376	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCTTGTGTCAGTAG	NA	False	NA	NA	False	NA	NA	NA	108600130	108587177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_108587583_108589268_108589394_108590092_108590176_108590909_108590955_108600033
tx.10471	chr6	+	2958	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	3	152	3	-152	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAATGGTCTCCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	108637592	108643734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
tx.10472	chr6	+	2743	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-24	1724	-24	-1724	multi-exon	TRUE	canonical	3	458	junction_6	33.5480583972042	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTTACCTTAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	108760035	108800515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
tx.10473	chr6	+	1276	8	ISM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	16201	3584	-3757	239	3prime_fragment	FALSE	canonical	3	297	junction_1	20.9206469638908	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAAATGGGAAGCTTCGT	207	False	NA	NA	False	NA	NA	NA	108821835	108832725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
tx.10474	chr6	+	1122	7	ISM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	18016	3584	-1942	239	3prime_fragment	FALSE	canonical	3	304	junction_4	17.1269767715535	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAAATGGGAAGCTTCGT	1312	False	NA	NA	False	NA	NA	NA	108823650	108832725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
tx.10475	chr6	-	2499	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	28	50	-10	45	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCATAAAATTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	112673619	112596860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
tx.10476	chr6	-	2564	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	10	45	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCATAAAATTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	112673621	112596860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
tx.10477	chr6	-	3682	13	ISM	ENSMUSG00000030254.17	ENSMUST00000068487.12	2577	14	10	6442	10	-2	5prime_fragment	FALSE	canonical	3	29	junction_3	81.0826053410279	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTATTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	112673621	112603377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_112605486_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
tx.10478	chr6	-	3614	12	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTATTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	112673631	112603377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
tx.10479	chr6	+	727	4	NIC	ENSMUSG00000030264.15	novel	1764	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	301.439877919296	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTGTTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	113023275	113028000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_113023352_113024375_113024666_113026299_113026378_113027717
tx.1048	chr10	+	842	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	117	0	117	0	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	1160	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	772	False	NA	NA	False	NA	NA	NA	79889438	79892273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
tx.10480	chr6	+	2072	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	91	0	1	0	multi-exon	TRUE	canonical	3	600	junction_1	54.2445309298778	310	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	113023276	113045234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
tx.10481	chr6	+	2096	10	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	204.840377481867	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	113023321	113045234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
tx.10482	chr6	+	1468	7	ISM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	9575	0	-2150	0	3prime_fragment	FALSE	canonical	3	639	junction_1	37.6017139089283	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	113032760	113045234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
tx.10483	chr6	-	1160	2	FSM	ENSMUSG00000086429.10	ENSMUST00000124246.4	1181	2	21	0	2	0	multi-exon	FALSE	canonical	2	7	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGACTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	113054150	113047358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_113048397_113054028
tx.10484	chr6	-	1065	2	FSM	ENSMUSG00000086429.10	ENSMUST00000159544.3	822	2	133	-376	-9	0	multi-exon	FALSE	canonical	3	30	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGACTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	113054161	113047358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_113048397_113054134
tx.10485	chr6	+	2451	19	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	-10	2	combination_of_known_junctions	TRUE	canonical	3	24	junction_17	81.7724183026387	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCATTAGCATTTC	1958	False	NA	NA	False	NA	NA	NA	113214793	113258159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254791_113254907_113257563
tx.10486	chr6	+	2477	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	9	190	1	6	multi-exon	FALSE	canonical	3	298	junction_17	28.028204489649	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGCATTTCATCC	1977	False	NA	NA	False	NA	NA	NA	113214812	113258163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
tx.10487	chr6	+	1396	9	ISM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	28129	194	-2	2	3prime_fragment	FALSE	canonical	3	298	junction_7	32.918222537069	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCATTAGCATTTC	5041	False	NA	NA	False	NA	NA	NA	113242932	113258159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
tx.10488	chr6	+	1653	7	FSM	ENSMUSG00000030271.15	ENSMUST00000136263.4	1601	7	-48	-4	-21	0	multi-exon	FALSE	canonical	3	33	junction_2	81.0445693567572	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2287	False	NA	NA	False	NA	NA	NA	113303911	113311149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
tx.10489	chr6	+	1551	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2306	False	NA	NA	False	NA	NA	NA	113303930	113311149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
tx.1049	chr10	-	1431	6	ISM	ENSMUSG00000035673.11	ENSMUST00000218630.2	3903	32	42298	-759	16511	-20	3prime_fragment	FALSE	canonical	3	144	junction_5	16.2283702200806	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTTTTGCTTACTTTG	NA	False	NA	NA	False	NA	NA	NA	79894723	79892845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638
tx.10490	chr6	+	1407	7	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	89.2070002235749	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2317	False	NA	NA	False	NA	NA	NA	113303941	113311149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_113304324_113305325_113305441_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
tx.10491	chr6	+	1371	6	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	90.4464482442511	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2335	False	NA	NA	False	NA	NA	NA	113303959	113311149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310591_113310642_113310802
tx.10492	chr6	-	1462	12	FSM	ENSMUSG00000030272.16	ENSMUST00000032409.15	1496	12	32	2	11	-2	multi-exon	FALSE	canonical	3	50	junction_1	8.10570659096682	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCCGTTTGCTCAAATA	5825	False	NA	NA	False	NA	NA	NA	113320913	113311086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
tx.10493	chr6	-	1759	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	470	619	-37	11	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCGCAAGTTTAGTAT	NA	False	NA	NA	False	NA	NA	NA	113354374	113343604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
tx.10494	chr6	-	1965	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-48	11	intron_retention	FALSE	canonical	3	134	junction_9	97.0713114476818	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCGCAAGTTTAGTAT	NA	False	NA	NA	False	NA	NA	NA	113354526	113343604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
tx.10495	chr6	+	1424	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	51	795	19	1	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	362	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTGCTCTGTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	113355126	113366614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
tx.10496	chr6	+	1019	2	NNC	ENSMUSG00000051256.11	novel	1201	2	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_1	0	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCCTCGTGTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	113419537	113425184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_113419591_113424218
tx.10497	chr6	+	1168	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	26	7	0	-7	multi-exon	FALSE	canonical	3	705	junction_1	0	472	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCCTCGTGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	113419555	113425183	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113419759_113424218
tx.10498	chr6	+	2224	17	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	105	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	10.8137643769411	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	5861	False	NA	NA	False	NA	NA	NA	113448492	113460101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
tx.10499	chr6	+	2064	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	247	-5	121	0	multi-exon	TRUE	canonical	3	165	junction_1	17.0945085399441	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAGTCTTAACAACCCA	1704	False	NA	NA	False	NA	NA	NA	113460504	113470304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
tx.105	chr1	+	379	2	FSM	ENSMUSG00000060679.15	ENSMUST00000202358.2	687	2	308	0	308	0	multi-exon	FALSE	canonical	3	692	junction_1	0	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	42942524	42944843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_42942625_42944564
tx.1050	chr10	-	2390	18	ISM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	1677	5424	5	0	internal_fragment	FALSE	canonical	3	133	junction_10	12.4322384803871	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGGTCTCCATTCCTC	NA	False	NA	NA	False	NA	NA	NA	79938527	79898249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
tx.10500	chr6	-	1910	3	FSM	ENSMUSG00000045009.10	ENSMUST00000205170.2	1903	3	-28	21	16	11	multi-exon	FALSE	canonical	3	13	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTGTTTGTTTGG	4301	False	NA	NA	False	NA	NA	NA	113478876	113473249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_113474049_113474232_113475278_113478810
tx.10501	chr6	-	1960	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	15	10	15	-10	multi-exon	FALSE	canonical	3	306	junction_2	13.3386044002714	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGAAAGTGTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	113508598	113491844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
tx.10502	chr6	+	1956	16	ISM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	-19	42008	3	275	5prime_fragment	FALSE	canonical	3	240	junction_9	45.6515303382288	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113508645	113531226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640
tx.10503	chr6	+	2281	5	FSM	ENSMUSG00000034023.17	ENSMUST00000101051.5	2142	5	-8	-131	-8	131	multi-exon	FALSE	canonical	3	329	junction_3	30.62984655528	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAACTCTCAGGTTTA	NA	False	NA	NA	False	NA	NA	NA	113508656	113515811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884
tx.10504	chr6	+	1104	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-14	5	-14	-5	multi-exon	FALSE	canonical	3	441	junction_2	10.5	314	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCTGATGTTTATGAT	NA	False	NA	NA	False	NA	NA	NA	113581718	113593907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113581858_113592736_113592820_113593025
tx.10505	chr6	+	2752	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	40	0	40	0	multi-exon	FALSE	canonical	3	134	junction_1	12	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGTGTTGTGTTACCT	198	False	NA	NA	False	NA	NA	NA	113600959	113608594	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_113601340_113605052_113605176_113606345
tx.10506	chr6	-	1309	9	FSM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	39	5	23	-5	multi-exon	FALSE	canonical	3	942	junction_8	78.4968152220203	952	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTGTCATCCCACACA	2216	False	NA	NA	False	NA	NA	NA	113717665	113705027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
tx.10507	chr6	-	2369	12	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	5	13867	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	6.72972928120791	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGACATGGTTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	113868326	113766431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
tx.10508	chr6	+	2362	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	9	1390	-6	0	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	114620066	114836185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
tx.10509	chr6	+	2405	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	114620076	114836185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
tx.1051	chr10	+	895	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	31	5	-24	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	3034	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTCTGTTTCTAAC	4476	False	NA	NA	False	NA	NA	NA	79978179	79981647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
tx.10510	chr6	+	2545	21	FSM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	-2	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.8782759912583	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	114620087	114836185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
tx.10511	chr6	-	817	7	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-2289	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	166.976462080405	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGTCACTCTGACTG	NA	False	NA	NA	False	NA	NA	NA	115011515	114981344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011453
tx.10512	chr6	-	1158	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	7	3	7	-3	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	179	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGTCACTCTGACTG	NA	False	NA	NA	False	NA	NA	NA	115014830	114981344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
tx.10513	chr6	-	1782	4	NIC	ENSMUSG00000030316.14	novel	531	2	NA	NA	0	815	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	196.862614248843	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGCAAATGTTTC	NA	False	NA	NA	False	NA	NA	NA	115014816	115007423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_115008724_115009180_115009274_115011911_115012095_115014610
tx.10514	chr6	+	611	4	FSM	ENSMUSG00000042389.14	ENSMUST00000130425.8	638	4	27	0	-11	0	multi-exon	FALSE	canonical	3	175	junction_1	54.9201440477192	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCTCCCAGCCTTGCT	NA	False	NA	NA	False	NA	NA	NA	115521651	115531233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951
tx.10515	chr6	+	1783	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	31	292	-7	-292	multi-exon	FALSE	canonical	3	175	junction_1	38.6343314973604	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTGAGAGAATAAATG	NA	False	NA	NA	False	NA	NA	NA	115521655	115555297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
tx.10516	chr6	+	967	8	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	15415	260	-14369	-260	3prime_fragment	FALSE	canonical	3	236	junction_4	25.7452194888801	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAACATGACATCATTG	NA	False	NA	NA	False	NA	NA	NA	115537039	115555329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
tx.10517	chr6	+	2287	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	5	3938	5	-3938	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATTCCTGGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	115578867	115595647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
tx.10518	chr6	+	1326	3	ISM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	12696	3938	3304	-3938	3prime_fragment	FALSE	canonical	3	533	junction_1	1	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATTCCTGGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	115591558	115595647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_115591647_115594258_115594404_115594554
tx.10519	chr6	-	2964	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	78	28	78	0	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8222	False	NA	NA	False	NA	NA	NA	115653518	115595557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
tx.1052	chr10	+	1260	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	61	0	-1	0	multi-exon	FALSE	canonical	3	285	junction_6	33.736314097555	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	6190	False	NA	NA	False	NA	NA	NA	80003672	80007489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
tx.10520	chr6	-	719	3	ISM	ENSMUSG00000059900.15	ENSMUST00000127728.4	894	8	3843	-12	3843	0	3prime_fragment	FALSE	canonical	3	77	junction_1	0.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACTAAATATTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	115708069	115706091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_115706646_115707396_115707460_115707967
tx.10521	chr6	-	929	7	FSM	ENSMUSG00000059900.15	ENSMUST00000151849.2	927	7	400	-402	58	0	multi-exon	FALSE	canonical	3	40	junction_5	15.4344492037203	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACTAAATATTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	115711854	115706091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770
tx.10522	chr6	-	510	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	0	7	0	0	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	8023	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	115785708	115782472	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
tx.10523	chr6	-	2597	9	FSM	ENSMUSG00000030321.16	ENSMUST00000184428.6	2384	9	-50	-163	-50	-4	multi-exon	FALSE	canonical	1	3	junction_5	2.36841191518705	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGCTCGTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	115815423	115787693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_115788195_115789154_115789212_115791461_115791613_115792898_115793113_115794193_115794391_115797005_115797163_115799077_115799264_115800217_115800673_115814744
tx.10524	chr6	-	1984	8	FSM	ENSMUSG00000030322.13	ENSMUST00000032469.13	3614	8	-2	1632	-2	15	multi-exon	FALSE	canonical	0	0	junction_7	37.2010533096435	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTAGATAATGATCCTAA	7879	False	NA	NA	False	NA	NA	NA	115830334	115819289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
tx.10525	chr6	+	816	2	Genic_Genomic	ENSMUSG00000101878.2	novel	387	1	NA	NA	-107	391	multi-exon	FALSE	canonical	3	128	junction_1	0	18	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	False	NA	NA	False	NA	NA	NA	116150590	116151475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr6_+_116150893_116150961
tx.10526	chr6	+	4281	31	FSM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	9	17	1	4	multi-exon	TRUE	canonical	3	196	junction_27	51.0355975983648	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTGTTCTTACTTAAT	NA	False	NA	NA	False	NA	NA	NA	116185007	116239630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
tx.10527	chr6	+	1159	2	ISM	ENSMUSG00000042213.18	ENSMUST00000220845.2	1163	7	-47	31254	-24	-31254	5prime_fragment	FALSE	canonical	3	17	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGTGGGTGGAATTATT	NA	False	NA	NA	False	NA	NA	NA	116241158	116251577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_116241274_116250533
tx.10528	chr6	+	982	5	ISM	ENSMUSG00000042213.18	ENSMUST00000112900.9	3220	12	-18	41888	-18	-17460	5prime_fragment	FALSE	canonical	2	5	junction_4	4.43705983732471	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTTTCCATTCATTT	NA	False	NA	NA	False	NA	NA	NA	116241164	116265371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_116241274_116250533_116250834_116261700_116261777_116262814_116262883_116264942
tx.10529	chr6	+	2569	10	FSM	ENSMUSG00000042213.18	ENSMUST00000036503.14	3123	10	-49	603	-8	152	multi-exon	FALSE	canonical	2	5	junction_4	4.89393678789894	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATAATGATTTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	116241174	116306657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_116241274_116250533_116250834_116261700_116261777_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
tx.1053	chr10	+	835	8	FSM	ENSMUSG00000045193.14	ENSMUST00000054666.7	834	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	40	junction_6	141.847863313236	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGACTCTGTGGCTTGG	6190	False	NA	NA	False	NA	NA	NA	80003672	80008620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80008247_80008347_80008470
tx.10530	chr6	-	2262	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	22	903	22	3	multi-exon	FALSE	canonical	3	68	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTATCTATTTTACTTCT	NA	False	NA	NA	False	NA	NA	NA	116605938	116601879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_116604095_116605891
tx.10531	chr6	-	1402	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	108	4950	-35	1266	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTATGGCCAGCCTTGTT	8714	False	NA	NA	False	NA	NA	NA	116650805	116614918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
tx.10532	chr6	+	1160	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	-61	-1	0	0	multi-exon	FALSE	canonical	3	26	junction_1	15	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	NA	False	NA	NA	NA	117818141	117822917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_117818230_117820213_117820354_117821985
tx.10533	chr6	+	1224	3	FSM	ENSMUSG00000059689.16	ENSMUST00000136889.8	659	3	-22	-543	0	0	multi-exon	FALSE	canonical	3	25	junction_1	15.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	NA	False	NA	NA	NA	117818206	117822917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_117818359_117820213_117820354_117821985
tx.10534	chr6	+	2160	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	-10	-3	-5	0	multi-exon	TRUE	canonical	3	2150	junction_1	1335.10981654028	1432	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	3724	False	NA	NA	False	NA	NA	NA	117883745	117902583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
tx.10535	chr6	+	2177	4	FSM	ENSMUSG00000042079.14	ENSMUST00000179478.8	956	4	19	-1240	19	0	multi-exon	FALSE	canonical	3	625	junction_1	2053.14430948133	346	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	False	NA	NA	False	NA	NA	NA	117893960	117902583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
tx.10536	chr6	-	551	9	FSM	ENSMUSG00000004988.10	ENSMUST00000204214.3	550	9	0	-1	0	0	multi-exon	FALSE	canonical	1	3	junction_3	4.92442890089805	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTCTTGTGACCC	2519	False	NA	NA	False	NA	NA	NA	117914296	117910519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_117910710_117910804_117910843_117911275_117911313_117911386_117911462_117911969_117911994_117912115_117912149_117912814_117912881_117913698_117913742_117914251
tx.10537	chr6	+	3353	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-151	-975	-151	0	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	118043228	118068507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
tx.10538	chr6	-	1602	9	ISM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	23279	0	23209	0	3prime_fragment	FALSE	canonical	3	447	junction_4	27.5397440075248	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	NA	False	NA	92	True	NA	NA	NA	118373156	118360341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087
tx.10539	chr6	-	2568	14	ISM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	14456	0	14386	0	3prime_fragment	FALSE	canonical	3	339	junction_13	47.6483668545452	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	NA	False	NA	NA	False	NA	NA	NA	118381979	118360341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540
tx.1054	chr10	+	1074	5	ISM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	2237	0	-212	0	3prime_fragment	FALSE	canonical	3	285	junction_4	31.0161248385416	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	8366	False	NA	NA	False	NA	NA	NA	80005848	80007489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
tx.10540	chr6	-	4307	23	FSM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	38	0	-24	0	multi-exon	FALSE	canonical	2	285	junction_22	59.9717047606688	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	8323	False	NA	NA	False	NA	NA	NA	118396397	118360341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
tx.10541	chr6	+	1883	9	FSM	ENSMUSG00000041477.15	ENSMUST00000112777.9	3313	9	21	1409	-14	1	multi-exon	FALSE	canonical	3	31	junction_6	11.8684192291981	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTCTGGGGGTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	119152234	119197168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194763_119194941_119196963
tx.10542	chr6	+	1950	9	NNC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	15.8981130955846	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119152235	119197167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194694_119194941_119196963
tx.10543	chr6	+	863	7	NIC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	17.625738755203	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119152239	119197167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119196963
tx.10544	chr6	-	1902	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	171	2111	-58	205	multi-exon	TRUE	canonical	3	26	junction_7	32.1685611510775	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTAATTTACTGT	7496	False	NA	NA	False	NA	NA	NA	119394494	119332221	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
tx.10545	chr6	-	1473	2	ISM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	8957	1	8957	-1	3prime_fragment	FALSE	canonical	3	8	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTCTCCCTCTCCTTAT	302	False	NA	NA	False	NA	NA	NA	119417390	119409492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_119410818_119417242
tx.10546	chr6	-	2184	5	FSM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	-12	2	-12	0	multi-exon	FALSE	canonical	3	7	junction_4	2.73861278752583	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTCCCTCTCCTTA	NA	False	NA	NA	False	NA	NA	NA	119426359	119409493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119426177
tx.10547	chr6	-	2570	12	FSM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	42	-2	-10	2	multi-exon	FALSE	canonical	3	123	junction_10	52.5397920824409	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	NA	False	NA	NA	NA	120334348	120301281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
tx.10548	chr6	-	2517	12	FSM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	82	-712	-13	0	multi-exon	FALSE	canonical	3	197	junction_10	38.004349468349	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	NA	False	NA	NA	NA	120334351	120301283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
tx.10549	chr6	-	2508	11	ISM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	3374	0	3285	0	3prime_fragment	FALSE	canonical	3	123	junction_10	52.2858489459624	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	NA	False	NA	NA	NA	120331016	120301283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961
tx.1055	chr10	+	654	3	FSM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	-2	26	-2	-26	multi-exon	FALSE	canonical	3	33	junction_1	13	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGACCTCCCCCTTGAT	NA	False	NA	NA	False	NA	NA	NA	80008775	80010954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80009009_80010042_80010160_80010650
tx.10550	chr6	+	1264	6	ISM	ENSMUSG00000030180.16	ENSMUST00000135802.8	3665	21	0	36455	0	-5082	5prime_fragment	FALSE	canonical	3	44	junction_5	5.74804314527997	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTAAAATCTGTTATTC	NA	False	NA	NA	False	NA	NA	NA	120341084	120359979	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877
tx.10551	chr6	-	1929	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	NA	False	NA	NA	NA	120508281	120486454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
tx.10552	chr6	-	991	7	NNC	ENSMUSG00000058979.8	novel	1882	3	NA	NA	0	-3354	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	80.8386596183341	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTTGTTGTTGTAA	NA	False	NA	NA	False	NA	NA	NA	120508280	120489808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_120490030_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
tx.10553	chr6	-	1246	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	66	0	-35	0	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	680	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTTGTTCCTTATG	NA	False	NA	NA	False	NA	NA	NA	120799688	120772204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
tx.10554	chr6	+	3115	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-26	3836	0	-3836	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGACCTGATGTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	120813172	120865967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
tx.10555	chr6	-	1907	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	17	265	0	-265	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	120893797	120870079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
tx.10556	chr6	-	2046	7	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-4	-265	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	439.124507780348	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	120893801	120870079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120893694
tx.10557	chr6	-	1836	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-5	-265	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	358.381137896514	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	120893819	120870079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893787
tx.10558	chr6	+	1555	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8403	-756	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCCTCTTTCTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	121179251	121203057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
tx.10559	chr6	+	2256	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	257	2	-22	-2	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	841	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGGCTTTGTCGTTTGTG	2921	False	NA	NA	False	NA	NA	NA	122285935	122294637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
tx.1056	chr10	+	1751	3	ISM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	7241	0	7241	0	3prime_fragment	FALSE	canonical	3	63	junction_1	2	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGGCCTCTCTGTTACA	2901	False	NA	NA	False	NA	NA	NA	80022556	80025844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_80022900_80024275_80024342_80024502
tx.10560	chr6	+	1765	5	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	4660	2	4381	-2	3prime_fragment	FALSE	canonical	3	1209	junction_3	59.8430238206593	561	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGGCTTTGTCGTTTGTG	7324	False	NA	NA	False	NA	NA	NA	122290338	122294637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
tx.10561	chr6	-	1142	2	ISM	ENSMUSG00000040669.15	ENSMUST00000081849.10	3683	13	17467	7	15597	0	3prime_fragment	FALSE	canonical	3	1144	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	NA	False	NA	NA	False	NA	NA	NA	122296507	122294696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_122295607_122296275
tx.10562	chr6	-	3773	14	NNC	ENSMUSG00000040669.15	novel	4213	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_13	297.259673702081	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	9124	False	NA	NA	False	NA	NA	NA	122316569	122294708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
tx.10563	chr6	-	3874	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	7	12	5	0	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	9083	False	NA	NA	False	NA	NA	NA	122316610	122294708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
tx.10564	chr6	-	3137	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	26	449	-7	4	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	9115	False	NA	NA	False	NA	NA	NA	122316578	122295257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
tx.10565	chr6	-	2826	5	ISM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	0	13163	0	1659	5prime_fragment	FALSE	canonical	3	760	junction_4	137.68691840549	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTCAGAAAGAATCAAGG	9089	False	NA	NA	False	NA	NA	NA	122316604	122307971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
tx.10566	chr6	-	1970	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	4	-1227	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	64.001874972535	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCATTGACTTGTAT	9244	False	NA	NA	False	NA	NA	NA	122463460	122432445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463414
tx.10567	chr6	-	2167	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	371	2187	305	-1028	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCTTTTTCTCATTTA	9611	False	NA	NA	False	NA	NA	NA	122463093	122432246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
tx.10568	chr6	+	1249	5	ISM	ENSMUSG00000030116.15	ENSMUST00000148517.8	1506	10	8255	0	-661	0	3prime_fragment	FALSE	canonical	3	18	junction_1	53.3479146733966	28	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTCACGGGCATGTTT	7070	False	NA	NA	False	NA	NA	NA	122498796	122506249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_122498888_122501445_122501470_122502909_122502998_122503745_122503820_122505277
tx.10569	chr6	+	1214	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	336	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTCACGGGCATGTTT	8067	False	NA	NA	False	NA	NA	NA	122499793	122506249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
tx.1057	chr10	+	2409	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	244	-13	-2	13	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACAGTGTGGCTGGCAT	8462	False	NA	NA	False	NA	NA	NA	80062511	80079750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
tx.10570	chr6	-	2149	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112585.8	2127	8	-16	-6	0	-3	multi-exon	FALSE	canonical	3	36	junction_1	6.10453160549186	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGTTTGTGGTGTT	8708	False	NA	NA	False	NA	NA	NA	122579346	122554753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215
tx.10571	chr6	-	1242	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	39	844	39	-844	multi-exon	FALSE	canonical	3	704	junction_1	0	602	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTATGCTCTCTT	9886	False	NA	NA	False	NA	NA	NA	122587007	122583205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_122584095_122586654
tx.10572	chr6	+	823	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	10	0	10	0	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGACTCTTTGTAATTTA	690	False	NA	NA	False	NA	NA	NA	122603378	122607231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
tx.10573	chr6	+	2185	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	26	0	26	0	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	862	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	122684552	122691592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
tx.10574	chr6	-	3718	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	226	15	3	2	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	382	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8916	False	NA	NA	False	NA	NA	NA	122719478	122704782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
tx.10575	chr6	+	2401	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	77	-2	2	2	multi-exon	FALSE	canonical	3	520	junction_7	29.158959137102	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCATCTTTTAGT	865	False	NA	NA	False	NA	NA	NA	122851509	122865902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
tx.10576	chr6	-	3062	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	-4	15	-4	0	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	NA	False	NA	NA	NA	124392030	124373790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
tx.10577	chr6	-	3148	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	-18	9	12	-9	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAAACTGGACTGACG	NA	False	NA	NA	False	NA	NA	NA	124392014	124373799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
tx.10578	chr6	-	2414	8	ISM	ENSMUSG00000008153.13	ENSMUST00000112523.8	3703	18	12563	0	-9	0	3prime_fragment	FALSE	canonical	3	22	junction_7	10.5211157940126	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	9244	False	NA	NA	False	NA	NA	NA	124427140	124407717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732
tx.10579	chr6	+	1942	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	97	242	-48	159	multi-exon	TRUE	canonical	3	738	junction_2	58.4776785524946	216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCCAGACTGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	124640086	124681139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
tx.1058	chr10	+	755	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	4	-1	4	0	multi-exon	FALSE	canonical	3	1255	junction_1	343.259525783067	1365	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9696	False	NA	NA	False	NA	NA	NA	80085289	80092627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
tx.10580	chr6	-	1012	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	23	-1	-14	1	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	851	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTCAGACCTGATTG	NA	False	NA	NA	False	NA	NA	NA	124689118	124681342	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
tx.10581	chr6	+	1357	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	902.100985200659	1062	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	False	NA	NA	False	NA	NA	NA	124689253	124693913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
tx.10582	chr6	-	2349	15	NIC	ENSMUSG00000004266.16	novel	2219	16	NA	NA	-1	2	intron_retention	FALSE	canonical	3	99	junction_9	22.8728740508695	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCCCCTTGTATCCA	8773	False	NA	NA	False	NA	NA	NA	124710074	124697667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
tx.10583	chr6	-	2166	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	43	10	-1	3	multi-exon	FALSE	canonical	3	99	junction_10	22.1017847444248	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8773	False	NA	NA	False	NA	NA	NA	124710074	124697679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
tx.10584	chr6	-	558	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	305	0	-4	0	multi-exon	FALSE	canonical	3	807	junction_1	71.5	361	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTCAGTCATTTGT	9248	False	NA	NA	False	NA	NA	NA	124718032	124716145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_124716377_124717481_124717659_124717882
tx.10585	chr6	-	2572	11	ISM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	1322	0	-14	0	3prime_fragment	FALSE	canonical	3	37	junction_5	7.92779919019144	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGGCTGAACTAAGGAT	8701	False	NA	NA	False	NA	NA	NA	124745314	124737017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200
tx.10586	chr6	-	2342	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	147	306	-6	4	multi-exon	FALSE	canonical	3	32	junction_11	8.77449346328266	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGTCTGAGGACTCTT	10013	False	NA	NA	False	NA	NA	NA	124746489	124737323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
tx.10587	chr6	+	1220	3	FSM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	20	junction_1	6.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTATTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	124785867	124787582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_124785994_124786189_124786933_124787231
tx.10588	chr6	-	1340	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	138	123	0	-123	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	1822	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	NA	False	NA	NA	NA	124791121	124787677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
tx.10589	chr6	-	3103	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	-18	-9	-18	9	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCTGACTGGTTTCAG	7887	False	NA	NA	False	NA	NA	NA	124806416	124791991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
tx.1059	chr10	+	2025	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	56	0	24	0	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	80100873	80124242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
tx.10590	chr6	-	3050	20	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-19	9	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	192.331489002841	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCTGACTGGTTTCAG	7886	False	NA	NA	False	NA	NA	NA	124806417	124791991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803261_124803388_124806247
tx.10591	chr6	+	1718	5	FSM	ENSMUSG00000023505.14	ENSMUST00000134637.8	1917	5	-37	236	-19	-236	multi-exon	FALSE	canonical	3	695	junction_1	91.4969261778777	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAAGCTACACCGGGTC	1325	False	NA	NA	False	NA	NA	NA	124807160	124810259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_124807237_124807465_124807614_124808324_124809403_124809528_124809633_124809947
tx.10592	chr6	+	1059	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	512	405	-17	-236	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	766	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAAGCTACACCGGGTC	1327	False	NA	NA	False	NA	NA	NA	124807162	124810259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
tx.10593	chr6	-	583	2	ISM	ENSMUSG00000030124.3	ENSMUST00000032217.2	2001	8	6531	-6	4877	6	3prime_fragment	FALSE	canonical	3	14	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGTCTGTCTTTCTTG	6067	False	NA	NA	False	NA	NA	NA	124882137	124881317	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_124881564_124881800
tx.10594	chr6	-	682	3	ISM	ENSMUSG00000030122.13	ENSMUST00000181150.2	629	4	519	-368	-31	0	3prime_fragment	FALSE	canonical	3	591	junction_2	78.5	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	False	NA	-68	True	NA	NA	NA	124891668	124890643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_124891196_124891370_124891430_124891597
tx.10595	chr6	+	1506	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-30	-1	-3	1	multi-exon	FALSE	canonical	3	3449	junction_8	252.103029533562	1631	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATTCTGGCTGTACTTT	NA	False	NA	NA	False	NA	NA	NA	124908364	124913109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
tx.10596	chr6	-	1264	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	28	36	2	-36	multi-exon	FALSE	canonical	3	371	junction_1	503.213915644191	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCCTTTTGTCCAAAT	NA	False	NA	NA	False	NA	NA	NA	124942473	124935411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
tx.10597	chr6	-	1704	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	583.751379843669	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	124942232	124935778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
tx.10598	chr6	-	1762	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	383	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	124942473	124935778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
tx.10599	chr6	-	1928	7	ISM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	28	398	2	5	5prime_fragment	FALSE	canonical	3	1332	junction_6	190.502333027417	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGGGCCTCTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	124942473	124935773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
tx.106	chr1	+	3439	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	18	1	18	-1	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGCAGGCCTGTCATT	NA	False	NA	NA	False	NA	NA	NA	43137887	43155106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
tx.1060	chr10	+	498	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	2	0	2	0	multi-exon	FALSE	canonical	3	5732	junction_1	1157.99510649513	985	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6344	False	NA	NA	False	NA	NA	NA	80128288	80129948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
tx.10600	chr6	+	2162	6	FSM	ENSMUSG00000030329.12	ENSMUST00000032479.11	2250	6	88	0	-80	0	multi-exon	FALSE	canonical	3	20	junction_1	10.6094297678999	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTGCCTGTTTTGCCT	8118	False	NA	NA	False	NA	NA	NA	124973744	124980059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_124973903_124975880_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
tx.10601	chr6	+	1623	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	7	-1	-5	0	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7114	False	NA	NA	False	NA	NA	NA	125016805	125026228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
tx.10602	chr6	+	1263	5	FSM	ENSMUSG00000072770.10	ENSMUST00000112414.8	1498	5	235	0	-23	0	multi-exon	FALSE	canonical	3	86	junction_4	12.3490890352285	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	125026886	125031157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452
tx.10603	chr6	+	729	4	FSM	ENSMUSG00000072770.10	ENSMUST00000112413.8	672	4	-7	-50	-7	0	multi-exon	FALSE	canonical	3	103	junction_3	6.54896090146283	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATTTTGGAGAGTATT	NA	False	NA	NA	False	NA	NA	NA	125026902	125028510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205
tx.10604	chr6	+	549	4	ISM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	130	29689	-51	376	5prime_fragment	FALSE	canonical	3	200	junction_3	2.16024689946929	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAAAGAAGCTCG	1738	False	NA	NA	False	NA	NA	NA	125073073	125077859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761
tx.10605	chr6	+	2614	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_7	206.283558885983	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5420	False	NA	NA	False	NA	NA	NA	125108854	125121716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
tx.10606	chr6	-	1400	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	22	-2	22	1	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	NA	False	NA	NA	NA	125142714	125138814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
tx.10607	chr6	-	1108	7	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	20637	0	26	0	3prime_fragment	TRUE	canonical	3	638	junction_5	33.9153357642232	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	125148027	125144969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878
tx.10608	chr6	+	829	3	FSM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	21	5	21	-5	multi-exon	FALSE	canonical	3	70	junction_1	333	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACGTCTGCCTCGTTC	NA	False	NA	NA	False	NA	NA	NA	125168784	125170516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_125169172_125169478_125169590_125170185
tx.10609	chr6	+	678	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	25	2724	25	-13	multi-exon	FALSE	canonical	3	716	junction_1	10	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCACTCTGACGTCTG	NA	False	NA	NA	False	NA	NA	NA	125169152	125170508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_125169397_125169478_125169590_125170185
tx.1061	chr10	+	195	2	ISM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	1185	-27	1185	0	3prime_fragment	FALSE	canonical	3	7729	junction_1	0	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	7719	False	NA	NA	False	NA	NA	NA	80129663	80129948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_80129711_80129800
tx.10610	chr6	-	1509	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	-5	5	-5	-5	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	613	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGGCATTTCCTCTCT	3456	False	NA	NA	False	NA	NA	NA	125263010	125255241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
tx.10611	chr6	-	2095	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	12	0	12	0	multi-exon	FALSE	canonical	3	11	junction_6	2.62936879248872	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGGTTTTATGTGG	NA	False	NA	NA	False	NA	NA	NA	125290836	125283533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
tx.10612	chr6	+	2165	10	FSM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	-10	1	-10	-1	multi-exon	TRUE	canonical	3	24	junction_1	4.54062594260057	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTGACCCTGGAAAGAGT	3766	False	NA	NA	False	NA	NA	NA	125326675	125339446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
tx.10613	chr6	-	737	2	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGATGGTGATGATGG	NA	False	NA	NA	False	NA	NA	NA	125407685	125406348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_-_125406812_125407411
tx.10614	chr6	+	464	3	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	92	junction_2	52.5	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTGTTCTTGTATCAA	NA	False	NA	NA	False	NA	NA	NA	125409636	125415348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_125409775_125409999_125410201_125415223
tx.10615	chr6	+	559	3	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	85	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTGGTGATTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	125409647	125435802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_125409775_125409999_125410201_125435571
tx.10616	chr6	+	746	4	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	73.0585761944178	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTGGTGATTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	125409581	125435802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_125409775_125409999_125410201_125415223_125415345_125435571
tx.10617	chr6	-	1194	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	34	0	34	0	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	1749	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	10000	False	NA	NA	False	NA	NA	NA	125471720	125437228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
tx.10618	chr6	+	1091	4	ISM	ENSMUSG00000001930.18	ENSMUST00000112253.6	2184	10	35355	298	-15232	-1	3prime_fragment	FALSE	canonical	3	17	junction_3	6.84754619472471	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGGAAGCCCTTATT	NA	False	NA	NA	False	NA	NA	NA	125565280	125569136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_125565597_125567141_125567265_125568112_125568225_125568596
tx.10619	chr6	-	1215	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	-3	233	-3	42	multi-exon	FALSE	canonical	3	1115	junction_7	83.3223259396904	1337	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAAGTGTCTTTCTTGAC	NA	False	NA	NA	False	NA	NA	NA	126826091	126798916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
tx.1062	chr10	-	1200	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	-5	454	-5	-454	multi-exon	FALSE	canonical	3	349	junction_1	0	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTCTCCCTTAAGCCA	8712	False	NA	NA	False	NA	NA	NA	80156376	80154541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80155382_80156016
tx.10620	chr6	-	1096	5	ISM	ENSMUSG00000030345.17	ENSMUST00000078521.7	2252	15	36434	-18	-21	18	3prime_fragment	FALSE	canonical	2	4	junction_4	3.57071421427143	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATCAGGATTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	126862368	126852964	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_126853514_126854122_126854302_126857187_126857318_126860989_126861051_126862191
tx.10621	chr6	-	1868	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	0	365	0	0	multi-exon	FALSE	canonical	3	81	junction_4	57.8721651573535	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5265	False	NA	NA	False	NA	NA	NA	126916550	126900377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
tx.10622	chr6	-	1871	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5265	False	NA	NA	False	NA	NA	NA	126916550	126900377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
tx.10623	chr6	+	2150	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	9	342	0	11	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAAATGTTTTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	126916937	126952588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
tx.10624	chr6	-	2551	5	NIC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	21	-968	combination_of_known_splicesites	FALSE	canonical	1	30	junction_1	429.308164376127	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATGGTTAGGCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	127086492	127063046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_127065266_127068146_127068225_127069583_127069706_127078811_127078850_127086398
tx.10625	chr6	-	1304	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	-3	2350	-3	415	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	554	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCAGAGTGAAGCTTCA	NA	False	NA	NA	False	NA	NA	NA	127086516	127064428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
tx.10626	chr6	+	3820	9	FSM	ENSMUSG00000037997.13	ENSMUST00000039680.7	3746	9	-96	22	7	-1	multi-exon	FALSE	canonical	3	34	junction_4	10.4403065089106	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	127430589	127471202	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
tx.10627	chr6	+	1733	7	FSM	ENSMUSG00000037997.13	ENSMUST00000112193.8	1725	7	-47	39	8	-39	multi-exon	FALSE	canonical	3	34	junction_4	10.0443461155462	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCTCTGAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	127430590	127455979	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961
tx.10628	chr6	-	1466	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	-20	-41	14	41	multi-exon	FALSE	canonical	3	88	junction_5	10.9971587239614	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAATGGTTTGAGTTTCC	6146	False	NA	NA	False	NA	NA	NA	128120543	127940828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
tx.10629	chr6	-	1525	4	NNC	ENSMUSG00000056771.8	novel	2346	2	NA	NA	-22	-1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.69967317119759	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGATGATATTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	128177608	128165984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_128166683_128167505_128167762_128176569_128176675_128177142
tx.1063	chr10	+	1937	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	190	0	-2	0	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7217	False	NA	NA	False	NA	NA	NA	80165976	80172275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
tx.10630	chr6	-	1742	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	296	1038	221	0	multi-exon	TRUE	canonical	3	52	junction_4	17.0405447474327	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGGAGCTAGTTTGGC	1653	False	NA	NA	False	NA	NA	NA	128277480	128205143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
tx.10631	chr6	-	1323	4	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	0	40	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	133.417473451652	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTGCCTCGAACTAAT	431	False	NA	NA	False	NA	NA	NA	128339874	128334282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_128335157_128336068_128336318_128339020_128339148_128339801
tx.10632	chr6	-	1155	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	-22	-25	21	20	multi-exon	FALSE	canonical	3	139	junction_2	100.5	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGTCTATGCTTATTA	452	False	NA	NA	False	NA	NA	NA	128339853	128334302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_128335157_128336068_128336318_128339801
tx.10633	chr6	-	1432	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	152	0	-21	0	multi-exon	FALSE	canonical	3	41	junction_2	149.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCTCGTGCCCATCTA	626	False	NA	NA	False	NA	NA	NA	128339679	128334322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_128335157_128336068_128336318_128339330
tx.10634	chr6	-	2310	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	10	0	-3	0	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	NA	False	NA	NA	NA	128401884	128386406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
tx.10635	chr6	-	1606	7	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	3856	0	2832	0	3prime_fragment	FALSE	canonical	3	5358	junction_6	157.124154731219	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	1923	False	NA	NA	False	NA	NA	NA	128411784	128407065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714
tx.10636	chr6	-	2196	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	21	0	21	0	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	513	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	9290	False	NA	NA	False	NA	NA	NA	128415619	128407065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
tx.10637	chr6	-	679	7	NIC	ENSMUSG00000030359.15	novel	4681	36	NA	NA	-27	-6	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	23.8799078725191	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTGGGTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	128464845	128460535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_128460690_128461826_128461869_128462520_128462624_128463080_128463150_128463855_128463947_128464365_128464497_128464756
tx.10638	chr6	+	1773	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	32	15	-8	-15	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGACTCAGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	129510154	129519294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
tx.10639	chr6	-	629	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	13	125	13	0	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	242	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	131270194	131261475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
tx.10640	chr6	-	652	2	ISM	ENSMUSG00000030189.16	ENSMUST00000203157.2	1035	3	1153	-245	1153	0	3prime_fragment	FALSE	canonical	3	3275	junction_1	0	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	8755	False	NA	NA	False	NA	NA	NA	131344828	131341817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_131342369_131344727
tx.10641	chr6	-	1298	7	ISM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	7509	0	-2427	0	3prime_fragment	FALSE	canonical	3	2076	junction_5	443.679595353824	28	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	9950	False	NA	NA	False	NA	NA	NA	131357892	131341817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838
tx.10642	chr6	+	2165	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	25	-612	-12	3	multi-exon	FALSE	canonical	3	57	junction_3	10	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGCTGGAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	134391415	134415690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
tx.10643	chr6	+	1681	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	82	1	61	-1	multi-exon	FALSE	canonical	3	52	junction_1	6.37704215656966	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTGATCTGATTCTAA	NA	False	NA	NA	False	NA	NA	NA	134617984	134688149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
tx.10644	chr6	-	1569	2	ISM	ENSMUSG00000032641.19	ENSMUST00000165392.8	1643	4	9954	14	-29	1	3prime_fragment	FALSE	canonical	3	94	junction_1	0	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCACTATTGATTATGGTT	NA	False	NA	NA	False	NA	NA	NA	134864824	134846069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_134847407_134864592
tx.10645	chr6	-	1709	3	FSM	ENSMUSG00000032641.19	ENSMUST00000215088.2	1484	3	-171	-54	-124	0	multi-exon	FALSE	canonical	3	13	junction_1	14.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACTATTGATTATGGT	NA	False	NA	NA	False	NA	NA	NA	134864919	134846070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_134847407_134863853_134863900_134864592
tx.10646	chr6	-	1648	4	FSM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	-40	2	-11	-2	multi-exon	FALSE	canonical	3	36	junction_1	18.9267594221045	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCACTATTGATTATG	NA	False	NA	NA	False	NA	NA	NA	134874861	134846072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_134847446_134864592_134864749_134874124_134874177_134874794
tx.10647	chr6	-	1609	4	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	8.64098759787715	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCACTATTGATTATG	NA	False	NA	NA	False	NA	NA	NA	134874861	134846072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_134847407_134864592_134864749_134874124_134874177_134874794
tx.10648	chr6	-	1569	2	ISM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	9997	38	-29	11	3prime_fragment	FALSE	canonical	3	36	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTAGTTTTCACTAAA	NA	False	NA	NA	False	NA	NA	NA	134864824	134846108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_134847446_134864592
tx.10649	chr6	+	437	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	3	5222	-3	1	multi-exon	FALSE	canonical	3	145	junction_1	0	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	7968	False	NA	NA	False	NA	NA	NA	134906057	134928539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_134906224_134928268
tx.1065	chr10	-	1371	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	195	0	67	0	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80235189	80228372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
tx.10650	chr6	+	429	2	FSM	ENSMUSG00000098318.8	ENSMUST00000184504.2	544	2	-27	142	-5	1	multi-exon	FALSE	canonical	3	15	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	8001	False	NA	NA	False	NA	NA	NA	134906090	134928539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_134906249_134928268
tx.10651	chr6	+	1752	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	8	4	-2	0	multi-exon	TRUE	canonical	3	485	junction_5	30.2182146373304	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGTGTGTG	6582	False	NA	NA	False	NA	NA	NA	134988582	135000735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
tx.10652	chr6	+	2090	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	135042641	135061707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
tx.10653	chr6	-	1017	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	39	2	16	-2	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGACAGTTTTAAATTA	NA	False	NA	NA	False	NA	NA	NA	135145174	135114521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
tx.10654	chr6	+	4148	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	69	4	-63	0	multi-exon	TRUE	canonical	3	64	junction_6	10.7558123821495	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACGTGTGTCCTTTTC	NA	False	NA	NA	False	NA	NA	NA	135175043	135213236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
tx.10655	chr6	+	2482	2	FSM	ENSMUSG00000030207.16	ENSMUST00000151951.3	4136	2	1656	-2	1656	2	multi-exon	FALSE	canonical	3	73	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGTGTGTCCTTTTCTC	6812	False	NA	NA	False	NA	NA	NA	135210254	135213238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_135210475_135210976
tx.10656	chr6	+	2638	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	83	0	6	0	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	135340011	135360171	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
tx.10657	chr6	-	1960	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	50	0	-5	0	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTCCTGCGTTTAGC	NA	False	NA	NA	False	NA	NA	NA	136638876	136589067	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
tx.10658	chr6	-	2667	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	72	0	-18	0	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTTTGTGTAATG	2904	False	NA	NA	False	NA	NA	NA	136805159	136790651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
tx.10659	chr6	-	1632	5	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	7660	2	641	-2	3prime_fragment	FALSE	canonical	3	1400	junction_3	130.477009469101	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCTGTGTTTGTGTAA	6845	False	NA	NA	False	NA	NA	NA	136797571	136790653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504
tx.1066	chr10	-	1465	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	49	0	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80235207	80228372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
tx.10660	chr6	-	1210	6	FSM	ENSMUSG00000030220.14	ENSMUST00000111892.8	1153	6	-66	9	-66	-9	multi-exon	FALSE	canonical	2	3	junction_5	4.60434577328853	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCCCACATTGTGAGTT	5758	False	NA	NA	False	NA	NA	NA	136918567	136900661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918435
tx.10661	chr6	-	2258	5	FSM	ENSMUSG00000030222.14	ENSMUST00000117919.8	2262	5	9	-5	9	-1	multi-exon	FALSE	canonical	3	37	junction_2	7.44983221287567	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGAATTCTTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	137146721	137031823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137146477
tx.10662	chr6	-	1827	4	ISM	ENSMUSG00000015766.15	ENSMUST00000100841.9	4151	21	80743	4	29429	-4	3prime_fragment	FALSE	canonical	3	132	junction_2	4.08248290463863	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGAATGTTTGCTTGGT	NA	False	NA	NA	False	NA	NA	NA	137467272	137454669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214
tx.10663	chr6	-	4085	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	55	427	-1	-4	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGAATGTTTGCTTGGT	4053	False	NA	NA	False	NA	NA	NA	137626228	137454669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
tx.10664	chr6	-	2555	8	ISM	ENSMUSG00000015766.15	ENSMUST00000100841.9	4151	21	61756	8	10442	-8	3prime_fragment	FALSE	canonical	3	132	junction_2	15.1886101257166	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACACCAGAATGTTTGCT	960	False	NA	NA	False	NA	NA	NA	137486259	137454673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079
tx.10665	chr6	+	1780	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	37	833	37	423	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTCTTTTTTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	137712112	137728097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
tx.10666	chr6	+	1277	8	ISM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	4295	833	4295	423	3prime_fragment	FALSE	canonical	3	757	junction_7	64.6485001483296	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTCTTTTTTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	137716370	137728097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
tx.10667	chr6	+	1743	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	-16	2	-4	-2	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	182	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	137731539	137814890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
tx.10668	chr6	-	1286	2	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGCCAGAAACTTGCT	NA	False	NA	NA	False	NA	NA	NA	140254572	140244862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_-_140246027_140254450
tx.10669	chr6	-	1048	3	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAATGAGGAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	141547016	141516707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_-_141517294_141517401_141517610_141546762
tx.1067	chr10	-	415	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	30	0	-5	0	multi-exon	FALSE	canonical	3	4161	junction_1	104.5	2206	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	False	NA	NA	False	NA	NA	NA	80242634	80238830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80238990_80239969_80240121_80242529
tx.10670	chr6	+	1728	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	1	1102	1	104	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTAATGACTCATTTG	NA	False	NA	NA	False	NA	NA	NA	142291380	142307881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
tx.10671	chr6	-	2861	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	6	522	1	223	multi-exon	TRUE	canonical	3	113	junction_14	18.9118524546197	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCGTTTCACCAATTAAGA	6186	False	NA	NA	False	NA	NA	NA	142332807	142307623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
tx.10672	chr6	+	1093	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	3	1722	3	426	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTGGAGCCAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	142332949	142347862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
tx.10673	chr6	+	1220	3	FSM	ENSMUSG00000030245.11	ENSMUST00000146508.2	367	3	-29	-824	3	824	multi-exon	FALSE	canonical	3	32	junction_1	306	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGAGGGGCTGATTAC	NA	False	NA	NA	False	NA	NA	NA	142332949	142348260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_142333096_142341913_142341996_142347268
tx.10674	chr6	+	1046	6	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	14	426	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	283.233190145505	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTGGAGCCAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	142332960	142347862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_142333096_142338055_142338148_142339653_142339729_142339832_142339901_142341913_142341996_142347268
tx.10675	chr6	-	890	5	ISM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	9321	-3	2765	0	3prime_fragment	FALSE	canonical	3	685	junction_1	46.3546114210873	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	142444348	142435974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230
tx.10676	chr6	-	1290	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	0	-3	0	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	525	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	142453669	142435974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
tx.10677	chr6	+	1717	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	43	0	-25	0	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTACTGTAAGACCT	NA	False	NA	NA	False	NA	NA	NA	142702454	142721440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
tx.10678	chr6	+	1413	7	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	7602	5	-5678	-5	3prime_fragment	FALSE	canonical	3	681	junction_6	58.9559628498726	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTTTCTGTACTGTAA	NA	False	NA	NA	False	NA	NA	NA	142710013	142721435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
tx.10679	chr6	-	2339	5	FSM	ENSMUSG00000030283.8	ENSMUST00000032421.4	8991	5	17	6635	17	52	multi-exon	FALSE	canonical	2	8	junction_4	3.11247489949718	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTAAGTCTACTTAGCA	NA	False	NA	NA	False	NA	NA	NA	142910161	142773905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_142774997_142813579_142813673_142822373_142822484_142859749_142859895_142909261
tx.1068	chr10	-	1306	2	ISM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	9	9123	9	-2721	5prime_fragment	FALSE	canonical	3	427	junction_1	0	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGAAAGACCCAGCCA	9430	False	NA	NA	False	NA	NA	NA	80397385	80385881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_80386900_80397097
tx.10680	chr6	-	526	2	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACTTTTATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	144930094	144907254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_-_144907643_144929956
tx.10681	chr6	-	2475	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	86	-5	86	5	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8571	False	NA	NA	False	NA	NA	NA	145021824	144944878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
tx.10682	chr6	+	2249	19	FSM	ENSMUSG00000030263.14	ENSMUST00000032396.13	2319	19	70	0	28	0	multi-exon	FALSE	canonical	3	14	junction_2	13.9594872380979	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTGGAACGCCTGGT	NA	False	NA	NA	False	NA	NA	NA	145067534	145120660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_145067833_145083185_145083334_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
tx.10683	chr6	+	1481	3	NNC	ENSMUSG00000040370.14	novel	1374	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	145	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	145156922	145162265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_145157127_145160909_145160998_145161076
tx.10684	chr6	+	1357	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	17	0	-2	0	multi-exon	TRUE	canonical	3	230	junction_1	45.5	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	145156898	145162265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_145156979_145160909_145160998_145161076
tx.10685	chr6	+	3587	4	FSM	ENSMUSG00000040370.14	ENSMUST00000111724.8	1618	4	9	-1978	-2	1578	multi-exon	TRUE	canonical	3	14	junction_1	142.199390528464	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTATGATTGAAACTT	NA	False	NA	NA	False	NA	NA	NA	145156909	145164243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_145156979_145160247_145160511_145160909_145160998_145161076
tx.10686	chr6	-	1419	2	ISM	ENSMUSG00000030265.15	ENSMUST00000156486.2	832	4	17914	-829	-1432	512	3prime_fragment	FALSE	canonical	3	862	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCGCTTCAAGGTTGA	NA	False	NA	NA	False	NA	NA	NA	145177982	145165193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_145166451_145177820
tx.10687	chr6	-	1775	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	134	2769	65	512	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCGCTTCAAGGTTGA	NA	False	NA	NA	False	NA	NA	NA	145195831	145165193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
tx.10688	chr6	-	1520	3	ISM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	15888	2770	-3527	511	3prime_fragment	FALSE	canonical	3	862	junction_1	24.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGTTCGCTTCAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	145180077	145165194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_145166451_145177820_145177981_145179973
tx.10689	chr6	+	1513	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	260	2	260	-2	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTGCTTCCCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	145561742	145567203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
tx.1069	chr10	-	1304	4	ISM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	3310	-2	-407	2	3prime_fragment	TRUE	canonical	3	372	junction_3	33.2565782966318	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTTGGCTCCTTTGTGG	NA	False	NA	NA	False	NA	NA	NA	80422865	80419485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348
tx.10690	chr6	-	2598	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	328	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	NA	False	NA	NA	NA	146478950	146451129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
tx.10691	chr6	-	3013	18	FSM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	46	0	-9	0	multi-exon	FALSE	canonical	3	82	junction_2	56.6296167637544	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	NA	False	NA	NA	NA	146479287	146451129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
tx.10692	chr6	+	919	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	-2	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_3	170.445005793658	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTGTGCTTTTCATGG	NA	False	NA	NA	False	NA	NA	NA	146479416	146494362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
tx.10693	chr6	+	2817	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	62	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	146479418	146500695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
tx.10694	chr6	+	2696	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	69	1	7	-1	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	146479425	146500695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
tx.10695	chr6	-	3122	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	118	1	19	-1	multi-exon	FALSE	canonical	3	689	junction_8	114.912830779186	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	NA	NA	NA	146535977	146503850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
tx.10696	chr6	+	782	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	32	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	179	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTTTGTTTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	146544076	146552100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
tx.10697	chr6	+	2320	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-26	2256	-26	0	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGATCAGTCAATGGAC	NA	False	NA	NA	False	NA	NA	NA	146626466	146678054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
tx.10698	chr6	+	2430	7	ISM	ENSMUSG00000016487.16	ENSMUST00000123902.8	5118	18	22867	0	11533	0	3prime_fragment	FALSE	canonical	3	267	junction_3	14.7271480229163	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	NA	False	NA	NA	False	NA	NA	NA	146923909	146933521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
tx.10699	chr6	+	1072	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	0	3090	0	2	multi-exon	FALSE	canonical	3	595	junction_4	51.0230040155958	304	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTGTCTTACGTCAGG	NA	False	NA	NA	False	NA	NA	NA	146944261	146972399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
tx.107	chr1	+	2207	3	ISM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	87929	-3	111	3	3prime_fragment	FALSE	canonical	3	156	junction_2	13.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTGTTTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	43572839	43609678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_43572954_43593020_43593743_43608307
tx.1070	chr10	+	1781	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	238.087285581477	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	80438703	80451618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_80438784_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
tx.10700	chr6	+	2442	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	17	0	17	0	multi-exon	FALSE	canonical	3	65	junction_1	9.07683253612673	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	147377385	147534110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
tx.10701	chr6	-	1723	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	339	2112	-13	25	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAATATTAAGCCATATT	NA	False	NA	NA	False	NA	NA	NA	148113533	148082688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
tx.10702	chr6	-	1663	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	251.358274676846	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTGTGTTACAGCCAT	NA	False	NA	NA	False	NA	NA	NA	148113522	148082707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
tx.10703	chr6	+	838	2	Genic_Genomic	ENSMUSG00000063171.5	novel	943	1	NA	NA	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGCATATGTTTC	NA	False	NA	NA	False	NA	NA	NA	148256150	148257096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr6_+_148256583_148256690
tx.10704	chr6	-	2292	12	ISM	ENSMUSG00000040029.16	ENSMUST00000048418.14	5360	25	3	30067	0	1163	5prime_fragment	TRUE	canonical	3	206	junction_11	21.4510783022807	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTATGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	148732962	148702247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
tx.10705	chr6	-	3036	18	FSM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	-83	-1	4	0	multi-exon	FALSE	canonical	3	19	junction_10	17.2566621205624	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	148797731	148743989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
tx.10706	chr6	-	668	4	NIC	ENSMUSG00000030309.17	novel	598	4	NA	NA	-21	99	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	34.4705993887867	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTTTTCTTCATTCTA	NA	False	NA	NA	False	NA	NA	NA	148797681	148789069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_148789289_148792106_148792170_148796434_148796655_148797515
tx.10707	chr6	-	2673	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	2	22	2	0	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	148847963	148822554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
tx.10708	chr6	-	1195	6	NIC	ENSMUSG00000068250.14	novel	1457	7	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	34.1607962436475	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTAGGCTTAGATTT	NA	False	NA	NA	False	NA	NA	NA	149090195	149058758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149090103
tx.10709	chr6	-	1020	7	FSM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	4	433	4	-2	multi-exon	FALSE	canonical	3	74	junction_5	14.7723465374402	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTGTCCCATATTTAT	NA	False	NA	NA	False	NA	NA	NA	149090206	149059077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
tx.1071	chr10	+	1805	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	0	-1	0	1	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	298	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	80438713	80451618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
tx.10710	chr6	+	1822	5	FSM	ENSMUSG00000032712.17	ENSMUST00000130664.8	1957	5	17	118	3	-118	multi-exon	TRUE	canonical	3	64	junction_3	55.879334283794	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATACCTACAATCCT	NA	False	NA	NA	False	NA	NA	NA	149210928	149228051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_149211403_149211819_149211876_149219132_149219207_149226229_149226299_149226902
tx.10711	chr6	+	1636	3	ISM	ENSMUSG00000032712.17	ENSMUST00000189932.7	5269	5	-18	8377	0	-118	5prime_fragment	FALSE	canonical	3	27	junction_2	92	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATACCTACAATCCT	NA	False	NA	NA	False	NA	NA	NA	149210953	149228051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_149211403_149211819_149211858_149226902
tx.10712	chr6	+	1722	4	FSM	ENSMUSG00000032712.17	ENSMUST00000190785.7	4152	4	6	2424	6	-118	multi-exon	FALSE	canonical	3	39	junction_3	71.6286720990042	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATACCTACAATCCT	NA	False	NA	NA	False	NA	NA	NA	149210959	149228051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_149211403_149211819_149211876_149219132_149219207_149226902
tx.10713	chr6	+	1709	4	NIC	ENSMUSG00000096299.4	novel	291	3	NA	NA	-38	1275	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	4.54606056566195	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTATGAATGTAATCAATG	NA	False	NA	NA	False	NA	NA	NA	149467549	149486429	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_149467693_149483509_149483637_149483827_149483889_149485051
tx.10714	chr6	+	438	3	FSM	ENSMUSG00000096299.4	ENSMUST00000203729.3	1352	3	-36	950	6	-950	multi-exon	FALSE	canonical	3	8	junction_1	5.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGGTGTCTGATTTGTG	NA	False	NA	NA	False	NA	NA	NA	149467593	149484039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_149467693_149483509_149483637_149483827
tx.10715	chr7	-	2044	5	ISM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	10530	0	5832	0	3prime_fragment	FALSE	canonical	3	250	junction_4	6.64736790015417	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	8497	False	NA	NA	False	NA	NA	NA	3208499	3204497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394
tx.10716	chr7	-	3356	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	93	0	-5	0	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9599	False	NA	NA	False	NA	NA	NA	3218936	3204497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
tx.10717	chr7	+	3095	2	Genic_Genomic	ENSMUSG00000077903.3_ENSMUSG00000077886.3_ENSMUSG00000077815.3	novel	84	1	NA	NA	-790	174	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGCTTTCTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	3266509	3269689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr7_+_3268626_3268710
tx.10718	chr7	+	2784	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	29	0	-12	0	multi-exon	FALSE	canonical	3	335	junction_1	308.5	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	259	False	NA	NA	False	NA	NA	NA	3339087	3347865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_3339156_3341727_3341816_3345237
tx.10719	chr7	+	2821	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	-6	1212	-6	-92	multi-exon	FALSE	canonical	3	270	junction_1	341	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGGAGCTTTGGGTTC	265	False	NA	NA	False	NA	NA	NA	3339093	3347746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_3339318_3341727_3341816_3345237
tx.1072	chr10	+	1409	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	2	0	2	0	multi-exon	TRUE	canonical	3	56	junction_1	0	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCGTTTGCACTCAGGT	NA	False	NA	NA	False	NA	NA	NA	80438715	80443488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80438784_80442147
tx.10720	chr7	+	2822	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-111	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	427.5	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	2679	False	NA	NA	False	NA	NA	NA	3341507	3347865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_3341614_3341727_3341816_3345237
tx.10721	chr7	+	2715	5	NNC	ENSMUSG00000078815.9	novel	1977	4	NA	NA	-603	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	7.79422863405995	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	NA	NA	NA	3472107	3484183	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_3473509_3478953_3479029_3480334_3480473_3481159_3481295_3483217
tx.10722	chr7	+	2351	4	FSM	ENSMUSG00000078815.9	ENSMUST00000183200.8	1977	4	-374	0	-374	0	multi-exon	FALSE	canonical	3	12	junction_3	6.16441400296898	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	NA	NA	NA	3472336	3484183	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_3473509_3478953_3479029_3480334_3480473_3483217
tx.10723	chr7	+	1713	4	NNC	ENSMUSG00000107985.2	novel	506	4	NA	NA	961	813	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.942809041582063	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTGTTTGTGTCTCTAG	NA	False	NA	NA	False	NA	NA	NA	3500833	3524349	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_3501205_3522491_3522628_3522801_3522957_3523298
tx.10724	chr7	+	348	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	2	165	2	-1	multi-exon	FALSE	canonical	3	2080	junction_1	661.918591839074	845	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTCTTTCGTGGGT	257	False	NA	NA	False	NA	NA	NA	3620373	3623161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
tx.10725	chr7	+	641	2	ISM	ENSMUSG00000035674.14	ENSMUST00000108644.8	351	4	-6	1899	0	510	5prime_fragment	FALSE	canonical	3	2080	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	262	False	NA	NA	False	NA	NA	NA	3620378	3621228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_3620407_3620615
tx.10726	chr7	-	1127	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	39	0	-6	0	multi-exon	FALSE	canonical	3	150	junction_1	47.3142684610044	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	NA	False	NA	NA	NA	3632889	3623322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
tx.10727	chr7	-	1399	5	NIC	ENSMUSG00000006335.17	novel	1166	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	237	junction_3	15.2704780540755	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	NA	False	NA	NA	NA	3632889	3623322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
tx.10728	chr7	-	1107	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	-16	0	-16	0	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	NA	False	NA	NA	NA	3632899	3623322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
tx.10729	chr7	+	1864	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	23	1257	16	0	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	421	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	2956	False	NA	NA	False	NA	NA	NA	3633006	3644228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
tx.1073	chr10	+	1908	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	241.678850267595	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	80438727	80451618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_80438784_80444636_80444685_80445046_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
tx.10730	chr7	+	2885	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-72	9	-10	0	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2740	False	NA	NA	False	NA	NA	NA	3648278	3664099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
tx.10731	chr7	-	908	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	370	944	370	-944	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTCACTGGGGAGGGG	9073	False	NA	NA	False	NA	NA	NA	3668469	3664040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
tx.10732	chr7	-	1534	3	ISM	ENSMUSG00000035596.15	ENSMUST00000127106.8	1964	6	6149	-4	-1441	0	3prime_fragment	FALSE	canonical	3	185	junction_2	22	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	4598	False	NA	NA	False	NA	NA	NA	3688968	3680787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_3681849_3686807_3686985_3688672
tx.10733	chr7	-	2340	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	538	0	1	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7931	False	NA	NA	False	NA	NA	NA	3695984	3680787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
tx.10734	chr7	+	1402	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	363	14	-25	-2	multi-exon	FALSE	canonical	3	289	junction_1	380.27448967818	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2148	False	NA	NA	False	NA	NA	NA	3696736	3704009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
tx.10735	chr7	+	1302	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	23	-6	23	-2	multi-exon	FALSE	canonical	3	1035	junction_3	83.107694522763	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2956	False	NA	NA	False	NA	NA	NA	3697544	3704009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
tx.10736	chr7	+	706	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	45	0	0	0	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	5967	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1309	False	NA	NA	False	NA	NA	NA	3707036	3709896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
tx.10737	chr7	+	2516	11	ISM	ENSMUSG00000030428.17	ENSMUST00000206869.2	1491	13	991	-1126	-187	18	3prime_fragment	FALSE	canonical	3	27	junction_10	13.9513440212762	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATCTCTTATCCTGGTA	6240	False	NA	NA	False	NA	NA	NA	4128478	4138364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
tx.10738	chr7	-	722	2	FSM	ENSMUSG00000063838.7	ENSMUST00000140410.2	362	2	153	-513	153	-3	multi-exon	FALSE	canonical	3	148	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	NA	False	NA	NA	False	NA	NA	NA	4167288	4154261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_4154787_4167091
tx.10739	chr7	-	886	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	136	3	136	-3	multi-exon	FALSE	canonical	3	137	junction_2	5.5	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	NA	False	NA	NA	False	NA	NA	NA	4167723	4154261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_4154787_4167091_4167187_4167457
tx.1074	chr10	+	1889	7	FSM	ENSMUSG00000113949.2	ENSMUST00000180350.3	1271	7	203	-821	203	1	multi-exon	FALSE	canonical	3	35	junction_1	236.742945453972	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	80438993	80451618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80439148_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
tx.10740	chr7	-	647	4	FSM	ENSMUSG00000064179.14	ENSMUST00000086502.5	485	4	-35	-127	-35	4	multi-exon	FALSE	canonical	3	16	junction_3	18.0800688297608	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCAGGGTTGTTATTA	7295	False	NA	NA	False	NA	NA	NA	4511059	4507657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4510686
tx.10741	chr7	-	1514	7	Fusion	ENSMUSG00000055809.8_ENSMUSG00000035458.16	novel	912	8	NA	NA	-342	0	intron_retention	FALSE	non_canonical	0	0	junction_6	10.1762250149825	5	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGTGTGTCTGCTAAC	6309	False	NA	NA	False	NA	NA	NA	4526135	4521303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525296
tx.10742	chr7	-	1509	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	210	junction_7	116.504882966775	347	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	4687980	4663513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
tx.10743	chr7	-	1512	8	FSM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	87	-6	0	6	multi-exon	FALSE	canonical	3	115	junction_7	148.934720667842	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	4687980	4663513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
tx.10744	chr7	+	2206	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-29	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	88.3026578025826	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	NA	False	NA	NA	NA	4743154	4750513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
tx.10745	chr7	+	2558	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-18	0	intron_retention	FALSE	canonical	3	456	junction_1	90.2970155675599	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	603	False	NA	NA	False	NA	NA	NA	4743133	4750513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
tx.10746	chr7	-	485	4	FSM	ENSMUSG00000051811.15	ENSMUST00000063324.14	553	4	68	0	-3	0	multi-exon	FALSE	canonical	3	648	junction_1	73.0677007226099	473	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	4756025	4754790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_4754975_4755059_4755161_4755722_4755849_4755951
tx.10747	chr7	+	833	4	FSM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	-25	-36	-25	0	multi-exon	FALSE	canonical	3	6459	junction_1	109.515092820832	1026	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2784	False	NA	NA	False	NA	NA	NA	4795963	4797561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416
tx.10748	chr7	-	1027	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	220	-9	-19	9	multi-exon	FALSE	canonical	3	9878	junction_1	292.246851518066	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGTGTCTAGAACCTC	NA	False	NA	NA	False	NA	NA	NA	4815369	4811003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
tx.10749	chr7	+	186	2	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAGCAAAAGAAACAAACT	2957	False	NA	NA	False	NA	NA	NA	4815940	4818240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_+_4816051_4818164
tx.1075	chr10	+	1892	11	ISM	ENSMUSG00000003345.17	ENSMUST00000085435.7	1825	12	4825	-409	86	-3	3prime_fragment	FALSE	canonical	3	537	junction_3	60.3762370473682	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGCCTGGGCTTTA	NA	False	NA	NA	False	NA	NA	NA	80470314	80476580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
tx.10750	chr7	-	1079	6	FSM	ENSMUSG00000052605.13	ENSMUST00000064547.13	1080	6	1	0	1	0	multi-exon	FALSE	canonical	1	1	junction_5	2.13541565040626	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGAACCATTATTGGGT	NA	False	NA	NA	False	NA	NA	NA	4869191	4847957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_4848365_4852448_4852567_4853753_4853825_4854022_4854233_4854391_4854533_4869059
tx.10751	chr7	-	2577	3	FSM	ENSMUSG00000061374.15	ENSMUST00000208944.2	2306	3	-55	-216	-55	0	multi-exon	FALSE	canonical	3	199	junction_2	122.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	4217	False	NA	NA	False	NA	NA	NA	5016292	5010057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_5012205_5015676_5016022_5016207
tx.10752	chr7	-	2546	3	FSM	ENSMUSG00000061374.15	ENSMUST00000077385.15	2546	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	130	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	2832	False	NA	NA	False	NA	NA	NA	5017677	5010057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_5012205_5015676_5016022_5017623
tx.10753	chr7	+	1167	2	FSM	ENSMUSG00000051184.8	ENSMUST00000086349.5	1142	2	-23	-2	-23	1	multi-exon	FALSE	canonical	3	22	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTGTGTGTTCAGTCAT	2917	False	NA	NA	False	NA	NA	NA	5018445	5021488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_5018560_5020435
tx.10754	chr7	+	1482	2	ISM	ENSMUSG00000074405.9	ENSMUST00000085427.6	2751	3	9692	-88	938	88	3prime_fragment	FALSE	canonical	3	4	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCTAATCTTGAACTTT	NA	False	NA	NA	False	NA	NA	NA	5033260	5036225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_5034279_5035761
tx.10755	chr7	+	1054	2	FSM	ENSMUSG00000055633.7	ENSMUST00000069324.7	1096	2	42	0	42	0	multi-exon	FALSE	canonical	3	32	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGTTCTTACTTGCA	2961	False	NA	NA	False	NA	NA	NA	5054578	5056722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_5054714_5055803
tx.10756	chr7	+	1327	6	NNC	ENSMUSG00000035228.16	novel	1534	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.06630035524124	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCCCCAGGTCTTACTA	38	False	NA	NA	False	NA	NA	NA	5059701	5063784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_5059797_5060497_5060659_5060797_5060903_5060990_5061168_5062494_5062705_5063205
tx.10757	chr7	+	2126	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	52	5	-50	0	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	366	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	124	False	NA	NA	False	NA	NA	NA	5065193	5082932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
tx.10758	chr7	+	2440	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	31.3495356971958	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1436	False	NA	NA	False	NA	NA	NA	5083361	5101177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
tx.10759	chr7	-	559	3	FSM	ENSMUSG00000046792.9	ENSMUST00000207628.2	576	3	23	-6	-3	6	multi-exon	FALSE	canonical	3	90	junction_1	37	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAAGTTCATGCCGACTT	9623	False	NA	NA	False	NA	NA	NA	6158973	6145278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_6145619_6146060_6146150_6158843
tx.1076	chr10	+	1396	7	ISM	ENSMUSG00000003345.17	ENSMUST00000085435.7	1825	12	8811	-407	197	3	3prime_fragment	FALSE	canonical	3	651	junction_4	48.6121269735124	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGGCCTGGGCTT	NA	False	NA	NA	False	NA	NA	NA	80474300	80476578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
tx.10760	chr7	-	646	4	NNC	ENSMUSG00000046792.9	novel	576	3	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	65.7723346096214	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCGAAGTTCATGCCGA	9624	False	NA	NA	False	NA	NA	NA	6158972	6145281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_6145619_6145705_6145797_6146060_6146150_6158843
tx.10761	chr7	-	1003	2	FSM	ENSMUSG00000046792.9	ENSMUST00000207957.2	880	2	-44	-79	1	12	multi-exon	FALSE	canonical	3	164	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGCCGACTTGAGGTT	9627	False	NA	NA	False	NA	NA	NA	6158969	6145272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_6146150_6158843
tx.10762	chr7	-	678	4	NNC	ENSMUSG00000046792.9	novel	576	3	NA	NA	-199	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	64.546279693118	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCGAAGTTCATGCCGA	9401	False	NA	NA	False	NA	NA	NA	6159195	6145281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_6145619_6146060_6146150_6158843_6158930_6159029
tx.10763	chr7	+	769	3	FSM	ENSMUSG00000044876.16	ENSMUST00000149540.3	701	3	-54	-14	-3	14	multi-exon	FALSE	canonical	3	144	junction_2	5.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTTGCCTGGGTTTC	2964	False	NA	NA	False	NA	NA	NA	6175508	6187444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_6175574_6176980_6177101_6186860
tx.10764	chr7	+	1529	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	11	927	0	1	multi-exon	FALSE	canonical	3	89	junction_1	90.9004339312464	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGACTCTCCGGTGTTGT	2967	False	NA	NA	False	NA	NA	NA	6175511	6193421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
tx.10765	chr7	+	2015	6	FSM	ENSMUSG00000058028.15	ENSMUST00000072662.12	1980	6	-41	6	-41	-6	multi-exon	FALSE	canonical	2	4	junction_1	2.49799919935936	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCTATTCATTGATTGA	3039	False	NA	NA	False	NA	NA	NA	6225235	6242416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_6225336_6227584_6227759_6233070_6233538_6234335_6234537_6236813_6236968_6241497
tx.10766	chr7	+	951	9	NIC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-232	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	26.4952825989835	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	2980	False	NA	NA	False	NA	NA	NA	6263302	6284860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_6263544_6266905_6266933_6269287_6269345_6269828_6269847_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
tx.10767	chr7	+	927	6	NNC	ENSMUSG00000053367.16	novel	684	11	NA	NA	-271	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.4854063446758	11	6	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	2941	False	NA	NA	False	NA	NA	NA	6263263	6284860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_6263544_6266905_6266967_6277340_6277373_6280418_6280541_6282412_6282451_6284466
tx.10768	chr7	+	1209	7	FSM	ENSMUSG00000070837.7	ENSMUST00000208049.2	1401	7	192	0	-11	0	multi-exon	FALSE	canonical	2	56	junction_6	128.262751152988	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2903	False	NA	NA	False	NA	NA	NA	6998490	7006090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
tx.10769	chr7	+	1331	7	FSM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	-11	0	-11	0	multi-exon	FALSE	canonical	2	56	junction_6	160.229696234985	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2903	False	NA	NA	False	NA	NA	NA	6998490	7006090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
tx.1077	chr10	-	2688	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGGCTGCTCCTTGTTG	9111	False	NA	NA	False	NA	NA	NA	80537695	80521086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
tx.10770	chr7	-	2038	5	FSM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	4	0	4	0	multi-exon	FALSE	canonical	3	51	junction_3	2.54950975679639	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAATGACTCTTGAGGT	6240	False	NA	NA	False	NA	NA	NA	7124483	7117688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221
tx.10771	chr7	-	3056	4	FSM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	-26	-2	-26	2	multi-exon	TRUE	canonical	3	13	junction_1	4.32049379893857	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTTGCGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	7139780	7133671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_7136168_7137165_7137250_7138290_7138418_7139431
tx.10772	chr7	-	2774	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	4	-1	4	1	multi-exon	FALSE	canonical	3	42	junction_2	7.29725975966321	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGACTATTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	7212993	7205114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
tx.10773	chr7	-	2463	5	FSM	ENSMUSG00000092574.5	ENSMUST00000210322.2	1179	5	11	-1295	11	1295	multi-exon	FALSE	canonical	3	23	junction_4	6.74536878161602	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTGGGGACCAGCTC	NA	False	NA	NA	False	NA	NA	NA	8096029	8088029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_8089971_8091140_8091228_8091987_8092114_8093259_8093299_8095759
tx.10774	chr7	-	1629	6	NNC	ENSMUSG00000092574.5	novel	1179	5	NA	NA	20	280	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	15.2367975637927	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCTTTTCAAAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	8096020	8089044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_8089971_8091140_8091228_8091987_8092114_8093259_8093299_8095258_8095449_8095759
tx.10775	chr7	-	2539	5	FSM	ENSMUSG00000092490.8	ENSMUST00000174729.2	825	5	-190	-1524	9	1094	multi-exon	FALSE	canonical	3	19	junction_4	6.67083203206317	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTCACTTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	8865841	8857751	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865573
tx.10776	chr7	-	4204	4	FSM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	0	-5	0	5	multi-exon	TRUE	canonical	3	55	junction_1	5.43650214343336	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTAAGACTTCATTT	NA	False	NA	NA	False	NA	NA	NA	10229321	10221150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_10224936_10226205_10226333_10228416_10228456_10229068
tx.10777	chr7	+	1832	4	NNC	ENSMUSG00000110190.2	novel	2277	4	NA	NA	-23	-420	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	3.29983164553722	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTTGTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	11248213	11252618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_11248296_11248948_11249421_11251256_11251417_11251500
tx.10778	chr7	-	366	2	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCCTGCTTCATAACTG	NA	False	NA	NA	False	NA	NA	NA	11285367	11276301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_11276464_11285163
tx.10779	chr7	+	4048	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	20	680	8	2	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGGAAACCTGGTTACC	NA	False	NA	NA	False	NA	NA	NA	12212239	12229482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
tx.1078	chr10	-	960	5	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	45	0	intron_retention	FALSE	canonical	3	953	junction_4	141.850934082226	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	80634083	80631932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_80632357_80632424_80632657_80633606_80633674_80633743_80633812_80633914
tx.10780	chr7	+	845	5	NNC	ENSMUSG00000030386.20	novel	4748	7	NA	NA	17	363	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	49.6959505392542	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCATCTCAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	12212248	12218191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12217963
tx.10781	chr7	+	2273	4	FSM	ENSMUSG00000030386.20	ENSMUST00000123589.8	3509	4	43	1193	-15	-1193	multi-exon	FALSE	canonical	3	113	junction_3	4.98887651569859	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATGGGTATTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	12212274	12216635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861
tx.10782	chr7	-	3698	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	-2	3031	-2	-1916	multi-exon	FALSE	canonical	3	14	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGTAGTGTCCCTGCT	NA	False	NA	NA	False	NA	NA	NA	12552787	12541939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_12545594_12552743
tx.10783	chr7	+	3365	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	229	-3	-47	3	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACTATAGCGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	12568916	12584507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
tx.10784	chr7	+	2248	2	ISM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	12552	-655	11744	3	3prime_fragment	FALSE	canonical	3	304	junction_1	0	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACTATAGCGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	12581961	12584507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_12582026_12582323
tx.10785	chr7	+	733	6	FSM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	28	0	0	0	multi-exon	FALSE	canonical	3	14799	junction_5	1601.25238485381	12654	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	NA	False	NA	NA	NA	12656244	12660613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
tx.10786	chr7	+	2587	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	655	3	655	0	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCATGCCTCAGCTGT	NA	False	NA	NA	False	NA	NA	NA	12758733	12764959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
tx.10787	chr7	+	2510	16	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	984	-7	-622	7	3prime_fragment	FALSE	canonical	3	3307	junction_6	392.926320489393	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCTGTCTGGGGACTG	NA	False	NA	NA	False	NA	NA	NA	12759062	12764969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
tx.10788	chr7	+	1815	12	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	3891	-1	-82	1	3prime_fragment	FALSE	canonical	3	3307	junction_2	405.329067416293	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCAGCTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	12761969	12764963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
tx.10789	chr7	+	1009	5	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	5528	3	-24	0	3prime_fragment	FALSE	canonical	3	3866	junction_2	266.303750442986	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCATGCCTCAGCTGT	NA	False	NA	NA	False	NA	NA	NA	12763606	12764959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
tx.1079	chr10	-	904	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	356	0	24	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	288	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	80634104	80631932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
tx.10790	chr7	-	904	6	FSM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	45	0	-23	0	multi-exon	FALSE	canonical	3	2610	junction_5	213.695671458268	1071	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	6980	False	NA	NA	False	NA	NA	NA	12768689	12765940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
tx.10791	chr7	-	960	6	FSM	ENSMUSG00000005575.17	ENSMUST00000125964.8	801	6	-68	-91	-48	0	multi-exon	FALSE	canonical	3	39	junction_5	904.553503116317	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGCCTCTTCCTTC	9021	False	NA	NA	False	NA	NA	NA	12771622	12769164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771481
tx.10792	chr7	-	949	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	523	0	-4	0	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGCCTCTTCCTTC	8966	False	NA	NA	False	NA	NA	NA	12771677	12769164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
tx.10793	chr7	+	3086	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	6	-1	-3	1	multi-exon	TRUE	canonical	0	0	junction_1	267.791767474326	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2626	False	NA	NA	False	NA	NA	NA	13012757	13045351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
tx.10794	chr7	+	638	6	ISM	ENSMUSG00000056394.21	ENSMUST00000146998.9	944	9	-1	2769	-1	-2769	5prime_fragment	FALSE	canonical	0	0	junction_1	535.999104476864	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAGAAGGTGAGGGAG	2628	False	NA	NA	False	NA	NA	NA	13012759	13022674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589
tx.10795	chr7	+	1792	16	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	16991	-1	-6556	1	3prime_fragment	FALSE	canonical	3	1124	junction_1	106.922318634709	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	47	False	NA	NA	False	NA	NA	NA	13030181	13045351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
tx.10796	chr7	-	1354	3	FSM	ENSMUSG00000041583.9	ENSMUST00000108513.5	1344	3	-13	3	-13	-3	multi-exon	FALSE	canonical	3	46	junction_1	9.5	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCAGTTTTTACC	NA	False	NA	NA	False	NA	NA	NA	15573616	15567168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_15567876_15568304_15568891_15573555
tx.10797	chr7	+	2133	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	-43	0	4	0	multi-exon	FALSE	canonical	3	257	junction_2	3	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATCTGTGCCTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	15630052	15634223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_15630183_15631328_15631478_15632369
tx.10798	chr7	+	930	5	FSM	ENSMUSG00000074365.14	ENSMUST00000098801.9	934	5	4	0	4	0	multi-exon	FALSE	canonical	3	145	junction_3	373.339992500134	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGCTTTAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	15630052	15637945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_15630183_15631328_15631478_15632369_15632542_15636774_15636933_15637624
tx.10799	chr7	+	614	3	FSM	ENSMUSG00000074365.14	ENSMUST00000171280.3	571	3	-43	0	-43	0	multi-exon	FALSE	canonical	3	864	junction_1	106.5	439	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGCTTTAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	15635527	15637945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_15635663_15636774_15636933_15637624
tx.108	chr1	-	1173	6	ISM	ENSMUSG00000057363.13	ENSMUST00000076997.13	1921	15	62798	-1	62073	1	3prime_fragment	FALSE	canonical	3	189	junction_2	16.1195533436879	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTGACATCTGCTTT	7800	False	NA	NA	False	NA	NA	NA	43804103	43788670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049
tx.1080	chr10	-	1040	4	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_3	509.183878596153	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	80634375	80631932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_80632357_80632424_80632489_80632565_80632657_80633914
tx.10800	chr7	-	681	6	FSM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	50	5	50	-5	multi-exon	FALSE	canonical	3	1985	junction_1	35.4028247460566	567	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGGAGATGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	15656277	15651137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15654373_15654399_15656176
tx.10801	chr7	-	1517	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	7	1652	7	3	multi-exon	FALSE	canonical	3	1334	junction_1	195.89089579548	2034	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGGTCTTGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	15679992	15671759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
tx.10802	chr7	+	1526	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	144	847	-6	389	multi-exon	TRUE	canonical	3	1130	junction_8	65.9754499795189	311	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	15832526	15851053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
tx.10803	chr7	+	1640	12	FSM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	-10	0	-10	0	multi-exon	FALSE	canonical	3	76	junction_5	5.62609034427847	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTCTGGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	15853809	15861441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
tx.10806	chr7	+	1276	2	FSM	ENSMUSG00000002083.14	ENSMUST00000147267.2	881	2	113	-508	113	0	multi-exon	FALSE	canonical	3	237	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	945	False	NA	NA	False	NA	NA	NA	16047554	16052130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_16047743_16051042
tx.10807	chr7	-	1915	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	-40	0	-19	0	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	937	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	16121750	16060974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
tx.10808	chr7	+	583	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	238	-6	54	2	multi-exon	FALSE	canonical	3	728	junction_1	16.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGAGTGATAGCTCCT	NA	False	NA	NA	False	NA	NA	NA	16186941	16189421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_16187096_16188045_16188139_16189085
tx.10809	chr7	+	802	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	34	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	14.0423466699836	304	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	False	NA	NA	False	NA	NA	NA	16472368	16483219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
tx.1081	chr10	+	1745	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	468	0	-66	0	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4820	False	NA	NA	False	NA	NA	NA	80634499	80640758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
tx.10810	chr7	+	2704	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	29	31	1	-31	multi-exon	FALSE	canonical	3	1461	junction_5	112.684293492927	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	NA	False	NA	NA	NA	16515293	16532168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
tx.10811	chr7	+	2756	10	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	32	-31	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	649.005468979601	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	NA	False	NA	NA	NA	16515324	16532168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
tx.10812	chr7	+	1733	9	NNC	ENSMUSG00000001918.18	novel	853	3	NA	NA	154	-31	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_1	534.082800228579	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	NA	False	NA	NA	NA	16518816	16532168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_16518953_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
tx.10813	chr7	-	727	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	135	1428	135	337	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	282	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGACTGCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	16657904	16650731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
tx.10814	chr7	-	2254	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-21	-12	intron_retention	FALSE	canonical	3	1050	junction_5	58.5383959607102	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCTCAAACCCACCTC	NA	False	NA	NA	False	NA	NA	NA	16761755	16738576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
tx.10815	chr7	-	1939	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-21	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	317.791718565618	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCTCAAACCCACCTC	NA	False	NA	NA	False	NA	NA	NA	16761755	16738576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756374_16756582_16761617
tx.10816	chr7	-	1986	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	74	12	-33	-12	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	345	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCTCAAACCCACCTC	NA	False	NA	NA	False	NA	NA	NA	16761767	16738576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
tx.10817	chr7	+	726	3	FSM	ENSMUSG00000030413.8	ENSMUST00000032573.8	694	3	-32	0	-32	0	multi-exon	FALSE	canonical	3	241	junction_2	21	127	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCCCTCCGGTGAATC	NA	False	NA	NA	False	NA	NA	NA	18618572	18624366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_18618899_18623202_18623325_18624088
tx.10818	chr7	-	2005	14	FSM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	17	0	0	0	multi-exon	TRUE	canonical	3	126	junction_7	27.4902887640592	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2777	False	NA	NA	False	NA	NA	NA	18644323	18624807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
tx.10819	chr7	-	1999	14	NIC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_7	38.5657050949086	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2771	False	NA	NA	False	NA	NA	NA	18644329	18624807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
tx.1082	chr10	+	1018	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	460	junction_4	2987.93005272881	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	80662519	80665119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664726
tx.10820	chr7	+	2505	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	10	2358	10	2	multi-exon	FALSE	canonical	3	58	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAACTACCAGAGTCTC	9347	False	NA	NA	False	NA	NA	NA	18853793	18871739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_18853862_18869302
tx.10821	chr7	-	2073	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	28	609	28	-609	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGGCTGGCCTGGAAC	7232	False	NA	NA	False	NA	NA	NA	18883188	18874235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
tx.10822	chr7	+	511	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	97	812	-40	-812	multi-exon	FALSE	canonical	3	3249	junction_1	86	2256	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCCAGTGGTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	18883743	18886655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_18883820_18885142_18885323_18886400
tx.10823	chr7	+	382	2	ISM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	1549	812	1412	-812	3prime_fragment	FALSE	canonical	3	3421	junction_1	0	360	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCCAGTGGTCTTCTC	501	False	NA	NA	False	NA	NA	NA	18885195	18886655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_18885323_18886400
tx.10824	chr7	+	2251	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	2	2	2	1	multi-exon	FALSE	canonical	3	61	junction_1	24.7224719088515	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	18915096	18940405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
tx.10825	chr7	+	2254	19	NIC	ENSMUSG00000040811.16	novel	596	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	28.4707452191426	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	NA	False	NA	NA	NA	18915227	18940407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_18915281_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
tx.10826	chr7	+	3359	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	6	1	6	-1	multi-exon	FALSE	canonical	3	147	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTCAATTTTA	3239	False	NA	NA	False	NA	NA	NA	18962264	18981792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_18962510_18978678
tx.10827	chr7	+	1397	2	FSM	ENSMUSG00000052214.10	ENSMUST00000161711.2	1390	2	0	-7	0	7	multi-exon	FALSE	canonical	2	18	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAAACCATTATTTGTT	3282	False	NA	NA	False	NA	NA	NA	18962307	18990475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_18962510_18989280
tx.10828	chr7	-	2215	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	0	0	0	0	multi-exon	TRUE	canonical	3	1236	junction_9	117.461666323765	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	NA	NA	NA	19005742	18990853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
tx.1083	chr10	+	1043	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	6566	junction_4	420.790624895565	1001	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTGTGTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	80662519	80665122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
tx.10830	chr7	+	1062	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	313	0	-10	0	multi-exon	TRUE	canonical	3	315	junction_9	39.5851948880006	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1024	False	NA	NA	False	NA	NA	NA	19079015	19090449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
tx.10831	chr7	-	1389	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	13	837	13	-837	multi-exon	FALSE	canonical	3	228	junction_1	10	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAAAAGAG	2171	False	NA	NA	False	NA	NA	NA	19093393	19090775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19091942_19093014_19093157_19093312
tx.10832	chr7	-	1847	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108459.9	1849	13	23	-21	-20	18	multi-exon	TRUE	canonical	3	11	junction_12	5.52959210872636	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGTAGTGTCTCCTCT	6355	False	NA	NA	False	NA	NA	NA	19133823	19128343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133733
tx.10833	chr7	-	1720	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108458.10	1823	13	18	85	18	-21	multi-exon	FALSE	canonical	2	9	junction_12	5.99247212944893	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGTTTGCCGAGGGCC	2167	False	NA	NA	False	NA	NA	NA	19138011	19128446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
tx.10834	chr7	-	255	2	FSM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	10	2923	10	-2923	multi-exon	FALSE	canonical	3	24	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCCACGGTTGTGCCG	NA	False	NA	NA	False	NA	NA	NA	19242282	19241333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19241536_19242229
tx.10835	chr7	+	699	5	FSM	ENSMUSG00000002043.18	ENSMUST00000147114.2	719	5	18	2	2	2	multi-exon	FALSE	canonical	3	104	junction_1	197.958802532244	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTGCAGTGCTTATCA	523	False	NA	NA	False	NA	NA	NA	19242652	19250068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_19242758_19248346_19248465_19248931_19249016_19249128_19249223_19249770
tx.10836	chr7	+	769	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	16	0	2	0	multi-exon	FALSE	canonical	3	436	junction_1	62.2009646227452	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	523	False	NA	NA	False	NA	NA	NA	19242652	19250070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
tx.10837	chr7	-	818	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	-52	-3	-10	0	multi-exon	FALSE	canonical	3	225	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	2892	False	NA	NA	False	NA	NA	NA	19307320	19298870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19299602_19307233
tx.10838	chr7	-	798	2	NIC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	2453	False	NA	NA	False	NA	NA	NA	19307759	19298870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_19299602_19307692
tx.10839	chr7	+	1495	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	35	0	35	0	multi-exon	FALSE	canonical	3	235	junction_1	5.5	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGACTTTCTTGGGGT	762	False	NA	NA	False	NA	NA	NA	19311246	19314581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_19311554_19311741_19311886_19313537
tx.1084	chr10	-	470	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	0	-2	0	-2	multi-exon	FALSE	canonical	3	2872	junction_3	751.769616009822	403	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCTGTAACTTTGA	NA	False	NA	NA	False	NA	NA	NA	80691043	80688656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
tx.10840	chr7	-	463	8	ISM	ENSMUSG00000061028.8	ENSMUST00000207253.2	2018	11	3551	-5	23	0	3prime_fragment	TRUE	canonical	3	161	junction_6	42.7718198283469	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	8208	False	NA	NA	False	NA	NA	NA	19319041	19314962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014
tx.10841	chr7	-	1790	9	ISM	ENSMUSG00000002983.18	ENSMUST00000094762.10	2209	12	9710	0	8706	0	3prime_fragment	FALSE	canonical	3	199	junction_4	23.832750575626	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	5829	False	NA	NA	False	NA	NA	NA	19353653	19340141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438
tx.10842	chr7	-	2328	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_10	54.7927002437368	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	19362376	19340141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362000
tx.10843	chr7	-	2343	11	NNC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	71.0836830784675	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	19362376	19340141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361911_19362000
tx.10844	chr7	-	2464	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	9	1670	-3	8	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCACCTCCTCTGCCT	5157	False	NA	NA	False	NA	NA	NA	19398949	19367165	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
tx.10845	chr7	-	1588	5	ISM	ENSMUSG00000002981.11	ENSMUST00000208846.2	3107	13	-9	8826	0	4695	5prime_fragment	FALSE	canonical	3	1529	junction_4	97.3575883020938	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAGAGAGAAATAAA	5151	False	NA	NA	False	NA	NA	NA	19398955	19375999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
tx.10846	chr7	-	421	4	FSM	ENSMUSG00000040564.15	ENSMUST00000045035.12	432	4	11	0	11	0	multi-exon	FALSE	canonical	3	965	junction_3	145.90027035235	155	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGAAGTGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	19426574	19423405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19423562_19425812_19425961_19426335_19426412_19426533
tx.10847	chr7	-	1113	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	134	161	-2	2	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	1433	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	19432979	19430194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
tx.10848	chr7	-	1407	4	ISM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	28088	21	28048	-21	3prime_fragment	FALSE	canonical	3	314	junction_3	7.40870359029762	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTCTTGTGTTTTCTGT	3834	False	NA	NA	False	NA	NA	NA	19455410	19450589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277
tx.10849	chr7	-	1969	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	559	junction_1	167.41517255016	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGGGTGTTTTGTAATC	NA	False	NA	NA	False	NA	NA	NA	19483472	19458085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
tx.1085	chr10	-	596	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	170	459	-14	-5	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	1389	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCGTGTCACCTCACTG	5618	False	NA	NA	False	NA	NA	NA	80736633	80735742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80736094_80736315_80736385_80736457
tx.10850	chr7	-	1792	11	ISM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	4908	7	4856	-7	3prime_fragment	FALSE	canonical	3	522	junction_7	50.7952753708453	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCCTACCGCCAGGTT	8820	False	NA	NA	False	NA	NA	NA	19499564	19490062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537
tx.10851	chr7	-	2377	15	FSM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	45	7	-7	-7	multi-exon	TRUE	canonical	3	510	junction_11	49.5145824737624	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCCTACCGCCAGGTT	3957	False	NA	NA	False	NA	NA	NA	19504427	19490062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
tx.10852	chr7	-	1673	12	FSM	ENSMUSG00000040525.14	ENSMUST00000043822.8	1662	12	-11	0	-11	0	multi-exon	FALSE	canonical	2	11	junction_1	3.71283233757493	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCCGTGTGTGACAGAG	NA	False	NA	NA	False	NA	NA	NA	19530745	19513642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19513722_19514697_19514773_19514894_19515002_19518727_19518806_19519162_19519325_19520107_19520240_19522893_19522982_19524324_19524463_19526032_19526155_19526433_19526591_19526733_19526881_19530357
tx.10853	chr7	+	369	2	FSM	ENSMUSG00000087593.2	ENSMUST00000137373.2	402	2	26	7	26	-7	multi-exon	FALSE	canonical	1	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGAGCATGAAGGAATGA	NA	False	NA	NA	False	NA	NA	NA	19550503	19552543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_19550699_19552369
tx.10854	chr7	-	2867	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	38	0	-9	0	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCCGAGCCTTTG	9969	False	NA	NA	False	NA	NA	NA	19655047	19637502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
tx.10855	chr7	+	454	2	NNC	ENSMUSG00000090075.2	novel	338	2	NA	NA	-63	156	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGCCTTAATTTTTC	NA	False	NA	NA	False	NA	NA	NA	19654590	19661688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_19654715_19661358
tx.10856	chr7	+	882	3	ISM	ENSMUSG00000047603.10	ENSMUST00000205680.2	1332	5	-22	3389	0	641	5prime_fragment	TRUE	canonical	3	44	junction_2	1	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGTGCATTTTAGT	NA	False	NA	NA	False	NA	NA	NA	23833598	23836980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_23833913_23834682_23834741_23836470
tx.10857	chr7	-	4451	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	-8	1959	-8	971	multi-exon	TRUE	canonical	3	37	junction_1	10.4986771653491	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTGCTCTCTCTGGT	NA	False	NA	NA	False	NA	NA	NA	23907582	23895330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
tx.10858	chr7	-	2335	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	137	8	99	-8	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGTATCATGTGGATTC	NA	False	NA	NA	False	NA	NA	NA	23998963	23990471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
tx.10859	chr7	+	2230	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	11	1	11	-1	multi-exon	TRUE	canonical	3	128	junction_3	14.7828462881374	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGGTTTGTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	24099054	24122202	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
tx.1086	chr10	-	3437	11	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	3	1	intron_retention	FALSE	canonical	3	226	junction_7	23.5501592351305	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3114	False	NA	NA	False	NA	NA	NA	80754076	80737196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
tx.10860	chr7	+	1181	4	NNC	ENSMUSG00000064264.15	novel	1159	3	NA	NA	172	-15	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	89.1777251709566	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGCTCCGCATATGT	NA	False	NA	NA	False	NA	NA	NA	24206726	24215090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214461
tx.10861	chr7	+	943	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	203	13	203	-13	multi-exon	FALSE	canonical	3	276	junction_2	107	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	NA	False	NA	NA	NA	24206757	24215092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_24206862_24209970_24210179_24214461
tx.10862	chr7	+	904	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	263	15	203	-13	multi-exon	FALSE	canonical	3	407	junction_2	41.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	NA	False	NA	NA	NA	24206757	24215092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_24206862_24209970_24210179_24214500
tx.10863	chr7	+	2109	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	44	2	-4	1	multi-exon	FALSE	canonical	3	337	junction_4	31.1527862919194	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	NA	False	NA	NA	False	NA	NA	NA	24246618	24272861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
tx.10864	chr7	+	1032	9	ISM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	20303	2	91	1	3prime_fragment	FALSE	canonical	3	355	junction_3	24.0048823158957	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	NA	False	NA	NA	False	NA	NA	NA	24266877	24272861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
tx.10865	chr7	+	975	7	ISM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	6328	0	6328	0	3prime_fragment	FALSE	canonical	3	79	junction_1	14.7384606462894	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTCTGCTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	24293295	24308350	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
tx.10866	chr7	+	1078	4	FSM	ENSMUSG00000054169.8	ENSMUST00000038069.9	1048	4	-30	0	-30	0	multi-exon	FALSE	canonical	3	18	junction_2	7.31816613336672	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCTCCTTCGACTCTA	1077	False	NA	NA	False	NA	NA	NA	24476600	24484081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_24476765_24477550_24477911_24480294_24480655_24483887
tx.10867	chr7	+	740	3	Genic_Genomic	ENSMUSG00000091955.3	novel	485	1	NA	NA	-8308	-6	multi-exon	FALSE	canonical	2	5	junction_2	2.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGGCATGATTAAAC	5830	False	NA	NA	False	NA	NA	NA	24553329	24562116	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr7_+_24553498_24553668_24553741_24561616
tx.10868	chr7	+	1067	5	ISM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	4117	0	4117	0	3prime_fragment	FALSE	canonical	3	13	junction_4	5.31507290636732	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGAGAGTTGATTATC	NA	False	NA	NA	False	NA	NA	NA	24573598	24577076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
tx.10869	chr7	+	512	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	262	0	0	0	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	6458	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	NA	False	NA	NA	NA	24584057	24589231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
tx.1087	chr10	-	1608	2	ISM	ENSMUSG00000062075.14	ENSMUST00000105332.3	1643	9	3126	-1430	3126	-4	3prime_fragment	FALSE	canonical	3	292	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCTCAGAGTAGATC	3131	False	NA	NA	False	NA	NA	NA	80739120	80737201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_80738735_80739045
tx.10870	chr7	+	733	3	ISM	ENSMUSG00000003379.8	ENSMUST00000003469.8	1457	5	2089	339	2089	-339	3prime_fragment	FALSE	canonical	1	1	junction_1	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGGCAGGAGTCATGG	4987	False	NA	NA	False	NA	NA	NA	24598894	24601283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_24599131_24600657_24600727_24600855
tx.10871	chr7	+	3276	29	FSM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	-62	0	-11	0	multi-exon	FALSE	canonical	3	251	junction_1	33.6220742600902	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9862	False	NA	NA	False	NA	NA	NA	24603769	24626017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
tx.10872	chr7	-	822	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	79	-2	-37	2	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	429	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCCTGGTATTTTCTC	4574	False	NA	NA	False	NA	NA	NA	24672100	24669174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
tx.10873	chr7	+	3084	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	45	1011	-34	1	multi-exon	FALSE	canonical	3	224	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	5000	False	NA	NA	False	NA	NA	NA	24776674	24781906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_24776812_24778959
tx.10874	chr7	-	1650	10	ISM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	2244	3	2244	-3	3prime_fragment	FALSE	canonical	3	363	junction_8	12.2090838474908	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTGTCTGGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	24935032	24927685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977
tx.10875	chr7	-	2671	4	FSM	ENSMUSG00000040857.16	ENSMUST00000045847.15	3505	4	67	767	36	-767	multi-exon	FALSE	canonical	3	7	junction_2	2.82842712474619	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4548	False	NA	NA	False	NA	NA	NA	24950119	24942752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24950003
tx.10876	chr7	-	398	2	ISM	ENSMUSG00000005447.13	ENSMUST00000140093.2	833	3	512	0	512	0	3prime_fragment	FALSE	canonical	3	415	junction_1	0	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	7215	False	NA	NA	False	NA	NA	NA	24995615	24994473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_24994802_24995545
tx.10877	chr7	-	1094	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	75	-310	75	0	multi-exon	TRUE	canonical	3	385	junction_2	17.4570902500961	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	-5	True	NA	NA	False	NA	NA	NA	24997232	24994473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
tx.10878	chr7	-	853	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	48	0	-1	0	multi-exon	FALSE	canonical	3	245	junction_5	66.0714764478591	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8547	False	NA	NA	False	NA	NA	NA	24997363	24994473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
tx.10879	chr7	+	1462	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	3	0	3	0	multi-exon	FALSE	canonical	3	84	junction_1	20.2938414303453	154	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1742	False	NA	NA	False	NA	NA	NA	25318841	25324976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
tx.1088	chr10	-	3363	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	3	4	3	-4	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCTCAGAGTAGATC	3114	False	NA	NA	False	NA	NA	NA	80754076	80737201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
tx.10880	chr7	-	1680	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	219	0	219	0	multi-exon	FALSE	canonical	3	232	junction_4	24.6373699895098	147	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	9901	False	NA	NA	False	NA	NA	NA	25358187	25329370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
tx.10881	chr7	+	1005	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	15	0	-12	0	multi-exon	FALSE	canonical	3	1190	junction_2	58.9528625259198	1015	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	NA	False	NA	NA	NA	25358603	25367457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
tx.10882	chr7	+	999	4	FSM	ENSMUSG00000063439.8	ENSMUST00000205658.2	995	4	0	-4	0	4	multi-exon	FALSE	canonical	3	77	junction_2	1.69967317119759	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTCCTTGTATCCGCT	NA	False	NA	NA	False	NA	NA	NA	25380204	25385987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_25380404_25380807_25380900_25382715_25382842_25385405
tx.10883	chr7	-	2983	5	FSM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	43	6	0	-6	multi-exon	FALSE	canonical	3	101	junction_3	5.52268050859363	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATCCATTCATCTGTT	NA	False	NA	NA	False	NA	NA	NA	25418470	25410536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25418342
tx.10884	chr7	+	595	2	NIC	ENSMUSG00000108415.2	novel	605	3	NA	NA	-12	54	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTACTTATTCATGCAAT	NA	False	NA	NA	False	NA	NA	NA	25559552	25569362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_25559652_25568866
tx.10885	chr7	-	2054	10	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24729	-325	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	17.7332776384533	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTGGTGTCTTGTGCC	NA	False	NA	-45	True	NA	NA	NA	26410591	26364976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26410317
tx.10886	chr7	-	2066	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	41	0	41	0	multi-exon	FALSE	canonical	3	451	junction_5	57.8840219749803	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	26866186	26858082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
tx.10887	chr7	-	1704	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	232.127206505399	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	26866187	26858082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864407_26865154_26866108
tx.10888	chr7	-	1109	7	NIC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	262.193312907353	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	NA	False	NA	NA	NA	26878320	26867849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26878151
tx.10889	chr7	-	1185	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	6	1	-2	-1	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	349	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	NA	False	NA	NA	NA	26878315	26867849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
tx.1089	chr10	+	1284	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	248	False	NA	NA	False	NA	NA	NA	80765906	80768038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
tx.10890	chr7	-	1450	7	FSM	ENSMUSG00000053291.16	ENSMUST00000134462.8	1372	7	-76	-2	-3	-1	multi-exon	FALSE	canonical	3	670	junction_1	25.5451669705946	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	NA	False	NA	NA	NA	26878316	26867849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875664_26878151
tx.10891	chr7	-	575	4	FSM	ENSMUSG00000089661.10	ENSMUST00000121848.2	572	4	0	-3	0	1	multi-exon	FALSE	canonical	3	138	junction_1	9.2736184954957	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTTTGGTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	26880582	26879165	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_26879260_26879593_26879705_26880124_26880259_26880346
tx.10892	chr7	-	1260	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	106	-1	-12	1	multi-exon	FALSE	canonical	3	1453	junction_6	315.533102683203	1309	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	NA	False	NA	NA	NA	26895590	26886430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
tx.10893	chr7	-	1257	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	80	-1	-12	1	multi-exon	FALSE	canonical	3	597	junction_6	627.600567417065	605	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	NA	False	NA	NA	NA	26895590	26886430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
tx.10894	chr7	-	1309	2	ISM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	50	7443	-42	14	5prime_fragment	FALSE	canonical	3	597	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATCCACACATAAAATT	NA	False	NA	NA	False	NA	NA	NA	26895620	26893874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_26894982_26895418
tx.10895	chr7	+	922	6	ISM	ENSMUSG00000078786.10	ENSMUST00000179391.8	1748	7	1441	183	99	-24	3prime_fragment	FALSE	canonical	2	9	junction_4	4.47213595499958	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTTCAGCTTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	26896646	26903562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
tx.10896	chr7	+	2174	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	3	4	3	1	multi-exon	TRUE	canonical	3	74	junction_1	14.7544528041883	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTCTTTTCTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	26932450	26957371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
tx.10897	chr7	-	1603	8	ISM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	22985	1	0	-1	3prime_fragment	FALSE	canonical	3	513	junction_4	58.3896132781808	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	27010103	27004565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945
tx.10898	chr7	-	2319	18	FSM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	41	-2	-24	2	multi-exon	FALSE	canonical	3	272	junction_5	29.8825845289775	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATAGTCTTGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	27055403	27041555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
tx.10899	chr7	+	844	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	27	157	-27	3	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	296	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTCTCTCTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	27147429	27165412	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
tx.109	chr1	-	2036	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	21	2563	-5	-17	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGGTTTTGAGCTACA	NA	False	NA	NA	False	NA	NA	NA	43866939	43788688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
tx.1090	chr10	+	962	3	FSM	ENSMUSG00000015312.10	ENSMUST00000220246.2	732	3	322	-552	322	0	multi-exon	FALSE	canonical	3	88	junction_2	12.5	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	658	False	NA	NA	False	NA	NA	NA	80766316	80768038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80766384_80766862_80767086_80767366
tx.10900	chr7	-	1693	2	Genic_Genomic	ENSMUSG00000082016.4	novel	765	1	NA	NA	-65	904	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATCTGAAAGAAAG	8892	False	NA	NA	False	NA	NA	NA	27170025	27168291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr7_-_27169781_27169821
tx.10901	chr7	+	1345	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	-13	-3	-13	3	multi-exon	FALSE	canonical	3	104	junction_1	0	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGTAATTAAATCTGTA	NA	False	NA	NA	False	NA	NA	NA	27173179	27176792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27173297_27175564
tx.10902	chr7	+	1190	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	43	0	43	0	multi-exon	FALSE	canonical	3	24	junction_1	0	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTTCTTTGCAT	6632	False	NA	NA	False	NA	NA	NA	27186377	27189741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27186504_27188677
tx.10903	chr7	-	1884	12	ISM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	10412	4	-55	-4	3prime_fragment	FALSE	canonical	3	435	junction_11	36.0309784069025	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGGTATGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	27242225	27231428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168
tx.10904	chr7	-	2111	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	167	4	-29	-4	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGGTATGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	27252470	27231428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
tx.10905	chr7	-	2037	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-30	-4	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	130.304211367093	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGGTATGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	27252471	27231428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27252422
tx.10906	chr7	+	2657	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	44	0	7	0	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	440	False	NA	NA	False	NA	NA	NA	27252701	27281524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
tx.10907	chr7	+	428	2	FSM	ENSMUSG00000049643.16	ENSMUST00000190903.2	426	2	-2	0	1	0	multi-exon	FALSE	canonical	2	8	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTGTGTTTGTT	431	False	NA	NA	False	NA	NA	NA	27252692	27253496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27252779_27253154
tx.10908	chr7	+	1985	11	FSM	ENSMUSG00000049643.16	ENSMUST00000187960.7	1989	11	4	0	4	0	multi-exon	FALSE	canonical	3	17	junction_10	97.3365296278843	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	453	False	NA	NA	False	NA	NA	NA	27252714	27281524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761_27280117_27280775
tx.10909	chr7	+	3020	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	150	1374	-44	-1	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGTCCACATTTCCTT	NA	False	NA	NA	False	NA	NA	NA	27291126	27338877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
tx.1091	chr10	-	1433	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	111	2252	-7	-2249	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGCCATGTCACCTCA	NA	False	NA	NA	False	NA	NA	NA	80873149	80866623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
tx.10910	chr7	+	1757	4	ISM	ENSMUSG00000004056.16	ENSMUST00000085917.5	1392	12	27643	-1283	252	0	3prime_fragment	FALSE	canonical	3	428	junction_1	63.6151624134442	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	27335729	27338878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_27335904_27336347_27336436_27336516_27336620_27337486
tx.10911	chr7	+	883	3	FSM	ENSMUSG00000007944.9	ENSMUST00000008088.9	2052	3	31	1138	31	-1138	multi-exon	FALSE	canonical	3	10	junction_1	3	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTTGTGTGGTCTTA	NA	False	NA	NA	False	NA	NA	NA	27353370	27355633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27353773_27354336_27354520_27355335
tx.10912	chr7	+	3837	4	NNC	ENSMUSG00000037640.16	novel	5896	5	NA	NA	196	1228	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	74.6562492732896	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGGCTCCATTTTC	NA	False	NA	NA	False	NA	NA	NA	27436576	27451114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_27436666_27437727_27437855_27440381_27440481_27447592
tx.10913	chr7	+	361	3	FSM	ENSMUSG00000109143.2	ENSMUST00000208208.2	632	3	28	243	28	99	multi-exon	FALSE	canonical	2	10	junction_1	10	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTGGTGTCCCATG	2463	False	NA	NA	False	NA	NA	NA	27465125	27470154	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27465209_27468664_27468718_27469929
tx.10914	chr7	+	3794	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	-21	-336	-21	336	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTTTATTTTGCAT	387	False	NA	NA	False	NA	NA	NA	27538010	27556199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
tx.10915	chr7	+	560	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	0	2951	0	-1693	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCAGTTTTACTAGTG	3327	False	NA	NA	False	NA	NA	NA	27560009	27577299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
tx.10916	chr7	-	3700	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	-23	263	1	-263	multi-exon	FALSE	canonical	3	18	junction_4	22.29798197147	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCAGTGCCCATGTTCT	NA	False	NA	NA	False	NA	NA	NA	27678595	27661048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
tx.10917	chr7	-	3450	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	4	-498	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTCTCATCTTGCTAGT	NA	False	NA	NA	False	NA	NA	NA	27678592	27661283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
tx.10918	chr7	-	3999	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-49	1650	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	28.6454184818445	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAGTCCATTAAATATT	NA	False	NA	NA	False	NA	NA	NA	27713589	27686486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713445
tx.10919	chr7	-	1406	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	34	0	-11	0	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	867	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	27749492	27741131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
tx.1092	chr10	-	1975	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	-5	-6	-2	4	multi-exon	TRUE	canonical	3	688	junction_11	105.465203223192	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4767	False	NA	NA	False	NA	NA	NA	80896017	80879904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
tx.10920	chr7	+	1024	3	ISM	ENSMUSG00000078776.10	ENSMUST00000150948.2	7895	19	32574	-16	32574	0	3prime_fragment	FALSE	canonical	3	5	junction_2	2.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTCTCCTGCTGTCT	1211	False	NA	NA	False	NA	NA	NA	27861814	27864236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_27862400_27863693_27863966_27864069
tx.10921	chr7	+	1185	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	12	0	0	0	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	771	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8543	False	NA	NA	False	NA	NA	NA	27869146	27878694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
tx.10922	chr7	-	1497	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	16	2	0	-2	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	604	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGCCGTGTGTGGCTCT	2672	False	NA	NA	False	NA	NA	NA	28011481	28004942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
tx.10923	chr7	-	3737	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	158.096782360023	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	28038109	28014318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776
tx.10924	chr7	-	3549	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	156.353178178541	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	28038180	28014318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
tx.10925	chr7	+	589	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	61	459	-50	0	multi-exon	FALSE	canonical	3	19383	junction_3	806.134294023024	2577	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	28050137	28052121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
tx.10926	chr7	-	1795	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	998	-3	0	3	multi-exon	FALSE	canonical	3	36	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATTTGTCTTTTTCGCG	6671	False	NA	NA	False	NA	NA	NA	28078680	28076205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28077919_28078598
tx.10927	chr7	-	673	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	18	590	18	-590	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	257	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGGTTCCTGTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	28092115	28086160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
tx.10928	chr7	+	1983	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	15	5	4	0	multi-exon	FALSE	canonical	3	164	junction_5	16.9726546514433	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTCCTAAAGTCTCT	584	False	NA	NA	False	NA	NA	NA	28092390	28098808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
tx.10929	chr7	+	652	7	FSM	ENSMUSG00000060791.16	ENSMUST00000108292.9	657	7	8	-3	8	3	multi-exon	FALSE	canonical	3	339	junction_1	45.6070170039655	166	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTATCTGCAAAATCTG	1823	False	NA	NA	False	NA	NA	NA	28136879	28145974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
tx.1093	chr10	-	1976	12	FSM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	-5	-2	-2	2	multi-exon	FALSE	canonical	3	182	junction_9	245.943486083912	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGCTTCCTGTGTCA	4767	False	NA	NA	False	NA	NA	NA	80896017	80879906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895961
tx.10930	chr7	-	366	2	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGCCTACACCAGTAAG	NA	False	NA	NA	False	NA	NA	NA	28182631	28179952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_28180257_28182569
tx.10931	chr7	+	945	2	FSM	ENSMUSG00000099417.2	ENSMUST00000190841.2	971	2	43	-17	43	17	multi-exon	FALSE	canonical	3	6	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATTAGTCCATCCAGGT	4435	False	NA	NA	False	NA	NA	NA	28192017	28197155	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28192135_28196327
tx.10932	chr7	-	1388	6	FSM	ENSMUSG00000047586.5	ENSMUST00000239002.2	1531	6	143	0	143	0	multi-exon	FALSE	canonical	3	10	junction_1	2.92574776766556	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCAGAGGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	28246536	28243020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28243698_28243846_28243986_28244663_28244760_28245580_28245633_28245714_28245778_28246175
tx.10933	chr7	+	2023	6	NIC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-74	0	combination_of_known_junctions	TRUE	canonical	3	31	junction_1	12.2637677734047	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCATATCTTTTTCTT	8771	False	NA	NA	False	NA	NA	NA	28392199	28398763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
tx.10934	chr7	+	1985	7	FSM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	-27	0	-27	0	multi-exon	FALSE	canonical	3	89	junction_6	22.6838170411321	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416201	28437569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
tx.10935	chr7	+	1866	8	FSM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	-54	-6	-26	0	multi-exon	FALSE	canonical	3	49	junction_7	33.4310133418242	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416202	28437569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
tx.10936	chr7	+	1653	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	-90	0	-21	0	multi-exon	FALSE	canonical	3	40	junction_6	37.5340586075574	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416207	28437569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
tx.10937	chr7	-	880	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	3	0	3	0	multi-exon	FALSE	canonical	3	939	junction_1	0	311	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1697	False	NA	NA	False	NA	NA	NA	28441192	28439065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28439665_28440911
tx.10938	chr7	-	710	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	13	-1	13	0	multi-exon	FALSE	canonical	3	503	junction_2	218	467	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1657	False	NA	NA	False	NA	NA	NA	28441232	28439065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28439665_28440911_28440980_28441189
tx.10939	chr7	+	1864	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	-12	16	-2	-16	multi-exon	TRUE	canonical	3	180	junction_5	21.0516824347446	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTGGATCCATGAGCA	266	False	NA	NA	False	NA	NA	NA	28441414	28453280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
tx.1094	chr10	+	2429	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	64	339	-28	-339	multi-exon	TRUE	canonical	3	459	junction_3	51.2387521532504	154	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5514	False	NA	NA	False	NA	NA	NA	80905932	80918054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
tx.10940	chr7	-	1212	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	20	11	20	-11	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	384	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGACTGACCCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	28465919	28458467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
tx.10941	chr7	+	1775	15	FSM	ENSMUSG00000015149.15	ENSMUST00000122915.8	1828	15	53	0	21	0	multi-exon	FALSE	canonical	3	61	junction_1	14.0365775815931	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTTGTGTGGCCTCT	NA	False	NA	NA	False	NA	NA	NA	28466212	28488085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
tx.10942	chr7	+	2086	5	ISM	ENSMUSG00000051735.8	ENSMUST00000209035.2	2898	12	7027	0	-942	0	3prime_fragment	FALSE	canonical	3	40	junction_1	3.11247489949718	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACGAGCAATGGAGGTGC	NA	False	NA	NA	False	NA	NA	NA	28495420	28498379	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_28495772_28496077_28496372_28496534_28496667_28496984_28497149_28497234
tx.10943	chr7	+	1017	6	ISM	ENSMUSG00000015165.17	ENSMUST00000174882.8	1850	13	5443	0	954	0	3prime_fragment	FALSE	canonical	3	4757	junction_1	533.031931501294	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	NA	False	NA	NA	NA	28518212	28521674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
tx.10944	chr7	+	1177	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	91	-1	-41	1	multi-exon	TRUE	canonical	3	645	junction_5	36.3137901908447	383	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTTTACTGCAGT	NA	False	NA	NA	False	NA	NA	NA	28524732	28531673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
tx.10945	chr7	+	737	4	ISM	ENSMUSG00000054083.9	ENSMUST00000066880.6	3040	21	37	10390	37	-7784	5prime_fragment	FALSE	canonical	1	1	junction_2	0.471404520791032	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGCGTGAGGGGAAG	NA	False	NA	NA	False	NA	NA	NA	28580883	28582598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_28581386_28581975_28582046_28582194_28582314_28582552
tx.10946	chr7	-	1735	6	ISM	ENSMUSG00000054808.16	ENSMUST00000144909.8	2581	14	9509	-405	317	0	3prime_fragment	FALSE	canonical	3	1402	junction_2	86.8456101366097	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	857	False	NA	NA	False	NA	NA	NA	28597301	28592672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273
tx.10947	chr7	-	3836	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	35	6	35	-6	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTCTGGTGTCATCT	NA	False	NA	NA	False	NA	NA	NA	28661730	28592678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
tx.10948	chr7	-	774	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	1340	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	False	NA	NA	False	NA	NA	NA	28681239	28670796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
tx.10949	chr7	+	2753	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	-28	-1	-28	0	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	28682224	28702704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
tx.1095	chr10	+	1356	11	NNC	ENSMUSG00000035027.19	novel	662	7	NA	NA	322	5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	211.816524379001	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGCTCCTGCCCATTG	1852	False	NA	NA	False	NA	NA	NA	80942500	80959722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_80942588_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
tx.10950	chr7	+	1618	19	ISM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	8136	-1	8103	0	3prime_fragment	FALSE	canonical	3	103	junction_4	25.3179778023443	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	28690388	28702704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
tx.10951	chr7	+	1557	18	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	8116	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	42.0851830191789	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTCTCGGAGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	28690401	28702700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_28690472_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
tx.10952	chr7	+	501	2	NNC	ENSMUSG00000109017.2	novel	698	3	NA	NA	-4872	-187	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTTGTGTGATACCAC	6722	False	NA	NA	False	NA	NA	NA	28723575	28729488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_28723778_28729189
tx.10953	chr7	+	280	2	Antisense	novelGene_ENSMUSG00000030592.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGTTTTCACAGTCA	4186	False	NA	NA	False	NA	NA	NA	28746180	28746558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr7_+_28746292_28746389
tx.10954	chr7	+	2057	16	ISM	ENSMUSG00000030589.16	ENSMUST00000159975.8	2296	17	2684	0	2544	0	3prime_fragment	TRUE	non_canonical	0	0	junction_2	17.9245331567907	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	397	False	NA	NA	False	NA	NA	NA	28837041	28851046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
tx.10955	chr7	+	2024	16	ISM	ENSMUSG00000030589.16	ENSMUST00000032811.12	4621	17	2702	2340	2562	0	3prime_fragment	FALSE	non_canonical	0	0	junction_2	15.5905954558082	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	415	False	NA	NA	False	NA	NA	NA	28837059	28851046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
tx.10956	chr7	-	1378	2	ISM	ENSMUSG00000030590.16	ENSMUST00000153251.8	791	5	1358	-44	1242	0	3prime_fragment	FALSE	canonical	3	299	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	NA	False	NA	NA	NA	28853786	28851934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_28852273_28852746
tx.10957	chr7	-	1343	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	257	junction_3	24.5877114745467	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	NA	False	NA	NA	NA	28855634	28851934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855456_28855554
tx.10958	chr7	-	1282	8	FSM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	11	0	11	0	multi-exon	FALSE	canonical	3	257	junction_3	23.9565934002925	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	NA	False	NA	NA	NA	28855648	28851934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
tx.10959	chr7	-	1297	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	37	57	-34	-57	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	507	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTTGTCTATGGGCTA	NA	False	NA	NA	False	NA	NA	NA	28879940	28873669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
tx.1096	chr10	+	592	5	ISM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	13598	4	205	-4	3prime_fragment	FALSE	canonical	3	562	junction_1	85.9981831203427	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGCTGCGGCTGTGCTCC	NA	False	NA	NA	False	NA	NA	NA	80955378	80959713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
tx.10960	chr7	+	1124	8	FSM	ENSMUSG00000030588.13	ENSMUST00000108238.8	1126	8	2	0	2	0	multi-exon	FALSE	canonical	3	755	junction_1	273.775194535329	769	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6039	False	NA	NA	False	NA	NA	NA	28937755	28946954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
tx.10961	chr7	-	452	4	FSM	ENSMUSG00000030587.6	ENSMUST00000032808.6	1466	4	54	960	54	51	multi-exon	FALSE	canonical	3	53	junction_3	7.36357401145817	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTATTGTTGCGGGT	1837	False	NA	NA	False	NA	NA	NA	28947837	28946945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28947160_28947321_28947391_28947552_28947666_28947781
tx.10962	chr7	-	1142	7	FSM	ENSMUSG00000074227.13	ENSMUST00000098604.12	1384	7	242	0	240	0	multi-exon	FALSE	canonical	0	0	junction_2	452.801066204084	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	709	False	NA	NA	False	NA	NA	NA	28981095	28955765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
tx.10963	chr7	-	971	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	240	0	240	0	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	709	False	NA	NA	False	NA	NA	NA	28981095	28955765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
tx.10964	chr7	-	889	6	NNC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	237	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	491.498931840141	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	706	False	NA	NA	False	NA	NA	NA	28981098	28955765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_28956178_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
tx.10965	chr7	+	545	4	FSM	ENSMUSG00000037166.6	ENSMUST00000048187.6	950	4	-4	409	0	-409	multi-exon	FALSE	canonical	3	93	junction_2	2.05480466765633	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCCGGATTTTCCT	4003	False	NA	NA	False	NA	NA	NA	28988732	28992817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_28988961_28990934_28991016_28991475_28991509_28992614
tx.10966	chr7	+	2225	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	24	1864	24	-1864	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATTCTATTACCAGTA	NA	False	NA	NA	False	NA	NA	NA	29468000	29477382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
tx.10967	chr7	+	1561	4	ISM	ENSMUSG00000047473.15	ENSMUST00000032803.12	3558	5	8	4912	8	-2122	5prime_fragment	FALSE	canonical	3	6	junction_3	9.62635271879577	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATTTGTATGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	29483430	29489215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_29484327_29485643_29485729_29487473_29487601_29488762
tx.10968	chr7	+	2944	4	FSM	ENSMUSG00000058402.15	ENSMUST00000074876.13	2537	4	-6	-401	-6	79	multi-exon	FALSE	canonical	3	31	junction_2	4.02768199119819	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGATCGGTGTTCGACC	NA	False	NA	NA	False	NA	NA	NA	29559397	29576331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29559519_29560440_29560494_29572316_29572359_29573603
tx.10969	chr7	-	3149	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	2	-1	2	0	multi-exon	FALSE	canonical	2	2	junction_4	19.4084388862165	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTTCTCTTCTGTCACT	NA	False	NA	NA	False	NA	NA	NA	29605527	29593139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
tx.1097	chr10	-	2370	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	178	23	-31	-23	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	198	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTCAGTCCGGCATCT	NA	False	NA	NA	False	NA	NA	NA	81003579	80989122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
tx.10970	chr7	+	1600	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	25	989	25	-989	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGCATTGTTTGACTA	NA	False	NA	NA	False	NA	NA	NA	29607966	29615243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
tx.10971	chr7	+	1044	4	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-27	247	combination_of_known_junctions	FALSE	canonical	3	234	junction_3	16.0485374896143	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATATTCATGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	29683352	29688924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473
tx.10972	chr7	-	515	6	NIC	ENSMUSG00000053985.11	novel	3411	5	NA	NA	4	-1255	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	3.65513337649941	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTGGTCTTAGTGATG	NA	False	NA	NA	False	NA	NA	NA	29750794	29738732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864_29749929_29750769
tx.10973	chr7	-	2181	7	FSM	ENSMUSG00000098022.8	ENSMUST00000080834.15	2181	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	14.682756326158	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCCACTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	29772325	29755461	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29772205
tx.10974	chr7	-	2064	6	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	15.0332963783729	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATATAATGTGTTCCACT	NA	False	NA	NA	False	NA	NA	NA	29772325	29755467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29772205
tx.10975	chr7	-	1706	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	3	0	3	0	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTGTGTGGCAGTGTAA	9926	False	NA	NA	False	NA	NA	NA	29789949	29776761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
tx.10976	chr7	+	3633	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	373	0	-2	0	multi-exon	FALSE	canonical	3	89	junction_1	24	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTTGTTTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	29794591	29807047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29794637_29798952_29799148_29803654
tx.10977	chr7	+	2297	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	12	-192	12	192	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACCGCAGCTCTGACTT	5271	False	NA	NA	False	NA	NA	NA	29821378	29834567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
tx.10978	chr7	-	2828	2	FSM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	-17	-782	6	782	multi-exon	FALSE	canonical	3	29	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAATCCTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	29869169	29859911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_29862654_29869083
tx.10979	chr7	-	1129	3	FSM	ENSMUSG00000037029.9	ENSMUST00000136508.3	585	3	-51	-493	8	493	multi-exon	FALSE	canonical	1	5	junction_1	4.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAGGAGTGTGGGAAA	NA	False	NA	NA	False	NA	NA	NA	29869167	29861655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_29862654_29862751_29862799_29869083
tx.1098	chr10	+	3074	14	FSM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	15	0	15	0	multi-exon	TRUE	canonical	3	5618	junction_10	706.418033369635	1479	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	NA	False	NA	NA	NA	81012479	81018332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
tx.10980	chr7	+	1818	3	FSM	ENSMUSG00000066647.9	ENSMUST00000209028.2	5117	3	-1	3300	-1	164	multi-exon	FALSE	canonical	3	26	junction_2	2	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAAGACCCATTAATG	9188	False	NA	NA	False	NA	NA	NA	29869298	29878449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29869640_29875275_29875372_29877068
tx.10981	chr7	+	366	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	27	0	-23	0	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	285	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTCCAGCCTGTGTGT	5701	False	NA	NA	False	NA	NA	NA	29883595	29885455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
tx.10982	chr7	-	1260	9	FSM	ENSMUSG00000001794.14	ENSMUST00000207082.2	1241	9	-25	6	-25	0	multi-exon	FALSE	canonical	3	1474	junction_7	82.1492544092763	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	29892422	29886366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291
tx.10983	chr7	-	1344	10	ISM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	990	-1	-277	0	3prime_fragment	FALSE	canonical	3	1106	junction_9	168.3138602598	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	29893483	29886366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302
tx.10984	chr7	-	1459	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	-29	-1	-29	0	multi-exon	FALSE	canonical	3	766	junction_10	279.009032111866	305	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	29894502	29886366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
tx.10985	chr7	-	918	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	498	0	498	0	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	479	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAGTCTCTTGATTCC	NA	False	NA	NA	False	NA	NA	NA	29931199	29923555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
tx.10986	chr7	+	903	5	FSM	ENSMUSG00000019738.16	ENSMUST00000108192.2	508	5	-391	-4	-7	0	multi-exon	FALSE	canonical	3	1146	junction_4	46.0672063403024	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCGTGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	29931365	29932815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
tx.10987	chr7	+	811	6	NIC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	481.665610148784	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	29931351	29932812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_29931804_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
tx.10988	chr7	+	836	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	583	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCGTGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	29931355	29932815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
tx.10989	chr7	+	919	5	FSM	ENSMUSG00000019738.16	ENSMUST00000138118.8	435	5	-419	-65	-17	0	multi-exon	FALSE	canonical	3	1146	junction_4	46.6717259162333	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCGTGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	29931355	29932815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_29931830_29931906_29931962_29932174_29932407_29932491_29932544_29932709
tx.1099	chr10	+	729	2	ISM	ENSMUSG00000034994.11	ENSMUST00000219497.2	651	3	456	-464	456	0	3prime_fragment	FALSE	canonical	3	7978	junction_1	0	799	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	7057	False	NA	NA	False	NA	NA	NA	81017340	81018332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_81017460_81017722
tx.10990	chr7	-	2581	13	ISM	ENSMUSG00000037020.17	ENSMUST00000145027.8	4768	33	5	14913	5	-5229	5prime_fragment	TRUE	canonical	1	41	junction_2	40.4621736934634	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTAAGGTGGAAG	NA	False	NA	NA	False	NA	NA	NA	29979816	29954475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
tx.10991	chr7	+	960	7	NNC	ENSMUSG00000042831.14	novel	982	7	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	171.158471079354	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30008190	30013729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30011988_30012133_30013343
tx.10992	chr7	+	1138	6	FSM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	-25	-1	-14	0	multi-exon	FALSE	canonical	3	431	junction_1	28.3125413906982	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30008187	30013729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30013343
tx.10993	chr7	+	933	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	49	0	-11	0	multi-exon	FALSE	canonical	3	231	junction_5	88.8144132446981	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30008190	30013729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
tx.10994	chr7	+	1008	7	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	165.266451526013	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30008200	30013729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30011930_30012133_30013343
tx.10995	chr7	+	2311	6	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	156	junction_2	32.932658562588	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	NA	False	NA	NA	NA	30014235	30018471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30017468_30018097_30018157_30018248
tx.10996	chr7	+	1106	7	FSM	ENSMUSG00000019737.15	ENSMUST00000176304.8	1006	7	-100	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	73.2385751423994	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	NA	False	NA	NA	NA	30014240	30018471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30017392_30017468_30018097_30018157_30018248
tx.10997	chr7	+	1344	8	FSM	ENSMUSG00000019737.15	ENSMUST00000054594.15	1355	8	11	0	11	0	multi-exon	FALSE	canonical	3	130	junction_4	40.5593543401494	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	NA	False	NA	NA	NA	30014251	30018471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
tx.10998	chr7	-	977	6	ISM	ENSMUSG00000006651.9	ENSMUST00000208792.2	2472	16	8438	-6	-48	0	3prime_fragment	FALSE	canonical	3	430	junction_4	31.3496411462715	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	30136476	30134406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211
tx.10999	chr7	+	2817	19	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5739	24	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	14.2837212013545	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGGATGCCCCAGTGG	NA	False	NA	NA	False	NA	NA	NA	30164888	30186672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_30165078_30165176_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
tx.11	chr1	+	1658	12	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	4	-163	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	26.0923344558392	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	NA	NA	NA	9618283	9646963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
tx.110	chr1	-	1700	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-2	-365	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	52.099394802392	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTATAAAAGTGGGT	NA	False	NA	NA	False	NA	NA	NA	43866936	43789036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
tx.1100	chr10	+	1666	13	FSM	ENSMUSG00000004933.18	ENSMUST00000105328.10	2228	13	177	385	28	-1	multi-exon	FALSE	canonical	2	5	junction_9	3.36237350030534	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACTGTCTGATGCCTGT	NA	False	NA	NA	False	NA	NA	NA	81093309	81098814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81093409_81094313_81094374_81095010_81095122_81095216_81095333_81095420_81095641_81095922_81096017_81096741_81096808_81097276_81097377_81097464_81097550_81097628_81097703_81097794_81097991_81098281_81098369_81098456
tx.11000	chr7	+	1827	13	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	10863	-12	-3920	12	3prime_fragment	FALSE	canonical	2	35	junction_6	9.85308750257163	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTCCAAGCCAAAGG	126	False	NA	NA	False	NA	NA	NA	30170012	30186660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
tx.11001	chr7	+	849	5	ISM	ENSMUSG00000006649.18	ENSMUST00000149086.2	752	9	3875	-354	-3175	12	3prime_fragment	FALSE	canonical	3	56	junction_2	4.89897948556636	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTCCAAGCCAAAGG	NA	False	NA	NA	False	NA	NA	NA	30181164	30186660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
tx.11002	chr7	+	1283	3	FSM	ENSMUSG00000036854.15	ENSMUST00000123355.8	1298	3	16	-1	16	0	multi-exon	FALSE	canonical	3	18	junction_1	8.5	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	30251964	30254865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_30252153_30253686_30253810_30253893
tx.11003	chr7	+	2088	3	FSM	ENSMUSG00000106236.3_ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	-728	3	16	0	multi-exon	FALSE	canonical	3	14	junction_1	10.5	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	30251964	30254865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_30252958_30253686_30253810_30253893
tx.11004	chr7	-	998	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	-1	1	-1	-1	multi-exon	FALSE	canonical	3	222	junction_2	22.8363744933385	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAATCTCAAGTGCATTT	4884	False	NA	NA	False	NA	NA	NA	30259072	30254866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
tx.11005	chr7	-	668	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	40	0	40	0	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	310	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTTCTTGGGATCTT	1330	False	NA	NA	False	NA	NA	NA	30262626	30261289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
tx.11006	chr7	+	874	8	FSM	ENSMUSG00000078765.12	ENSMUST00000043273.16	884	8	9	1	0	0	multi-exon	FALSE	canonical	3	411	junction_1	81.3154602866678	212	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGGTTTCCTTCCAC	NA	False	NA	NA	False	NA	NA	NA	30262754	30264789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
tx.11007	chr7	-	1610	6	NNC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	30.1038203555628	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	NA	False	NA	NA	NA	30298308	30289105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290719_30291391_30298204
tx.11008	chr7	-	1868	6	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	21.6277599394852	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	NA	False	NA	NA	NA	30298328	30289105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30298204
tx.11009	chr7	-	965	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	27.8960122598195	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	NA	False	NA	NA	NA	30298334	30289105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30298204
tx.1101	chr10	+	1839	11	NIC	ENSMUSG00000004933.18	novel	2228	13	NA	NA	28	1	intron_retention	FALSE	canonical	2	6	junction_6	3.13687742827162	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGTCTGATGCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	81093309	81098816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_81093409_81094313_81094374_81095010_81095122_81095216_81095333_81095420_81095641_81095922_81096017_81096741_81096808_81097276_81097377_81097464_81097991_81098281_81098369_81098456
tx.11010	chr7	-	954	4	ISM	ENSMUSG00000006313.6	ENSMUST00000006476.6	1421	8	5844	-10	5844	10	3prime_fragment	FALSE	canonical	3	18	junction_3	10.6144555520604	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTTGTTCTGTTCTGTT	7751	False	NA	NA	False	NA	NA	NA	30306428	30302506	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_30303068_30303196_30303281_30304485_30304666_30306299
tx.11011	chr7	-	837	3	ISM	ENSMUSG00000006313.6	ENSMUST00000006476.6	1421	8	7593	-8	7593	8	3prime_fragment	FALSE	canonical	3	31	junction_1	6.5	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGTTCTGTTCTG	9500	False	NA	NA	False	NA	NA	NA	30304679	30302508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_30303068_30303196_30303281_30304485
tx.11012	chr7	-	488	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	18	112	18	1	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	1724	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTGTGTATTACACA	NA	False	NA	NA	False	NA	NA	NA	30325558	30316397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
tx.11013	chr7	-	525	3	ISM	ENSMUSG00000006311.9	ENSMUST00000108147.3	1048	6	1053	-6	1053	6	3prime_fragment	FALSE	canonical	3	44	junction_1	1	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAACCTGCGTGTCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	30334224	30333034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_30333260_30333413_30333527_30334037
tx.11014	chr7	-	1628	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	156	0	-17	0	multi-exon	TRUE	canonical	3	640	junction_5	133.345925331332	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3767	False	NA	NA	False	NA	NA	NA	30349586	30340425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
tx.11015	chr7	-	1544	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	-20	2	-20	0	multi-exon	FALSE	canonical	3	345	junction_5	209.790818435889	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3764	False	NA	NA	False	NA	NA	NA	30349589	30340425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
tx.11016	chr7	-	2182	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	10	-5	10	0	multi-exon	FALSE	canonical	3	112	junction_13	34.9573373142001	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	NA	False	NA	NA	NA	30364409	30353135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
tx.11017	chr7	-	847	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	27	-4	-4	0	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	209	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9284	False	NA	NA	False	NA	NA	NA	30428938	30427125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
tx.11019	chr7	+	2119	6	FSM	ENSMUSG00000074199.8	ENSMUST00000190990.7	403	6	-1711	-5	-1702	-1	multi-exon	FALSE	canonical	3	20	junction_5	24.1694021440333	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGAATCTGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	30485618	30490513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490397
tx.1102	chr10	-	588	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	8	8	-2	-8	multi-exon	FALSE	canonical	3	958	junction_1	11.5	280	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCACATGTGTGTCAT	3102	False	NA	NA	False	NA	NA	NA	81102760	81100554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81100832_81101484_81101642_81102606
tx.11020	chr7	+	461	6	FSM	ENSMUSG00000074199.8	ENSMUST00000098559.3	470	6	-3	12	-3	0	multi-exon	FALSE	canonical	3	54	junction_5	10.9105453575887	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCTGAATCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	30487326	30490510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490344
tx.11022	chr7	-	1199	4	ISM	ENSMUSG00000058239.14	ENSMUST00000167285.8	1968	7	1136	740	410	582	3prime_fragment	FALSE	canonical	3	80	junction_3	25.4863798048204	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGTCCATGTTGG	5791	False	NA	NA	False	NA	NA	NA	30654465	30645416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168
tx.11023	chr7	-	313	2	ISM	ENSMUSG00000001247.17	ENSMUST00000205961.2	2021	10	15148	-4	15148	0	3prime_fragment	FALSE	canonical	3	173	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	7393	False	NA	NA	False	NA	NA	NA	30657599	30657199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_30657327_30657413
tx.11024	chr7	-	1970	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	103	-2	-2	0	multi-exon	TRUE	canonical	3	93	junction_6	34.291945118351	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	30672749	30657199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
tx.11026	chr7	-	536	5	NNC	ENSMUSG00000009687.15	novel	593	5	NA	NA	852	-2	intron_retention	FALSE	canonical	3	42	junction_4	22.1923410211721	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCTGTCTTCTGTGAA	7712	False	NA	NA	False	NA	NA	NA	30736511	30732152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736452
tx.11028	chr7	-	2555	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	18	6	18	-6	multi-exon	FALSE	canonical	0	0	junction_4	386.788858543974	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTGTTGCCCTAGT	NA	False	NA	NA	False	NA	NA	NA	33867982	33840118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
tx.11029	chr7	-	1164	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	-1	132	-1	2	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	470	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTTTACCTTATTT	5731	False	NA	NA	False	NA	NA	NA	33896087	33884055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
tx.1103	chr10	+	2064	11	FSM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	32	10	-17	0	multi-exon	FALSE	canonical	3	174	junction_1	25.7441255435099	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1352	False	NA	NA	False	NA	NA	NA	81104037	81109070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
tx.11030	chr7	-	2037	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	44	803	-3	26	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	502	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCAGTACTTTTATCT	NA	False	NA	NA	False	NA	NA	NA	33929717	33901557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
tx.11031	chr7	+	716	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	4	3455	4	1200	multi-exon	FALSE	canonical	3	45	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGCTTTAAAAGTAAGATA	NA	False	NA	NA	False	NA	NA	NA	33933805	33936177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_33933921_33935576
tx.11032	chr7	-	781	2	FSM	ENSMUSG00000066571.14	ENSMUST00000206018.2	2055	2	-16	1290	-15	229	multi-exon	FALSE	canonical	3	60	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCAGAACCCTGACCTG	9793	False	NA	NA	False	NA	NA	NA	34012991	33984672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_33985379_34012916
tx.11033	chr7	-	1476	3	ISM	ENSMUSG00000066568.13	ENSMUST00000205519.2	647	7	19749	-1292	2104	0	3prime_fragment	FALSE	canonical	3	635	junction_2	30.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAACTATTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	34050816	34044070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_34045384_34047350_34047408_34050710
tx.11034	chr7	-	1894	5	ISM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	35887	16	-244	1	3prime_fragment	FALSE	canonical	3	572	junction_4	46.1573396113771	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCCAAAGATTTCAATATT	NA	False	NA	NA	False	NA	NA	NA	34053225	34044086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089
tx.11035	chr7	+	1853	15	FSM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	28	0	28	0	multi-exon	FALSE	canonical	3	282	junction_1	31.3925930429327	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCCATCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	34611831	34744133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
tx.11036	chr7	+	1497	8	ISM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	56901	2	-3	-1	3prime_fragment	FALSE	canonical	3	314	junction_5	28.3541740079564	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTGCCCATCTTCC	8717	False	NA	NA	False	NA	NA	NA	34668704	34744131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
tx.11037	chr7	-	3063	20	FSM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	2	0	2	0	multi-exon	FALSE	canonical	3	140	junction_17	13.3084023611853	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCTTGATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	35017863	34975960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
tx.11038	chr7	+	3400	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	106	2	-54	-2	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTCTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	35033700	35091712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
tx.11039	chr7	+	3078	16	NNC	ENSMUSG00000030494.14	novel	3046	16	NA	NA	-43	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.2524642836577	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTCTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	35033711	35091712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090714_35091024
tx.1104	chr10	+	444	3	ISM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	4414	10	-32	0	3prime_fragment	FALSE	canonical	3	247	junction_1	4.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	2451	False	NA	NA	False	NA	NA	NA	81108419	81109070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_81108538_81108655_81108794_81108882
tx.11040	chr7	-	1441	5	NNC	ENSMUSG00000030493.14	novel	831	5	NA	NA	27	34	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_4	61.4913611818766	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGACTTTATTTAAATATT	NA	False	NA	NA	False	NA	NA	NA	35096234	35091695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637_35095841_35096110
tx.11041	chr7	-	1704	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	27	126	27	27	multi-exon	FALSE	canonical	3	143	junction_2	4.92160768674447	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAACATGACTTTATTT	NA	False	NA	NA	False	NA	NA	NA	35096234	35091702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
tx.11042	chr7	-	1345	5	FSM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	-101	-413	27	22	multi-exon	FALSE	canonical	3	12	junction_4	59.3316947339278	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACAATGAACATGACTT	NA	False	NA	NA	False	NA	NA	NA	35096234	35091707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637_35095757_35096110
tx.11043	chr7	+	2593	19	FSM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	15	2	15	0	multi-exon	FALSE	canonical	2	65	junction_12	24.7032386540712	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	35096494	35138112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
tx.11044	chr7	+	547	2	ISM	ENSMUSG00000023072.15	ENSMUST00000150421.2	712	4	7135	-6	7135	0	3prime_fragment	FALSE	canonical	3	122	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	35134881	35138112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_35135069_35137752
tx.11045	chr7	-	1577	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	32	11	-20	-11	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTGCTTCTAAAATT	NA	False	NA	NA	False	NA	NA	NA	35237138	35193047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
tx.11046	chr7	-	1998	11	Fusion	ENSMUSG00000030491.17_ENSMUSG00000100068.2	novel	769	6	NA	NA	-11	115	multi-exon	FALSE	canonical	3	19	junction_1	140.882362274346	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGGTTAGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	35237129	35196764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr7_-_35197571_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
tx.11047	chr7	-	1447	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	844	7	-266	-7	multi-exon	FALSE	canonical	3	351	junction_1	2	278	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAAGTTGTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	35254885	35246616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_35247549_35250878_35251087_35254578
tx.11048	chr7	+	1912	12	FSM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	-3	17	3	-17	multi-exon	FALSE	canonical	3	240	junction_4	23.6388110621019	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGAGGAGAGTGAATTT	NA	False	NA	NA	False	NA	NA	NA	35285671	35308522	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
tx.11049	chr7	-	624	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	28	32	11	0	multi-exon	FALSE	canonical	3	1740	junction_2	86.0883267348135	566	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGGGTGTTTCAGAAT	NA	False	NA	NA	False	NA	NA	NA	35346918	35341438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
tx.1105	chr10	-	1643	13	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-28	626	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	36.7705913589772	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCCCACCCTATGGCCT	7812	False	NA	NA	False	NA	NA	NA	81121643	81113831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
tx.11050	chr7	-	1851	2	ISM	ENSMUSG00000030421.10	ENSMUST00000205927.2	2630	6	7018	-1	-82	0	3prime_fragment	FALSE	canonical	3	969	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	NA	False	NA	NA	NA	37662035	37659416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_37661123_37661890
tx.11051	chr7	-	2366	4	ISM	ENSMUSG00000030421.10	ENSMUST00000205927.2	2630	6	4119	2	268	-2	3prime_fragment	FALSE	canonical	3	929	junction_2	18.8561808316413	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGAGCCTGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	37664934	37659419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655
tx.11052	chr7	-	979	4	ISM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	8012	0	-21	0	3prime_fragment	FALSE	canonical	3	765	junction_3	44.4996878890428	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	False	NA	NA	False	NA	NA	NA	37798947	37797408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892
tx.11053	chr7	+	2151	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	155	976	-40	0	multi-exon	FALSE	canonical	3	43	junction_1	1.5	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTCATATCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	37883232	37896016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_37883325_37888030_37888202_37894128
tx.11054	chr7	-	1538	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	24	3701	24	-3701	multi-exon	FALSE	canonical	3	140	junction_1	0	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGATTGTTAAGAGT	NA	False	NA	NA	False	NA	NA	NA	37927416	37920096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_37921583_37927364
tx.11055	chr7	-	1240	7	FSM	ENSMUSG00000030423.8	ENSMUST00000032585.8	2113	7	45	828	-5	-828	multi-exon	FALSE	canonical	3	243	junction_2	18.1567251085284	318	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	NA	False	NA	NA	NA	37970802	37962247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968325_37968379_37970570
tx.11056	chr7	+	2198	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	-24	13847	-23	1532	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCCCATGAATGTAAAC	NA	False	NA	NA	False	NA	NA	NA	39201900	39216166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
tx.11057	chr7	-	2927	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	11	-867	11	0	multi-exon	FALSE	canonical	3	47	junction_4	16.2845785944863	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	41042792	41022346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
tx.11058	chr7	-	1920	4	FSM	ENSMUSG00000056383.11	ENSMUST00000071804.10	2671	4	-100	851	19	16	multi-exon	FALSE	canonical	3	26	junction_3	27.3901847788988	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGAGCGCTGTGGGAGC	NA	False	NA	NA	False	NA	NA	NA	41042784	41023197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41042650
tx.11059	chr7	-	2925	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	482	4	0	-4	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAATTTGCTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	41148832	41128301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
tx.1106	chr10	+	2611	9	FSM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	104	0	104	0	multi-exon	FALSE	canonical	3	160	junction_2	15.2786615905975	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	5573	False	NA	NA	False	NA	NA	NA	81157040	81162076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
tx.11060	chr7	-	1340	2	FSM	ENSMUSG00000074166.8	ENSMUST00000205995.2	1337	2	0	-3	0	3	multi-exon	FALSE	canonical	2	6	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGATGGTGCTGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	41148832	41139267	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_41140493_41148717
tx.11061	chr7	-	2831	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	-7	-1394	-7	1394	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTTCTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	41210260	41193703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
tx.11062	chr7	+	4004	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	NA	False	NA	NA	NA	41248684	41277957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
tx.11063	chr7	+	609	5	NIC	ENSMUSG00000074165.11	novel	813	6	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	15.3683928893037	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGAATTCTGTTACAAG	NA	False	NA	NA	False	NA	NA	NA	41282957	41297776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_41283119_41292756_41292857_41296914_41297042_41297242_41297304_41297616
tx.11064	chr7	+	1257	4	FSM	ENSMUSG00000074165.11	ENSMUST00000045720.14	3058	4	-424	2225	-63	-291	multi-exon	FALSE	canonical	3	13	junction_1	14.6363322667334	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAATAACTCATTCCAA	NA	False	NA	NA	False	NA	NA	NA	41282563	41298130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_41283119_41296914_41297042_41297242_41297304_41297616
tx.11065	chr7	+	645	5	NIC	ENSMUSG00000074165.11	novel	3177	6	NA	NA	-4	40	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	14.5344418537486	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAGTAGGTCTTATAAC	NA	False	NA	NA	False	NA	NA	NA	41282975	41297822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_41283119_41292756_41292857_41296906_41297042_41297242_41297304_41297616
tx.11066	chr7	+	930	6	FSM	ENSMUSG00000074165.11	ENSMUST00000100275.10	3177	6	27	2220	0	300	multi-exon	FALSE	canonical	3	5	junction_2	15.7733953225043	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGCTGTGTAGTAAATC	NA	False	NA	NA	False	NA	NA	NA	41282981	41298082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_41283119_41284103_41284135_41292756_41292857_41296906_41297042_41297242_41297304_41297616
tx.11067	chr7	-	4102	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	-29	-4	-15	4	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACTGCTGTCTTGGGA	NA	False	NA	NA	False	NA	NA	NA	42155179	42122805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
tx.11068	chr7	-	3962	6	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	98.7813747626545	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTACTTACTGCTGTC	NA	False	NA	NA	False	NA	NA	NA	42155143	42122811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42155033
tx.11069	chr7	-	3101	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-9	-961	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	78.7541886011292	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGTTATCTTT	NA	False	NA	NA	False	NA	NA	NA	42155173	42123770	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
tx.1107	chr10	+	1600	6	ISM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	2573	0	174	0	3prime_fragment	FALSE	canonical	3	179	junction_1	11.0381157812373	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	8042	False	NA	NA	False	NA	NA	NA	81159509	81162076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
tx.11070	chr7	-	3562	3	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	-12	2252	multi-exon	FALSE	canonical	3	30	junction_2	106	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTCTTATCT	NA	False	NA	NA	False	NA	NA	NA	42241983	42226954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr7_-_42230333_42232070_42232132_42241860
tx.11071	chr7	-	3672	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	-5	-2242	-5	2242	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTTCATTAATTTGTT	NA	False	NA	NA	False	NA	NA	NA	42241976	42226964	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
tx.11072	chr7	-	5001	4	FSM	ENSMUSG00000074158.10	ENSMUST00000098503.9	1976	4	-40	-2985	1	7	multi-exon	FALSE	canonical	3	68	junction_3	11.7284080571728	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATCTCTTCTGAGAATT	NA	False	NA	NA	False	NA	NA	NA	42292011	42258942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_42263648_42265396_42265458_42265656_42265784_42291903
tx.11073	chr7	-	3194	4	FSM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	-46	0	-22	0	multi-exon	FALSE	canonical	3	231	junction_3	55.1784982277215	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	42342188	42309528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_42312421_42314181_42314243_42314441_42314569_42342074
tx.11074	chr7	-	3202	4	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	164.056900698101	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGGCGTGTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	42342185	42309531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_42312421_42314181_42314243_42314441_42314583_42342074
tx.11075	chr7	-	2428	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11973	-515	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATACTAGGCAGGAACCC	NA	False	NA	NA	False	NA	NA	NA	42388414	42356185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
tx.11076	chr7	-	4089	4	FSM	ENSMUSG00000092225.2	ENSMUST00000174558.2	4073	4	-12	-4	-12	4	multi-exon	FALSE	canonical	3	126	junction_3	34.9888871246603	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGTAATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	42516670	42466248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_42470028_42471782_42471844_42472041_42472168_42516547
tx.11077	chr7	+	2941	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	-7	178	-7	-178	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCACTCTTTATA	NA	False	NA	NA	False	NA	NA	NA	42827004	42841355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
tx.11078	chr7	+	1955	5	FSM	ENSMUSG00000074887.5	ENSMUST00000205748.2	1492	5	-14	-449	-14	449	multi-exon	FALSE	canonical	3	31	junction_2	99.780697031039	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGGACACTCTTTGTAAA	9984	False	NA	NA	False	NA	NA	NA	42863448	42876715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_42863572_42870265_42870330_42872998_42873126_42873324_42873386_42875135
tx.11079	chr7	+	1883	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-5	-450	-5	450	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGACACTCTTTGTAAAT	9993	False	NA	NA	False	NA	NA	NA	42863457	42876716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
tx.1108	chr10	-	1612	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	14	-5	14	2	multi-exon	FALSE	canonical	3	490	junction_7	50.249222630803	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATATTTGTGGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	81186244	81181879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
tx.11080	chr7	+	2784	5	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_1	56.6629287982893	20	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGTATTGACATTTT	NA	False	NA	NA	False	NA	NA	NA	42903168	42915069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_+_42903292_42906867_42906982_42910109_42910237_42910431_42910493_42912710
tx.11081	chr7	-	4249	5	NIC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	30.589009464185	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	NA	False	NA	NA	NA	42962679	42945946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962527
tx.11082	chr7	+	836	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	38	19	2	0	multi-exon	FALSE	canonical	3	1745	junction_1	117.194539121923	1364	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGCCTCTTTCCTCAT	1946	False	NA	NA	False	NA	NA	NA	43093544	43107205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
tx.11083	chr7	+	3220	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	90	1184	61	-1184	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGCTGGATAGTAATA	7357	False	NA	NA	False	NA	NA	NA	43229123	43241475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
tx.11084	chr7	+	2458	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-84	-12	-28	12	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCTGCTAGTCTGAG	2808	False	NA	NA	False	NA	NA	NA	43256564	43267721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
tx.11085	chr7	+	2459	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATACCCACATTCATCCA	2834	False	NA	NA	False	NA	NA	NA	43256590	43267705	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
tx.11086	chr7	-	426	2	Antisense	novelGene_ENSMUSG00000030472.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATAGCCAGAATCTCTA	NA	False	NA	NA	False	NA	NA	NA	43296506	43294837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr7_-_43295169_43296411
tx.11087	chr7	+	2476	3	FSM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	64	junction_1	1	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTTTGGTCTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	43321438	43327722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43321500_43324527_43325071_43325850
tx.11088	chr7	+	1092	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-332	-774	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	15.8694675399019	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTACTGTGCCTCTCTCAC	NA	False	NA	NA	False	NA	NA	NA	43362490	43376184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
tx.11089	chr7	+	977	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-323	-780	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	23.4810561943027	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCCCTACTGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	43362499	43376178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370791_43370961_43373178_43373316_43375974
tx.1109	chr10	-	1442	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	23	-2	-13	2	multi-exon	FALSE	canonical	3	169	junction_9	133.860992944542	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATATTTGTGGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	81186291	81181879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
tx.11090	chr7	+	1073	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-306	-780	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.3245957266899	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCCCTACTGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	43362516	43376178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_43362686_43363202_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
tx.11091	chr7	+	1341	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	32	0	32	0	multi-exon	FALSE	canonical	2	31	junction_4	14.5134420452214	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAATGTGTGTGCCTCT	387	False	NA	NA	False	NA	NA	NA	43430490	43434834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
tx.11092	chr7	+	1504	5	ISM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	221	0	221	0	3prime_fragment	FALSE	canonical	2	31	junction_3	16.2230545829076	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAATGTGTGTGCCTCT	576	False	NA	NA	False	NA	NA	NA	43430679	43434834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
tx.11093	chr7	+	1153	4	ISM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	1682	0	1682	0	3prime_fragment	FALSE	canonical	2	31	junction_2	18.6726180988812	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAATGTGTGTGCCTCT	52	False	NA	NA	False	NA	NA	NA	43432140	43434834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_43432344_43432880_43433156_43433739_43433874_43434293
tx.11094	chr7	+	869	5	FSM	ENSMUSG00000064023.5	ENSMUST00000085461.4	1322	5	453	0	434	0	multi-exon	FALSE	canonical	3	33	junction_4	3.90512483795333	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGACTGTGCTTTGACC	3330	False	NA	NA	False	NA	NA	NA	43447453	43453246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43447557_43448047_43448208_43448488_43448752_43451503_43451638_43453037
tx.11095	chr7	+	927	5	FSM	ENSMUSG00000060177.7	ENSMUST00000077528.7	855	5	-74	2	-74	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGTTCAAGGTCTGACA	NA	False	NA	NA	False	NA	NA	NA	43762022	43766344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43762172_43764119_43764280_43765255_43765537_43765632_43765770_43766144
tx.11096	chr7	+	883	5	FSM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	71	0	-7	0	multi-exon	FALSE	canonical	3	34	junction_1	17.0934929139717	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAGTTCTGACATTCTC	NA	False	NA	NA	False	NA	NA	NA	43874854	43879042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334_43878472_43878837
tx.11097	chr7	-	1162	4	NIC	ENSMUSG00000038782.8	novel	1306	5	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	1.24721912892465	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTATCTGACTGTTT	NA	False	NA	NA	False	NA	NA	NA	43896107	43879352	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_43880066_43880749_43880897_43881779_43881981_43896006
tx.11098	chr7	+	2049	6	NNC	ENSMUSG00000045411.17	novel	1982	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	300.883100223326	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	NA	False	NA	NA	NA	43896164	43901741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_43896248_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
tx.11099	chr7	+	2242	8	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	327.388554024301	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_43896248_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.111	chr1	-	450	2	Antisense	novelGene_ENSMUSG00000041763.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCTATTCTAGTTATAA	NA	False	NA	NA	False	NA	NA	NA	43973052	43971378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr1_-_43971575_43972798
tx.1110	chr10	+	1982	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	75	1914	14	-1914	multi-exon	FALSE	canonical	3	201	junction_9	22.6077666104176	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGCCCACCAGGCCACGC	897	False	NA	NA	False	NA	NA	NA	81193399	81200145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
tx.11100	chr7	+	2092	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	279.849612391291	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.11101	chr7	+	2064	7	FSM	ENSMUSG00000045411.17	ENSMUST00000185481.7	759	7	33	-1338	0	0	multi-exon	FALSE	canonical	3	30	junction_1	300.418411922808	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43896233_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.11102	chr7	+	2063	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	349.374997515404	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_43896248_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.11103	chr7	+	1913	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	65	4	0	0	multi-exon	FALSE	canonical	3	217	junction_1	215.342889364845	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43901739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.11104	chr7	-	1598	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	72	185	-13	-12	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	740	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	44145865	44139546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
tx.11105	chr7	-	1688	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	-38	12	-16	-12	multi-exon	FALSE	canonical	3	258	junction_1	346.110162950988	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	44145868	44139546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
tx.11106	chr7	-	1203	8	ISM	ENSMUSG00000038670.12	ENSMUST00000165208.4	3611	28	17452	20	1874	-20	3prime_fragment	FALSE	canonical	2	4	junction_7	5.67845911838623	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGTGTCCATCTTTCC	NA	False	NA	NA	False	NA	NA	NA	44156628	44151142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_44151267_44153060_44153248_44154422_44154560_44154659_44154820_44154989_44155130_44155475_44155672_44156231_44156321_44156458
tx.11107	chr7	-	3425	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	26	3	17	0	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	44198245	44182172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
tx.11108	chr7	-	2255	9	FSM	ENSMUSG00000060601.14	ENSMUST00000123358.9	1853	9	-33	-369	4	0	multi-exon	TRUE	canonical	0	0	junction_8	201.405336014218	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	NA	False	NA	NA	NA	44203368	44199039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002_44203133_44203232
tx.11109	chr7	-	2096	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	241.126522804937	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	NA	False	NA	NA	NA	44203372	44199039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201768_44201930_44202045_44202120_44202179_44203002_44203133_44203232
tx.1111	chr10	-	1295	5	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	2154	-635	282	224	3prime_fragment	FALSE	canonical	3	699	junction_4	36.6563432437007	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCGGTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	81205093	81202707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907
tx.11110	chr7	-	2016	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	224.012290227209	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	NA	False	NA	NA	NA	44203387	44199039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203232
tx.11111	chr7	-	2003	10	FSM	ENSMUSG00000060601.14	ENSMUST00000073488.12	1999	10	-4	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_9	207.457626195488	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	NA	False	NA	NA	NA	44203377	44199039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
tx.11112	chr7	-	822	2	ISM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	7234	-2	7234	0	3prime_fragment	FALSE	canonical	3	83	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	850	False	NA	NA	False	NA	NA	NA	44256315	44255226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_44255788_44256054
tx.11113	chr7	-	1453	7	FSM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	-13	-2	-13	0	multi-exon	TRUE	canonical	3	22	junction_6	22.8837642591132	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	44263562	44255226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263374
tx.11114	chr7	-	1679	6	ISM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	-19	-2	-19	0	intron_retention	FALSE	canonical	3	68	junction_5	8.68562030024339	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	44263568	44255226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065
tx.11115	chr7	-	1567	7	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	26.7669987526099	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	44263568	44255226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263266
tx.11116	chr7	+	776	7	NIC	ENSMUSG00000066500.6	novel	704	7	NA	NA	-49	4	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	1.70782512765993	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACATTCCCTGTGG	139	False	NA	NA	False	NA	NA	NA	44358116	44369272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_44358399_44358479_44358555_44359678_44359766_44359934_44359956_44362421_44362503_44364751_44364876_44369166
tx.11117	chr7	-	3734	5	FSM	ENSMUSG00000048012.20	ENSMUST00000140599.9	1006	5	249	-2977	-51	-2	multi-exon	FALSE	canonical	3	48	junction_2	7.63216876123687	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCTATTTTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	44397524	44380905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397333
tx.11118	chr7	+	1769	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	200	0	-23	0	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGTTCAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	44398036	44426939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
tx.11119	chr7	-	1759	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	56	1	-28	0	multi-exon	FALSE	canonical	3	52	junction_1	35.5	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	9742	False	NA	NA	False	NA	NA	NA	44466026	44461680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44462945_44464412_44464707_44465825
tx.1112	chr10	-	2345	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	61	651	-4	225	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGGTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	81214289	81202706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
tx.11120	chr7	+	2510	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	210	2	-2	1	multi-exon	FALSE	canonical	3	986	junction_1	0	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCTGTGAGTATGGGT	285	False	NA	NA	False	NA	NA	NA	44465721	44480234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44465908_44477910
tx.11121	chr7	-	2172	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	173	6405	-7	4	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCTGGCATCAGGACAC	7876	False	NA	NA	False	NA	NA	NA	44498326	44490451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
tx.11122	chr7	+	1685	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	-99	6	-99	-2	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCGTGTTGTGTGTGA	1301	False	NA	NA	False	NA	NA	NA	44498548	44504839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
tx.11123	chr7	+	1502	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	340	-682	-38	1	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	2145	False	NA	NA	False	NA	NA	NA	44499392	44504842	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
tx.11124	chr7	+	1676	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	166	342	-15	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9501	False	NA	NA	False	NA	NA	NA	44506748	44512074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
tx.11125	chr7	+	373	4	ISM	ENSMUSG00000002963.18	ENSMUST00000208385.2	624	8	820	-58	-9	0	3prime_fragment	FALSE	canonical	3	212	junction_2	32.4448249597169	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	NA	False	NA	NA	False	NA	NA	NA	44511111	44512074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_44511183_44511617_44511706_44511789_44511852_44511922
tx.11126	chr7	-	1961	15	ISM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	6445	2	-1557	-2	3prime_fragment	FALSE	canonical	3	744	junction_9	65.4079817884075	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	NA	False	NA	NA	False	NA	NA	NA	44535691	44528809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595
tx.11127	chr7	-	2307	18	FSM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	311	1	0	-1	multi-exon	FALSE	canonical	3	744	junction_9	66.5493546850497	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCTCCCGTGACTGAC	6966	False	NA	NA	False	NA	NA	NA	44541825	44528808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
tx.11128	chr7	-	2294	18	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	175	junction_9	180.66160609536	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6981	False	NA	NA	False	NA	NA	NA	44541810	44528809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
tx.11129	chr7	+	1690	11	FSM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	8	0	1	0	multi-exon	FALSE	canonical	3	81	junction_5	12.7373466624725	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	NA	False	NA	NA	NA	44545510	44550048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
tx.1113	chr10	+	1435	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	9	0	9	0	multi-exon	FALSE	canonical	3	742	junction_3	32.2286751201473	450	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	81220270	81224186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
tx.11130	chr7	-	3342	23	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	144.442358888666	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGACTGCCCACCCTG	NA	False	NA	NA	False	NA	NA	NA	44578879	44549796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
tx.11131	chr7	-	2731	19	FSM	ENSMUSG00000007783.11	ENSMUST00000063761.8	2793	19	63	-1	-10	0	multi-exon	FALSE	canonical	3	39	junction_13	17.8819862459058	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	2727	False	NA	NA	False	NA	NA	NA	44624212	44608795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
tx.11132	chr7	-	1257	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	124	766	-12	3	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	2778	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCGCCCTGGGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	44635792	44626178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
tx.11133	chr7	-	1080	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	-5	0	-5	0	multi-exon	FALSE	canonical	3	119	junction_2	18.8473399243029	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	44647008	44640645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
tx.11134	chr7	+	1568	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	5	458	5	0	multi-exon	TRUE	canonical	3	81	junction_5	29.0601066054199	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	NA	False	NA	NA	NA	44647076	44651814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
tx.11135	chr7	+	925	6	FSM	ENSMUSG00000038387.10	ENSMUST00000044111.10	995	6	69	1	-53	-1	multi-exon	FALSE	canonical	3	253	junction_4	17.1860408471527	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGATGCTTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	44667453	44671070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
tx.11136	chr7	-	1210	4	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	-446	22163	-446	-21471	5prime_fragment	FALSE	canonical	3	13	junction_3	4.10960933531265	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGAGCCCTCGTCCC	NA	False	NA	NA	False	NA	NA	NA	44702751	44699149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_44699553_44699628_44699791_44700641_44700755_44702219
tx.11137	chr7	-	1364	7	FSM	ENSMUSG00000007837.12	ENSMUST00000007981.9	1295	7	-22	-47	2	18	multi-exon	FALSE	canonical	3	16	junction_5	9.01233722306385	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCGCGCGGTGGAACTGA	NA	False	NA	NA	False	NA	NA	NA	44711098	44702989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011
tx.11138	chr7	-	1215	6	FSM	ENSMUSG00000007837.12	ENSMUST00000209920.2	876	6	-23	-316	-22	-3	multi-exon	FALSE	canonical	3	12	junction_4	10.7962956610126	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCCCTTTCTGGGCGC	NA	False	NA	NA	False	NA	NA	NA	44711152	44703010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44710164_44710317_44711011
tx.11139	chr7	+	1712	9	FSM	ENSMUSG00000003421.14	ENSMUST00000107829.9	972	9	43	-783	-1	-11	multi-exon	FALSE	canonical	3	37	junction_6	164.802912595621	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTGGCCAAATTCTTT	3101	False	NA	NA	False	NA	NA	NA	44711895	44727623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
tx.1114	chr10	+	462	2	FSM	ENSMUSG00000085327.2	ENSMUST00000156260.2	401	2	-57	-4	-57	4	multi-exon	FALSE	canonical	3	16	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACAGCAGACATGCGGG	NA	False	NA	NA	False	NA	NA	NA	81245351	81247417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81245600_81247203
tx.11140	chr7	+	1754	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	16	44	-1	-44	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAGAGAAACAATTATAT	3101	False	NA	NA	False	NA	NA	NA	44711895	44727590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
tx.11141	chr7	-	1441	7	FSM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	7	5	0	-5	multi-exon	FALSE	canonical	3	54	junction_6	48.2482008875864	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTCTGTCTGTCTGT	6667	False	NA	NA	False	NA	NA	NA	44741638	44732341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
tx.11142	chr7	-	1381	7	NIC	ENSMUSG00000019539.12	novel	1453	7	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	63.9463751035889	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTGCTCTGTCTGTCTG	6667	False	NA	NA	False	NA	NA	NA	44741638	44732346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741583
tx.11143	chr7	-	589	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	67	5	-21	-5	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	19003	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	44773796	44771807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
tx.11144	chr7	-	658	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	25	364	0	0	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	15912	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	NA	False	NA	NA	NA	44778160	44775345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
tx.11145	chr7	-	1177	7	ISM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	8792	928	253	2	3prime_fragment	TRUE	canonical	3	395	junction_6	35.81782610191	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGGATGTGGGAACAGT	NA	False	NA	NA	False	NA	NA	NA	44795205	44791256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108
tx.11146	chr7	-	2595	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	12	930	5	0	multi-exon	FALSE	canonical	3	349	junction_15	41.3256881370413	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9345	False	NA	NA	False	NA	NA	NA	44803985	44791258	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
tx.11147	chr7	+	1066	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	11	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	50.5151242478703	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	NA	False	NA	NA	NA	44803737	44809489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
tx.11148	chr7	+	1186	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	0	-1	0	0	multi-exon	FALSE	canonical	3	114	junction_1	85.8518678298646	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	NA	False	NA	NA	NA	44803737	44809489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
tx.11149	chr7	-	2034	20	NNC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	382	5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	15.2344557716802	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGATTTCCTCATCAC	9460	False	NA	NA	False	NA	NA	NA	44853934	44833042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373_44839452_44842599_44842651_44842882_44843001_44843383_44843546_44843773_44843841_44844952_44845018_44845391_44845579_44845930_44846036_44849668_44849810_44853866
tx.1115	chr10	-	2883	14	FSM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	29	206	-21	2	multi-exon	TRUE	canonical	3	251	junction_4	53.9264236863306	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCAGGTGTCCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	81332197	81322288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
tx.11150	chr7	+	2093	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	39	8	1	1	multi-exon	FALSE	canonical	3	157	junction_1	60.1724793633042	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5469	False	NA	NA	False	NA	NA	NA	44865215	44883060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
tx.11151	chr7	+	2054	11	FSM	ENSMUSG00000030796.18	ENSMUST00000107801.10	3396	11	1359	-17	0	1	multi-exon	FALSE	canonical	3	317	junction_7	23.9883304963059	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	6888	False	NA	NA	False	NA	NA	NA	44866634	44883060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
tx.11152	chr7	-	1214	8	FSM	ENSMUSG00000030798.16	ENSMUST00000098461.10	1227	8	13	0	-12	0	multi-exon	FALSE	canonical	3	49	junction_1	15.6426940630769	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTGGTAAAAA	4432	False	NA	NA	False	NA	NA	NA	44888251	44883055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
tx.11153	chr7	-	762	5	FSM	ENSMUSG00000038260.11	ENSMUST00000210311.2	498	5	-33	-231	0	4	multi-exon	FALSE	canonical	2	4	junction_4	72.5857251806442	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTCCTGTGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	44954799	44952769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954696
tx.11154	chr7	+	2433	6	FSM	ENSMUSG00000038239.12	ENSMUST00000085351.7	2411	6	-21	-1	-21	1	multi-exon	FALSE	canonical	1	1	junction_2	2.87054001888146	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCCGAGTGGGGTG	NA	False	NA	NA	False	NA	NA	NA	44984692	44988399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44986799_44986884_44986956_44987310_44987380_44987577_44987633_44988112_44988150_44988304
tx.11155	chr7	-	1201	3	ISM	ENSMUSG00000003863.19	ENSMUST00000211098.2	1467	4	349	-1	-49	0	3prime_fragment	FALSE	canonical	3	52	junction_1	0.5	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	7335	False	NA	NA	False	NA	NA	NA	44990235	44988549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_44989442_44989612_44989685_44989998
tx.11156	chr7	-	1569	5	ISM	ENSMUSG00000003863.19	ENSMUST00000211067.2	4565	30	25282	0	-272	0	3prime_fragment	FALSE	canonical	3	52	junction_1	6.04152298679729	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	6714	False	NA	NA	False	NA	NA	NA	44990856	44988549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492
tx.11157	chr7	-	1432	7	NNC	ENSMUSG00000003863.19	novel	3899	26	NA	NA	-1069	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_6	15.0711276581711	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGGTGACCAGCCT	5917	False	NA	NA	False	NA	NA	NA	44991653	44988698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991551
tx.11158	chr7	-	1696	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	33	6	0	0	multi-exon	FALSE	canonical	3	1192	junction_9	143.840189098875	405	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCATGTGATGTCTTAC	9074	False	NA	NA	False	NA	NA	NA	45045133	45025882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
tx.11159	chr7	+	1468	3	FSM	ENSMUSG00000074121.4	ENSMUST00000058879.8	1963	3	-28	523	-28	-523	multi-exon	FALSE	canonical	3	16	junction_1	4	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTTGTGGTATGTAC	609	False	NA	NA	False	NA	NA	NA	45063090	45066080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45063213_45064154_45064279_45064858
tx.1116	chr10	-	2895	14	FSM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	-56	2	10	-2	multi-exon	FALSE	canonical	3	153	junction_4	76.7224306246012	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTCCAGGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	81332216	81322292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
tx.11160	chr7	-	1509	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	327	-2	-19	1	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	629	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	9509	False	NA	NA	False	NA	NA	NA	45083720	45071319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
tx.11161	chr7	+	3700	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	-22	0	-22	0	multi-exon	FALSE	canonical	3	89	junction_1	61.1041369757855	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	1005	False	NA	NA	False	NA	NA	NA	45084245	45106043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
tx.11162	chr7	+	900	3	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	-24	18151	-24	-13359	5prime_fragment	TRUE	canonical	3	89	junction_1	16.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGTGTCAACCTCAGT	1003	False	NA	NA	False	NA	NA	NA	45084243	45087892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45084595_45085955_45086138_45087525
tx.11163	chr7	+	3027	2	NIC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	-16	-12552	intron_retention	FALSE	canonical	3	122	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTCATTAACC	1044	False	NA	NA	False	NA	NA	NA	45084284	45088699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_45086138_45087525
tx.11164	chr7	+	2236	7	NIC	ENSMUSG00000003865.17	novel	480	5	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	83.740505266103	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	NA	False	NA	NA	False	NA	NA	NA	45097002	45106043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_45097078_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
tx.11165	chr7	+	2203	6	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	13028	-16	141	16	3prime_fragment	FALSE	canonical	3	219	junction_3	11.2605506082074	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGGTGTGGTGGGT	NA	False	NA	NA	False	NA	NA	NA	45097295	45106059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
tx.11166	chr7	-	923	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	45	0	0	0	multi-exon	TRUE	canonical	3	56898	junction_1	7359.57672393974	6102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	NA	False	NA	NA	NA	45109263	45107367	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
tx.11167	chr7	-	420	3	ISM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	1660	5	806	-5	3prime_fragment	FALSE	canonical	3	3046	junction_1	94.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9715	False	NA	NA	False	NA	NA	NA	45114662	45111125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_45111391_45112822_45112928_45114612
tx.11168	chr7	-	1247	5	FSM	ENSMUSG00000003873.12	ENSMUST00000210392.2	1100	5	18	-165	18	-5	multi-exon	FALSE	canonical	3	3046	junction_1	70.515955641259	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	10000	False	NA	NA	False	NA	NA	NA	45116237	45111125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643
tx.11169	chr7	-	801	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	61	5	-1	-5	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	1029	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9976	False	NA	NA	False	NA	NA	NA	45116261	45111125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
tx.1117	chr10	-	1039	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	0	7	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAGGGAACTGAGGAAG	6420	False	NA	NA	False	NA	NA	NA	81344007	81338146	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81338940_81343761
tx.11170	chr7	-	1363	4	ISM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	15333	2418	3765	232	3prime_fragment	FALSE	canonical	3	497	junction_1	19.3045763140937	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGCTCAGTTGGCATA	9764	False	NA	NA	False	NA	NA	NA	45144497	45142299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476
tx.11171	chr7	-	1341	3	ISM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	15616	2421	4048	229	3prime_fragment	FALSE	canonical	3	497	junction_1	23.5	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTGTGGCTCAGTTGGC	9967	False	NA	NA	False	NA	NA	NA	45144214	45142302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_45143374_45143540_45143638_45144041
tx.11172	chr7	-	2424	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	0	2429	0	221	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTAAGGGTCTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	45159830	45142310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
tx.11173	chr7	+	1388	8	ISM	ENSMUSG00000023467.19	ENSMUST00000107758.10	1597	10	30103	0	659	0	3prime_fragment	FALSE	canonical	3	17	junction_3	22.8339167709362	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCTGTGCGTTTGGA	1943	False	NA	NA	False	NA	NA	NA	45165890	45171806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45166111_45167203_45167392_45168009_45168331_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
tx.11174	chr7	+	802	5	ISM	ENSMUSG00000023467.19	ENSMUST00000085331.14	1525	10	4986	0	3780	0	3prime_fragment	FALSE	canonical	3	69	junction_2	4.38748219369606	52	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCTGTGCGTTTGGA	5064	False	NA	NA	False	NA	NA	NA	45169011	45171806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
tx.11175	chr7	-	1617	2	FSM	ENSMUSG00000040435.13	ENSMUST00000167273.2	2809	2	1197	-5	-1180	0	multi-exon	FALSE	canonical	3	424	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	5180	False	NA	NA	False	NA	NA	NA	45174373	45172340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45172747_45173162
tx.11176	chr7	-	2289	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	44	0	44	0	multi-exon	FALSE	canonical	3	356	junction_2	34	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	3905	False	NA	NA	False	NA	NA	NA	45175648	45172340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45172747_45173162_45174816_45175418
tx.11177	chr7	+	679	3	ISM	ENSMUSG00000040428.20	ENSMUST00000211797.2	2655	18	19872	0	-24	0	3prime_fragment	FALSE	canonical	3	13	junction_1	3.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	45199288	45203653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45199390_45202992_45203106_45203188
tx.11178	chr7	+	553	2	FSM	ENSMUSG00000040428.20	ENSMUST00000211348.2	476	2	-11	-66	-11	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	45199301	45203653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45199390_45203188
tx.11179	chr7	+	1364	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	29	7	-15	-4	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	NA	False	NA	NA	NA	45204345	45216738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
tx.1118	chr10	-	1234	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	323	1857	323	-294	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGATACAT	4546	False	NA	NA	False	NA	NA	NA	81380701	81366414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
tx.11180	chr7	+	1221	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3146	4	-16	-4	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	NA	False	NA	NA	NA	45208613	45216738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
tx.11181	chr7	+	1575	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	196	1	-1	0	multi-exon	TRUE	canonical	3	349	junction_4	47.8895604490164	230	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTATCATGCTCTAA	2451	False	NA	NA	False	NA	NA	NA	45219772	45239134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
tx.11182	chr7	-	958	3	FSM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	0	-7	0	7	multi-exon	FALSE	canonical	2	3	junction_1	4.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATATGTTTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	45264914	45263302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45263735_45264289_45264394_45264492
tx.11183	chr7	+	1637	8	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	5046	-1	5046	1	3prime_fragment	FALSE	canonical	3	61	junction_1	11.5245965886278	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGTCAAGATTTGGGG	4412	False	NA	NA	False	NA	NA	NA	45281957	45288518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
tx.11184	chr7	-	3192	2	FSM	ENSMUSG00000110357.2	ENSMUST00000211533.2	1542	2	2	-1652	2	1652	multi-exon	FALSE	canonical	3	16	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTGTGTAGCCCTGG	NA	False	NA	NA	False	NA	NA	NA	45288187	45283451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45286563_45288106
tx.11185	chr7	+	994	4	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	8829	1	8829	-1	3prime_fragment	FALSE	canonical	3	66	junction_3	14.2361043360417	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTTGTCAAGATTTGG	3253	False	NA	NA	False	NA	NA	NA	45285740	45288516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45286006_45286143_45286317_45287293_45287442_45288108
tx.11186	chr7	+	652	3	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	9309	1	9309	-1	3prime_fragment	FALSE	canonical	3	66	junction_2	2	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTTGTCAAGATTTGG	3733	False	NA	NA	False	NA	NA	NA	45286220	45288516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45286317_45287293_45287442_45288108
tx.11187	chr7	+	1237	7	ISM	ENSMUSG00000003273.15	ENSMUST00000003360.10	1585	9	1157	0	-16	0	3prime_fragment	FALSE	canonical	3	16	junction_2	3.86221007541882	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACTTCTTTCTGCCTTA	NA	False	NA	NA	False	NA	NA	NA	45350423	45354106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45350791_45351857_45352044_45352256_45352353_45352485_45352559_45352882_45353038_45353136_45353303_45353912
tx.11188	chr7	+	1405	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	-210	-39	-29	39	multi-exon	FALSE	canonical	3	23	junction_1	20	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGCTGTTGTGGCGGA	NA	False	NA	NA	False	NA	NA	NA	45354482	45359577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45355187_45357683_45357896_45359088
tx.11189	chr7	-	2838	8	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	-36	4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	50.0611870512435	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCCCTTTCAGTTATTG	3226	False	NA	NA	False	NA	NA	NA	45367362	45359686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366682_45366833_45367124
tx.1119	chr10	+	1308	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	103	0	103	0	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	160	False	NA	NA	False	NA	NA	NA	81395430	81402196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
tx.11190	chr7	-	2683	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	71	794	-29	6	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTTTCAGTTATTGTG	3233	False	NA	NA	False	NA	NA	NA	45367355	45359684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
tx.11191	chr7	-	2985	6	FSM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	0	-17	0	-1	multi-exon	FALSE	canonical	3	46	junction_5	32.4678302324008	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	5957	False	NA	NA	False	NA	NA	NA	45364631	45359691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020
tx.11192	chr7	+	644	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	31	4	3	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	12804	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5953	False	NA	NA	False	NA	NA	NA	45367525	45370255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
tx.11193	chr7	-	1556	12	FSM	ENSMUSG00000003269.18	ENSMUST00000107729.10	2519	12	20	943	-4	29	multi-exon	FALSE	canonical	3	144	junction_4	92.1110540651432	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTCATTTCTTGGGT	3182	False	NA	NA	False	NA	NA	NA	45463715	45457003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
tx.11194	chr7	-	723	6	ISM	ENSMUSG00000003269.18	ENSMUST00000211783.2	1983	11	3266	-97	276	25	3prime_fragment	FALSE	canonical	3	144	junction_4	129.55246041662	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATGCCCTCATTTCTT	6861	False	NA	NA	False	NA	NA	NA	45460036	45457007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45459663_45459994
tx.11195	chr7	-	564	4	ISM	ENSMUSG00000003269.18	ENSMUST00000211783.2	1983	11	5426	-89	2436	17	3prime_fragment	FALSE	canonical	3	463	junction_2	13.5973853695808	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGCCTGCAGATGCCCT	9021	False	NA	NA	False	NA	NA	NA	45457876	45457015	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796
tx.11196	chr7	-	1904	7	FSM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	-9	3	-3	0	multi-exon	FALSE	canonical	3	447	junction_1	34.207292919623	249	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAAGTCCTCTGAGCTT	8625	False	NA	NA	False	NA	NA	NA	45480222	45474653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
tx.11197	chr7	+	1541	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	52	6	-1	-3	multi-exon	TRUE	canonical	3	208	junction_1	16.5378354085412	438	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTTGCTGTTCCCTG	3996	False	NA	NA	False	NA	NA	NA	45522247	45533150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
tx.11198	chr7	-	964	5	FSM	ENSMUSG00000040231.17	ENSMUST00000039049.16	967	5	4	-1	4	1	multi-exon	FALSE	canonical	3	25	junction_2	22.466641938661	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTGTCTGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	45546134	45536267	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45536550_45536790_45536931_45538035_45538274_45545114_45545316_45546031
tx.11199	chr7	-	803	4	FSM	ENSMUSG00000040231.17	ENSMUST00000120299.4	722	4	-20	-61	9	0	multi-exon	FALSE	canonical	3	35	junction_1	18.0616229121921	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCCTGTCTGTTCCTC	NA	False	NA	NA	False	NA	NA	NA	45546114	45536268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45536550_45538035_45538274_45545114_45545316_45546031
tx.112	chr1	+	4632	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	-1	0	0	0	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3311	False	NA	NA	False	NA	NA	NA	43973173	44042160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
tx.1120	chr10	+	1211	6	FSM	ENSMUSG00000054452.11	ENSMUST00000219870.2	1410	6	202	-3	28	2	multi-exon	FALSE	canonical	3	2772	junction_5	277.977984739799	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCCCTGCTTCTGT	824	False	NA	NA	False	NA	NA	NA	81397079	81402198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
tx.11200	chr7	+	2178	8	FSM	ENSMUSG00000002781.20	ENSMUST00000069772.16	2297	8	126	-7	-11	7	multi-exon	FALSE	canonical	3	12	junction_1	17.4414472344658	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGTGGCTGCAGGTCAA	5618	False	NA	NA	False	NA	NA	NA	45546490	45566844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
tx.11201	chr7	+	2109	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	365	-8	43	4	multi-exon	FALSE	canonical	3	48	junction_2	6.94422221866655	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAGTGTGGCTGCAGGT	6017	False	NA	NA	False	NA	NA	NA	45546889	45566841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
tx.11202	chr7	-	343	2	ISM	ENSMUSG00000040212.13	ENSMUST00000210937.2	380	3	669	-156	669	1	3prime_fragment	FALSE	canonical	3	61	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGACTCGGCTCCTCTTC	6311	False	NA	NA	False	NA	NA	NA	45568875	45567450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_45567660_45568741
tx.11203	chr7	+	1218	7	ISM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	38840	4	-10107	-4	3prime_fragment	FALSE	canonical	3	300	junction_1	20.2271819314725	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATAGTGTGGGGTGC	721	False	NA	NA	False	NA	NA	NA	45721961	45733632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
tx.11204	chr7	-	1441	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	7	17	4	0	multi-exon	FALSE	canonical	3	75	junction_10	7.18609768928867	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTCCCTGGAGAACCC	NA	False	NA	NA	False	NA	NA	NA	46289224	46092594	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
tx.11205	chr7	-	1514	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	18	3196	-1	0	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	390	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCATCGGGATGATGGT	NA	False	NA	NA	False	NA	NA	NA	46360086	46338727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
tx.11206	chr7	+	2735	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	1	0	1	0	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4707	False	NA	NA	False	NA	NA	NA	46445527	46473224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
tx.11207	chr7	+	1898	14	ISM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	12	4434	1	-3543	5prime_fragment	FALSE	canonical	3	472	junction_5	48.9200531237767	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATCTGTAGCTGGCCTT	4718	False	NA	NA	False	NA	NA	NA	46445538	46468790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545
tx.11208	chr7	+	1586	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	2	0	0	0	multi-exon	FALSE	canonical	3	6684	junction_1	674.726490316405	5104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	46495264	46505051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
tx.11209	chr7	+	1190	8	FSM	ENSMUSG00000030851.16	ENSMUST00000014545.11	1370	8	36	144	36	-102	multi-exon	FALSE	canonical	1	3	junction_1	3.73619909446343	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAAGGCTAGAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	46510662	46527422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_46510726_46511186_46511320_46515832_46515951_46519022_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
tx.1121	chr10	-	549	4	FSM	ENSMUSG00000034758.13	ENSMUST00000129282.8	469	4	-79	-1	24	0	multi-exon	FALSE	canonical	3	65	junction_1	8.25967446224258	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	2926	False	NA	NA	False	NA	NA	NA	81428628	81426737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546
tx.11210	chr7	-	1517	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	9	423	9	214	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	570	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCTTGGACTTGA	NA	False	NA	NA	False	NA	NA	NA	46569708	46539119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
tx.11211	chr7	-	1402	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	1	212	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	371.517940679738	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	NA	False	NA	NA	NA	46569716	46539121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_46539453_46540669_46540789_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
tx.11212	chr7	-	1446	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	1	212	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	331.9070969227	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	NA	False	NA	NA	NA	46569716	46539121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46560559_46563125_46563211_46569568
tx.11213	chr7	-	1366	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	1	214	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	409.120460280842	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCTTGGACTTGA	NA	False	NA	NA	False	NA	NA	NA	46569716	46539119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
tx.11214	chr7	-	2029	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	42	2545	-13	-2222	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACTGAGATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	46608233	46575508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
tx.11215	chr7	+	331	2	FSM	ENSMUSG00000109118.2	ENSMUST00000208046.2	334	2	3	0	3	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTATACCTGAGTCTGG	NA	False	NA	NA	False	NA	NA	NA	46658295	46658756	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_46658342_46658471
tx.11216	chr7	+	1796	3	FSM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	35	0	35	0	multi-exon	FALSE	canonical	3	21	junction_1	1	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCCTGACTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	46700383	46704525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_46700550_46702597_46702863_46703160
tx.11217	chr7	+	2381	17	FSM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	29	0	0	0	multi-exon	TRUE	canonical	3	240	junction_5	25.4348893009189	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	False	NA	NA	False	NA	NA	NA	48438779	48477188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
tx.11218	chr7	+	1240	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	-10	20	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	90.6598036618214	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGTTCTAGTT	9870	False	NA	NA	False	NA	NA	NA	49408852	49423743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_49408894_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
tx.11219	chr7	+	1299	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	-10	23	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	93.7861397009174	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGTTCTAGTTGCT	9870	False	NA	NA	False	NA	NA	NA	49408852	49423746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_49408894_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
tx.1122	chr10	-	1789	11	NIC	ENSMUSG00000034758.13	novel	1855	11	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_10	15.7445228571716	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	NA	False	NA	NA	NA	81433194	81426737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433129
tx.11220	chr7	+	1379	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	-21	-20	3	20	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGTTCTAGTT	9897	False	NA	NA	False	NA	NA	NA	49408879	49423743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
tx.11221	chr7	+	1635	5	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	10	21	intron_retention	FALSE	canonical	3	230	junction_1	21.9928965804871	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTGTTCTAGTTG	9928	False	NA	NA	False	NA	NA	NA	49408910	49423744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
tx.11222	chr7	+	1411	6	FSM	ENSMUSG00000039745.9	ENSMUST00000085272.7	1418	6	27	-20	3	20	multi-exon	TRUE	canonical	3	12	junction_1	99.2685247195706	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGTTCTAGTT	9921	False	NA	NA	False	NA	NA	NA	49408903	49423743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_49409060_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
tx.11223	chr7	+	2397	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	99	11	6	-11	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGCATCACACTGAAT	NA	False	NA	NA	False	NA	NA	NA	49428192	49508002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
tx.11224	chr7	+	2284	15	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	291	11	93	-11	3prime_fragment	FALSE	canonical	3	505	junction_7	46.9900662537372	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGCATCACACTGAAT	NA	False	NA	NA	False	NA	NA	NA	49428384	49508002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
tx.11225	chr7	+	2808	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-57	16	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	15.4008928312614	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTATTAACACTCTTT	960	False	NA	NA	False	NA	NA	NA	51512117	51644739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_51512394_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
tx.11226	chr7	-	2561	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	163	329	-7	-329	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTGACTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	51655603	51647247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
tx.11227	chr7	-	526	2	Genic_Genomic	ENSMUSG00000099647.2	novel	321	1	NA	NA	-46	275	multi-exon	FALSE	canonical	3	158	junction_1	0	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGCTACTTCAAAGC	NA	False	NA	NA	False	NA	NA	NA	54062272	54061630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr7_-_54062012_54062127
tx.11228	chr7	-	569	2	Genic_Genomic	ENSMUSG00000099647.2	novel	321	1	NA	NA	-46	265	multi-exon	FALSE	canonical	3	74	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTTCAGTGCT	NA	False	NA	NA	False	NA	NA	NA	54062272	54061640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr7_-_54062012_54062074
tx.11229	chr7	+	4384	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	150	1906	15	198	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCGTTTGTTCATT	NA	False	NA	NA	False	NA	NA	NA	55491968	55580444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
tx.1123	chr10	-	2005	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	11	-1	11	0	multi-exon	FALSE	canonical	3	36	junction_10	15.2183321404185	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	NA	False	NA	NA	NA	81436723	81426737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
tx.11230	chr7	+	1187	4	ISM	ENSMUSG00000030447.16	ENSMUST00000173267.8	5111	15	28036	-202	-3774	202	3prime_fragment	FALSE	canonical	3	563	junction_3	60.301096360035	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	NA	False	NA	NA	NA	55574857	55580448	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_55574955_55576035_55576275_55577934_55578083_55579745
tx.11231	chr7	-	3174	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	24	-1	-2	1	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	55612200	55581033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
tx.11232	chr7	-	2998	7	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	69.789564644962	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	55612220	55581033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55612143
tx.11233	chr7	-	3055	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	-15	-1	-4	1	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	55612202	55581033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
tx.11234	chr7	-	2876	6	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	84.7924524943111	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGGGGTTTCCCAGCC	NA	False	NA	NA	False	NA	NA	NA	55612221	55581035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55612143
tx.11235	chr7	+	2853	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	287	1771	-139	12	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTTAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	58878785	58954704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
tx.11236	chr7	-	1327	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	-14	619	-14	-612	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	1300	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	59654873	59632861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
tx.11237	chr7	+	717	2	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTCATCAACATAAAGA	NA	False	NA	NA	False	NA	NA	NA	59805933	59813717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_+_59806578_59813644
tx.11238	chr7	-	348	3	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	9	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGGACTGAATCCT	NA	False	NA	NA	False	NA	NA	NA	63452692	63419339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_63419421_63420547_63420656_63452533
tx.11239	chr7	-	491	2	NNC	ENSMUSG00000052040.11	novel	6396	2	NA	NA	1217	40	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATTGCACAAATACAG	NA	False	NA	NA	False	NA	NA	NA	63587446	63541090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_63541546_63587410
tx.1124	chr10	-	1672	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	219	0	-12	0	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9877	False	NA	NA	False	NA	NA	NA	81463412	81457620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
tx.11240	chr7	+	1919	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	74	-1	-4	1	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	304	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGAGTTTTCAGACT	NA	False	NA	NA	False	NA	NA	NA	63835202	63861176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
tx.11241	chr7	-	2168	11	FSM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	31	49	-1	-49	multi-exon	FALSE	canonical	3	635	junction_4	61.7421250039226	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTGTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	64041985	64026323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
tx.11242	chr7	-	775	2	FSM	ENSMUSG00000030521.12	ENSMUST00000205516.2	2276	2	1	1500	1	-1500	multi-exon	FALSE	canonical	3	724	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCGAGGGAGGGCTGT	NA	False	NA	NA	False	NA	NA	NA	64041983	64039234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_64039880_64041853
tx.11243	chr7	+	574	3	FSM	ENSMUSG00000033429.11	ENSMUST00000206194.2	532	3	-44	2	-9	-2	multi-exon	FALSE	canonical	3	108	junction_2	103	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTATTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	64042478	64061867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_64042592_64049916_64050093_64061582
tx.11244	chr7	+	397	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206882.2	391	2	-8	2	-8	-2	multi-exon	FALSE	canonical	3	49	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTATTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	64042479	64061867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_64042592_64061582
tx.11245	chr7	+	727	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	95	6	0	-2	multi-exon	FALSE	canonical	3	203	junction_2	55.5	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTATTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	64042487	64061867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_64042592_64049916_64050255_64061582
tx.11246	chr7	+	566	2	Antisense	novelGene_ENSMUSG00000030518.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTCCATTTGATTGGC	NA	False	NA	NA	False	NA	NA	NA	64714660	64715877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr7_+_64714858_64715508
tx.11247	chr7	+	2792	17	ISM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	2586	8	2586	-8	3prime_fragment	FALSE	canonical	3	56	junction_7	7.84991042942529	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGAGCCTCGGTATGT	NA	False	NA	NA	False	NA	NA	NA	65297231	65341831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
tx.11248	chr7	+	866	5	FSM	ENSMUSG00000078681.11	ENSMUST00000032726.14	908	5	48	-6	9	-3	multi-exon	FALSE	canonical	3	473	junction_3	21.6333076527839	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCAGAACTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	65343203	65351656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65351340
tx.11249	chr7	+	955	6	FSM	ENSMUSG00000078681.11	ENSMUST00000107495.5	1003	6	42	6	-8	-4	multi-exon	FALSE	canonical	3	37	junction_2	226.65709783724	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCCAGAACTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	65343206	65351655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_65343318_65343598_65343692_65344890_65345076_65347443_65347619_65348839_65348916_65351340
tx.1125	chr10	+	797	4	ISM	ENSMUSG00000054708.18	ENSMUST00000154707.8	4635	18	10100	-3	0	0	3prime_fragment	FALSE	canonical	3	46	junction_1	24.7521042876493	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	81479636	81483444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_81479728_81482138_81482268_81482626_81482693_81482933
tx.11250	chr7	+	1037	2	ISM	ENSMUSG00000078681.11	ENSMUST00000206517.2	905	6	4973	-9	4926	0	3prime_fragment	FALSE	canonical	3	497	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAACTTTTTATTTGCC	NA	False	NA	NA	False	NA	NA	NA	65348197	65351659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_65348916_65351340
tx.11251	chr7	-	1750	3	NNC	ENSMUSG00000093405.2	novel	380	2	NA	NA	-21	1751	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	15	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATATATATTGAATTAT	NA	False	NA	NA	False	NA	NA	NA	65511761	65509002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_65510336_65510737_65510986_65511592
tx.11252	chr7	-	2147	2	FSM	ENSMUSG00000093405.2	ENSMUST00000176744.2	380	2	-25	-1742	-25	1742	multi-exon	FALSE	canonical	3	34	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTATATATCATATATA	NA	False	NA	NA	False	NA	NA	NA	65511765	65509011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_65510986_65511592
tx.11253	chr7	+	1044	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	201	3	-5	-3	multi-exon	FALSE	canonical	3	2395	junction_6	274.913622798144	1738	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGTGCTGTGTATCT	NA	False	NA	NA	False	NA	NA	NA	65710286	65724332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
tx.11254	chr7	+	1173	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	18	0	-10	0	multi-exon	FALSE	canonical	3	410	junction_5	18.3804243694209	389	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	65729414	65739153	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
tx.11255	chr7	-	3403	13	FSM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	40	0	40	0	multi-exon	FALSE	canonical	3	10	junction_1	4.11214326382511	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTTTTTCATTGGAG	NA	False	NA	NA	False	NA	NA	NA	66077225	66040637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_66042510_66048435_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
tx.11256	chr7	-	1500	7	ISM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	40	17621	40	0	5prime_fragment	FALSE	canonical	3	14	junction_3	2.80871659105879	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTCTGGCCTACAACC	NA	False	NA	NA	False	NA	NA	NA	66077225	66058258	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
tx.11257	chr7	+	1431	3	ISM	ENSMUSG00000053091.17	ENSMUST00000128486.8	1419	5	-29	667	20	-667	intron_retention	FALSE	canonical	3	70	junction_2	8	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATAGTTTTTTATTACA	NA	False	NA	NA	False	NA	NA	NA	66339667	66358983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_66339772_66345923_66346055_66357787
tx.11258	chr7	+	1262	2	FSM	ENSMUSG00000053091.17	ENSMUST00000153007.2	453	2	69	-878	0	-667	multi-exon	FALSE	canonical	2	7	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATAGTTTTTTATTACA	NA	False	NA	NA	False	NA	NA	NA	66339705	66358983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_66339772_66357787
tx.11259	chr7	+	566	3	FSM	ENSMUSG00000043831.13	ENSMUST00000208698.2	551	3	-15	0	3	0	multi-exon	FALSE	canonical	3	17	junction_2	14	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTGGTTTATCTAAA	NA	False	NA	NA	False	NA	NA	NA	66872346	66874375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_66872378_66873356_66873640_66874123
tx.1126	chr10	+	948	5	FSM	ENSMUSG00000054708.18	ENSMUST00000132458.2	829	5	17	-136	17	0	multi-exon	FALSE	canonical	3	22	junction_1	34.9070193514141	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	81479653	81483444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
tx.11260	chr7	+	2917	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	-12	-7	0	0	multi-exon	FALSE	canonical	3	45	junction_1	19.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	66872343	66878211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_66872378_66873356_66873640_66875611
tx.11261	chr7	-	1479	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	-17	1461	-17	-465	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTCTTCTGTGTTTT	555	False	NA	NA	False	NA	NA	NA	67294996	67164618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
tx.11262	chr7	-	1387	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	14	-468	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGTTGTCTTCTGTGT	549	False	NA	NA	False	NA	NA	NA	67295002	67164621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
tx.11263	chr7	+	2209	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	8	-1	8	1	multi-exon	FALSE	canonical	3	46	junction_1	12.2429571591181	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTGTGTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	67297180	67376325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
tx.11264	chr7	+	1370	2	NNC	ENSMUSG00000074071.12	novel	454	5	NA	NA	-39	4951	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCAACAATGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	67925703	67934691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_67925790_67933407
tx.11265	chr7	+	2830	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	-40	25	-40	-20	multi-exon	FALSE	canonical	3	103	junction_5	20.4328167417025	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCACATGTTAATAGCTT	NA	False	NA	NA	False	NA	NA	NA	67925702	68012815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
tx.11266	chr7	+	539	5	NNC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-7	-28165	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	58.8451357377991	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTCATGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	67925735	67975229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67975061
tx.11267	chr7	+	2754	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-36	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	51.6048565978997	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTAATTTTAGGACTTT	NA	False	NA	NA	False	NA	NA	NA	67925706	68012829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
tx.11268	chr7	+	2550	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-11	-7	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	52.588813766174	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTAATTTTAGGACTT	NA	False	NA	NA	False	NA	NA	NA	67925731	68012828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67999981_68000165_68003356_68003492_68007932_68008037_68010989
tx.11269	chr7	-	1085	5	FSM	ENSMUSG00000042659.16	ENSMUST00000118110.3	1129	5	-37	81	16	-81	multi-exon	FALSE	canonical	3	754	junction_4	68.2289344779764	183	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGATTGCAAATGTGATCT	NA	False	NA	NA	False	NA	NA	NA	68398973	68391339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
tx.1127	chr10	+	2152	4	FSM	ENSMUSG00000096856.8	ENSMUST00000189672.7	4735	4	-3	2586	-3	544	multi-exon	FALSE	canonical	2	7	junction_1	17.4610678049451	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACTGCCATCTATTT	NA	False	NA	NA	False	NA	NA	NA	81484889	81500609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81485001_81497831_81497959_81498158_81498220_81498756
tx.11270	chr7	+	3354	3	FSM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	54	-5	0	5	multi-exon	FALSE	canonical	3	36	junction_1	5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTTCTGATTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	75498111	75523884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_75498222_75515084_75516890_75522445
tx.11271	chr7	-	984	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	45	105	45	-105	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	584	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATTTGTCCTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	78432792	78425088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
tx.11272	chr7	+	839	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	217	0	-19	0	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	78433083	78442737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
tx.11273	chr7	-	2227	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	43	-1	43	-1	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTCTCTTCCTTGAT	NA	False	NA	NA	False	NA	NA	NA	78496968	78477220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
tx.11274	chr7	+	2111	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	18	2827	-6	1	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	78545692	78558130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
tx.11275	chr7	+	1995	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	13	-1	-4	1	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	78545694	78558130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
tx.11276	chr7	+	2046	3	ISM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	6216	-4	-136	1	3prime_fragment	FALSE	canonical	3	660	junction_1	4	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	78551972	78558130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_78552579_78555590_78555792_78556891
tx.11277	chr7	-	1581	5	FSM	ENSMUSG00000030606.9	ENSMUST00000206092.2	3358	5	-140	1917	-140	1	multi-exon	FALSE	canonical	2	5	junction_4	1.87082869338697	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAATTCTCCTGGCATC	2135	False	NA	NA	False	NA	NA	NA	78780906	78766766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_78767242_78767596_78767900_78771394_78771764_78773117_78773300_78780654
tx.11278	chr7	-	2114	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	12	-1	5	0	multi-exon	TRUE	canonical	3	296	junction_6	379.595691346581	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	NA	False	NA	NA	NA	78798796	78783515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
tx.11279	chr7	-	2003	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	5	0	5	0	multi-exon	FALSE	canonical	3	790	junction_6	144.155948541848	585	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	NA	False	NA	NA	NA	78798796	78783515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
tx.1128	chr10	+	2147	4	Antisense	novelGene_ENSMUSG00000112001.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	11.8133634311129	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCTGTAAGTTGTCATC	NA	False	NA	NA	False	NA	NA	NA	81523208	81534922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_81523350_81532207_81532335_81532534_81532596_81533104
tx.11280	chr7	-	337	3	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCCCATAAGTTT	NA	False	NA	NA	False	NA	NA	NA	78869720	78859840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_78859909_78869317_78869418_78869551
tx.11281	chr7	-	1857	9	FSM	ENSMUSG00000039194.17	ENSMUST00000179243.3	2142	9	285	0	149	0	multi-exon	FALSE	canonical	3	11	junction_8	4.45638586749397	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTTTCATGATGAACTT	NA	False	NA	NA	False	NA	NA	NA	79036511	79024617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
tx.11282	chr7	-	746	3	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_2	2	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTGTCCTGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	79048153	79046094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr7_-_79046493_79047383_79047471_79047892
tx.11283	chr7	-	1289	5	ISM	ENSMUSG00000039176.18	ENSMUST00000149444.8	4247	23	13980	-181	-120	0	3prime_fragment	FALSE	canonical	3	269	junction_4	57.974132162543	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	NA	False	NA	NA	NA	79101948	79099129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854
tx.11284	chr7	+	2011	7	NIC	ENSMUSG00000046591.11	novel	3655	20	NA	NA	1	9	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	91.3699744020005	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGGCAAATTTCCATAT	1951	False	NA	NA	False	NA	NA	NA	79309970	79325470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79325257
tx.11285	chr7	-	2213	3	FSM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	28	0	28	0	multi-exon	TRUE	canonical	3	20	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTCTGTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	79392800	79385704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_79387659_79389912_79390029_79392657
tx.11286	chr7	-	941	2	ISM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	38099	4432	38046	2754	3prime_fragment	FALSE	canonical	3	250	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCAGTGCTGTGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	79532298	79529504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_79530361_79532213
tx.11287	chr7	-	1374	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	7	4432	7	2754	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCAGTGCTGTGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	79570390	79529504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
tx.11288	chr7	-	1717	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	54	506	54	-506	multi-exon	FALSE	canonical	3	36	junction_1	5.76194411635517	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTGCTCCATGCTTGCT	9947	False	NA	NA	False	NA	NA	NA	79585053	79575614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
tx.11289	chr7	+	2265	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-10	4979	10	5	5prime_fragment	TRUE	canonical	3	198	junction_1	67.6214955961983	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTGAGTGCTGTGTAAC	NA	False	NA	NA	False	NA	NA	NA	79674571	79736599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
tx.1129	chr10	+	2412	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	-31	3	-31	-3	multi-exon	FALSE	canonical	3	15	junction_1	8.5764535535124	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTATACTGCCATCC	NA	False	NA	NA	False	NA	NA	NA	81540627	81557807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
tx.11290	chr7	-	1696	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	49	0	-11	0	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	856	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	79765091	79744593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
tx.11291	chr7	-	853	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	185	9	-4	3	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	449	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTATGATGGTAGC	2236	False	NA	NA	False	NA	NA	NA	79882376	79876903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
tx.11292	chr7	+	1919	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	22	2248	22	-2248	multi-exon	FALSE	canonical	3	81	junction_1	0	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	79882634	79889561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_79882954_79887961
tx.11293	chr7	+	1715	2	FSM	ENSMUSG00000047084.9	ENSMUST00000138005.2	1709	2	-5	-1	0	1	multi-exon	FALSE	canonical	3	448	junction_1	0	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGCTTGGTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	79910962	79915123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_79911680_79914125
tx.11294	chr7	+	1317	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	1	-1	1	1	multi-exon	FALSE	canonical	3	448	junction_2	14	373	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGCTTGGTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	79910963	79915123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_79911172_79911568_79911680_79914125
tx.11295	chr7	+	2577	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	-7	4	-7	2	multi-exon	FALSE	canonical	3	97	junction_6	14.9188576657057	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	79919389	79941323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
tx.11296	chr7	+	2983	15	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_13	288.475240333922	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	NA	False	NA	NA	NA	79944205	79966007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
tx.11297	chr7	+	3015	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	6	5	5	0	multi-exon	FALSE	canonical	3	144	junction_13	239.092317096712	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACACTGTTTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	79944203	79966002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
tx.11298	chr7	+	2931	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	-11	-8	3	0	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	NA	False	NA	NA	NA	79944215	79966007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
tx.11299	chr7	+	3050	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-37	-5	3	0	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	NA	False	NA	NA	NA	79944215	79966007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
tx.113	chr1	-	1192	7	FSM	ENSMUSG00000026049.12	ENSMUST00000133677.8	935	7	-10	-247	0	0	multi-exon	FALSE	canonical	3	15	junction_5	163.292596960861	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	NA	False	NA	NA	NA	44141593	44125772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139096_44141059_44141118_44141487
tx.1130	chr10	+	1839	4	NNC	ENSMUSG00000094076.8	novel	4725	4	NA	NA	-10	31425	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	6.68331255192114	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTAATCAATGTGATA	4183	False	NA	NA	False	NA	NA	NA	81648009	81693749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_81648118_81656960_81657088_81691636_81691698_81692206
tx.11300	chr7	-	917	3	ISM	ENSMUSG00000030533.17	ENSMUST00000238999.2	3180	20	13688	-4	13083	0	3prime_fragment	FALSE	canonical	3	89	junction_1	7	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	NA	NA	NA	79976231	79975039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_79975626_79975760_79975917_79976056
tx.11301	chr7	-	1234	7	ISM	ENSMUSG00000030533.17	ENSMUST00000238999.2	3180	20	11402	-4	10797	0	3prime_fragment	TRUE	canonical	3	75	junction_3	10.9607886983049	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	NA	NA	NA	79978517	79975039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440
tx.11302	chr7	+	886	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	12	612	0	0	multi-exon	FALSE	canonical	3	96	junction_1	13.490737563232	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTTCTTCCTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	79992863	79995850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
tx.11303	chr7	-	951	5	ISM	ENSMUSG00000053158.11	ENSMUST00000206728.2	2707	18	7374	-16	391	-1	3prime_fragment	FALSE	canonical	2	10	junction_1	2.77263412660235	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTGACATGTGTGCTCC	NA	False	NA	NA	False	NA	NA	NA	80029793	80027504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565
tx.11304	chr7	-	2570	16	ISM	ENSMUSG00000030528.13	ENSMUST00000170315.3	4770	22	32659	-1	12353	1	3prime_fragment	FALSE	canonical	3	335	junction_6	43.2257125126032	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGGCCATTGTTTC	NA	False	NA	NA	False	NA	NA	NA	80152087	80104838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030
tx.11305	chr7	-	4512	22	FSM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	-12	98	-12	1	multi-exon	FALSE	canonical	3	335	junction_6	41.4509518092853	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGGCCATTGTTTC	NA	False	NA	NA	False	NA	NA	NA	80184879	80104838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
tx.11306	chr7	-	1653	5	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	79554	1193	6386	-1193	3prime_fragment	FALSE	canonical	3	682	junction_1	38.7104637016918	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTTTATTCAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	80373610	80362523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526
tx.11307	chr7	-	2918	24	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	125	24797	-10	4698	5prime_fragment	FALSE	canonical	3	539	junction_23	37.1883775571187	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACAGCTGTCCGACA	NA	False	NA	NA	False	NA	NA	NA	80453039	80386127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
tx.11308	chr7	-	2480	11	FSM	ENSMUSG00000030536.11	ENSMUST00000205824.2	2307	11	5	-178	-4	178	multi-exon	FALSE	canonical	3	539	junction_10	45.6487677818361	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAATAAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	80453024	80404690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
tx.11309	chr7	-	2556	7	FSM	ENSMUSG00000025722.17	ENSMUST00000139990.8	2549	7	-6	-1	-4	0	multi-exon	FALSE	canonical	3	120	junction_4	7.94599829404014	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	NA	False	NA	NA	NA	80550986	80540470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
tx.1131	chr10	-	2761	4	NNC	ENSMUSG00000096718.3	novel	4067	4	NA	NA	-46	-1277	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	2.35702260395516	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATACTGCCATCCATTT	4800	False	NA	NA	False	NA	NA	NA	81766360	81739021	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_81741500_81742039_81742101_81742300_81742428_81766265
tx.11310	chr7	-	2350	8	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	45.3332332932069	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	NA	False	NA	NA	NA	80550964	80540470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550643
tx.11311	chr7	-	1554	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	31	529	-4	9	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAATTTACTTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	80550986	80540999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
tx.11312	chr7	-	682	3	FSM	ENSMUSG00000025723.13	ENSMUST00000026817.11	705	3	17	6	1	0	multi-exon	FALSE	canonical	2	13	junction_1	1.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAATGTCTGGGCCTCT	NA	False	NA	NA	False	NA	NA	NA	80554807	80551981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_80552252_80553881_80554055_80554568
tx.11313	chr7	-	1127	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	218	0	-17	0	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	724	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	1603	False	NA	NA	False	NA	NA	NA	80597310	80565124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
tx.11314	chr7	+	1981	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27008	0	27008	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	NA	False	NA	NA	NA	80791605	80820164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
tx.11315	chr7	-	474	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	20	0	0	0	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	8492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	80994982	80992480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
tx.11316	chr7	-	1297	8	ISM	ENSMUSG00000062444.16	ENSMUST00000147624.2	1459	9	488	2	488	-2	3prime_fragment	FALSE	canonical	3	57	junction_7	13.4255315708237	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	81114555	81110148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378
tx.11317	chr7	-	1076	5	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	-5	-3389	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	25.7524270700841	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTTTGTTTGTTTT	7854	False	NA	NA	False	NA	NA	NA	81143459	81132782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_81133408_81134173_81134270_81134583_81134659_81134781_81134858_81143255
tx.11318	chr7	+	741	4	FSM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	-8	-8	0	4	multi-exon	FALSE	canonical	3	35	junction_1	29.9777695412228	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGTATTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	81173310	81181250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_81173425_81178534_81178689_81179094_81179276_81180958
tx.11319	chr7	-	1829	7	ISM	ENSMUSG00000038663.8	ENSMUST00000042318.6	3985	13	17891	1049	17891	-1049	3prime_fragment	TRUE	canonical	1	1	junction_1	2.40947204913349	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGCCAGCCAGCCCCCA	NA	False	NA	NA	False	NA	NA	NA	81198801	81184104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_81184997_81186878_81187056_81190059_81190193_81191787_81191922_81194707_81194859_81195604_81195740_81198594
tx.1132	chr10	+	1870	4	Antisense	novelGene_ENSMUSG00000112051.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	11.0855260988773	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATGTAATCAATGTGA	2294	False	NA	NA	False	NA	NA	NA	81814467	81826862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_81814609_81824424_81824552_81824751_81824813_81825321
tx.11320	chr7	+	1406	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	46	0	46	0	multi-exon	FALSE	canonical	3	441	junction_1	195	548	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAGTTTTGACAGCCC	NA	False	NA	NA	False	NA	NA	NA	81412718	81419239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_81412805_81417274_81417472_81418116
tx.11321	chr7	-	762	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	0	1899	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	126.089254102005	49	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGCCTACAACAAAATG	NA	False	NA	NA	False	NA	NA	NA	81439213	81430030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439102
tx.11322	chr7	-	977	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGCAGTTTCGAGTGC	NA	False	NA	NA	False	NA	NA	NA	81439213	81431929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
tx.11323	chr7	-	874	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGCAGTTTCGAGTGC	NA	False	NA	NA	False	NA	NA	NA	81439213	81431929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
tx.11324	chr7	+	1870	10	NNC	ENSMUSG00000038623.10	novel	750	4	NA	NA	34	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.34209919681348	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTTTATTAATTTTGAA	NA	False	NA	NA	False	NA	NA	NA	81512468	81533818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_81512654_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
tx.11325	chr7	-	1265	2	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	20	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTATCTGCATTAATCATA	NA	False	NA	NA	False	NA	NA	NA	81814542	81761686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_81762785_81814375
tx.11326	chr7	+	1546	9	FSM	ENSMUSG00000030638.14	ENSMUST00000032874.14	1647	9	101	0	41	0	multi-exon	FALSE	canonical	3	252	junction_3	40.04040927613	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	NA	False	NA	NA	NA	81824644	81956627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
tx.11327	chr7	+	1751	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	37455	-5	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	107.755437797821	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGACTGGTTATTTTCA	3016	False	NA	NA	False	NA	NA	NA	81862436	81956622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_81862770_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
tx.11328	chr7	+	1091	5	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.1139542868376	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGGCCTGTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	82297814	82308234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82307474
tx.11329	chr7	+	2496	15	ISM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	-24	79166	3	2	5prime_fragment	FALSE	canonical	3	73	junction_1	23.371555186524	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTACTGGTTTGCCTGAA	NA	False	NA	NA	False	NA	NA	NA	82297824	82347894	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086
tx.1133	chr10	+	2331	4	Genic_Genomic	ENSMUSG00000112790.2	novel	2758	1	NA	NA	-17467	-2659	multi-exon	FALSE	canonical	3	45	junction_1	10.7806410858642	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTATACTGCCATCC	NA	False	NA	NA	False	NA	NA	NA	81832839	81850405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr10_+_81832952_81847436_81847564_81847762_81847824_81848374
tx.11330	chr7	+	780	3	ISM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	114528	13	92940	-13	3prime_fragment	FALSE	canonical	3	118	junction_1	9	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAACTTCCAAACCGT	NA	False	NA	NA	False	NA	NA	NA	82412376	82427047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_82412623_82421664_82421850_82426698
tx.11331	chr7	+	1236	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	40	1207	-1	-1207	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATCTCTTCCATCAGAA	NA	False	NA	NA	False	NA	NA	NA	83281206	83290329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
tx.11332	chr7	+	1886	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	255	2351	-75	1101	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	1290	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATAGGTATATTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	83541462	83548389	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_83541684_83544737_83544971_83546957
tx.11333	chr7	-	1939	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	299	0	76	0	multi-exon	FALSE	canonical	3	1379	junction_1	80.5	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGGGCTTATGTGCTCC	NA	False	NA	NA	False	NA	NA	NA	83800802	83758563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_83760010_83763458_83763639_83800489
tx.11334	chr7	-	1472	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	107	6	69	-6	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATCTCTGTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	84255043	84234372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
tx.11335	chr7	-	1584	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	92	1279	18	9	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	84339073	84264252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
tx.11336	chr7	-	1583	7	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	16	9	combination_of_known_junctions	FALSE	canonical	3	150	junction_5	197.190615620746	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	84339075	84264252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84338953
tx.11337	chr7	+	1887	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	30	576	-19	-576	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTCTTTCTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	87927322	87959520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
tx.11338	chr7	+	1441	3	FSM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	23	113	23	-113	multi-exon	FALSE	canonical	3	30	junction_1	4.5	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTTTCTGATATTACC	NA	False	NA	NA	False	NA	NA	NA	88079503	88140667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_88079812_88099688_88099970_88139815
tx.11339	chr7	-	3207	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	0	493	0	-493	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTACCTGGACCTCATTT	NA	False	NA	NA	False	NA	NA	NA	88987995	88789414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
tx.1134	chr10	+	2375	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	-10	-5	-10	0	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATCTATATTATCAAA	NA	False	NA	NA	False	NA	NA	NA	81883946	81897420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
tx.11340	chr7	-	815	6	NNC	ENSMUSG00000039428.12	novel	659	3	NA	NA	-5	-58575	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.3337575745304	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTTGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	88987904	88866760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_88867006_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
tx.11341	chr7	-	799	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	23	-16	-11	0	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	NA	False	NA	NA	NA	89590384	89567895	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
tx.11342	chr7	-	1050	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	15	1159	10	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	547	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	NA	False	NA	NA	NA	89590397	89567895	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
tx.11343	chr7	-	1634	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	131	-262	-12	-15	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	623	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGTAATGTTTACTT	NA	False	NA	NA	False	NA	NA	NA	89629779	89603882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
tx.11344	chr7	-	1521	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-4	-31	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTTGTACCATATCTT	NA	False	NA	NA	False	NA	NA	NA	89629771	89603898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
tx.11345	chr7	-	357	2	FSM	ENSMUSG00000097162.3	ENSMUST00000209166.2	271	2	-77	-9	-33	0	multi-exon	FALSE	canonical	3	49	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTATCTAAAATGTCTGA	NA	False	NA	NA	False	NA	NA	NA	89779225	89774029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_89774241_89779079
tx.11346	chr7	+	570	3	NNC	ENSMUSG00000039361.12	novel	700	4	NA	NA	-16	-13789	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGATGGGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	89779686	89799465	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_89779911_89798243_89798437_89799312
tx.11347	chr7	+	3221	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	266	2	-16	0	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTACGGTGTTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	89779686	89858138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
tx.11348	chr7	-	768	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	26	5	5	-5	multi-exon	FALSE	canonical	3	739	junction_4	32.5297940356222	313	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGTCTGCAACATTAAAA	1671	False	NA	NA	False	NA	NA	NA	90106411	90099912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
tx.11349	chr7	-	868	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	6	1385	0	1100	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTCTTTCTTTCTTCA	6026	False	NA	NA	False	NA	NA	NA	90125203	90118030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
tx.1135	chr10	+	753	5	NNC	ENSMUSG00000112160.2	novel	2726	4	NA	NA	-35	11708	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	9.08295106229247	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGTTTCCTTGCCTTC	NA	False	NA	NA	False	NA	NA	NA	81919151	81958758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572_81944605_81958320
tx.11350	chr7	+	1252	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	344	0	344	0	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	235	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	92210700	92231502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
tx.11351	chr7	-	2704	9	ISM	ENSMUSG00000041328.17	ENSMUST00000151177.2	4731	13	5388	-549	5388	-168	3prime_fragment	FALSE	canonical	3	164	junction_7	31.850971335267	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGTATTTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	92307357	92292918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515
tx.11352	chr7	+	1516	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	49	7891	-15	0	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGAGTCAGCAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	92390859	92485852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
tx.11353	chr7	+	1469	5	NIC	ENSMUSG00000030643.15	novel	9456	5	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	9.01041064547005	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGAGTCAGCAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	92390890	92485852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_92391051_92469190_92469292_92473021_92473090_92478733_92478918_92484896
tx.11354	chr7	-	3368	6	FSM	ENSMUSG00000030641.11	ENSMUST00000032877.11	3387	6	19	0	4	0	multi-exon	FALSE	canonical	3	123	junction_4	35.6168499449348	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	NA	False	NA	NA	NA	92523436	92506732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
tx.11355	chr7	-	3457	7	FSM	ENSMUSG00000030641.11	ENSMUST00000208356.2	840	7	7	-2624	2	0	multi-exon	FALSE	canonical	3	86	junction_4	58.4648517392193	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	NA	False	NA	NA	NA	92523438	92506732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92521969_92522053_92523348
tx.11356	chr7	+	2281	9	NNC	ENSMUSG00000061119.8	novel	2967	9	NA	NA	78	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	36.7219280539571	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTTATTGAAAAAGTAGA	NA	False	NA	NA	False	NA	NA	NA	92523755	92583219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_92523891_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
tx.11357	chr7	+	2353	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	45	569	2	0	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTGAAAAAGTAGAATG	NA	False	NA	NA	False	NA	NA	NA	92524504	92583222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
tx.11358	chr7	-	643	2	NNC	ENSMUSG00000087412.5	novel	849	2	NA	NA	-24	21	at_least_one_novel_splicesite	FALSE	canonical	3	464	junction_1	0	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTACTGGCCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	92828876	92828168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_92828742_92828806
tx.11359	chr7	+	2479	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	37	1262	-20	524	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAGTTATTTTTAAA	7379	False	NA	NA	False	NA	NA	NA	96600748	96712703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
tx.1136	chr10	+	4033	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	-35	-1272	-35	1272	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGAGAAACAGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	81919151	81948322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
tx.11360	chr7	+	2971	2	FSM	ENSMUSG00000044952.6	ENSMUST00000054107.6	2966	2	-5	0	-5	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGTCTGCTTCCA	NA	False	NA	NA	False	NA	NA	NA	96981528	96999420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_96981579_96996499
tx.11361	chr7	+	2005	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	8	26	8	-26	multi-exon	TRUE	canonical	3	93	junction_8	19.8289560996034	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAAAGTGTTTTGGGTCC	NA	False	NA	NA	False	NA	NA	NA	97020820	97041366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
tx.11362	chr7	+	604	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	74	5	-26	-5	multi-exon	FALSE	canonical	3	2164	junction_2	233	1309	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGTTCCTTTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	97049283	97057004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_97049565_97056072_97056217_97056825
tx.11363	chr7	+	3189	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	55	-4	-2	3	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	988	False	NA	NA	False	NA	NA	NA	97130217	97190605	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
tx.11364	chr7	-	873	5	FSM	ENSMUSG00000035642.17	ENSMUST00000154853.8	883	5	10	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	23.5902522241709	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGTTGAGAGCATTAG	NA	False	NA	NA	False	NA	NA	NA	97228693	97199546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97228572
tx.11365	chr7	-	769	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	11	9	0	0	multi-exon	FALSE	canonical	3	37	junction_3	30.4740326617051	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGTTGAGAGCATTAG	NA	False	NA	NA	False	NA	NA	NA	97228693	97199546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
tx.11366	chr7	+	3033	11	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	82088	6164	-567	6	3prime_fragment	FALSE	canonical	3	124	junction_7	10.590561835899	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGTTTCTGTTATAGCA	NA	False	NA	NA	False	NA	NA	NA	97311191	97335821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
tx.11367	chr7	-	1115	3	NNC	ENSMUSG00000086993.2	novel	3091	2	NA	NA	-15	12185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTATGATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	97345843	97330444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_97331143_97345318_97345675_97345782
tx.11368	chr7	+	1477	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	27	0	27	0	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	1084	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	97345867	97368086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
tx.11369	chr7	-	1129	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	237	2371	-114	2	multi-exon	FALSE	canonical	3	30	junction_1	4.5	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTAGTAACTGTGATGA	NA	False	NA	NA	False	NA	NA	NA	97387259	97375583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_97375912_97378177_97378295_97386575
tx.1137	chr10	+	523	5	NNC	ENSMUSG00000078435.6	novel	2634	4	NA	NA	3	-1087	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.53553390593274	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGGTAAATCCTTTC	NA	False	NA	NA	False	NA	NA	NA	81963849	81986758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_81963933_81974086_81974214_81979420_81979454_81986050_81986112_81986539
tx.11370	chr7	+	2106	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	271	417	271	184	multi-exon	TRUE	canonical	3	118	junction_1	35.6279671159656	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATCTCAGCCATCCCAT	NA	False	NA	NA	False	NA	NA	NA	97438018	97560673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
tx.11371	chr7	+	1935	15	NIC	ENSMUSG00000030774.14	novel	3065	15	NA	NA	3	-25	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	60.5657426576565	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTCTTCTCCTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	97492144	97560464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_97492349_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
tx.11372	chr7	+	2147	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	3	915	3	184	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATCTCAGCCATCCCAT	NA	False	NA	NA	False	NA	NA	NA	97492144	97560673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
tx.11373	chr7	+	823	6	ISM	ENSMUSG00000030774.14	ENSMUST00000207017.2	952	7	4608	32	4608	-32	3prime_fragment	FALSE	canonical	3	198	junction_5	13.979985693841	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCATGTCCTCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	97547729	97560457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
tx.11374	chr7	-	2568	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	59	1871	59	231	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCTCCTCAATGCCGT	NA	False	NA	NA	False	NA	NA	NA	97827422	97772636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
tx.11375	chr7	-	1422	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	0	9918	0	136	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCTCCTTGCTATCTGC	NA	False	NA	NA	False	NA	NA	NA	97958745	97865513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
tx.11376	chr7	-	1545	2	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGCCCATGAGTGACT	NA	False	NA	NA	False	NA	NA	NA	98521632	98518489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_98519811_98521408
tx.11377	chr7	-	2263	8	FSM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	97	junction_4	10.965623464226	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGTTGCTTAATGC	NA	False	NA	NA	False	NA	NA	NA	98831927	98802864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98818904_98819034_98831598
tx.11378	chr7	-	1252	3	ISM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	15451	0	15426	0	3prime_fragment	FALSE	canonical	3	113	junction_1	1.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	98872375	98868290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_98869167_98871459_98871660_98872199
tx.11379	chr7	-	1780	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	4.4	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	98887826	98868290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
tx.1138	chr10	-	2134	4	FSM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	-1	-9	-1	5	multi-exon	FALSE	canonical	2	18	junction_1	59.275252471462	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTCATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	82077115	82060678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_82062428_82063278_82063426_82063632_82063760_82077004
tx.11380	chr7	-	2103	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	73	39	-52	-33	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	NA	False	NA	NA	NA	99002373	98994634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
tx.11381	chr7	-	835	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	87	986	0	0	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	23013	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGACTGGATTGTGTCC	8422	False	NA	NA	False	NA	NA	NA	99132858	99128088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
tx.11382	chr7	-	1495	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	80	1334	2	0	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	1593	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAGTCTTGAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	99508104	99488109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
tx.11383	chr7	-	3006	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	63	0	-36	0	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	99770709	99731317	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
tx.11384	chr7	+	1572	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	21	2395	4	323	multi-exon	TRUE	canonical	3	366	junction_1	56.4938140012529	642	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	NA	False	NA	NA	NA	100142564	100148832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
tx.11385	chr7	-	984	7	ISM	ENSMUSG00000030708.15	ENSMUST00000130534.8	1159	8	1591	-10	-27	10	3prime_fragment	FALSE	canonical	3	16	junction_5	19.1020650425259	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTGAGTTGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	100161015	100152217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100156582_100156741_100159901_100160064_100160956
tx.11386	chr7	-	843	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	2969	-68	-46	8	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGAAGTGAGTTGGAGG	NA	False	NA	NA	False	NA	NA	NA	100161034	100152219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
tx.11387	chr7	-	649	3	ISM	ENSMUSG00000030708.15	ENSMUST00000054923.9	847	7	7000	-65	7000	7	3prime_fragment	FALSE	canonical	3	56	junction_2	3	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGGAAGTGAGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	100153988	100152220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_100152518_100153122_100153200_100153713
tx.11388	chr7	+	857	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	-23	557	6	33	multi-exon	FALSE	canonical	3	255	junction_1	0	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGTGCCTCTATCTTTC	7548	False	NA	NA	False	NA	NA	NA	100186283	100189019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_100186400_100188278
tx.11389	chr7	-	921	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	-2	3366	-2	120	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	353	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTTTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	100232311	100198323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
tx.1139	chr10	-	2067	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	-32	0	-25	0	multi-exon	FALSE	canonical	3	32	junction_1	52.6898683071254	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATGTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	82077139	82060683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
tx.11390	chr7	-	1807	7	FSM	ENSMUSG00000030701.18	ENSMUST00000107044.10	1806	7	0	-1	0	0	multi-exon	FALSE	canonical	3	13	junction_3	4.3365372770859	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGGCTTTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	100307663	100293105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100307499
tx.11391	chr7	+	1204	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-112	2985	-27	0	multi-exon	TRUE	canonical	3	35	junction_2	3.48173074484398	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCCTCCCCTCGTGCC	NA	False	NA	NA	False	NA	NA	NA	100355814	100485404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
tx.11392	chr7	-	2140	17	FSM	ENSMUSG00000047767.18	ENSMUST00000122116.8	2083	17	-56	-1	-39	1	multi-exon	FALSE	canonical	3	10	junction_10	7.54750579661917	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCCTCTTTGAAGCAT	8338	False	NA	NA	False	NA	NA	NA	100951334	100938822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
tx.11393	chr7	+	2968	21	FSM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	31	694	31	-2	multi-exon	FALSE	canonical	3	23	junction_1	25.1838738084513	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	NA	False	NA	NA	NA	101043605	101061099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
tx.11394	chr7	+	2155	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	118	2354	-6	4	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTTGCCCTCATGCCT	NA	False	NA	NA	False	NA	NA	NA	101312957	101437021	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
tx.11395	chr7	-	1223	6	ISM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	1353	14	-6	-14	3prime_fragment	FALSE	canonical	3	40	junction_5	113.141327550988	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTATGAATTATTTGGG	2913	False	NA	NA	False	NA	NA	NA	101518537	101507551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517759_101518363
tx.11396	chr7	-	1213	5	ISM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	1968	14	-48	-14	3prime_fragment	FALSE	canonical	3	257	junction_4	35.4788669492136	63	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTATGAATTATTTGGG	3528	False	NA	NA	False	NA	NA	NA	101517922	101507551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604
tx.11397	chr7	+	991	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-47	-7	-27	1	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	7790	False	NA	NA	False	NA	NA	NA	101545587	101548752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
tx.11398	chr7	+	822	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-23	2304	-14	1	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	232	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	7803	False	NA	NA	False	NA	NA	NA	101545600	101548752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
tx.11399	chr7	+	736	5	FSM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	-21	-65	-13	1	multi-exon	FALSE	canonical	3	48	junction_1	224.489420686143	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	7804	False	NA	NA	False	NA	NA	NA	101545601	101548752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106_101548245_101548400
tx.114	chr1	-	1258	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	NA	False	NA	NA	NA	44141593	44125772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
tx.1140	chr10	-	2250	5	NNC	ENSMUSG00000062931.16	novel	2035	4	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	54.3438128953058	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATGTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	82077142	82060683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_82062428_82063364_82063426_82063632_82063760_82072440_82072621_82077004
tx.11400	chr7	+	1121	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	189	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	7025	False	NA	NA	False	NA	NA	NA	101555108	101561110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
tx.11401	chr7	+	215	2	ISM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-14	2176	-14	-2176	5prime_fragment	FALSE	canonical	3	923	junction_1	0	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGCCCAACTACCATAGC	7013	False	NA	NA	False	NA	NA	NA	101555096	101558934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_101555248_101558870
tx.11402	chr7	-	823	5	FSM	ENSMUSG00000064307.14	ENSMUST00000106966.8	821	5	-2	0	-2	0	multi-exon	FALSE	canonical	2	4	junction_1	3.93700393700591	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAAGTCCCCTGTACCTT	2523	False	NA	NA	False	NA	NA	NA	101583077	101562196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_101562420_101562641_101562791_101564768_101564975_101569843_101569982_101582970
tx.11403	chr7	-	2239	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	4	6	4	-6	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCATTTGCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	101714361	101668349	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
tx.11404	chr7	-	2359	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	-12	-3	-12	3	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACACGCATTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	101714688	101668355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
tx.11405	chr7	+	3226	11	FSM	ENSMUSG00000099481.7_ENSMUSG00000100254.2	ENSMUST00000094130.4	2298	11	-249	-679	-2	-2	multi-exon	FALSE	canonical	3	50	junction_1	17.4482090771517	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGTGTTGCCGATCTG	NA	False	NA	NA	False	NA	NA	NA	101714715	101732967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
tx.11406	chr7	+	2098	11	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	2	77	combination_of_known_junctions	FALSE	canonical	2	17	junction_2	28.6462912084619	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGACCTTCTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	101714719	101731875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
tx.11407	chr7	+	954	3	ISM	ENSMUSG00000030996.9	ENSMUST00000033300.4	1425	5	5235	5	5235	-5	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTTTTGCAATGATCT	NA	False	NA	NA	False	NA	NA	NA	101756184	101760358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_101756640_101757933_101757976_101759901
tx.11408	chr7	-	1106	3	ISM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	70496	-4	43941	4	3prime_fragment	FALSE	canonical	3	149	junction_1	2	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	NA	False	NA	NA	False	NA	NA	NA	101788831	101783405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_101784201_101787938_101788093_101788674
tx.11409	chr7	-	1407	5	ISM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	62811	-4	36256	4	3prime_fragment	FALSE	canonical	3	149	junction_1	8.37779804005802	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	NA	False	NA	NA	False	NA	NA	NA	101796516	101783405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406
tx.1141	chr10	-	406	3	ISM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	-13	2582	-13	-2582	5prime_fragment	FALSE	canonical	3	139	junction_1	4.5	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTGAGGAGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	82077127	82063269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_82063426_82063632_82063760_82077004
tx.11410	chr7	+	2080	6	NIC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-15	-3	intron_retention	FALSE	canonical	2	2	junction_1	65.7309668269074	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	NA	False	NA	NA	False	NA	NA	NA	101859526	101887771	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_101859799_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
tx.11411	chr7	+	2022	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	9	3	-8	-3	multi-exon	FALSE	canonical	3	53	junction_5	43.1689188601655	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	603	False	NA	NA	False	NA	NA	NA	101872243	101887771	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
tx.11412	chr7	+	1914	6	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	55.9692772867401	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	611	False	NA	NA	False	NA	NA	NA	101872251	101887771	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
tx.11413	chr7	+	1912	6	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	63.6948977548438	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	601	False	NA	NA	False	NA	NA	NA	101872241	101887771	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
tx.11414	chr7	+	2026	7	FSM	ENSMUSG00000030990.19	ENSMUST00000033292.14	1201	7	-24	-801	0	-3	multi-exon	FALSE	canonical	3	107	junction_5	27.0657635317306	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	611	False	NA	NA	False	NA	NA	NA	101872251	101887771	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
tx.11415	chr7	-	1259	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	10	0	10	0	multi-exon	FALSE	canonical	3	11	junction_1	0	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCTCCCTATGTG	6370	False	NA	NA	False	NA	NA	NA	101899320	101888329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_101889520_101899251
tx.11416	chr7	+	3040	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	113	844	-75	245	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTACTAAACTTGTC	NA	False	NA	NA	False	NA	NA	NA	102091014	102118134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
tx.11417	chr7	+	881	3	ISM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	24060	844	2033	245	3prime_fragment	FALSE	canonical	3	945	junction_2	69	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTACTAAACTTGTC	7814	False	NA	NA	False	NA	NA	NA	102114961	102118134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_102115021_102116084_102116274_102117501
tx.11418	chr7	-	2778	8	FSM	ENSMUSG00000030966.14	ENSMUST00000033264.12	2793	8	14	1	14	0	multi-exon	FALSE	canonical	3	11	junction_3	2.61861468283191	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTCTTTCATTCTAC	NA	False	NA	NA	False	NA	NA	NA	102214679	102207128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_102208871_102209174_102209276_102209799_102209823_102210994_102211226_102212472_102212569_102212900_102213333_102213478_102213548_102214595
tx.11419	chr7	+	3533	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	0	-248	intron_retention	TRUE	canonical	0	0	junction_8	239.859203492382	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	NA	False	NA	NA	NA	103868001	103884111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
tx.1142	chr10	+	3400	4	FSM	ENSMUSG00000073427.5	ENSMUST00000210381.2	3330	4	-63	-7	-2	7	multi-exon	FALSE	canonical	3	117	junction_3	14.0554457615387	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATGTTGTCATCCATT	NA	False	NA	NA	False	NA	NA	NA	82190086	82215477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82212394
tx.11420	chr7	+	3585	8	FSM	ENSMUSG00000072244.12	ENSMUST00000098180.10	3827	8	-5	247	-3	-247	multi-exon	FALSE	canonical	2	421	junction_3	109.572825470701	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	NA	False	NA	NA	NA	103867996	103884112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
tx.11421	chr7	+	3609	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-53	-245	intron_retention	FALSE	canonical	0	0	junction_8	276.31221018985	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTTCTTACTCTGTA	NA	False	NA	NA	False	NA	NA	NA	103868582	103884114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
tx.11422	chr7	+	2504	5	FSM	ENSMUSG00000030898.16	ENSMUST00000033189.6	2573	5	69	0	-17	0	multi-exon	FALSE	canonical	3	14	junction_2	1.6583123951777	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGGCTCAGATTATTCG	NA	False	NA	NA	False	NA	NA	NA	105075006	105085546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_105075383_105082789_105083042_105083201_105083452_105083726_105083903_105084096
tx.11423	chr7	+	1769	3	ISM	ENSMUSG00000030898.16	ENSMUST00000033189.6	2573	5	8371	0	8285	0	3prime_fragment	FALSE	canonical	3	16	junction_2	1	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGGCTCAGATTATTCG	NA	False	NA	NA	False	NA	NA	NA	105083308	105085546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_105083452_105083726_105083903_105084096
tx.11424	chr7	+	2381	6	FSM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	29	2	29	-2	multi-exon	FALSE	canonical	3	35	junction_2	5.53534100123922	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTTCCTATTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	105203595	105207594	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_105204045_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
tx.11425	chr7	-	2645	14	FSM	ENSMUSG00000037032.17	ENSMUST00000189378.7	2878	14	252	-19	39	0	multi-exon	FALSE	canonical	3	117	junction_6	14.1718113410527	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	NA	False	NA	NA	NA	105230446	105207690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
tx.11426	chr7	-	1807	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	51	1417	-14	1	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGAGGTCAATTTGT	NA	False	NA	NA	False	NA	NA	NA	105289572	105284826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
tx.11427	chr7	+	747	2	FSM	ENSMUSG00000089847.9	ENSMUST00000151193.2	1083	2	-95	431	21	6	multi-exon	FALSE	canonical	3	351	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTATGGGTACCAGCC	NA	False	NA	NA	False	NA	NA	NA	105289675	105290561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_105289830_105289968
tx.11428	chr7	+	574	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	416	2283	24	6	multi-exon	FALSE	canonical	3	351	junction_1	22.5	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTATGGGTACCAGCC	NA	False	NA	NA	False	NA	NA	NA	105289678	105290561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_105289830_105289968_105290065_105290234
tx.11429	chr7	+	671	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	26	-3	26	3	multi-exon	FALSE	canonical	3	108	junction_3	126.499011853848	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCTTTCTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	105289680	105291053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
tx.1143	chr10	+	2360	4	NIC	ENSMUSG00000073427.5	novel	1531	7	NA	NA	-2	1950	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	64.8194072447099	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGACAAGTATCCCAATT	NA	False	NA	NA	False	NA	NA	NA	82190086	82238630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_82190216_82204404_82204532_82204731_82204793_82236587
tx.11430	chr7	-	2089	6	ISM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	1730	475	-988	199	3prime_fragment	FALSE	canonical	3	246	junction_4	14.1053181460044	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTGATCTCACTGT	NA	False	NA	NA	False	NA	NA	NA	105384258	105381411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896
tx.11431	chr7	-	2302	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	274	477	-134	197	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCGTTGATCTCACT	9853	False	NA	NA	False	NA	NA	NA	105385714	105381413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
tx.11432	chr7	+	1718	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	76	1	-3	-1	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGTGTGGGGACAGAGG	NA	False	NA	NA	False	NA	NA	NA	105385874	105392131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
tx.11433	chr7	+	1670	12	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	375	-2	-1	-1	3prime_fragment	FALSE	canonical	3	270	junction_7	30.9136360294609	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGTGTGGGGACAGAGG	NA	False	NA	NA	False	NA	NA	NA	105386306	105392131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
tx.11434	chr7	-	490	4	FSM	ENSMUSG00000043866.12	ENSMUST00000131683.8	601	4	113	-2	113	2	multi-exon	FALSE	canonical	3	1257	junction_1	50.2084543567006	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGATCCCTCCCATGT	6831	False	NA	NA	False	NA	NA	NA	105393176	105392100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036
tx.11435	chr7	-	2437	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	10	1111	-8	-3	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	105401432	105395128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
tx.11436	chr7	-	887	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	38	6375	-33	76	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	1003	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGGTCTAGTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	105460268	105458787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_105459352_105459656_105459726_105460014
tx.11437	chr7	-	464	2	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTACTTTTGTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	106838166	106837000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_106837208_106837909
tx.11438	chr7	+	985	4	NNC	ENSMUSG00000057215.7	novel	1294	6	NA	NA	-12	-4402	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	8.98146239020499	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGTGTTTGTCCCA	NA	False	NA	NA	False	NA	NA	NA	106842216	106895201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_106842336_106883988_106884145_106884819_106884938_106894609
tx.11439	chr7	+	1995	3	FSM	ENSMUSG00000051041.9	ENSMUST00000120990.2	1685	3	-37	-273	-37	273	multi-exon	FALSE	canonical	2	7	junction_1	2.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATTAGTTACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	107166615	107190574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_107167102_107170243_107170533_107189354
tx.1144	chr10	-	693	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	19	4	13	-4	multi-exon	FALSE	canonical	3	302	junction_2	73.5	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTCTTACTATACATTC	NA	False	NA	NA	False	NA	NA	NA	82459011	82455688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_82456052_82458541_82458659_82458798
tx.11440	chr7	+	994	8	FSM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	260	1260	260	683	multi-exon	FALSE	canonical	3	2245	junction_2	107.423632105296	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTGATGCGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	108533883	108540898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
tx.11441	chr7	+	447	3	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	6262	1260	371	683	3prime_fragment	FALSE	canonical	3	2450	junction_2	62.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTGATGCGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	108539885	108540898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_108539988_108540100_108540215_108540667
tx.11442	chr7	+	321	2	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	6501	1260	610	683	3prime_fragment	FALSE	canonical	3	2450	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTGATGCGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	108540124	108540898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_108540215_108540667
tx.11443	chr7	-	1900	5	FSM	ENSMUSG00000048330.15	ENSMUST00000133876.2	3258	5	-3	1361	-3	-1361	multi-exon	FALSE	canonical	3	56	junction_3	4.55521678957215	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGCATCATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	108682521	108645949	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
tx.11444	chr7	-	1679	4	ISM	ENSMUSG00000048330.15	ENSMUST00000120876.2	1633	6	25377	8797	-121	-1363	internal_fragment	FALSE	canonical	3	26	junction_1	16.996731711976	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTGCATCATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	108657152	108645951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_108647301_108653571_108653666_108655950_108656024_108656989
tx.11445	chr7	-	917	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	101	-106	101	3	multi-exon	FALSE	canonical	3	61	junction_1	6.37704215656966	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGCATTGTTCACAT	NA	False	NA	NA	False	NA	NA	NA	108774313	108737775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
tx.11446	chr7	-	2352	13	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51229	160	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	19.7188573029304	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACATCCATTTCATGTAA	NA	False	NA	NA	False	NA	NA	NA	108986795	108878269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108939575_108939687_108940495_108940847_108986659
tx.11447	chr7	-	1728	11	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51238	7	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_10	9.45568612000208	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTCACGTGTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	108986786	108878422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
tx.11448	chr7	+	1447	2	Antisense	novelGene_ENSMUSG00000031026.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATGGTTTATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	109046525	109049625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr7_+_109046656_109048308
tx.11449	chr7	+	564	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	0	594	0	7	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	460	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCATCCTTCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	109118353	109120980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
tx.1145	chr10	-	594	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	-17	-171	-11	-4	multi-exon	FALSE	canonical	3	187	junction_2	131	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTCTTACTATACATTC	NA	False	NA	NA	False	NA	NA	NA	82459041	82455688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_82456052_82458541_82458659_82458927
tx.11450	chr7	+	1025	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	0	3	0	-3	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCATTTTATTGCTATT	NA	False	NA	NA	False	NA	NA	NA	109302896	109311393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
tx.11451	chr7	+	1077	5	ISM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	117	3	55	-3	3prime_fragment	FALSE	canonical	3	347	junction_1	28.0624304008046	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCATTTTATTGCTATT	NA	False	NA	NA	False	NA	NA	NA	109303013	109311393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
tx.11452	chr7	-	1680	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	23	0	-10	0	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTTTCTGTTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	109351463	109335040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
tx.11453	chr7	-	2350	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	188	1302	-4	-4	multi-exon	TRUE	canonical	3	346	junction_6	24.644133852366	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGTATCTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	109585470	109572695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
tx.11454	chr7	+	4239	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	35	489	-6	5	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGATCTGATTGCAAT	7233	False	NA	NA	False	NA	NA	NA	109617515	109655327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
tx.11455	chr7	+	3015	16	FSM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	-8	-376	-8	0	multi-exon	FALSE	canonical	3	74	junction_4	56.3191698171137	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	109660908	109694601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
tx.11456	chr7	+	3032	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	-22	-7	-22	0	multi-exon	TRUE	canonical	3	81	junction_4	55.3423285861133	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	109660894	109694601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
tx.11457	chr7	+	1202	5	FSM	ENSMUSG00000031015.9	ENSMUST00000210743.2	1163	5	-29	-10	-8	10	multi-exon	FALSE	canonical	3	314	junction_3	17.753520777581	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGTAAGATGATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	109820909	109865494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042
tx.11458	chr7	+	3967	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	-8	68	-8	-68	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	109820909	109882645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
tx.11459	chr7	+	596	4	FSM	ENSMUSG00000031015.9	ENSMUST00000210513.2	1670	4	-30	1104	-6	-1104	multi-exon	FALSE	canonical	3	314	junction_3	8.83176086632785	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCTTTCTGCATGGGA	NA	False	NA	NA	False	NA	NA	NA	109820931	109863182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086
tx.1146	chr10	-	766	2	FSM	ENSMUSG00000063320.12	ENSMUST00000176200.8	586	2	-187	7	24	-7	multi-exon	FALSE	canonical	3	449	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGTCTTACTATACA	NA	False	NA	NA	False	NA	NA	NA	82458947	82455691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_82456052_82458541
tx.11460	chr7	+	1394	4	FSM	ENSMUSG00000030790.16	ENSMUST00000033054.10	1390	4	-4	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCGGTTCATGCAT	5109	False	NA	NA	False	NA	NA	NA	110226863	110229027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_110227029_110227463_110227584_110227731_110227882_110228068
tx.11461	chr7	-	3984	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	39	9	-16	-9	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGCATCCGTAGGTGT	NA	False	NA	NA	False	NA	NA	NA	110443625	110412746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
tx.11462	chr7	+	1189	2	FSM	ENSMUSG00000005609.17	ENSMUST00000146709.2	765	2	-68	-356	-6	356	multi-exon	FALSE	canonical	3	174	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTAATGTTACCTTGAT	493	False	NA	NA	False	NA	NA	NA	110628151	110630372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_110628389_110629420
tx.11463	chr7	+	4256	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	44	0	0	0	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	543	False	NA	NA	False	NA	NA	NA	110628201	110655584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
tx.11464	chr7	-	3789	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	24	4182	11	0	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	NA	False	NA	NA	NA	110682213	110671138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
tx.11465	chr7	-	3689	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	-3	0	-1	0	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	NA	False	NA	NA	NA	110682227	110671138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
tx.11466	chr7	-	254	2	ISM	ENSMUSG00000005610.18	ENSMUST00000162394.2	716	3	-179	1183	11	-685	5prime_fragment	FALSE	canonical	3	5111	junction_1	0	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCATCCATTAATATTAT	NA	False	NA	NA	False	NA	NA	NA	110682213	110680808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_110680841_110681991
tx.11467	chr7	+	1470	2	ISM	ENSMUSG00000059263.10	ENSMUST00000210591.2	2784	4	-156	4410	-4	-4410	5prime_fragment	FALSE	canonical	3	352	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTGACATTCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	111622706	111653646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_111622954_111652423
tx.11468	chr7	-	3277	7	ISM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	620	9	620	-9	3prime_fragment	FALSE	canonical	3	37	junction_5	9.03234926989282	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCTGTGTCCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	111757644	111715232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389
tx.11469	chr7	+	1544	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	197	2713	-2	9	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTCATTAGGTTTAT	3526	False	NA	NA	False	NA	NA	NA	112027109	112188186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
tx.1147	chr10	+	1361	9	ISM	ENSMUSG00000034674.19	ENSMUST00000092266.11	2959	10	-8	2105	-8	-17	5prime_fragment	FALSE	canonical	3	474	junction_8	272.214988566023	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	82465653	82484053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_82465774_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786
tx.11470	chr7	-	1689	2	Antisense	novelGene_ENSMUSG00000055116.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCAGGCCCCTTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	112861877	112858845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr7_-_112860287_112861629
tx.11471	chr7	+	1704	9	ISM	ENSMUSG00000055116.9	ENSMUST00000211770.2	2464	20	60835	-286	-9962	0	3prime_fragment	FALSE	canonical	3	70	junction_1	14.6287388383278	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTTCCCAATTGATAA	NA	False	NA	NA	False	NA	NA	NA	112894664	112913333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
tx.11472	chr7	+	1675	9	NNC	ENSMUSG00000055116.9	novel	2554	17	NA	NA	-9936	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	26.2794477681705	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTTCCCAATTGATAA	NA	False	NA	NA	False	NA	NA	NA	112894690	112913333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_112894801_112898396_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
tx.11473	chr7	-	2615	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	-34	0	19	0	multi-exon	FALSE	canonical	3	112	junction_8	39.4138300600183	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACCTTGGCTAGATTC	NA	False	NA	NA	False	NA	NA	NA	112968580	112914832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
tx.11474	chr7	-	1242	3	ISM	ENSMUSG00000038187.15	ENSMUST00000117577.8	2384	8	21473	18	5497	-1	3prime_fragment	FALSE	canonical	3	202	junction_2	6.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGACCAACTTTATG	NA	False	NA	NA	False	NA	NA	NA	112925019	112914850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_112915947_112921886_112921998_112924984
tx.11475	chr7	-	2371	9	FSM	ENSMUSG00000038187.15	ENSMUST00000119278.8	2394	9	23	0	23	0	multi-exon	FALSE	canonical	3	59	junction_7	50.6814500088543	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGACCAACTTTATGA	NA	False	NA	NA	False	NA	NA	NA	112968576	112914849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968166_112968405
tx.11476	chr7	-	2440	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_7	47.410734836931	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGACCAACTTTATGA	NA	False	NA	NA	False	NA	NA	NA	112968580	112914849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112964111_112964177_112968078_112968166_112968405
tx.11477	chr7	-	2522	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	62.9638344166272	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGACCAACTTTATG	NA	False	NA	NA	False	NA	NA	NA	112968570	112914850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112968078_112968166_112968405
tx.11478	chr7	+	4326	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	10	626	10	427	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	NA	NA	NA	113113050	113170092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
tx.11479	chr7	+	1656	11	ISM	ENSMUSG00000030759.17	ENSMUST00000164745.8	3972	13	25429	2080	-8168	173	3prime_fragment	FALSE	canonical	2	280	junction_9	52.8075752141679	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAATTATGGTCCATTT	NA	False	NA	NA	False	NA	NA	NA	113138497	113167585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
tx.1148	chr10	+	2377	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	110	2950	-94	-1917	5prime_fragment	FALSE	canonical	3	69	junction_7	9.81666256450355	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATATGGATTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	82534950	82575312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
tx.11480	chr7	-	3349	22	FSM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	-5	2	-5	-2	multi-exon	FALSE	canonical	3	435	junction_12	34.3731688854697	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTATCTGTGGGATTT	NA	False	NA	NA	False	NA	NA	NA	113853951	113814795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
tx.11481	chr7	-	1155	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	44	2	-7	-2	multi-exon	TRUE	canonical	3	2548	junction_6	196.061655709387	2722	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	113875309	113863842	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
tx.11482	chr7	-	956	5	FSM	ENSMUSG00000030669.14	ENSMUST00000032906.11	994	5	34	4	-11	-4	multi-exon	FALSE	canonical	3	77	junction_2	7.39932429347437	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGGAGTCTTTGCTGT	2068	False	NA	NA	False	NA	NA	NA	114235558	114230716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235446
tx.11483	chr7	-	829	4	FSM	ENSMUSG00000030669.14	ENSMUST00000032907.9	830	4	3	-2	-2	2	multi-exon	FALSE	canonical	3	6	junction_1	40.2022663816634	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAACCATGGTGGTCATT	2082	False	NA	NA	False	NA	NA	NA	114235544	114232525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_114233021_114233702_114233844_114234361_114234457_114235446
tx.11484	chr7	-	195	2	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAGCTTTAAAAATCCT	9325	False	NA	NA	False	NA	NA	NA	115713414	115685283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_115685456_115713391
tx.11485	chr7	+	1341	5	FSM	ENSMUSG00000030663.13	ENSMUST00000106608.8	927	5	-35	-379	0	0	multi-exon	FALSE	canonical	3	9	junction_1	736.785755834082	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	115692535	115704445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_115692623_115698674_115698759_115701178_115701240_115702445_115702556_115703446
tx.11486	chr7	+	1451	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	28	0	-7	0	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	1361	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	115692563	115704445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
tx.11487	chr7	-	480	4	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-8	-89991	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	124.389174234202	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGTGAGATGAGGTCTA	NA	False	NA	NA	False	NA	NA	NA	115907598	115870469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_115870702_115907159_115907218_115907306_115907384_115907485
tx.11488	chr7	-	568	6	FSM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	16	5	-13	0	multi-exon	FALSE	canonical	3	42	junction_1	4075.24362952695	460	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	115933414	115930744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
tx.11489	chr7	+	1526	13	NIC	ENSMUSG00000030659.15	novel	1685	14	NA	NA	-8	4	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	13.8283123417944	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGTTTTTATCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	116103595	116139823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_116103720_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
tx.1149	chr10	+	1121	6	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	25335	2950	-4007	-1917	internal_fragment	FALSE	canonical	3	81	junction_1	8.49941174435031	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATATGGATTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	82560175	82575312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
tx.11490	chr7	+	1686	14	FSM	ENSMUSG00000030659.15	ENSMUST00000032895.15	1685	14	3	-4	3	4	multi-exon	FALSE	canonical	3	41	junction_2	11.132340009308	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGTTTTTATCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	116103606	116139823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
tx.11491	chr7	-	459	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	28	4692	28	0	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	7872	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	117715383	117708286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
tx.11492	chr7	-	2076	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	86	9	0	-9	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	1432	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCACTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	117728799	117718122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
tx.11493	chr7	-	869	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	45	0	3	0	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	627	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6670	False	NA	NA	False	NA	NA	NA	118132534	118124284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
tx.11494	chr7	-	4513	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	33	0	6	0	multi-exon	FALSE	canonical	3	106	junction_8	12.8571640211466	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTGGGTGCGTGTTG	4177	False	NA	NA	False	NA	NA	NA	118183926	118135063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
tx.11495	chr7	-	1562	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	9	11	9	-11	multi-exon	TRUE	canonical	3	428	junction_5	40.804901666344	218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGGCAAACTGTGTACT	NA	False	NA	NA	False	NA	NA	NA	118304992	118287778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
tx.11496	chr7	+	496	3	ISM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	-1	21510	-1	-16948	5prime_fragment	FALSE	canonical	3	102	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACTTAGTAATTATTTA	NA	False	NA	NA	False	NA	NA	NA	118311773	118314737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_118311972_118313328_118313472_118314582
tx.11497	chr7	+	3109	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	511	1477	5	0	multi-exon	TRUE	canonical	3	302	junction_1	75.0223744403406	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTCGGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	118339959	118440712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
tx.11498	chr7	-	1742	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGGTCACCTTCCGTTAA	NA	False	NA	NA	False	NA	NA	NA	118454907	118444722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
tx.11499	chr7	-	1782	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	314	3286	0	-7	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGGCCTAGGGTCACCT	NA	False	NA	NA	False	NA	NA	NA	118454907	118444730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
tx.115	chr1	-	1631	6	FSM	ENSMUSG00000026049.12	ENSMUST00000147571.8	1360	6	-74	-197	1	0	multi-exon	FALSE	canonical	3	149	junction_5	107.444125013888	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	NA	False	NA	NA	NA	44141596	44125772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059
tx.1150	chr10	-	2340	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	8	-75	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	324.615884118788	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTACATCGTAACTT	NA	False	NA	NA	False	NA	NA	NA	82599970	82584609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599837
tx.11500	chr7	-	933	2	ISM	ENSMUSG00000030980.18	ENSMUST00000126792.9	3253	4	308	8680	0	293	5prime_fragment	FALSE	canonical	3	591	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	118454907	118451692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_118452564_118454845
tx.11501	chr7	-	1798	2	FSM	ENSMUSG00000008734.10	ENSMUST00000207614.2	686	2	26	-1138	26	-641	multi-exon	FALSE	canonical	3	70	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTCTCTGCTGTGTCC	8726	False	NA	NA	False	NA	NA	NA	118575979	118572872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_118574427_118575735
tx.11502	chr7	-	753	2	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGCCTTCTTCCTCTC	NA	False	NA	NA	False	NA	NA	NA	118622950	118610807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_118611350_118622739
tx.11503	chr7	-	2670	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	19	0	-15	0	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	141	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	119320002	119314315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
tx.11504	chr7	+	1268	2	FSM	ENSMUSG00000100153.3	ENSMUST00000207161.2	1437	2	187	-18	-15	18	multi-exon	FALSE	canonical	3	469	junction_1	0	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339335	119341467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_119340294_119341157
tx.11505	chr7	-	3473	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	77	14	1	-1	multi-exon	FALSE	canonical	3	53	junction_1	8.7571399440685	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACATGTAGAACATCAG	NA	False	NA	NA	False	NA	NA	NA	119393204	119383067	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
tx.11506	chr7	+	926	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	-32	-19	-32	-1	multi-exon	FALSE	canonical	3	29	junction_1	16.3095064303001	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTTGTTTTGTTGA	NA	False	NA	NA	False	NA	NA	NA	119495051	119515975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_119495114_119509026_119509186_119513395_119513489_119515363
tx.11507	chr7	+	1127	5	FSM	ENSMUSG00000030922.13	ENSMUST00000054440.11	752	5	-52	-323	-31	0	multi-exon	FALSE	canonical	3	10	junction_1	26.343879744639	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTTTGTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	119495052	119515979	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_119495114_119499333_119499532_119509026_119509186_119513395_119513489_119515363
tx.11508	chr7	+	1397	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	23	64	-19	-64	multi-exon	FALSE	canonical	3	63	junction_3	8.8423695919137	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCTGTGCGATGATT	NA	False	NA	NA	False	NA	NA	NA	119701598	119720145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
tx.11509	chr7	+	1251	4	ISM	ENSMUSG00000030917.14	ENSMUST00000118737.3	1395	6	2146	70	1741	-64	3prime_fragment	FALSE	canonical	3	63	junction_2	8.60232526704263	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCTGTGCGATGATT	NA	False	NA	NA	False	NA	NA	NA	119703858	119720145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_119704053_119714608_119714778_119715442_119715582_119719396
tx.1151	chr10	-	1261	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	2	1291	2	482	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCTTTATTATAAATTT	NA	False	NA	NA	False	NA	NA	NA	82599976	82585825	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
tx.11510	chr7	-	1263	8	FSM	ENSMUSG00000030905.6	ENSMUST00000033198.6	1383	8	114	6	114	-6	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTCCTTTGACAAC	NA	False	NA	NA	False	NA	NA	NA	119801220	119785608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_119785922_119788948_119789034_119789674_119789797_119794547_119794732_119796872_119796975_119798470_119798534_119800299_119800451_119800977
tx.11511	chr7	+	1430	3	NIC	ENSMUSG00000051900.13	novel	3551	11	NA	NA	-50	-47460	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGTCTATGTGTATT	NA	False	NA	NA	False	NA	NA	NA	120008819	120031462	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_120008990_120026352_120026481_120030330
tx.11512	chr7	+	1129	5	NIC	ENSMUSG00000051900.13	novel	3551	11	NA	NA	-34	-43419	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	0.82915619758885	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTGAATTCCATAGTC	NA	False	NA	NA	False	NA	NA	NA	120008835	120035503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_120008990_120026352_120026481_120030330_120030473_120032565_120032826_120035058
tx.11513	chr7	+	1613	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	37	246	-27	-246	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	524	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGCATTCTTTCTAAG	NA	False	NA	NA	False	NA	NA	NA	120234435	120258501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
tx.11514	chr7	-	2104	2	FSM	ENSMUSG00000097343.3	ENSMUST00000180977.3	1812	2	8	-300	8	1	multi-exon	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTGGCCCAAATTTC	NA	False	NA	NA	False	NA	NA	NA	120276785	120272657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_120274500_120276523
tx.11515	chr7	+	689	2	FSM	ENSMUSG00000046096.8	ENSMUST00000208454.2	813	2	118	6	58	3	multi-exon	FALSE	canonical	3	191	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAGGTGAAGGCAGTC	NA	False	NA	NA	False	NA	NA	NA	120276960	120325898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_120277094_120325342
tx.11516	chr7	+	3111	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	20	3449	20	0	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGCCTTTATACATGC	NA	False	NA	NA	False	NA	NA	NA	120442073	120503224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
tx.11517	chr7	+	3009	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	2	1183	2	0	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	120517008	120545472	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
tx.11518	chr7	+	1606	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	217	0	217	0	multi-exon	FALSE	canonical	3	223	junction_4	46.4435140789325	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9644	False	NA	NA	False	NA	NA	NA	120633884	120676058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
tx.11519	chr7	+	1503	5	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	317	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	108.278287297131	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9744	False	NA	NA	False	NA	NA	NA	120633984	120676058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675355
tx.1152	chr10	+	3405	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	-1	-1107	-1	0	multi-exon	TRUE	canonical	1	267	junction_3	142.059218034492	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	NA	False	NA	NA	NA	82695039	82733546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
tx.11520	chr7	-	2891	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	14	-3	-3	3	multi-exon	TRUE	canonical	3	174	junction_8	14.1585607937389	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTTTCCTTCTTCTCTG	8938	False	NA	NA	False	NA	NA	NA	121580920	121522058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
tx.11521	chr7	-	1552	5	ISM	ENSMUSG00000030872.15	ENSMUST00000144779.2	2351	10	5125	0	1683	0	3prime_fragment	FALSE	canonical	3	830	junction_4	23.3920392441531	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGGTGTTGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	121596589	121587987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513
tx.11522	chr7	-	2837	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	35	2043	0	0	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGGTGTTGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	121620410	121587987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
tx.11523	chr7	-	2021	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	187	-162	-6	162	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGCCAGTGCGTCATTA	NA	False	NA	NA	False	NA	NA	NA	121666299	121637881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
tx.11524	chr7	+	1295	6	ISM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	697	3036	425	547	3prime_fragment	FALSE	canonical	3	672	junction_3	19.7281524730523	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTGTGTGTGCTCA	NA	False	NA	NA	False	NA	NA	NA	121667094	121678381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
tx.11525	chr7	-	638	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	3	775	3	0	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	489	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTTCTCAATTAGTTT	6396	False	NA	NA	False	NA	NA	NA	121701071	121690053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
tx.11526	chr7	+	1511	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	21	0	8	0	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	155	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	False	NA	NA	False	NA	NA	NA	121732284	121748267	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
tx.11527	chr7	+	2174	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	29	-4	29	4	multi-exon	FALSE	canonical	3	1108	junction_2	92.3724345606776	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCTCTTTTTGGTCT	NA	False	NA	NA	False	NA	NA	NA	121758690	121769100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
tx.11528	chr7	+	811	3	ISM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	9408	-4	9266	4	3prime_fragment	FALSE	canonical	3	1128	junction_1	24.5	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCTCTTTTTGGTCT	NA	False	NA	NA	False	NA	NA	NA	121768069	121769100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_121768207_121768303_121768487_121768609
tx.11529	chr7	+	252	3	ISM	ENSMUSG00000052707.9	ENSMUST00000206888.2	3625	9	-75	33891	0	-18862	5prime_fragment	FALSE	canonical	3	106	junction_2	15.5	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACGACAAGAAAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	122723403	122743024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_122723556_122723890_122723939_122742972
tx.1153	chr10	+	3298	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	27	0	-1	0	multi-exon	FALSE	canonical	1	113	junction_1	208.745903123884	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	NA	False	NA	NA	NA	82695039	82733546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
tx.11530	chr7	+	1307	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	55	7	-19	2	multi-exon	FALSE	canonical	0	0	junction_5	88.7783757454483	298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTACATCTGTACAAT	6879	False	NA	NA	False	NA	NA	NA	122977259	123029574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
tx.11531	chr7	+	1540	6	FSM	ENSMUSG00000030762.12	ENSMUST00000033023.10	1487	6	-58	5	-58	1	multi-exon	FALSE	canonical	3	25	junction_2	2.57681974534503	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGTGTCTGTTGACTT	4318	False	NA	NA	False	NA	NA	NA	123061455	123067222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_123061682_123061796_123062042_123063411_123063539_123064331_123064547_123065808_123065944_123066630
tx.11532	chr7	-	701	5	NNC	ENSMUSG00000108814.2	novel	494	4	NA	NA	-455	157	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	2.8613807855649	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTTTTTATTTAATTT	NA	False	NA	NA	False	NA	NA	NA	125017741	125016008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_125016315_125016649_125016844_125017022_125017107_125017219_125017292_125017696
tx.11533	chr7	+	2421	8	FSM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	-26	-6	-26	6	multi-exon	FALSE	canonical	3	41	junction_7	4.74664220738176	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATTTCTTTAACCAGA	NA	False	NA	NA	False	NA	NA	NA	125043821	125061447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_125043965_125051399_125051901_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
tx.11534	chr7	-	963	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	153	4	-44	-4	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	598	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGCTTGTGTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	125090615	125066815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
tx.11535	chr7	-	1261	12	FSM	ENSMUSG00000030742.8	ENSMUST00000032997.8	1235	12	-26	0	10	0	multi-exon	FALSE	canonical	3	34	junction_9	5.32264769756525	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTCGTTGTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	125968732	125962998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967755_125967973_125968009_125968113_125968142_125968319
tx.11536	chr7	-	2188	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	24	7	-5	0	multi-exon	TRUE	canonical	3	348	junction_9	48.6508899292612	206	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	125976598	125969238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
tx.11537	chr7	-	3376	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	9	3	9	-3	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGCTGGTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	125995900	125982028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
tx.11538	chr7	+	1296	3	FSM	ENSMUSG00000030727.13	ENSMUST00000141764.2	742	3	-62	-492	-29	492	multi-exon	FALSE	canonical	3	185	junction_2	11	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCATATATTTCCATATG	NA	False	NA	NA	False	NA	NA	NA	126028208	126035797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126028329_126028747_126028958_126034831
tx.11539	chr7	+	2234	12	NNC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.1880331980083	57	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGTGCCTGCAAGC	NA	False	NA	NA	False	NA	NA	NA	126028239	126045077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043490_126043694_126043751_126043991_126044109_126044468
tx.1154	chr10	+	2309	6	ISM	ENSMUSG00000020250.12	ENSMUST00000219442.3	3531	14	24184	-2	-2361	0	3prime_fragment	FALSE	canonical	3	702	junction_1	67.8781260790249	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	NA	False	NA	NA	NA	82720318	82733546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
tx.11540	chr7	+	1688	10	FSM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	-9	0	-9	0	multi-exon	FALSE	canonical	3	611	junction_6	33.4490583749803	356	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTTGTCTTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	126086523	126089899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
tx.11541	chr7	-	3411	23	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	241.997545407946	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	6928	False	NA	NA	False	NA	NA	NA	126101586	126090884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
tx.11542	chr7	-	1732	11	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	8643	456	8436	-456	3prime_fragment	FALSE	canonical	3	2324	junction_9	216.464870129081	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	4062	False	NA	NA	False	NA	NA	NA	126156940	126146082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855
tx.11543	chr7	-	1940	13	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	7512	456	7305	-456	3prime_fragment	FALSE	canonical	3	2182	junction_12	251.628073751718	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	2931	False	NA	55	True	NA	NA	NA	126158071	126146082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024
tx.11544	chr7	-	2911	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	16	456	16	-456	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	235	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	126165567	126146082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
tx.11545	chr7	-	1628	14	FSM	ENSMUSG00000030720.17	ENSMUST00000098036.9	1571	14	-57	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	40.0146422904558	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	126182419	126171257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180817_126180915_126181935_126182015_126182171
tx.11546	chr7	-	1704	15	FSM	ENSMUSG00000030720.17	ENSMUST00000032962.11	2386	15	-4	686	-4	0	multi-exon	FALSE	canonical	3	116	junction_11	19.7815880173912	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	126182423	126171257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
tx.11547	chr7	-	1603	16	ISM	ENSMUSG00000030720.17	ENSMUST00000116269.9	2487	17	924	686	6	0	3prime_fragment	FALSE	canonical	3	45	junction_15	32.0638252379358	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	126182528	126171257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474
tx.11548	chr7	-	646	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	184	-1	-17	1	multi-exon	FALSE	canonical	3	3716	junction_2	16	890	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCGTGTGTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	126224664	126222419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126222752_126224061_126224206_126224494
tx.11549	chr7	+	1414	9	ISM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	3	146	0	0	intron_retention	FALSE	canonical	3	419	junction_3	30.3840007240653	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	114	False	NA	NA	False	NA	NA	NA	126248483	126271951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327
tx.1155	chr10	-	1312	2	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAGTGACTTTCAGCTC	7391	False	NA	NA	False	NA	NA	NA	82756754	82753047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_-_82754279_82756673
tx.11550	chr7	+	1163	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	3	146	0	0	multi-exon	FALSE	canonical	3	419	junction_3	31.8433666561813	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	114	False	NA	NA	False	NA	NA	NA	126248483	126271951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
tx.11551	chr7	-	1951	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	1	1200	1	10	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTAGCCGGGCGTGGTGG	4988	False	NA	NA	False	NA	NA	NA	126294955	126289839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
tx.11552	chr7	+	382	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	519	365	-11	0	multi-exon	FALSE	canonical	3	2284	junction_2	148	1410	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1130	False	NA	NA	False	NA	NA	NA	126295126	126295865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126295272_126295354_126295453_126295726
tx.11553	chr7	+	1779	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	19	2	19	-2	multi-exon	FALSE	canonical	3	189	junction_5	18.155147341732	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGCCTCTGTCTGTGT	5235	False	NA	NA	False	NA	NA	NA	126358791	126364989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
tx.11554	chr7	+	1124	10	FSM	ENSMUSG00000030703.9	ENSMUST00000032944.9	1148	10	24	0	24	0	multi-exon	TRUE	canonical	1	3	junction_3	2.43938871112224	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTCATGGAACAAGGG	NA	False	NA	NA	False	NA	NA	NA	126365529	126374817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126365782_126366073_126366117_126366346_126366483_126366562_126366609_126366738_126366858_126366934_126367025_126367741_126367876_126370159_126370220_126370333_126370386_126374625
tx.11555	chr7	-	1392	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	10	-2	10	0	multi-exon	FALSE	canonical	3	2424	junction_1	142.291307979548	405	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	5236	False	NA	NA	False	NA	NA	NA	126391502	126385037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
tx.11556	chr7	-	1383	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	-24	0	-24	0	multi-exon	FALSE	canonical	3	1828	junction_8	282.244574792856	1178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	5046	False	NA	NA	False	NA	NA	NA	126391692	126385037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
tx.11557	chr7	-	1441	9	FSM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	70	0	-14	0	multi-exon	FALSE	canonical	3	19253	junction_4	564.678448322583	5784	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	126398356	126394405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
tx.11558	chr7	-	1940	7	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	58	junction_3	312.41341022576	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTTGTGCTTGGAT	9163	False	NA	NA	False	NA	NA	NA	126461041	126450755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_126452164_126456397_126456515_126456847_126456895_126457045_126457125_126460411_126460465_126460647_126460719_126460876
tx.11559	chr7	-	1160	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	-31	844	0	4	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCCTTTCCTCTATTTG	9163	False	NA	NA	False	NA	NA	NA	126461041	126451600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
tx.1156	chr10	-	688	2	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCCTACTGTGTGGACT	7410	False	NA	NA	False	NA	NA	NA	82756735	82753704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_-_82754279_82756621
tx.11560	chr7	-	1245	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	206	junction_2	316.419574202949	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9166	False	NA	NA	False	NA	NA	NA	126461038	126451604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
tx.11561	chr7	+	2053	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	465	248	-2	211	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCCCAAACCGTCATGC	1941	False	NA	NA	False	NA	NA	NA	126461608	126464301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
tx.11562	chr7	+	1405	4	ISM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	1747	36	-124	-36	3prime_fragment	FALSE	canonical	3	257	junction_1	7.34846922834953	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAATAAAGCCCTGGGT	3223	False	NA	NA	False	NA	NA	NA	126462890	126464513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_126463423_126463491_126463658_126463734_126463834_126463905
tx.11563	chr7	-	890	5	FSM	ENSMUSG00000060538.15	ENSMUST00000120007.8	1087	5	196	1	196	-1	multi-exon	FALSE	canonical	3	60	junction_1	3.20156211871642	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTAAGGTACTTACT	7267	False	NA	NA	False	NA	NA	NA	126496400	126485390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197
tx.11564	chr7	-	929	6	FSM	ENSMUSG00000060538.15	ENSMUST00000032926.12	941	6	13	-1	-10	-1	multi-exon	FALSE	canonical	3	26	junction_5	14.8781719307178	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTAAGGTACTTACT	6232	False	NA	NA	False	NA	NA	NA	126497435	126485390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496400_126497395
tx.11565	chr7	-	926	6	FSM	ENSMUSG00000060538.15	ENSMUST00000121532.8	915	6	-10	-1	-10	-1	multi-exon	FALSE	canonical	3	22	junction_5	16.451139778143	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTAAGGTACTTACT	6232	False	NA	NA	False	NA	NA	NA	126497435	126485390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496397_126497395
tx.11566	chr7	+	1674	6	FSM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	-1	3	-1	-3	multi-exon	FALSE	canonical	3	174	junction_2	8.49470423263812	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTGACTCTCGGGT	NA	False	NA	NA	False	NA	NA	NA	126528049	126544800	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
tx.11567	chr7	+	1247	5	ISM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	1752	11	710	-11	3prime_fragment	FALSE	canonical	3	174	junction_1	5.53962995154008	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAGGTCTGCTGCTGAC	NA	False	NA	NA	False	NA	NA	NA	126529802	126544792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
tx.11568	chr7	+	1888	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	423	-337	-41	0	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	NA	False	NA	NA	NA	126575508	126579671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
tx.11569	chr7	-	1680	8	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	20936	4	18180	-4	3prime_fragment	FALSE	canonical	3	89	junction_5	18.1737644500449	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTTCTTTTTCCCTC	8485	False	NA	NA	False	NA	NA	NA	126592857	126586035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691
tx.11570	chr7	-	2780	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	53	4	-18	-4	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTTCTTTTTCCCTC	NA	False	NA	NA	False	NA	NA	NA	126613740	126586035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
tx.11571	chr7	-	1020	5	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	24736	8	21980	-8	3prime_fragment	FALSE	canonical	3	108	junction_4	10.7004672795163	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTATGTTTCTTTTTC	5967	False	NA	NA	False	NA	NA	NA	126589057	126586039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717
tx.11572	chr7	-	1374	3	FSM	ENSMUSG00000107068.2	ENSMUST00000202798.2	1412	3	24	14	24	0	multi-exon	FALSE	canonical	3	276	junction_2	10	267	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCGTGGTGGCGCACG	9454	False	NA	NA	False	NA	NA	NA	126616500	126614236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126614642_126615371_126615455_126615614
tx.11573	chr7	-	1375	4	NIC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	147	22	combination_of_known_splicesites	FALSE	canonical	3	53	junction_3	303.870952141786	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAAGCCCCCTGTTGTG	477	False	NA	NA	False	NA	NA	NA	126625477	126621279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_126622341_126623615_126623788_126624047_126624112_126625399
tx.11574	chr7	-	1583	4	ISM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	841	-4	-479	0	3prime_fragment	FALSE	canonical	3	463	junction_1	152.057737572133	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	1171	False	NA	NA	False	NA	NA	NA	126624783	126621301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475
tx.11575	chr7	-	1467	3	FSM	ENSMUSG00000030678.8	ENSMUST00000206953.2	548	3	-3	-916	-3	0	multi-exon	FALSE	canonical	3	463	junction_1	166.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	1647	False	NA	NA	False	NA	NA	NA	126624307	126621305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126622341_126623615_126623788_126624047
tx.11576	chr7	-	1758	2	ISM	ENSMUSG00000030678.8	ENSMUST00000206953.2	548	3	-34	-916	-34	0	intron_retention	FALSE	canonical	3	463	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	1616	False	NA	NA	False	NA	NA	NA	126624338	126621305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126622341_126623615
tx.11577	chr7	-	2206	13	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-25	0	intron_retention	FALSE	canonical	3	712	junction_7	45.9422191453569	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7962	False	NA	NA	False	NA	NA	NA	126641606	126626900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
tx.11578	chr7	-	2085	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	32	-2	-30	0	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7957	False	NA	NA	False	NA	NA	NA	126641611	126626900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
tx.11579	chr7	+	1880	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	52	0	-13	0	multi-exon	FALSE	canonical	3	90	junction_1	0	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTGTATGACCTCTG	NA	False	NA	NA	False	NA	NA	NA	126690582	126693158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126690645_126691340
tx.11580	chr7	-	1270	3	ISM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	13354	154	13146	-154	3prime_fragment	FALSE	canonical	3	73	junction_2	7	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	126708044	126706439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126707414_126707505_126707638_126707880
tx.11581	chr7	-	1721	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	175	154	-10	-154	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	126721223	126706439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
tx.11582	chr7	-	3324	6	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	0	29	0	0	intron_retention	FALSE	canonical	3	578	junction_3	18.2274518241031	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5520	False	NA	NA	False	NA	NA	NA	126795110	126791196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532
tx.11583	chr7	-	2324	3	ISM	ENSMUSG00000042502.11	ENSMUST00000205525.2	3072	6	1436	2	931	0	3prime_fragment	FALSE	canonical	3	601	junction_2	17	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	6945	False	NA	NA	False	NA	NA	NA	126793685	126791196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126793103_126793186_126793294_126793374
tx.11584	chr7	-	1312	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	-40	2012	10	-14	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTTCTCCATAGCT	5418	False	NA	NA	False	NA	NA	NA	126795212	126792843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
tx.11585	chr7	-	840	4	ISM	ENSMUSG00000042502.11	ENSMUST00000035771.5	1309	7	1097	14	666	-14	3prime_fragment	FALSE	canonical	3	578	junction_3	23.4141457717813	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTTCTCCATAGCT	6680	False	NA	NA	False	NA	NA	NA	126793950	126792843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915
tx.11586	chr7	-	1352	7	NIC	ENSMUSG00000042502.11	novel	1309	7	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	200.670058110876	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTTCTCCATAGCT	5520	False	NA	NA	False	NA	NA	NA	126795110	126792843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794958
tx.11587	chr7	-	2652	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	625	337	-96	-337	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCCTTGTTATTTGAAG	2167	False	NA	NA	False	NA	NA	NA	126807015	126796967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
tx.11588	chr7	+	548	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1516	10	10	0	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	428	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4476	False	NA	NA	False	NA	NA	NA	126812295	126813460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
tx.11589	chr7	-	1179	8	ISM	ENSMUSG00000000486.14	ENSMUST00000106313.8	1285	10	613	-196	541	0	3prime_fragment	FALSE	canonical	3	258	junction_7	43.3942533579021	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGGAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	126816862	126813618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790
tx.1159	chr10	-	3051	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	34	2942	-25	-963	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTAACCTCTTTTTAAC	NA	False	NA	NA	False	NA	NA	NA	83369970	83326255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
tx.11590	chr7	-	1468	11	FSM	ENSMUSG00000000486.14	ENSMUST00000106314.8	1486	11	38	-20	11	5	multi-exon	FALSE	canonical	3	221	junction_10	48.9043965303734	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGAGTCTTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	126817632	126813613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
tx.11591	chr7	+	3004	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	200	138	6	-2	multi-exon	FALSE	canonical	3	192	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTGTGTGGTTATGTG	8308	False	NA	NA	False	NA	NA	NA	126832432	126837213	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_126832659_126834435
tx.11592	chr7	-	649	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	27	0	27	0	multi-exon	FALSE	canonical	3	3852	junction_1	65	1527	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCGATTTTTCTTGAGT	2517	False	NA	NA	False	NA	NA	NA	126859854	126856130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_126856509_126858529_126858641_126859694
tx.11593	chr7	-	1448	3	NNC	ENSMUSG00000045757.7	novel	2405	3	NA	NA	0	-773	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGGATGTACTGTCGTCT	8640	False	NA	NA	False	NA	NA	NA	127005955	127003639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_127004832_127005337_127005452_127005813
tx.11594	chr7	-	1028	3	FSM	ENSMUSG00000045251.14	ENSMUST00000106300.2	1015	3	-13	0	-8	0	multi-exon	FALSE	canonical	3	34	junction_1	2.5	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6905	False	NA	NA	False	NA	NA	NA	127021219	127018138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127018814_127020576_127020691_127020980
tx.11595	chr7	-	1071	2	NNC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6908	False	NA	NA	False	NA	NA	NA	127021216	127018138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_127018814_127020820
tx.11596	chr7	-	910	2	FSM	ENSMUSG00000045251.14	ENSMUST00000126756.2	338	2	-194	-378	-5	-1	multi-exon	FALSE	canonical	3	21	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTGTTTTGTGTTAAG	6908	False	NA	NA	False	NA	NA	NA	127021216	127018139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127018814_127020980
tx.11597	chr7	-	1291	2	FSM	ENSMUSG00000045251.14	ENSMUST00000136123.8	1298	2	5	2	5	0	multi-exon	FALSE	canonical	3	34	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6930	False	NA	NA	False	NA	NA	NA	127021194	127018140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127018814_127020576
tx.11598	chr7	-	2003	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	14	1604	14	15	multi-exon	FALSE	canonical	3	47	junction_1	4.5	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATGGGTGTGTTCTTCT	4371	False	NA	NA	False	NA	NA	NA	127048316	127042911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127044310_127047534_127047649_127047825
tx.11599	chr7	+	2822	2	FSM	ENSMUSG00000086502.2	ENSMUST00000144796.2	1778	2	25	-1069	25	1069	multi-exon	FALSE	canonical	3	8	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAGAAAAAAGAT	928	False	NA	NA	False	NA	NA	NA	127047836	127060601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127048744_127058686
tx.116	chr1	-	1203	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	5	-248	1	0	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	243	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	NA	False	NA	NA	NA	44141596	44125772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
tx.11600	chr7	+	2090	12	ISM	ENSMUSG00000030822.16	ENSMUST00000106292.8	2175	13	646	0	-2	0	3prime_fragment	FALSE	canonical	3	60	junction_1	50.8389126685683	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTCCTTTGTGCC	NA	False	NA	NA	False	NA	NA	NA	127070188	127075931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
tx.11601	chr7	+	2418	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	-14	-2	-14	1	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGACTCCTTTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	127070647	127075932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
tx.11602	chr7	+	2022	10	FSM	ENSMUSG00000053877.13	ENSMUST00000188124.7	2048	10	27	-1	8	1	multi-exon	FALSE	canonical	3	18	junction_9	13.723009424114	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGTTATTGAGTATTA	NA	False	NA	NA	False	NA	NA	NA	127111181	127128495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309
tx.11603	chr7	+	2008	10	NIC	ENSMUSG00000053877.13	novel	2048	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	20	junction_9	13.2282899242868	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGTTATTGAGTATTA	NA	False	NA	NA	False	NA	NA	NA	127111198	127128495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306
tx.11604	chr7	+	1546	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	38.180492401225	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATGTCTGCTGTCTAG	NA	False	NA	NA	False	NA	NA	NA	127172521	127182478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_127172629_127173025_127173139_127176706_127176861_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
tx.11605	chr7	+	1484	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	-14	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	33.5016324229134	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGCCATGTCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	127172537	127182474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
tx.11606	chr7	+	1616	10	FSM	ENSMUSG00000030815.12	ENSMUST00000033086.8	1570	10	-47	1	17	1	multi-exon	FALSE	canonical	3	46	junction_3	31.2018517968975	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATGTCTGCTGTCTAG	NA	False	NA	NA	False	NA	NA	NA	127172528	127182478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
tx.11607	chr7	-	1173	9	FSM	ENSMUSG00000057176.5	ENSMUST00000072155.5	2536	9	391	972	-35	5	multi-exon	FALSE	canonical	3	15	junction_4	3.80788655293195	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCACCTTCTGGGTTTCC	8677	False	NA	NA	False	NA	NA	NA	127187376	127182526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127184434_127184625_127184697_127185446_127185617_127185994_127186061_127186735_127186768_127187048
tx.11608	chr7	-	897	5	ISM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	712	0	-146	0	3prime_fragment	FALSE	canonical	3	471	junction_4	32.6993883734849	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	False	NA	NA	False	NA	NA	NA	127307393	127304149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051
tx.11609	chr7	+	2011	2	ISM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	19111	0	19111	0	3prime_fragment	FALSE	canonical	3	128	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	127366556	127368655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_127366836_127366923
tx.11610	chr7	+	1852	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	2	142	2	-142	multi-exon	FALSE	canonical	3	68	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCTATGGCTATGAATG	NA	False	NA	NA	False	NA	NA	NA	127368988	127374180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127369389_127372728
tx.11612	chr7	+	1828	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	-1	1	-1	-1	multi-exon	TRUE	canonical	3	65	junction_6	10.2794292967395	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACCTTTTACCC	1883	False	NA	NA	False	NA	NA	NA	127399774	127402973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
tx.11613	chr7	+	1443	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	6	7	6	-7	multi-exon	FALSE	canonical	3	172	junction_3	24.7872951327893	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGCCAGCTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	127440941	127448184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
tx.11614	chr7	+	1760	10	NIC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	-234	0	intron_retention	FALSE	canonical	3	172	junction_3	25.7681974534502	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTGCAGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	127440701	127448191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447840_127447922
tx.11615	chr7	-	2491	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	681	2596	-13	74	multi-exon	FALSE	canonical	3	42	junction_2	4	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTTGTTTAGCCTCT	NA	False	NA	NA	False	NA	NA	NA	127475319	127464814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127466536_127466927_127467597_127475218
tx.11616	chr7	-	748	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	18.5	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGCATATGTCTGCC	NA	False	NA	NA	False	NA	NA	NA	127494789	127492234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127492664_127493676_127493787_127494580
tx.11617	chr7	+	1802	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	5	1598	5	15	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGAGGGCAGGCGAGC	NA	False	NA	NA	False	NA	NA	NA	127503258	127507795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
tx.11618	chr7	+	1516	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	0	63	0	-63	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGAGATGCCAAAGGGTG	NA	False	NA	NA	False	NA	NA	NA	127511687	127524946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
tx.11619	chr7	-	1872	5	NNC	ENSMUSG00000030800.11	novel	1852	6	NA	NA	-13	-1	intron_retention	FALSE	canonical	0	0	junction_4	13.1244047484067	6	4	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTACACATATTTACA	NA	False	NA	NA	False	NA	NA	NA	127529289	127524888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528943
tx.11620	chr7	-	1031	5	FSM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	-15	0	-15	0	multi-exon	FALSE	canonical	3	15	junction_3	32.1820990614348	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	NA	NA	NA	127534666	127531809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534618
tx.11621	chr7	-	1174	5	NIC	ENSMUSG00000070371.12	novel	3028	15	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	30.0863341070327	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	NA	NA	NA	127534689	127531809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533561_127533800_127534618
tx.11622	chr7	-	910	4	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	36.3409777890836	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	NA	NA	NA	127534691	127531809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_127532287_127532542_127532665_127533561_127533800_127534618
tx.11623	chr7	+	1837	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	30	3669	-3	0	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1180	False	NA	NA	False	NA	NA	NA	127566658	127581204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
tx.11624	chr7	+	1262	11	ISM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	4786	0	401	0	3prime_fragment	FALSE	canonical	3	819	junction_1	153.374867563105	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	5969	False	NA	NA	False	NA	NA	NA	127571447	127581204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
tx.11625	chr7	+	299	2	ISM	ENSMUSG00000030795.19	ENSMUST00000121616.9	1102	9	13991	0	1283	0	3prime_fragment	FALSE	canonical	3	1395	junction_1	0	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	6802	False	NA	NA	False	NA	NA	NA	127580670	127581204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_127580728_127580962
tx.11626	chr7	-	755	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	120	2925	120	-993	multi-exon	FALSE	canonical	3	1219	junction_2	45	564	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGGATGTTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	127592919	127591804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127592138_127592286_127592344_127592554
tx.11627	chr7	-	561	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	-59	178	-59	-178	multi-exon	FALSE	canonical	3	110	junction_1	3.5	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTGGCTCTTTGGG	5324	False	NA	NA	False	NA	NA	NA	127805618	127804784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127804985_127805071_127805209_127805394
tx.11628	chr7	+	2677	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	1157	0	1157	0	multi-exon	FALSE	canonical	3	88	junction_1	5.30659966456864	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	NA	False	NA	NA	NA	127837685	127844272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
tx.11629	chr7	+	1002	4	ISM	ENSMUSG00000030781.14	ENSMUST00000118169.8	2277	14	5088	0	190	0	3prime_fragment	FALSE	canonical	1	3	junction_1	2.82842712474619	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTGTGGCTGAAACAT	NA	False	NA	NA	False	NA	NA	NA	127869935	127871602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_127870125_127870206_127870423_127870920_127871051_127871135
tx.11630	chr7	-	2571	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	56	0	-5	0	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTTCATACTGCAGGC	1162	False	NA	NA	False	NA	NA	NA	127897286	127870550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
tx.11631	chr7	+	500	3	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGACTCCTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	127902009	127902928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_+_127902082_127902265_127902341_127902575
tx.11632	chr7	-	689	3	FSM	ENSMUSG00000030844.12	ENSMUST00000134144.2	458	3	33	-264	33	0	multi-exon	FALSE	canonical	1	3	junction_2	8	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTAGTCATTTCTACTT	9784	False	NA	NA	False	NA	NA	NA	127995376	127975344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_127975767_127990687_127990832_127995253
tx.11633	chr7	-	521	2	ISM	ENSMUSG00000030846.16	ENSMUST00000133444.8	953	6	958	71	958	0	3prime_fragment	FALSE	canonical	3	264	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	NA	NA	NA	128045671	128044003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_128044384_128045530
tx.11634	chr7	-	1862	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-282	0	15	0	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	NA	NA	NA	128063361	128044003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
tx.11635	chr7	+	2594	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	-32	0	-32	0	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	7110	False	NA	NA	False	NA	NA	NA	128125307	128148705	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
tx.11636	chr7	+	1483	9	ISM	ENSMUSG00000042105.19	ENSMUST00000098007.11	1906	10	21	1503	-11	1343	5prime_fragment	TRUE	canonical	3	45	junction_6	9.36416040016402	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTCTCGAATCAGCTG	7165	False	NA	NA	False	NA	NA	NA	128213072	128271843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654
tx.11637	chr7	+	4485	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	35.0779561862444	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTTGAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	129193651	129237462	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
tx.11638	chr7	-	2517	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	31	2187	-19	665	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTTTGTTCTATTTCT	NA	False	NA	NA	False	NA	NA	NA	130121279	129995409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
tx.11639	chr7	-	1804	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	-14	2895	-14	-43	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAGCCCTTTAATTGG	NA	False	NA	NA	False	NA	NA	NA	130121274	129996117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
tx.1164	chr10	-	3408	2	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1014	1073	intron_retention	FALSE	canonical	3	31	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATAGGCGTTTTTGACTG	8445	False	NA	NA	False	NA	NA	NA	84390216	84382207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_84385495_84390095
tx.11640	chr7	-	1116	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	319	0	319	0	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	130148792	130134255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
tx.11641	chr7	-	2235	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	40	4498	-9	468	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGATTACGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	130964448	130944446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
tx.11642	chr7	+	1120	6	FSM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	15	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	32.2713495224479	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	NA	False	NA	NA	NA	130972884	130989568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130989346
tx.11643	chr7	+	825	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	59.6547357717726	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	NA	False	NA	NA	NA	130972884	130989568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130989346
tx.11644	chr7	-	4412	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	21	-3	-3	3	multi-exon	TRUE	canonical	3	63	junction_1	6.97614984548545	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTTTTTTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	131012229	130990377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
tx.11645	chr7	+	3298	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	45	2738	45	-3	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGAATTCTCCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	131012374	131047935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
tx.11646	chr7	+	1345	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	158	715	0	13	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTGTTTGTAAACATT	NA	False	NA	NA	False	NA	NA	NA	131162108	131172906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
tx.11647	chr7	+	2041	7	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	432	0	45	0	3prime_fragment	FALSE	canonical	3	1325	junction_5	56.2840020688729	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCAGGTGTGTTACCT	NA	False	NA	NA	False	NA	NA	NA	131162382	131173621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
tx.11648	chr7	+	1098	2	ISM	ENSMUSG00000066979.7	ENSMUST00000209131.2	4015	6	8231	0	7928	0	3prime_fragment	FALSE	canonical	3	1412	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCAGGTGTGTTACCT	NA	False	NA	NA	False	NA	NA	NA	131170366	131173621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_131170451_131172607
tx.11649	chr7	-	2132	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	20	0	20	0	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	172	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGATGTGAATCTATTTA	NA	False	NA	NA	False	NA	NA	NA	132178107	132159206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
tx.1165	chr10	+	4878	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	96	1	95	-1	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTCTGAGAGGTGATG	NA	False	NA	NA	False	NA	NA	NA	84458251	84563041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
tx.11650	chr7	+	1608	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	4	0	4	0	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGCCTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	132212371	132308149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
tx.11651	chr7	-	974	4	FSM	ENSMUSG00000030960.17	ENSMUST00000120425.8	573	4	-25	-376	-2	224	multi-exon	FALSE	canonical	3	11	junction_1	170.763644322269	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTAGAGATAATGTCT	NA	False	NA	NA	False	NA	NA	NA	132454370	132428961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_132429612_132452323_132452439_132453154_132453221_132454227
tx.11652	chr7	-	1073	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	34	0	0	0	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	132454368	132429185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
tx.11653	chr7	-	1414	3	FSM	ENSMUSG00000030960.17	ENSMUST00000154914.2	811	3	2	-605	2	605	multi-exon	FALSE	canonical	3	351	junction_1	20.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTTACTGGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	132454366	132451229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_132452439_132453154_132453221_132454227
tx.11654	chr7	+	2877	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	15	0	3	0	multi-exon	FALSE	canonical	3	195	junction_8	19.6273883896967	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATATTTTAGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	132460968	132486840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
tx.11656	chr7	-	2277	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	266.085625316363	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAACAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	132724861	132589312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724715
tx.11658	chr7	-	1847	8	ISM	ENSMUSG00000030970.17	ENSMUST00000169570.8	3604	9	15902	27	15902	16	3prime_fragment	FALSE	canonical	3	751	junction_6	77.2758113539299	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132601075	132589333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919
tx.11659	chr7	-	2216	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	142	-37	-41	0	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAACAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	132724954	132589312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
tx.1166	chr10	-	1976	2	FSM	ENSMUSG00000050035.8	ENSMUST00000059383.8	3402	2	-12	1438	-12	256	multi-exon	FALSE	canonical	3	8	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAATTCTCAGCTGACC	NA	False	NA	NA	False	NA	NA	NA	84938371	84933588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_84935353_84938159
tx.11660	chr7	-	3313	3	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCTCTGTCAGATGTG	7789	False	NA	NA	False	NA	NA	NA	133178640	133169051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_133171824_133172127_133172464_133178435
tx.11662	chr7	-	1570	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	202	-10	-10	1	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCTGAGTATGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	133310808	133288083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
tx.11663	chr7	+	1236	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	8	0	-7	0	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	859	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAGTGTTCATGTCC	1315	False	NA	-81	True	NA	NA	NA	133311069	133322874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
tx.11664	chr7	-	2878	12	FSM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	124	-4	124	0	multi-exon	FALSE	canonical	3	66	junction_11	95.5958261822716	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	133361874	133322670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749
tx.11665	chr7	-	2870	11	ISM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	239	-4	-201	0	intron_retention	FALSE	canonical	3	326	junction_7	30.1875802276367	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	133361759	133322670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128
tx.11666	chr7	-	2939	12	FSM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	16	0	16	0	multi-exon	FALSE	canonical	3	247	junction_11	48.5725154403017	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	133378516	133322670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
tx.11667	chr7	+	2586	21	FSM	ENSMUSG00000058325.7	ENSMUST00000211593.2	2589	21	-4	7	-4	-4	multi-exon	FALSE	canonical	3	101	junction_11	23.1652217774836	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAATGGATGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	134272411	134384908	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475
tx.11668	chr7	+	1001	6	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-28	-2078	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	98.1150345258055	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGATGTGGCTGCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	136496314	136729917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_136496417_136521584_136521742_136552996_136553134_136687677_136687839_136723217_136723358_136729613
tx.11669	chr7	+	847	5	FSM	ENSMUSG00000054612.5	ENSMUST00000081510.4	2894	5	-28	2075	-28	-2075	multi-exon	FALSE	canonical	3	172	junction_1	21.7887585695009	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGCTGCCCTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	136496314	136729920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_136496417_136552996_136553134_136687677_136687839_136723217_136723358_136729613
tx.1167	chr10	-	1552	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	7	8	7	-8	multi-exon	FALSE	canonical	3	41	junction_2	4.5	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGAACTATTATTCCAA	NA	False	NA	NA	False	NA	NA	NA	84963884	84955304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_84956679_84962231_84962351_84963825
tx.11670	chr7	-	1123	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	6	-3	0	3	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	137012485	136977299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
tx.11671	chr7	-	1286	5	FSM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	-21	-566	0	3	multi-exon	FALSE	canonical	3	25	junction_1	88.1373218336024	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	137012485	136977299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_136978081_136978683_136978847_136989099_136989163_136989268_136989431_137012368
tx.11672	chr7	-	1306	5	NNC	ENSMUSG00000040139.15	novel	699	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	92.2506775042872	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTCTGGCTTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	137012485	136977301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_136978081_136978661_136978847_136989099_136989163_136989268_136989431_137012368
tx.11673	chr7	+	1245	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	33	407	-8	-407	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	1576	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	NA	False	NA	NA	NA	137039375	137069916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
tx.11674	chr7	-	1528	2	FSM	ENSMUSG00000041775.8	ENSMUST00000075667.5	1502	2	-16	-10	-3	0	multi-exon	FALSE	canonical	3	55	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAACTTGTTTTGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	138448005	138437551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_138438760_138447685
tx.11675	chr7	+	1946	8	FSM	ENSMUSG00000041769.14	ENSMUST00000155672.8	1938	8	-5	-3	3	0	multi-exon	FALSE	canonical	3	482	junction_3	92.005767343628	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	138448318	138484786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
tx.11676	chr7	+	1778	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	229.285423774726	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	138448320	138484786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
tx.11677	chr7	+	1816	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	223.507658636987	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	138448321	138484786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474729_138474781_138475848_138476014_138478184_138478447_138483937
tx.11678	chr7	+	1648	7	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	298.436713931484	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	138448323	138484786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_138448434_138470138_138470237_138472118_138472232_138474729_138474781_138475848_138476014_138478184_138478447_138483937
tx.11679	chr7	-	1628	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	128	0	-128	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	NA	False	NA	NA	NA	138511235	138492692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
tx.1168	chr10	-	1388	7	ISM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	38629	0	-1994	0	3prime_fragment	FALSE	canonical	3	240	junction_6	13.29995822884	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	84982299	84967563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207
tx.11681	chr7	-	2814	2	ISM	ENSMUSG00000041309.18	ENSMUST00000097974.9	1907	4	1221	-1856	1214	1856	3prime_fragment	FALSE	canonical	3	11	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTTGCTTGGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	139161492	139157435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_139159538_139160780
tx.11682	chr7	+	1197	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	30	0	30	0	multi-exon	FALSE	canonical	3	805	junction_1	0	356	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTGAATGAATTCGGAC	NA	False	NA	NA	False	NA	NA	NA	139523731	139525025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_139524343_139524439
tx.11683	chr7	-	3068	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-67	-41	-1	0	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616246	139575867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
tx.11684	chr7	-	2866	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	287	-93	8	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616295	139575867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
tx.11685	chr7	+	1017	5	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	-4	4	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	147.438758472798	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCTTCTTCATGTGTT	NA	False	NA	NA	False	NA	NA	NA	139616313	139620519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_139616520_139617132_139617335_139617428_139617554_139619238_139619359_139620155
tx.11686	chr7	+	1023	6	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_4	120.382058463876	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTCTTCTTCATGT	NA	False	NA	NA	False	NA	NA	NA	139616319	139620516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617495_139619238_139619359_139620155
tx.11687	chr7	+	1075	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	1	0	1	0	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	NA	False	NA	NA	NA	139616325	139620515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
tx.11688	chr7	-	838	2	ISM	ENSMUSG00000025468.16	ENSMUST00000211044.2	1029	6	11227	4	11227	2	3prime_fragment	FALSE	canonical	3	34	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTCGTGGTTTCTCTT	9266	False	NA	NA	False	NA	NA	NA	139650913	139649797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_139649947_139650224
tx.11689	chr7	+	643	5	FSM	ENSMUSG00000025467.9	ENSMUST00000026540.9	620	5	-27	4	-27	-4	multi-exon	FALSE	canonical	3	31	junction_4	1.08972473588517	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGGAATGCGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	139673280	139677109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_139673382_139674944_139675012_139676062_139676116_139676586_139676694_139676794
tx.1169	chr10	+	3632	13	ISM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	26483	2	-4631	1	3prime_fragment	TRUE	canonical	3	37	junction_10	5.1713688280334	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGCATCCTCTTTATG	NA	False	NA	NA	False	NA	NA	NA	85460747	85496154	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
tx.11690	chr7	-	833	5	ISM	ENSMUSG00000025466.20	ENSMUST00000120034.8	680	6	-14	2700	-11	0	5prime_fragment	FALSE	canonical	3	247	junction_4	96.9278081873308	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1495	False	NA	NA	False	NA	NA	NA	139682330	139679382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
tx.11691	chr7	-	648	6	FSM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	37	0	-1	0	multi-exon	FALSE	canonical	3	247	junction_5	86.8506764510214	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1508	False	NA	NA	False	NA	NA	NA	139682317	139679382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
tx.11692	chr7	-	1502	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	55	0	1	0	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	649	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	False	NA	NA	False	NA	NA	NA	139696334	139685622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
tx.11693	chr7	+	1756	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	9	2890	9	0	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	NA	False	NA	NA	NA	139705578	139714247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
tx.11694	chr7	+	1381	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-39	168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	150.393783116191	118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	139717522	139730528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
tx.11695	chr7	-	1474	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	-14	0	-14	0	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	140367779	140357141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
tx.11696	chr7	-	2600	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	-43	1294	3	-1294	multi-exon	FALSE	canonical	3	50	junction_1	4	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTAAGCATGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	140402088	140390895	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140393228_140398500_140398628_140401947
tx.11697	chr7	+	701	4	FSM	ENSMUSG00000025481.13	ENSMUST00000106050.8	719	4	102	-84	102	5	multi-exon	FALSE	canonical	3	242	junction_1	5.43650214343336	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTATCATTGGGAT	NA	False	NA	NA	False	NA	NA	NA	140415032	140417884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140415172_140415524_140415665_140416659_140416796_140417598
tx.11698	chr7	+	900	3	FSM	ENSMUSG00000025481.13	ENSMUST00000026554.11	890	3	-5	-5	2	5	multi-exon	FALSE	canonical	3	251	junction_1	2	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTATCATTGGGAT	NA	False	NA	NA	False	NA	NA	NA	140415186	140417884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140415665_140416659_140416796_140417598
tx.11699	chr7	-	1463	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	792	13	0	-13	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGTTCCGTGCCCGTC	NA	False	NA	NA	False	NA	NA	NA	140436230	140433319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
tx.117	chr1	-	1140	6	NIC	ENSMUSG00000026049.12	novel	935	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	156.042814637522	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	NA	False	NA	NA	NA	44141599	44125772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139096_44141487
tx.1170	chr10	+	2565	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	10	-3	10	3	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTCACTTTGACTTCA	NA	False	NA	NA	False	NA	NA	NA	85707704	85724963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
tx.11700	chr7	+	2364	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	455	587	-10	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	NA	False	NA	NA	NA	140437324	140443056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
tx.11701	chr7	-	1305	6	ISM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	3731	-3	9	-1	3prime_fragment	FALSE	canonical	3	226	junction_4	7.05974503788912	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCCTGTCTCTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	140458051	140443579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869
tx.11702	chr7	-	1411	7	FSM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	8	-3	8	-1	multi-exon	FALSE	canonical	3	125	junction_6	42.0135560133737	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCCTGTCTCTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	140461774	140443579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
tx.11703	chr7	-	1332	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	76.8188706561668	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCCTGTCTCTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	140461789	140443579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140457965_140461675
tx.11704	chr7	-	1436	7	FSM	ENSMUSG00000025486.18	ENSMUST00000026559.14	1461	7	28	-3	8	-1	multi-exon	FALSE	canonical	3	24	junction_6	79.4187215543875	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCCTGTCTCTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	140462194	140443579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140462070
tx.11705	chr7	+	1559	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	430	0	-16	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	394	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	140462310	140478555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
tx.11706	chr7	+	946	7	ISM	ENSMUSG00000025487.16	ENSMUST00000166889.8	1096	12	6976	-354	48	0	3prime_fragment	FALSE	canonical	3	1065	junction_4	65.812021866998	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	140469360	140478555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
tx.11707	chr7	+	538	2	ISM	ENSMUSG00000025487.16	ENSMUST00000163610.9	1382	12	15173	-30	3122	0	3prime_fragment	FALSE	canonical	3	1248	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	140477549	140478555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_140477638_140478105
tx.11708	chr7	+	2992	14	FSM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	-15	4	0	2	multi-exon	FALSE	canonical	3	42	junction_1	11.3032434995212	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGTGATGGATT	NA	False	NA	NA	False	NA	NA	NA	140521478	140527573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
tx.11709	chr7	-	645	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	10	0	10	0	multi-exon	FALSE	canonical	3	9574	junction_1	0	1791	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	140535890	140534749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140535087_140535582
tx.1171	chr10	-	1983	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	27	-1	27	1	multi-exon	FALSE	canonical	3	1317	junction_1	96.7988457003782	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTCTCTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	85793660	85774499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
tx.11710	chr7	+	656	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	79	1	79	-1	multi-exon	FALSE	canonical	3	1139	junction_1	0	283	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTAGTCCTGTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	140548031	140549737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140548352_140549401
tx.11711	chr7	+	1259	7	NNC	ENSMUSG00000055629.6	novel	476	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	76.3728063878469	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	140650162	140652313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_140650225_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
tx.11712	chr7	+	1300	6	ISM	ENSMUSG00000055629.6	ENSMUST00000209546.2	3076	16	5814	0	33	0	3prime_fragment	FALSE	canonical	3	186	junction_1	17.8706463229509	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	140650220	140652313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
tx.11713	chr7	+	1438	7	NIC	ENSMUSG00000054065.13	novel	2848	13	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.5255862921022	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCTCCGTGTGTTTC	587	False	NA	NA	False	NA	NA	NA	140668031	140670423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_140668298_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
tx.11714	chr7	+	1446	7	FSM	ENSMUSG00000054065.13	ENSMUST00000160403.8	1425	7	-18	-3	-18	0	multi-exon	FALSE	canonical	3	51	junction_3	7.83156008298049	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCTCCGTGTGTTTC	596	False	NA	NA	False	NA	NA	NA	140668040	140670423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
tx.11715	chr7	-	1772	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-102	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_9	19.9616917069288	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	140676754	140671087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
tx.11716	chr7	-	2099	9	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-127	1	intron_retention	TRUE	canonical	3	90	junction_8	21.1527185014125	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCTTATTTCTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	140676779	140671086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
tx.11717	chr7	-	1673	10	FSM	ENSMUSG00000025494.9	ENSMUST00000209294.2	1612	10	-59	-2	-29	0	multi-exon	FALSE	canonical	3	23	junction_9	39.3474550920669	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	140680514	140671087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
tx.11718	chr7	-	3018	24	FSM	ENSMUSG00000054662.9	ENSMUST00000067836.9	3019	24	-5	6	-5	0	multi-exon	FALSE	canonical	3	82	junction_10	30.0592986723404	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	NA	False	NA	NA	NA	140697724	140681130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
tx.11719	chr7	-	1394	6	ISM	ENSMUSG00000054662.9	ENSMUST00000211515.2	3112	13	4462	-13	-151	0	3prime_fragment	FALSE	canonical	3	149	junction_2	7.96492310069595	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGATCCAGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	140684125	140681124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904
tx.1172	chr10	+	1910	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-66	3544	-66	6	multi-exon	TRUE	canonical	3	208	junction_3	24.7878498462452	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	85857769	85884193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
tx.11720	chr7	+	2141	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	35	1448	20	556	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGCTGCCCTTTGCC	6845	False	NA	NA	False	NA	NA	NA	140711233	140736071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
tx.11721	chr7	-	1655	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	3	0	3	0	multi-exon	FALSE	canonical	3	224	junction_9	176.376561249007	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTCCTTGTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	140748599	140740238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
tx.11722	chr7	-	1604	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	489	-2	-48	0	multi-exon	FALSE	canonical	3	441	junction_9	110.454616120026	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTCCTTGTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	140748650	140740238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
tx.11723	chr7	-	1652	10	FSM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	6	-2	6	0	multi-exon	FALSE	canonical	3	317	junction_9	147.871899850621	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTCCTTGTCGTTCTT	7998	False	NA	NA	False	NA	NA	NA	140752764	140740238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
tx.11724	chr7	-	709	2	ISM	ENSMUSG00000025499.19	ENSMUST00000124971.2	1122	5	1589	-8	-316	4	3prime_fragment	FALSE	canonical	3	437	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGCTGGAAGTAGGAG	975	False	NA	NA	False	NA	NA	NA	140772206	140770834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_140771381_140772043
tx.11729	chr7	+	1525	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	0	0	0	0	multi-exon	TRUE	canonical	3	288	junction_1	23.1395764870492	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	140795772	140798571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
tx.1173	chr10	+	1883	9	FSM	ENSMUSG00000001786.15	ENSMUST00000117597.2	1799	9	-76	-8	-68	8	multi-exon	FALSE	canonical	3	31	junction_1	75.1232320923428	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTTTTTTTAAGGATG	NA	False	NA	NA	False	NA	NA	NA	85857984	85884195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_85858195_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
tx.11731	chr7	+	1998	5	ISM	ENSMUSG00000038611.18	ENSMUST00000122143.8	4864	13	16167	-155	476	0	3prime_fragment	FALSE	canonical	3	188	junction_1	45.7083143421413	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	3998	False	NA	NA	False	NA	NA	NA	140839578	140842663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
tx.11733	chr7	+	1256	8	FSM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	-27	0	-27	0	multi-exon	FALSE	canonical	3	3267	junction_3	222.11993450864	1085	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	3813	False	NA	NA	False	NA	NA	NA	140972084	140982881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
tx.11734	chr7	-	1470	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	39	389	-7	1	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTTGTTTT	5476	False	NA	NA	False	NA	NA	NA	140994010	140988095	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
tx.11736	chr7	-	2546	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	260	5	-1	0	multi-exon	TRUE	canonical	3	72	junction_9	20.9708792800344	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	467	False	NA	NA	False	NA	NA	NA	141017545	141009661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
tx.11737	chr7	+	451	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	278	235	17	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	7425	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2395	False	NA	NA	False	NA	NA	NA	141027560	141031263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
tx.11738	chr7	+	1997	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	-23	651	-23	0	multi-exon	FALSE	canonical	3	56	junction_3	8.3132048573339	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTCACTTCTGCAT	9922	False	NA	NA	False	NA	NA	NA	141035087	141040005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
tx.11739	chr7	+	1136	4	ISM	ENSMUSG00000025509.16	ENSMUST00000164924.8	1957	10	3362	4	1573	-4	3prime_fragment	FALSE	canonical	3	74	junction_1	2.44948974278318	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTCTGCATGTTACCC	NA	False	NA	NA	False	NA	NA	NA	141038503	141040012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_141038673_141038757_141038891_141039079_141039203_141039301
tx.1174	chr10	+	1729	9	FSM	ENSMUSG00000001786.15	ENSMUST00000120344.8	1655	9	-68	-6	-68	6	multi-exon	FALSE	canonical	3	21	junction_1	78.2747564672034	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	85857984	85884193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_85858195_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
tx.11740	chr7	+	1078	4	ISM	ENSMUSG00000048200.13	ENSMUST00000053670.12	1698	10	3992	0	-8	0	3prime_fragment	FALSE	canonical	3	11	junction_3	1.63299316185545	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTCTTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	141044998	141046526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_141045270_141045431_141045599_141045678_141045751_141045958
tx.11741	chr7	+	1756	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	-30	-18	0	8	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGCTGACAGGACCT	NA	False	NA	NA	False	NA	NA	NA	141047304	141051394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
tx.11742	chr7	+	1865	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	8	-8	8	8	multi-exon	FALSE	canonical	3	98	junction_1	68.1968938187848	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGCTGACAGGACCT	NA	False	NA	NA	False	NA	NA	NA	141047313	141051394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
tx.11743	chr7	-	425	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	-27	1252	-27	-1252	multi-exon	FALSE	canonical	3	1072	junction_1	0	272	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTCCATGTCCATGTCT	7973	False	NA	NA	False	NA	NA	NA	141055072	141053024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_141053318_141054940
tx.11744	chr7	-	467	3	NNC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	-215	-1252	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	528	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTCCATGTCCATGTCT	7785	False	NA	NA	False	NA	NA	NA	141055260	141053024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_141053318_141054940_141055056_141055201
tx.11745	chr7	+	1424	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	39	3	39	3	multi-exon	FALSE	canonical	3	56	junction_1	68.6787850082111	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGAGGAAGTTCTTTCA	3530	False	NA	NA	False	NA	NA	NA	141055191	141073337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
tx.11746	chr7	+	1642	7	FSM	ENSMUSG00000025511.16	ENSMUST00000239217.2	1157	7	-16	-469	-16	1	multi-exon	FALSE	canonical	3	206	junction_2	25.1241362482817	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACTGAGGAAGTTCTTT	638	False	NA	NA	False	NA	NA	NA	141061960	141073335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
tx.11747	chr7	-	1728	11	ISM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	9548	2224	2666	-11	3prime_fragment	FALSE	canonical	3	185	junction_5	14.1636859609355	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGAAGAATGGCTGACC	7633	False	NA	NA	False	NA	NA	NA	141110181	141075272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062
tx.11748	chr7	-	1611	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-12	2583	4	-322	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACAGGCCCTGCCTTC	NA	False	NA	NA	False	NA	NA	NA	141119741	141075631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
tx.11749	chr7	+	1539	5	FSM	ENSMUSG00000002957.12	ENSMUST00000201320.2	1549	5	26	-16	26	16	multi-exon	FALSE	canonical	3	675	junction_3	22.2190796389049	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACACAGCTCAAAAAGATAA	9657	False	NA	NA	False	NA	NA	NA	141142146	141183085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145
tx.1175	chr10	+	1627	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	0	-5	0	5	multi-exon	FALSE	canonical	3	71	junction_1	95.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTGTATGAGTGTATT	NA	False	NA	NA	False	NA	NA	NA	86521388	86525823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_86521473_86521743_86521861_86524397
tx.11750	chr7	+	3218	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	68	1360	33	-1360	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGGAAATTTTGTTC	9664	False	NA	NA	False	NA	NA	NA	141142153	141211564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
tx.11751	chr7	-	3716	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	72	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	2769	False	NA	NA	False	NA	NA	NA	141456152	141435319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
tx.11752	chr7	-	1499	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	6	-15	5	0	multi-exon	FALSE	canonical	3	149	junction_3	10.8857705285386	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCCATTTCATATTATT	NA	False	NA	NA	False	NA	NA	NA	141614796	141562271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
tx.11753	chr7	-	1450	5	FSM	ENSMUSG00000025147.8	ENSMUST00000210684.2	958	5	6	-498	5	0	multi-exon	FALSE	canonical	2	4	junction_3	69.7006994226026	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCCATTTCATATTATT	NA	False	NA	NA	False	NA	NA	NA	141614796	141562271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570130_141570243_141614721
tx.11754	chr7	-	1981	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	141	5	-40	1	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	678	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTATTGGTGTGCTCTGT	8825	False	NA	NA	False	NA	NA	NA	141941634	141929652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
tx.11755	chr7	+	572	5	FSM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	120	0	-29	0	multi-exon	FALSE	canonical	3	973	junction_1	229.96847610053	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGACACTTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	142086868	142094484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094255
tx.11756	chr7	-	1643	3	FSM	ENSMUSG00000009248.7	ENSMUST00000009392.6	1605	3	-34	-4	-34	4	multi-exon	FALSE	canonical	3	20	junction_1	4	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGTGCCTTGTACCTT	NA	False	NA	NA	False	NA	NA	NA	142523035	142520561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_142521077_142521636_142522437_142522707
tx.11757	chr7	-	1025	4	FSM	ENSMUSG00000059277.13	ENSMUST00000155952.8	2219	4	240	954	-29	-291	multi-exon	FALSE	canonical	2	6	junction_1	1.69967317119759	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTCTCCAAAGAACCC	NA	False	NA	NA	False	NA	NA	NA	142607183	142587311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_142587664_142591017_142591119_142598231_142598394_142606773
tx.11758	chr7	+	1484	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	45	4	-10	-4	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	491	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTGCCAGACCTCTTC	NA	False	NA	NA	False	NA	NA	NA	142606520	142621667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
tx.11759	chr7	+	1354	3	FSM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	165	0	-10	0	multi-exon	FALSE	canonical	3	158	junction_2	1	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	NA	False	NA	NA	NA	142623150	142624830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_142623251_142623491_142623588_142623672
tx.11760	chr7	+	1305	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	65	-6	9	0	multi-exon	FALSE	canonical	3	124	junction_2	18	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	NA	False	NA	NA	NA	142623169	142624830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_142623251_142623491_142623558_142623672
tx.11761	chr7	-	743	2	FSM	ENSMUSG00000010760.6	ENSMUST00000010904.5	757	2	11	3	11	-3	multi-exon	FALSE	canonical	3	98	junction_1	0	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGTGTGGTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	143056267	143055284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_143055554_143055793
tx.11762	chr7	-	2290	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	-8	3	4	1	multi-exon	FALSE	canonical	3	502	junction_2	192.287354411741	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATTGGTTTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	143102837	143067318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
tx.11763	chr7	-	2255	15	FSM	ENSMUSG00000059119.10	ENSMUST00000208190.2	2259	15	6	-2	4	-2	multi-exon	FALSE	canonical	3	471	junction_1	167.71624785905	202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTGGTTTTTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	143102837	143067317	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
tx.11764	chr7	-	2465	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	-1	-2	-1	1	multi-exon	TRUE	canonical	3	1234	junction_21	93.4109735380392	161	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	NA	False	NA	NA	NA	143153794	143111441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
tx.11765	chr7	-	1553	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	-3	2620	-3	-703	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGTTTTGTCCTCAC	NA	False	NA	NA	False	NA	NA	NA	143203401	143191164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
tx.11766	chr7	-	682	7	FSM	ENSMUSG00000010751.16	ENSMUST00000146692.8	2298	7	8	1608	-1	925	multi-exon	FALSE	canonical	3	15	junction_2	62.0232931154811	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGCTTCCTTTTATTGCT	NA	False	NA	NA	False	NA	NA	NA	143203390	143192069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_143192174_143192981_143193027_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
tx.11767	chr7	-	2092	5	NIC	ENSMUSG00000010751.16	novel	564	6	NA	NA	6	922	intron_retention	FALSE	canonical	3	105	junction_3	24.963723680573	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTAGCTTCCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	143203383	143192072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
tx.11768	chr7	-	2634	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	7	0	7	0	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTATTGATGTGTACG	NA	False	NA	NA	False	NA	NA	NA	143376571	143349320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
tx.11769	chr7	+	2367	8	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	588	0	-20	0	3prime_fragment	TRUE	canonical	3	394	junction_5	16.39686381163	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	143383950	143402147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
tx.1177	chr10	+	1725	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	-55	-5	31	5	multi-exon	FALSE	canonical	3	53	junction_1	104.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTGTATGAGTGTATT	NA	False	NA	NA	False	NA	NA	NA	86521419	86525823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_86521602_86521743_86521861_86524397
tx.11770	chr7	-	3022	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	266	-2	2	0	multi-exon	FALSE	canonical	0	0	junction_7	258.149054338875	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGATCTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	144024480	143989469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
tx.11771	chr7	-	2909	17	FSM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	4	0	4	0	multi-exon	TRUE	canonical	3	340	junction_7	190.956545694956	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGATCTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	144024478	143989469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
tx.11772	chr7	-	1507	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	22	2374	22	-2374	multi-exon	FALSE	canonical	3	26	junction_1	0	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTGGGTGTGATAA	NA	False	NA	NA	False	NA	NA	NA	144136178	144133428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_144134598_144135840
tx.11773	chr7	+	2266	3	FSM	ENSMUSG00000031074.15	ENSMUST00000105898.2	2299	3	39	-6	39	6	multi-exon	FALSE	canonical	3	54	junction_2	3.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATATGGTTGGTGATGTTT	NA	False	NA	NA	False	NA	NA	NA	144392370	144398179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_144392665_144394407_144394512_144396311
tx.11774	chr7	+	2728	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	304	-2	304	2	multi-exon	FALSE	canonical	3	677	junction_2	22.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTGTCTGCTTTGTC	8306	False	NA	NA	False	NA	NA	NA	144415426	144418982	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_144415570_144415968_144416073_144416501
tx.11775	chr7	+	1984	5	FSM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	28	3	-8	-3	multi-exon	FALSE	canonical	3	87	junction_3	3.69966214673719	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTAGTCTGTCTGGGATC	NA	False	NA	NA	False	NA	NA	NA	144468899	144474868	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960_144473079_144473346
tx.11776	chr7	+	1813	4	FSM	ENSMUSG00000031072.15	ENSMUST00000147460.2	807	4	299	-1305	299	0	multi-exon	FALSE	canonical	3	87	junction_2	2.44948974278318	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGTCTGGGATCATT	NA	False	NA	NA	False	NA	NA	NA	144470171	144474871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_144470271_144471346_144471418_144472960_144473079_144473346
tx.11777	chr7	-	1853	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	-12	1899	-12	1368	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTTGTAGCTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	144493618	144485566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
tx.11778	chr8	+	207	2	ISM	ENSMUSG00000004568.14	ENSMUST00000130587.2	354	3	-67	1813	0	-1813	5prime_fragment	FALSE	canonical	3	218	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCCCAGCTGGATCTGG	NA	False	NA	NA	False	NA	NA	NA	3443005	3477458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_3443103_3477348
tx.11779	chr8	-	1127	5	FSM	ENSMUSG00000069633.13	ENSMUST00000004686.13	2870	5	32	1711	-3	-1708	multi-exon	FALSE	canonical	3	21	junction_1	4.14578098794425	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTGTGCATGAGGTGA	NA	False	NA	NA	False	NA	NA	NA	3517648	3508815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517571
tx.1178	chr10	-	2779	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	46	0	46	0	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	NA	False	NA	NA	NA	86541327	86526703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
tx.11780	chr8	+	2022	14	FSM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	51	-8	4	8	multi-exon	FALSE	canonical	3	278	junction_8	29.619280463035	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTTGTAACAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	3550507	3565240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
tx.11781	chr8	+	1021	5	ISM	ENSMUSG00000004565.16	ENSMUST00000207941.2	4263	31	24330	-1	129	1	3prime_fragment	FALSE	canonical	3	270	junction_2	13.1624465810882	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGCCTGGTGCTGTCT	3410	False	NA	NA	False	NA	NA	NA	3591203	3594261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
tx.11782	chr8	+	833	2	FSM	ENSMUSG00000065952.14	ENSMUST00000138454.2	637	2	-10	-186	-10	186	multi-exon	FALSE	canonical	3	29	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGCCTCTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	3617979	3623836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_3618097_3623120
tx.11783	chr8	-	2667	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	10	0	-1	0	multi-exon	FALSE	canonical	3	374	junction_12	44.2084358744927	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1021	False	NA	NA	False	NA	NA	NA	3671306	3660086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
tx.11784	chr8	+	326	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	4	863	0	0	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5591	False	NA	NA	False	NA	NA	NA	3671554	3673372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
tx.11785	chr8	+	641	4	NNC	ENSMUSG00000087687.4	novel	363	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	310.762860643861	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5638	False	NA	NA	False	NA	NA	NA	3671601	3673372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_3671974_3672341_3672429_3672592_3672626_3673223
tx.11786	chr8	+	1900	19	FSM	ENSMUSG00000004626.15	ENSMUST00000004745.9	1847	19	-53	0	-35	0	multi-exon	FALSE	canonical	3	69	junction_17	74.555886735479	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4549	False	NA	NA	False	NA	NA	NA	3681116	3692795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
tx.11787	chr8	+	1876	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	183	849	-14	0	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4570	False	NA	NA	False	NA	NA	NA	3681137	3692795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
tx.11788	chr8	+	1362	13	ISM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	3575	849	-886	0	3prime_fragment	FALSE	canonical	3	307	junction_4	30.7146363951926	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	7962	False	NA	NA	False	NA	NA	NA	3684529	3692795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
tx.11789	chr8	-	373	2	FSM	ENSMUSG00000089665.3	ENSMUST00000159364.3	392	2	22	-3	22	3	multi-exon	FALSE	canonical	3	78	junction_1	0	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGTCTTTCTATTAC	NA	False	NA	NA	False	NA	NA	NA	3722340	3721184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_3721397_3722179
tx.1179	chr10	-	3214	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	16	0	intron_retention	FALSE	canonical	3	53	junction_4	10.555093557141	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGGTTTATACTT	NA	False	NA	NA	False	NA	NA	NA	87982779	87927293	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
tx.11790	chr8	+	709	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	211	1626	0	-1291	multi-exon	FALSE	canonical	3	198	junction_1	0	191	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTTGTGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	3726509	3729629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_3726604_3729014
tx.11791	chr8	+	3423	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110998.9	3497	11	70	4	-19	-4	multi-exon	FALSE	canonical	3	271	junction_7	24.9617707705203	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAGTCTGGTGTCCTAAG	NA	False	NA	NA	False	NA	NA	NA	4288809	4297892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
tx.11792	chr8	+	1550	12	FSM	ENSMUSG00000002948.20	ENSMUST00000110999.8	1578	12	19	9	19	-8	multi-exon	FALSE	canonical	2	4	junction_11	89.4399470719399	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	NA	False	NA	NA	NA	4288847	4297888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4295826_4297656
tx.11793	chr8	+	1524	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	12	0	-2	0	multi-exon	FALSE	canonical	3	110	junction_3	11.3880419739304	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGATTCCCCCTTTGAC	NA	False	NA	NA	False	NA	NA	NA	4303091	4306220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
tx.11794	chr8	-	1175	2	FSM	ENSMUSG00000048644.9	ENSMUST00000053252.9	1212	2	28	9	28	-9	multi-exon	FALSE	canonical	3	15	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGCAGATTGCTGAGT	NA	False	NA	NA	False	NA	NA	NA	4309246	4307668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_4308648_4309050
tx.11795	chr8	-	1782	13	FSM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	8	0	8	0	multi-exon	FALSE	canonical	3	458	junction_5	35.4920765805553	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	4325905	4309730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
tx.11796	chr8	+	591	4	NNC	ENSMUSG00000023235.15	novel	362	3	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	5.79271573232759	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGATGTTTGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	4375223	4384812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_4375289_4377756_4377894_4383122_4383231_4384531
tx.11797	chr8	+	1134	7	NIC	ENSMUSG00000023235.15	novel	867	8	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	6.71854812358213	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGACAGTGATGTCTAG	NA	False	NA	NA	False	NA	NA	NA	4375229	4410011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_4375289_4377756_4377851_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
tx.11798	chr8	+	2218	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	253	7004	-1	-446	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCCTGGCATGGTGAC	NA	False	NA	NA	False	NA	NA	NA	4543451	4574676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
tx.11799	chr8	+	1708	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-26	682	-26	169	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGTGGTAAAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	4663140	4679549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
tx.118	chr1	-	2008	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	12	339	12	0	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	False	NA	NA	False	NA	NA	NA	44157956	44146044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
tx.11800	chr8	+	1815	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-15	169	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	42	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGTGGTAAAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	4663151	4679549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
tx.11801	chr8	-	1592	10	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	14611	0	14533	0	3prime_fragment	TRUE	canonical	3	204	junction_9	42.166337284616	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTGAAATGTGGATT	3781	False	NA	NA	False	NA	NA	NA	4814943	4785975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880
tx.11802	chr8	-	2169	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	-13	0	0	0	multi-exon	FALSE	canonical	3	204	junction_9	39.0672497112351	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTGAAATGTGGATT	NA	False	NA	NA	False	NA	NA	NA	4829567	4785975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
tx.11803	chr8	-	1113	2	ISM	ENSMUSG00000040459.12	ENSMUST00000207070.2	525	3	608	-773	608	0	3prime_fragment	FALSE	canonical	3	955	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	8731655	8716575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_8717417_8731383
tx.11804	chr8	-	1102	3	ISM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	6597	1501	-1661	0	3prime_fragment	FALSE	canonical	3	754	junction_2	100.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	NA	False	NA	-45	True	NA	NA	NA	8733924	8716575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_8717417_8731383_8731468_8733747
tx.11805	chr8	-	1367	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	27	-2	27	2	multi-exon	FALSE	canonical	1	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCTTGGGAATGTTTG	NA	False	NA	NA	False	NA	NA	NA	11528683	11503515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_11504527_11528327
tx.11806	chr8	+	1245	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	62	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	41.4568048294447	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	11547567	11563287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
tx.11807	chr8	+	1338	10	FSM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	21	0	2	0	multi-exon	FALSE	canonical	3	77	junction_1	63.9388210675343	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	11547588	11563287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
tx.11808	chr8	-	365	2	ISM	ENSMUSG00000056228.11	ENSMUST00000211172.2	2212	6	5704	5	1507	4	3prime_fragment	FALSE	canonical	3	249	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGGGCCTATGCTGC	NA	False	NA	NA	False	NA	NA	NA	11564682	11564016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_11564192_11564492
tx.11809	chr8	+	1093	2	FSM	ENSMUSG00000045969.9	ENSMUST00000210740.2	1866	2	0	773	0	429	multi-exon	FALSE	canonical	2	8	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGTTGCTGAAGTA	NA	False	NA	NA	False	NA	NA	NA	11606062	11612477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_11606096_11611417
tx.1181	chr10	+	1259	10	FSM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	13	-5	13	5	multi-exon	FALSE	canonical	3	484	junction_1	64.7921653547559	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTATTGTGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	87982866	88014257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
tx.11810	chr8	+	2029	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	785	0	740	0	multi-exon	FALSE	canonical	3	454	junction_1	0	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	NA	False	NA	NA	NA	11606850	11613251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_11607046_11611417
tx.11811	chr8	+	1947	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	25	-1	25	0	multi-exon	FALSE	canonical	3	111	junction_1	0	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	NA	False	NA	NA	NA	11608453	11613251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_11608567_11611417
tx.11812	chr8	-	2445	7	FSM	ENSMUSG00000031508.15	ENSMUST00000211174.2	2447	7	3	-1	3	0	multi-exon	FALSE	canonical	3	27	junction_4	195.638626610959	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	NA	False	NA	NA	NA	11685751	11661582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11685410
tx.11813	chr8	-	2286	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	0	-1	0	0	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	NA	False	NA	NA	NA	11685754	11661582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
tx.11814	chr8	-	776	6	NNC	ENSMUSG00000031509.11	novel	1263	6	NA	NA	-3537	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	15.5897402159241	49	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTGATAGGGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	11716141	11705477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_11705682_11706108_11706190_11711671_11711756_11712589_11712692_11715035_11715099_11715899
tx.11815	chr8	+	3609	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-5	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	85.5342344512295	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTACTTTACTAATAC	NA	False	NA	NA	False	NA	NA	NA	13155734	13197935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
tx.11816	chr8	+	1226	4	ISM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	13425	7	-595	-7	3prime_fragment	FALSE	canonical	3	2592	junction_1	216.043719855239	382	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTGGACGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	13222585	13225331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_13222661_13223626_13223694_13223779_13223951_13224418
tx.11817	chr8	-	1246	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	7	1760	4	0	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTCCATTTTTTCCTA	3644	False	NA	NA	False	NA	NA	NA	13250613	13226921	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
tx.11818	chr8	+	2429	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	-2	-6	-2	0	multi-exon	FALSE	canonical	3	161	junction_2	290.39449030586	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2118	False	NA	NA	False	NA	NA	NA	13388765	13428448	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
tx.11819	chr8	+	2493	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	15	3	-2	-3	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2118	False	NA	NA	False	NA	NA	NA	13388765	13428445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
tx.1182	chr10	+	860	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	43	149	-10	2	multi-exon	FALSE	canonical	3	318	junction_4	34.2377309736236	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	NA	False	NA	NA	NA	88036997	88081871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
tx.11820	chr8	+	2285	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	11	5	10	-5	multi-exon	FALSE	canonical	3	559	junction_10	60.600055957127	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTTTCCAAGCTGGTA	NA	False	NA	NA	False	NA	NA	NA	13807686	13831933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
tx.11821	chr8	+	1566	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	21	470	1	-470	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTTTTTTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	13835635	13848723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
tx.11822	chr8	+	1487	8	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	362	470	332	-470	3prime_fragment	FALSE	canonical	3	271	junction_5	39.9571198733271	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTTTTTTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	13835976	13848723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
tx.11823	chr8	+	807	3	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	9999	470	9969	-470	3prime_fragment	FALSE	canonical	3	317	junction_1	43.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTTTTTTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	13845613	13848723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_13845740_13846458_13846593_13848176
tx.11824	chr8	+	3963	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	50	0	-13	0	multi-exon	FALSE	canonical	3	209	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTACTTAATTT	NA	False	NA	NA	False	NA	NA	NA	13919690	13931639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_13919812_13927797
tx.11825	chr8	-	806	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-6	-7	-6	7	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	486	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTCTGCGTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	13940274	13934786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
tx.11826	chr8	+	2063	11	NIC	ENSMUSG00000038365.9	novel	2035	11	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	39.2779836549688	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTCTGCAACAAT	NA	False	NA	NA	False	NA	NA	NA	13957778	13990522	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13988921_13988949_13989562
tx.11827	chr8	+	2053	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	-41	0	-41	0	multi-exon	FALSE	canonical	3	86	junction_9	11.3572731903828	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTCTGCAACAAT	NA	False	NA	NA	False	NA	NA	NA	13957761	13990522	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
tx.11828	chr8	-	2311	2	FSM	ENSMUSG00000050052.13	ENSMUST00000210414.2	323	2	-30	-1958	20	0	multi-exon	FALSE	canonical	2	12	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4834	False	NA	NA	False	NA	NA	NA	14024723	14002007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_14004136_14024540
tx.11829	chr8	-	2417	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	46	0	12	0	multi-exon	FALSE	canonical	3	271	junction_2	12.5	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4826	False	NA	NA	False	NA	NA	NA	14024731	14002007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_14004136_14005719_14005818_14024540
tx.1183	chr10	+	833	7	FSM	ENSMUSG00000020056.17	ENSMUST00000182183.8	838	7	8	-3	8	2	multi-exon	FALSE	canonical	3	113	junction_4	103.215658803411	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	NA	False	NA	NA	NA	88037021	88081871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081617
tx.11830	chr8	-	2469	4	FSM	ENSMUSG00000050052.13	ENSMUST00000145695.2	373	4	9	-2105	9	0	multi-exon	FALSE	canonical	3	28	junction_3	120.875509880575	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4534	False	NA	NA	False	NA	NA	NA	14025023	14002007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_14004136_14005719_14005818_14024540_14024730_14024969
tx.11831	chr8	-	2439	3	NNC	ENSMUSG00000050052.13	novel	2463	3	NA	NA	12	-2	intron_retention	TRUE	canonical	3	30	junction_2	133	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGTGTATATT	4826	False	NA	NA	False	NA	NA	NA	14024731	14002009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_14004136_14005719_14005818_14024516
tx.11832	chr8	-	1622	6	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	79.7696684210233	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGTGATAAGATTATAA	NA	False	NA	NA	False	NA	NA	NA	14140298	14077556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
tx.11833	chr8	-	1585	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-26	-2	-26	2	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTTGTGATAAGATTAT	NA	False	NA	NA	False	NA	NA	NA	14140327	14077558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
tx.11834	chr8	+	871	2	Genic_Genomic	ENSMUSG00000074461.3	novel	2130	1	NA	NA	27	-1089	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGCTGCTTTCTTCT	4334	False	NA	NA	False	NA	NA	NA	14140487	14141501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr8_+_14140659_14140801
tx.11835	chr8	+	2464	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	-149	2880	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	81.7897032367495	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	NA	False	NA	NA	NA	14938854	14947939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_14939119_14940491_14940624_14944571_14945231_14946530
tx.11836	chr8	+	2332	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	744	3781	-149	2880	multi-exon	FALSE	canonical	3	162	junction_1	24.5	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	NA	False	NA	NA	NA	14938854	14947939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_14939119_14944571_14945231_14946530
tx.11837	chr8	-	710	2	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTTCATGATCATGAA	NA	False	NA	NA	False	NA	NA	NA	18645106	18639118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_-_18639767_18645044
tx.11838	chr8	+	2501	8	FSM	ENSMUSG00000039842.16	ENSMUST00000146819.8	2067	8	-431	-3	-13	3	multi-exon	FALSE	canonical	3	150	junction_4	14.4391757354209	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGACCTGTATACCTTT	NA	False	NA	NA	False	NA	NA	NA	18645166	18682920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531
tx.11839	chr8	+	1247	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	227	9305	225	-1365	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	18896519	18932072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
tx.1184	chr10	+	1169	8	FSM	ENSMUSG00000020059.10	ENSMUST00000125612.2	1169	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.98212288268514	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	NA	False	NA	NA	NA	88295525	88309098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537
tx.11840	chr8	+	2307	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-86	-2749	multi-exon	FALSE	canonical	3	67	junction_3	511.595237956727	19	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTTTAATTATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	19834675	20043139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036156_20039783_20039904_20041811
tx.11841	chr8	+	968	3	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-33	-9404	multi-exon	FALSE	canonical	3	906	junction_2	157	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACCCTAACACATTGAA	NA	False	NA	NA	False	NA	NA	NA	19834728	20036484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr8_+_19834867_20030550_20030757_20035860
tx.11842	chr8	+	1833	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-25	-2995	multi-exon	FALSE	canonical	3	67	junction_3	498.113629104846	42	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATTTATGAAGTTACTG	NA	False	NA	NA	False	NA	NA	NA	19834736	20042893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036156_20039783_20039904_20041811
tx.11843	chr8	+	2086	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-3002	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_3	462.31340830653	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTACAATATTTATGAA	NA	False	NA	NA	False	NA	NA	NA	20016465	20042886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_20016689_20030550_20030924_20035860_20036156_20039783_20039904_20041811
tx.11844	chr8	+	2173	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	9	-2739	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_3	461.298371447375	28	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	20016474	20043149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_20016689_20030550_20030757_20035860_20036156_20039783_20039904_20041811
tx.11845	chr8	+	1206	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	9	335	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_3	385.262104143256	42	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	NA	NA	NA	20016474	20046223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_20016689_20030550_20030757_20035860_20036156_20045732
tx.11846	chr8	+	860	2	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21085	-7168	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCAGTCTTCTCCTCCT	5304	False	NA	NA	False	NA	NA	NA	20555614	20577169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_20555835_20576529
tx.11847	chr8	+	1095	4	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21079	3973	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	4.49691252107735	16	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCTGTTAACAACAGT	5310	False	NA	NA	False	NA	NA	NA	20555620	20588310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_20555835_20576529_20576922_20584150_20584338_20588008
tx.11848	chr8	+	1167	4	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	-93	283	multi-exon	FALSE	canonical	3	112	junction_3	226.010324247957	20	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCATGTGGGCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	20697891	20727549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717493_20727081
tx.11849	chr8	+	392	2	FSM	ENSMUSG00000074442.5	ENSMUST00000098896.5	377	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	20	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGTGTTCACATTCT	NA	False	NA	NA	False	NA	NA	NA	21681614	21682565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_21681802_21682360
tx.1185	chr10	+	979	8	FSM	ENSMUSG00000020059.10	ENSMUST00000123244.8	927	8	-52	0	43	0	multi-exon	FALSE	canonical	3	14	junction_4	38.7767024521326	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	NA	False	NA	NA	NA	88295473	88309098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88303144_88303245_88305407_88305507_88308537_88308643_88308766
tx.11850	chr8	+	442	2	FSM	ENSMUSG00000074446.4	ENSMUST00000098899.4	411	2	-31	0	-31	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGTGTTCACATTCT	NA	False	NA	NA	False	NA	NA	NA	21545031	21546032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_21545269_21545827
tx.11851	chr8	+	1637	3	ISM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	-6	5278	-6	902	5prime_fragment	FALSE	canonical	3	45	junction_2	11	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTACTTGGTCTATGAG	NA	False	NA	NA	False	NA	NA	NA	22550730	22556365	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_22550787_22551901_22552133_22555015
tx.11852	chr8	+	1640	4	FSM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	-15	3335	-15	-1587	multi-exon	FALSE	canonical	3	45	junction_2	9.93310961716756	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCCTAAATTTATTCTT	NA	False	NA	NA	False	NA	NA	NA	22550721	22558308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_22550787_22551901_22552133_22555015_22555948_22557896
tx.11853	chr8	-	765	3	ISM	ENSMUSG00000031478.17	ENSMUST00000151371.2	614	4	964	-403	964	0	3prime_fragment	FALSE	canonical	3	31	junction_2	7	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGTGCTGGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	22621354	22618298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_22618807_22619360_22619485_22621221
tx.11854	chr8	-	2031	16	FSM	ENSMUSG00000031478.17	ENSMUST00000033865.16	2021	16	-10	0	-10	0	multi-exon	FALSE	canonical	3	19	junction_15	6.34350061086148	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGTGCTGGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	22656438	22618298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
tx.11855	chr8	-	898	4	FSM	ENSMUSG00000031478.17	ENSMUST00000151371.2	614	4	116	-400	116	0	multi-exon	FALSE	canonical	3	31	junction_2	5.73488351136175	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCGTGTGTGCTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	22622202	22618301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065
tx.11856	chr8	-	2301	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	8	284	8	1	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTGATTGACTTATTT	NA	False	NA	NA	False	NA	NA	NA	22675827	22658459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
tx.11857	chr8	-	2290	9	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	308	-4	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	79.0283770236995	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTCATTGATTGACT	NA	False	NA	NA	False	NA	NA	NA	22675527	22658464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675405
tx.11858	chr8	+	548	6	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	13	12929	13	-10718	5prime_fragment	FALSE	canonical	3	316	junction_5	36.7564960245125	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAACCGATAAAAAC	NA	False	NA	NA	False	NA	NA	NA	22682837	22697930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872
tx.11859	chr8	+	1323	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	20	2231	20	-20	multi-exon	TRUE	canonical	3	316	junction_5	36.370219952707	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTCTTCATCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	22682844	22708628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
tx.1186	chr10	+	1045	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	95	-1	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	NA	False	NA	NA	NA	88295525	88309098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
tx.11860	chr8	-	3401	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	30	-1	-23	1	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGGTCGTAGTGTC	NA	False	NA	NA	False	NA	NA	NA	22888583	22865565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
tx.11861	chr8	+	1306	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	24	185	-13	-185	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	464	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTGTGTTGATCATTG	NA	False	NA	NA	False	NA	NA	NA	22901400	22919496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
tx.11862	chr8	-	790	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	225	387	198	-387	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGGGTAGTTTGCTC	NA	False	NA	NA	False	NA	NA	NA	22966673	22953017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
tx.11863	chr8	+	2034	4	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	84294	0	22303	0	3prime_fragment	FALSE	canonical	3	566	junction_3	18.9267594221045	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	23051097	23059628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_23051495_23054044_23054231_23055629_23055715_23058262
tx.11864	chr8	-	1359	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	-5	0	-5	0	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	1312	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	23083779	23067101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
tx.11865	chr8	-	1211	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	-12	2	5	-2	multi-exon	FALSE	canonical	3	173	junction_8	16.1157058899497	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTCTTAACAAATGTGT	NA	False	NA	NA	False	NA	NA	NA	23143446	23118143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
tx.11866	chr8	-	640	5	ISM	ENSMUSG00000031536.7	ENSMUST00000210950.2	3354	9	10	9932	-7	-9932	5prime_fragment	FALSE	canonical	3	186	junction_1	11.6270159542335	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGCTTGTAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	23143441	23137159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
tx.11867	chr8	-	3415	9	FSM	ENSMUSG00000031539.7	ENSMUST00000210656.2	3373	9	-43	1	-43	-1	multi-exon	FALSE	canonical	3	19	junction_1	1.96452920568771	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTATGTCTGGTTACTGA	NA	False	NA	NA	False	NA	NA	NA	23295681	23277370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295591
tx.11868	chr8	-	3104	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-54	2468	-54	-2468	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	23698416	23663748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
tx.11869	chr8	-	1349	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	509	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCAAATGTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	23727675	23716631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
tx.1187	chr10	-	1780	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-16	-1118	-16	0	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520893	88510633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
tx.11870	chr8	-	1952	5	FSM	ENSMUSG00000015341.18	ENSMUST00000121783.7	1945	5	0	-7	0	0	multi-exon	TRUE	canonical	3	1223	junction_2	41.2946727799119	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	NA	False	NA	NA	NA	23747037	23731361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689
tx.11871	chr8	-	1791	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	1	0	1	0	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	513	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	NA	False	NA	NA	NA	23747089	23731361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
tx.11872	chr8	+	689	3	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	829	-3024	at_least_one_novel_splicesite	FALSE	canonical	1	52	junction_1	560	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTGGCTCTGTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	23902346	23936624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_23902515_23907345_23907424_23936181
tx.11873	chr8	+	1234	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	47	0	-1	0	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	243	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGAGTATTTC	NA	False	NA	NA	False	NA	NA	NA	25507273	25513276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
tx.11874	chr8	-	2668	7	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	42119	-7	31480	7	3prime_fragment	FALSE	canonical	3	124	junction_6	13.6341075574784	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	6290	False	NA	NA	False	NA	NA	NA	25549882	25530848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849
tx.11875	chr8	-	3264	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	206	-7	-8	7	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	5817	False	NA	NA	False	NA	NA	NA	25591795	25530848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
tx.11876	chr8	-	3420	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	-5	1761	-5	-65	multi-exon	FALSE	canonical	3	27	junction_11	35.6008635794598	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCTTCTTTCTCTTTCT	9683	False	NA	NA	False	NA	NA	NA	25592397	25530920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
tx.11877	chr8	-	3165	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-11	80	combination_of_known_junctions	TRUE	canonical	3	13	junction_10	20.3492014585339	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCTCTGAATTTTGTC	NA	False	NA	NA	False	NA	NA	NA	25730928	25647664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
tx.11878	chr8	+	1456	7	FSM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	27	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	15.9269164205337	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	26210090	26214914	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
tx.11879	chr8	+	538	5	ISM	ENSMUSG00000031570.18	ENSMUST00000133117.8	2099	6	-11	3051	-8	50	5prime_fragment	FALSE	canonical	3	39	junction_2	16.7107749670684	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	26210079	26211863	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688
tx.1188	chr10	-	1684	5	NIC	ENSMUSG00000004359.17	novel	1763	6	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520893	88510633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
tx.11880	chr8	-	2198	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	80	2598	-9	2375	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTAAGAAAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	26275235	26257163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
tx.11881	chr8	-	951	2	FSM	ENSMUSG00000037316.10	ENSMUST00000209948.2	2506	2	-29	1584	-29	-1584	multi-exon	FALSE	canonical	3	405	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAATAAAAATAAAC	NA	False	NA	NA	False	NA	NA	NA	26275255	26266933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_26267556_26274926
tx.11882	chr8	+	1205	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	15	1443	15	408	multi-exon	FALSE	canonical	3	365	junction_2	35.9660333586504	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGAGTTTCTGGTGG	8455	False	NA	NA	False	NA	NA	NA	26275330	26292560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
tx.11883	chr8	-	2328	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	8	1	8	-1	multi-exon	TRUE	canonical	3	3119	junction_12	186.058007680998	2177	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	NA	False	NA	NA	NA	26337714	26306904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
tx.11884	chr8	+	506	2	NNC	ENSMUSG00000031576.17	novel	3536	27	NA	NA	22994	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTTCATTGCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	26424713	26427962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_26424781_26427523
tx.11885	chr8	-	2784	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	8	821	8	-821	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	NA	NA	NA	26484153	26471452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
tx.11886	chr8	-	1640	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	46	244	46	154	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATAGTGTTTGATGTTT	NA	False	NA	NA	False	NA	NA	NA	26505632	26488993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
tx.11887	chr8	-	5024	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	20	7792	20	2439	multi-exon	FALSE	canonical	3	25	junction_6	10.5632744184703	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATCCGTCTATACTTTA	NA	False	NA	NA	False	NA	NA	NA	26609232	26519240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
tx.11888	chr8	+	1497	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	18	2414	-2	132	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTGTTAAAGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	26609413	26631485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
tx.11889	chr8	+	2241	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	54	0	-38	0	multi-exon	FALSE	canonical	3	177	junction_1	13	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCCCTGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	26648222	26654179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_26648550_26650802_26650999_26652461
tx.1189	chr10	+	1779	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	301	0	301	0	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	88567230	88579956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
tx.11890	chr8	+	3909	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	27	902	19	-902	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGTAAAATTTACCAGT	NA	False	NA	NA	False	NA	NA	NA	27513853	27529454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
tx.11891	chr8	+	1991	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	48	1564	5	1	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGATGAGTGAATT	NA	False	NA	NA	False	NA	NA	NA	27532630	27544596	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
tx.11892	chr8	-	1857	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	31	11	5	-11	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCTATTGTATAAAACCA	NA	False	NA	NA	False	NA	NA	NA	27618677	27613402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
tx.11893	chr8	-	2152	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	-1	1066	-1	4	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCAGCGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	27664675	27633051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
tx.11894	chr8	-	1603	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	68	junction_6	20.0831604418561	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTATGTTCTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	27713856	27687484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
tx.11895	chr8	-	1181	3	NIC	ENSMUSG00000031489.16	novel	1864	3	NA	NA	922	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	26.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	NA	False	NA	NA	NA	27717600	27715803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_27716498_27716753_27716925_27717284
tx.11896	chr8	-	1015	3	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	898	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	38.5	22	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	NA	False	NA	NA	NA	27717624	27715803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_27716411_27716753_27716822_27717284
tx.11897	chr8	-	1439	3	FSM	ENSMUSG00000031489.16	ENSMUST00000121838.2	1864	3	650	-225	561	0	multi-exon	FALSE	canonical	3	73	junction_1	27.5	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	NA	False	NA	NA	NA	27717961	27715803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_27716498_27716753_27716822_27717284
tx.11898	chr8	+	826	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	29	1142	29	34	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	5168	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTCTGAACTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	27750385	27765560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_27750579_27763350_27763531_27765107
tx.11899	chr8	+	2163	7	FSM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	5	965	4	-965	multi-exon	FALSE	canonical	3	124	junction_5	19.2476549798208	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCTCTTCTATTTGT	NA	False	NA	NA	False	NA	NA	NA	31640347	31650117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
tx.119	chr1	+	3006	11	FSM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	132	0	-50	0	multi-exon	FALSE	canonical	3	15	junction_7	3.104834939252	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGATATGCTCACTTA	NA	False	NA	NA	False	NA	NA	NA	44590802	44835998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
tx.11900	chr8	-	1146	2	ISM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	7975	0	7905	0	3prime_fragment	FALSE	canonical	3	777	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	False	NA	NA	False	NA	NA	NA	31650817	31649490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_31650606_31650786
tx.11901	chr8	-	1899	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	3	0	2	0	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	482	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	False	NA	NA	False	NA	NA	NA	31658789	31649490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
tx.11902	chr8	+	2943	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	19	0	4	0	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGTCGCAGACTCTC	NA	False	NA	NA	False	NA	NA	NA	31677378	31727822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
tx.11903	chr8	+	1571	7	FSM	ENSMUSG00000009630.11	ENSMUST00000009774.11	1469	7	260	-362	260	362	multi-exon	FALSE	canonical	3	909	junction_3	33.4398298772919	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAACTGTGATGTACA	9125	False	NA	NA	False	NA	NA	NA	34089912	34109831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149
tx.11904	chr8	-	1650	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	-9	1167	-9	-1167	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCTTAAGGTATCTTT	4661	False	NA	NA	False	NA	NA	NA	34132004	34110780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
tx.11905	chr8	+	2202	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	470	1	470	-1	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCAGTGTATTTT	872	False	NA	NA	False	NA	NA	NA	34143735	34188190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
tx.11906	chr8	+	1731	7	ISM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	28237	1	12473	-1	3prime_fragment	FALSE	canonical	3	1640	junction_6	140.478250590221	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCAGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	34171502	34188190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
tx.11907	chr8	+	1563	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	76	-5	76	-4	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGCTTTGTTTTAAA	5101	False	NA	NA	False	NA	NA	NA	34221936	34267197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
tx.11908	chr8	+	1546	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	25	-5	25	-4	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	642	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGCTTTGTTTTAAA	5259	False	NA	NA	False	NA	NA	NA	34222094	34267197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
tx.11909	chr8	-	2231	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	235	0	177	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	NA	NA	NA	34419656	34272670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
tx.1191	chr10	-	1709	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	-3	-1	-3	1	multi-exon	FALSE	canonical	3	269	junction_5	22.702422778197	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTTTAATGTTTAT	NA	False	NA	NA	False	NA	NA	NA	89568160	89547831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
tx.11910	chr8	-	924	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	328	-3	-5	0	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	257	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	NA	False	NA	NA	NA	34575622	34557573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
tx.11911	chr8	-	911	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	238	1730	238	-1730	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	232	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATACATGAGTAAGTTTT	9024	False	NA	NA	False	NA	NA	NA	34613949	34604455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
tx.11912	chr8	+	1871	6	FSM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	25	1	12	-1	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCGTGTTTCGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	34621741	34637998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
tx.11913	chr8	+	486	4	FSM	ENSMUSG00000100605.2	ENSMUST00000188318.2	418	4	-63	-5	-63	5	multi-exon	FALSE	canonical	3	16	junction_3	5.71547606649408	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTCTTTCTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	34683949	34693304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_34684111_34688020_34688119_34691015_34691123_34693184
tx.11914	chr8	+	734	2	FSM	ENSMUSG00000054247.7	ENSMUST00000210951.2	834	2	535	-435	535	429	multi-exon	FALSE	canonical	3	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTTTTTTCTCTATCC	NA	False	NA	NA	False	NA	NA	NA	35434121	35435310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_35434214_35434668
tx.11915	chr8	-	2805	6	ISM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	4182	1984	3701	-1984	3prime_fragment	FALSE	canonical	3	346	junction_2	30.9425273693019	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCTCATTGGCATTGCC	NA	False	NA	NA	False	NA	NA	NA	35958505	35934390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354
tx.11916	chr8	-	1572	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	17	3490	17	-3490	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAAGGTAGTGTTTGCCC	NA	False	NA	NA	False	NA	NA	NA	35962670	35935896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
tx.11917	chr8	+	1703	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	10	1034	10	178	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTGTTATTCT	NA	False	NA	NA	False	NA	NA	NA	39473008	39618333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
tx.11918	chr8	+	1612	9	NIC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	16	183	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	47.9785108147387	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGTTATTCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	39473014	39618338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39593682_39593747_39597896_39597972_39610300_39610392_39617866
tx.11919	chr8	-	2584	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	30	1	-2	-1	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGTGACTGATGGCT	NA	False	NA	NA	False	NA	NA	NA	40964765	40945581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
tx.1192	chr10	-	1581	5	FSM	ENSMUSG00000019979.13	ENSMUST00000161987.8	2710	5	-321	1450	20	48	multi-exon	FALSE	canonical	3	68	junction_4	12.1449578014911	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTCTATTGGACA	NA	False	NA	NA	False	NA	NA	NA	90918612	90902703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
tx.11920	chr8	-	727	3	FSM	ENSMUSG00000031601.17	ENSMUST00000146280.2	726	3	2	-3	-2	3	multi-exon	FALSE	canonical	3	487	junction_2	66.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTAGTTATAGAGATGT	NA	False	NA	NA	False	NA	NA	NA	40964761	40960355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_40960690_40963055_40963268_40964580
tx.11921	chr8	+	1791	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	0	4211	0	3	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGCTAATTTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	40964823	40999587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
tx.11922	chr8	-	2484	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	6	-2	6	2	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAATCATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	41087813	41004139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
tx.11923	chr8	-	2067	11	ISM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	37398	-6	-6864	0	3prime_fragment	TRUE	canonical	3	264	junction_1	14.7203940164657	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCATTTTATTTTTCC	6156	False	NA	NA	False	NA	NA	NA	41050421	41004135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325
tx.11924	chr8	-	1967	10	ISM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	44238	-2	-24	2	3prime_fragment	FALSE	canonical	3	264	junction_1	15.5022897552046	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAATCATTTTATTT	9901	False	NA	NA	False	NA	NA	NA	41043581	41004139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452
tx.11925	chr8	-	2782	7	ISM	ENSMUSG00000045636.17	ENSMUST00000051379.14	3964	10	39489	364	-2172	-364	3prime_fragment	TRUE	canonical	3	117	junction_2	9.10433352249844	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAGCCTCTGACATA	NA	False	NA	NA	False	NA	NA	NA	41455414	41444452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341
tx.11926	chr8	-	985	6	NNC	ENSMUSG00000031594.10	novel	1120	8	NA	NA	5765	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	3.55527776692624	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGCCATGGTAATTGT	NA	False	NA	NA	False	NA	NA	NA	41662425	41644470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_41644718_41649994_41650183_41650350_41650440_41652688_41652787_41653481_41653642_41662222
tx.11927	chr8	+	527	3	ISM	ENSMUSG00000031592.11	ENSMUST00000210862.2	691	4	-169	1432	-156	-1432	5prime_fragment	FALSE	canonical	3	147	junction_1	7.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAGAAAAAGTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	41692632	41710871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_41693001_41709032_41709148_41710827
tx.11928	chr8	-	2201	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	107	465	-31	-1	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	820	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCAGTCATGCATGCT	7608	False	NA	NA	False	NA	NA	NA	41827703	41793698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
tx.11929	chr8	-	1072	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	-36	3	-36	-3	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	484	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAGAGTTCTCGAGTCC	NA	False	NA	NA	False	NA	NA	NA	41870147	41850498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
tx.1193	chr10	+	1230	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020150.10	1328	3	104	-6	-13	6	multi-exon	FALSE	canonical	3	39	junction_2	32.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTCCATAATATTTTT	742	False	NA	NA	False	NA	NA	NA	90918905	90938475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_90919159_90929000_90929119_90937616
tx.11930	chr8	-	1476	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38821	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	56.917093702644	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	43633344	43582844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43633233
tx.11931	chr8	+	1551	8	FSM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	-12	-20	-12	3	multi-exon	FALSE	canonical	3	424	junction_1	49.9477277781891	354	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	NA	False	NA	NA	NA	43633565	43646921	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
tx.11932	chr8	-	1820	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-48	0	-48	0	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	2443	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	NA	NA	NA	43760065	43748103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
tx.11933	chr8	+	1176	5	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_4	30.1775993080961	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTATGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	43806963	43824716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_43807132_43809132_43809201_43811094_43811168_43818030_43818205_43824023
tx.11934	chr8	-	966	3	FSM	ENSMUSG00000110231.2	ENSMUST00000209210.2	936	3	-26	-4	-26	4	multi-exon	FALSE	canonical	3	13	junction_1	4	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAACTGACTCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	45618282	45613526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_45614092_45614492_45614559_45617947
tx.11935	chr8	+	1589	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	0	51	0	47	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGAATATTCTTTTAA	8860	False	NA	NA	False	NA	NA	NA	46428564	46449944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
tx.11936	chr8	+	1529	11	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	3680	51	3630	47	3prime_fragment	FALSE	canonical	3	163	junction_5	21.503720608304	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGAATATTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	46432244	46449944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
tx.11937	chr8	+	333	2	FSM	ENSMUSG00000031634.14	ENSMUST00000151983.2	694	2	408	-47	408	47	multi-exon	FALSE	canonical	3	208	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGAATATTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	46448572	46449944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_46448700_46449738
tx.11938	chr8	-	927	5	FSM	ENSMUSG00000050914.17	ENSMUST00000053558.10	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	16.393596310755	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGCATTCTTTACTA	NA	False	NA	NA	False	NA	NA	NA	46452904	46449938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452653
tx.11939	chr8	-	718	5	NNC	ENSMUSG00000050914.17	novel	927	5	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_4	13.6083614002568	34	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGCATTCTTTACTA	NA	False	NA	NA	False	NA	NA	NA	46452937	46449938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452895
tx.1194	chr10	-	1342	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	53	217	-3	0	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	1661	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	90959868	90952652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
tx.11940	chr8	+	1129	2	ISM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	-56	25058	-56	92	5prime_fragment	FALSE	canonical	3	40	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAAGCATGGACAG	NA	False	NA	NA	False	NA	NA	NA	46616631	46623569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_46616787_46622595
tx.11941	chr8	+	1432	3	FSM	ENSMUSG00000031631.16	ENSMUST00000145080.8	1430	3	4	-6	4	6	multi-exon	FALSE	canonical	3	9	junction_1	5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGGAGTATCATTTGAA	NA	False	NA	NA	False	NA	NA	NA	46616732	46623838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_46616787_46617798_46617934_46622595
tx.11942	chr8	-	1296	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	254	375	0	-375	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	1924	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTCCCTGCCCTTATT	NA	False	NA	NA	False	NA	NA	NA	46664067	46660208	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
tx.11943	chr8	+	3552	21	FSM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	6	339	6	131	multi-exon	FALSE	canonical	3	339	junction_9	34.1571368823559	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCATTTCACTTTAC	2212	False	NA	NA	False	NA	NA	NA	46924079	46988749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
tx.11944	chr8	+	1729	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	-7	1288	-7	341	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGATAGAACGGTTGC	NA	False	NA	NA	False	NA	NA	NA	47005082	47031754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
tx.11945	chr8	+	1624	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	19	1288	-8	341	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGATAGAACGGTTGC	NA	False	NA	NA	False	NA	NA	NA	47005081	47031754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
tx.11946	chr8	+	1080	8	ISM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	10421	1368	748	261	3prime_fragment	FALSE	canonical	3	263	junction_6	12.2690917449051	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAATGATCCTGGTTA	NA	False	NA	NA	False	NA	NA	NA	47015510	47031674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
tx.11947	chr8	-	2205	14	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	8	266	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	37.0480257641045	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	NA	False	NA	NA	NA	47070227	47031631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
tx.11948	chr8	-	2117	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	-18	-266	-14	266	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	NA	False	NA	NA	NA	47070261	47031631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
tx.11949	chr8	-	1888	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-19	266	combination_of_known_splicesites	FALSE	canonical	3	31	junction_7	35.2230984819148	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	NA	False	NA	NA	NA	47070266	47031631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
tx.1195	chr10	-	2556	5	FSM	ENSMUSG00000019961.18	ENSMUST00000213262.2	788	5	345	-2113	345	0	multi-exon	FALSE	canonical	3	670	junction_4	84.0903531922658	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	NA	False	NA	NA	NA	90989211	90983432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139
tx.11950	chr8	+	2495	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	106	0	2	0	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	47070431	47092724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
tx.11951	chr8	-	2267	2	ISM	ENSMUSG00000038143.17	ENSMUST00000079195.6	10467	4	95930	5892	26721	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTGCCACAAAATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	47646507	47638974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_47639608_47644873
tx.11952	chr8	-	470	2	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTATGGCATTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	47789586	47788337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_-_47788598_47789376
tx.11953	chr8	-	2071	11	ISM	ENSMUSG00000038102.16	ENSMUST00000123958.8	3932	23	19274	-2	5605	2	3prime_fragment	TRUE	canonical	3	114	junction_2	18.0930926046378	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCGTAAATACCTTTGG	NA	False	NA	NA	False	NA	NA	NA	47958778	47943160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620
tx.11954	chr8	-	4317	30	FSM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	2	13	2	0	multi-exon	FALSE	canonical	3	87	junction_18	20.4181612288351	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4056	False	NA	NA	False	NA	NA	NA	47986500	47943162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
tx.11955	chr8	-	1562	6	NIC	ENSMUSG00000038102.16	novel	4646	29	NA	NA	5	422	intron_retention	FALSE	canonical	3	108	junction_5	19.61224107541	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTCGATTGAAGTAAT	4059	False	NA	NA	False	NA	NA	NA	47986497	47977269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
tx.11956	chr8	+	1965	7	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-17	565	intron_retention	FALSE	canonical	0	0	junction_6	72.1795600491503	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTGATGTTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	47986681	48004890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003729
tx.11957	chr8	-	1317	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	448	1047	448	530	multi-exon	FALSE	canonical	3	212	junction_1	0	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATTGCCTCCATGTCT	NA	False	NA	NA	False	NA	NA	NA	48127745	48121259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_48122372_48127540
tx.11958	chr8	-	2596	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	3	865	2	-764	multi-exon	FALSE	canonical	3	60	junction_1	33.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTACCCTGGTCATAAC	NA	False	NA	NA	False	NA	NA	NA	48166964	48163243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_48165330_48165953_48166054_48166554
tx.11959	chr8	-	2612	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	0	781	0	-781	multi-exon	FALSE	canonical	3	65	junction_1	31	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTGTTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	48166966	48163260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_48165330_48165922_48166054_48166554
tx.1196	chr10	-	3511	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	21	2	5	-2	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGACAGTCTGAGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	92558261	92520609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
tx.11960	chr8	+	1887	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	209	0	2	0	multi-exon	FALSE	canonical	3	319	junction_1	42.4480859403578	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	NA	False	NA	NA	NA	48563201	48594700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
tx.11961	chr8	+	1835	4	FSM	ENSMUSG00000031562.17	ENSMUST00000173991.8	786	4	-152	-897	0	-3	multi-exon	TRUE	canonical	3	319	junction_1	45.0209827623619	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATAAAGACTGGAAGGTG	NA	False	NA	NA	False	NA	NA	NA	48563047	48591623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292
tx.11962	chr8	+	1954	6	NIC	ENSMUSG00000031562.17	novel	1126	5	NA	NA	157	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	132.43775896624	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	NA	False	NA	NA	NA	48563402	48594700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
tx.11963	chr8	+	2257	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	0	42639	0	-42639	5prime_fragment	FALSE	canonical	3	54	junction_1	0	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTTTCTCGTGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	52809645	52813735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_52809842_52811674
tx.11964	chr8	+	1272	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	-7	-84	-7	1	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCTACTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	53964754	53976457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
tx.11965	chr8	-	2204	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	49	0	49	0	multi-exon	FALSE	canonical	3	23	junction_4	6.19039478985961	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	54092051	54039901	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
tx.11966	chr8	+	2047	7	FSM	ENSMUSG00000031520.7	ENSMUST00000033919.6	2449	7	-243	645	-243	-645	multi-exon	FALSE	canonical	3	36	junction_4	8.69386757049665	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGAAGTTCAGTCTTTT	778	False	NA	NA	False	NA	NA	NA	54530397	54639486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_54530961_54609992_54610195_54612327_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
tx.11967	chr8	+	1684	7	FSM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_2	3.18416219575713	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATTGCCTATTCCTTT	NA	False	NA	NA	False	NA	NA	NA	56747619	56774079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
tx.11968	chr8	-	1682	11	FSM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	8	0	-6	0	multi-exon	FALSE	canonical	3	35	junction_10	43.9777216326631	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	NA	False	NA	NA	NA	57003884	56984556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003579
tx.11969	chr8	+	1970	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	25	1576	6	-30	multi-exon	TRUE	canonical	3	53	junction_4	8.56504524214554	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTATTTACTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	57004149	57045398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
tx.1197	chr10	-	2108	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	195	1909	29	0	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCAAAGTGCACTTTTT	NA	False	NA	NA	False	NA	NA	NA	93146802	93085184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
tx.11970	chr8	-	828	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	353	-3	353	3	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTCAGCCTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	57940541	57935737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
tx.11971	chr8	+	1125	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	-7	1510	-7	1280	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	2032	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGTGTTTGTATTA	NA	False	NA	NA	False	NA	NA	NA	57964933	57967523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
tx.11972	chr8	-	3465	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	-39	-13	-10	13	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCAATGTGGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	58106076	57977720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
tx.11973	chr8	-	4316	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	-2	-1	-1	1	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	58106067	57976860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
tx.11974	chr8	+	1204	8	FSM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	-13	0	-7	0	multi-exon	FALSE	canonical	3	724	junction_4	79.3373062516324	469	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	61343471	61360614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
tx.11975	chr8	-	2060	4	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	27812	1533	-4461	1	3prime_fragment	FALSE	canonical	3	202	junction_1	29.0095769627128	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGTTAATATTGCACAT	964	False	NA	NA	False	NA	NA	NA	61380455	61364955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265
tx.11976	chr8	-	4100	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	0	-1	0	1	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGTTAATATTGCACAT	NA	False	NA	NA	False	NA	NA	NA	61436273	61364955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
tx.11977	chr8	-	2895	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	44	2579	-12	-1045	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACAAGGCGAGCTTTG	NA	False	NA	NA	False	NA	NA	NA	61436290	61366001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
tx.11978	chr8	+	1102	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	-3	3210	-3	95	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTGCTAAGAGTATTT	2563	False	NA	NA	False	NA	NA	NA	61940764	61956518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
tx.11979	chr8	-	3233	8	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	57533	1	232	-1	3prime_fragment	FALSE	canonical	3	101	junction_4	7.79848232226067	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGGCCCTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	61986643	61964467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387
tx.1198	chr10	+	946	2	Antisense	novelGene_ENSMUSG00000008398.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATCATGGTTGGGGGTT	NA	False	NA	NA	False	NA	NA	NA	93142488	93144008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_93142794_93143367
tx.11980	chr8	-	1830	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	214	0	0	0	multi-exon	TRUE	canonical	3	690	junction_2	21.3822356174466	604	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	65186612	65171172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
tx.11981	chr8	+	1085	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	37	0	3	0	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGTATGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	65399873	65421685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
tx.11982	chr8	-	972	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	-24	-3	-24	0	multi-exon	FALSE	canonical	3	429	junction_2	5	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	65489848	65481068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_65481644_65488316_65488407_65489541
tx.11983	chr8	-	1005	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-5	3328	-3	-2116	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGAATTTGCTATTGAA	NA	False	NA	NA	False	NA	NA	NA	66939176	66929097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
tx.11984	chr8	-	1066	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-32	2116	1	-2116	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGAATTTGCTATTGAA	NA	False	NA	NA	False	NA	NA	NA	66939181	66929097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
tx.11985	chr8	+	1382	2	FSM	ENSMUSG00000051147.11	ENSMUST00000093470.7	1396	2	10	4	10	-4	multi-exon	FALSE	canonical	2	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAAAGTGGTATA	NA	False	NA	NA	False	NA	NA	NA	67947519	67955232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_67947555_67953885
tx.11986	chr8	+	2609	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	116	-7	116	2	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	68729334	68800353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
tx.11987	chr8	+	2417	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	-7	160	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	163.936296697833	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	NA	False	NA	NA	NA	69246618	69280313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263227_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
tx.11988	chr8	+	2427	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	25	1749	-2	160	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	NA	False	NA	NA	NA	69246605	69280313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
tx.11989	chr8	+	2076	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	134	1905	-32	-1905	multi-exon	TRUE	canonical	3	87	junction_5	14.4871164560059	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAACCAGGAACGTGT	NA	False	NA	NA	False	NA	NA	NA	69333276	69357681	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
tx.1199	chr10	+	2028	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	2	-1	2	0	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	NA	False	NA	NA	NA	93289274	93320737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
tx.11990	chr8	+	2713	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	112	0	-10	0	multi-exon	TRUE	canonical	3	1214	junction_12	88.1479391228044	140	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	69541409	69566363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
tx.11991	chr8	+	2993	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	8	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGACCCTTGTCCTGTA	7208	False	NA	NA	False	NA	NA	NA	69661697	69683188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
tx.11993	chr8	+	764	5	NIC	ENSMUSG00000079038.4	novel	2002	6	NA	NA	-2	-768	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	0.82915619758885	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATCTCCAAATCCATAGA	7151	False	NA	NA	False	NA	NA	NA	69723735	69755046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_69723844_69743913_69743975_69752904_69753032_69753409_69753474_69754642
tx.11994	chr8	-	3183	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	-26	4511	-9	1124	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTATGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	69848200	69823672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
tx.11995	chr8	-	2454	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	3	-198	0	198	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTTAGTGCCTCCCAT	NA	False	NA	NA	False	NA	NA	NA	70078196	70063309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
tx.11996	chr8	-	3179	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	-4	5	-4	-2	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	NA	False	NA	NA	NA	70169556	70157791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
tx.11998	chr8	+	2716	3	FSM	ENSMUSG00000031861.17	ENSMUST00000034325.6	5837	3	146	2975	-9	-2974	multi-exon	FALSE	canonical	3	18	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAAACGTCTCTTTCTTT	480	False	NA	NA	False	NA	NA	NA	70275224	70280777	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70275362_70276203_70276946_70278940
tx.11999	chr8	-	502	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	908	-11	908	11	3prime_fragment	FALSE	canonical	3	6124	junction_2	115.905133622286	875	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGACTCTATCGTGGATC	NA	False	NA	NA	False	NA	NA	NA	70354300	70346818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
tx.12	chr1	+	1815	12	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	6	-163	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.4879650744496	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	NA	NA	NA	9618285	9646963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_9618377_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
tx.120	chr1	+	1142	7	ISM	ENSMUSG00000025995.17	ENSMUST00000154436.8	3226	20	52	16377	-2	1780	5prime_fragment	FALSE	canonical	3	530	junction_5	65.1425786682992	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGACAAAATAACAATCAAAT	NA	False	NA	NA	False	NA	NA	NA	45834660	45846387	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832
tx.1200	chr10	-	449	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	48	364	48	-364	multi-exon	FALSE	canonical	3	2132	junction_3	195.841772867792	315	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTTGTGGACTATTTA	NA	False	NA	NA	False	NA	NA	NA	93425520	93419254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
tx.12000	chr8	+	2080	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	213	388	-8	-388	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATTCCAGTTCCTGCTG	2370	False	NA	NA	False	NA	NA	NA	70495675	70524609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
tx.12001	chr8	+	2097	2	ISM	ENSMUSG00000071078.7	ENSMUST00000211898.2	1078	4	0	1	0	-1	intron_retention	FALSE	canonical	3	606	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACACCCCATTTGTGGT	447	False	NA	NA	False	NA	NA	NA	70583982	70586397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_70584250_70584567
tx.12002	chr8	-	1243	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-94	2460	-94	0	multi-exon	FALSE	canonical	3	42	junction_5	11.7626261948597	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGGGTGCCTCCCA	9451	False	NA	NA	False	NA	NA	NA	70591898	70585915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
tx.12003	chr8	-	1271	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	-150	0	-92	0	multi-exon	TRUE	canonical	2	7	junction_5	20.7590341779188	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGGGTGCCTCCCA	9453	False	NA	NA	False	NA	NA	NA	70591896	70585915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
tx.12004	chr8	+	615	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	200	-5	-8	0	multi-exon	TRUE	canonical	3	86	junction_5	44.6183818621877	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTCTTTCCATGCTGGG	8813	False	NA	NA	False	NA	NA	NA	70592348	70599911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
tx.12005	chr8	+	777	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	-7	-14	-7	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTTTGACCAGTCTG	8814	False	NA	NA	False	NA	NA	NA	70592349	70598199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
tx.12006	chr8	+	2189	12	FSM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	0	829	0	2	multi-exon	FALSE	canonical	3	91	junction_1	38.6768771547844	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTACCATGGTGCC	5866	False	NA	NA	False	NA	NA	NA	70625054	70635502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
tx.12007	chr8	+	2118	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	-20	-18	-17	1	multi-exon	FALSE	canonical	3	25	junction_1	59.2504008425259	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGTGGTCTGGCCCA	5849	False	NA	NA	False	NA	NA	NA	70625037	70635518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
tx.12008	chr8	+	2154	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1897	829	-1	2	3prime_fragment	FALSE	canonical	3	184	junction_1	15.5935884260166	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTACCATGGTGCC	7763	False	NA	NA	False	NA	NA	NA	70626951	70635502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
tx.12009	chr8	+	2068	10	ISM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	4436	-20	-1	3	3prime_fragment	FALSE	canonical	3	195	junction_4	12.2474487139159	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTGGTCTGGCCCAGT	NA	False	NA	NA	False	NA	NA	NA	70629493	70635520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
tx.1201	chr10	-	759	2	ISM	ENSMUSG00000036112.16	ENSMUST00000181894.2	3034	3	1616	1096	1547	6	3prime_fragment	FALSE	canonical	3	2160	junction_1	0	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTAATGTGTATGGT	NA	False	NA	NA	False	NA	NA	NA	93698316	93696783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_93697465_93698238
tx.12012	chr8	-	2232	8	FSM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	31	0	14	0	multi-exon	FALSE	canonical	3	72	junction_3	11.6741472616082	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCATTTTTCTCACCT	4699	False	NA	NA	False	NA	NA	NA	70687085	70672821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
tx.12013	chr8	+	671	5	FSM	ENSMUSG00000003573.16	ENSMUST00000087467.12	880	5	220	-11	13	11	multi-exon	FALSE	canonical	3	53	junction_4	81.1202810646018	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCTTTGGTGTAAATG	NA	False	NA	NA	False	NA	NA	NA	70735696	70739191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70738945
tx.12014	chr8	-	1534	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	18	585	-8	135	multi-exon	TRUE	canonical	3	250	junction_9	19.6148682268211	171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9949	False	NA	NA	False	NA	NA	NA	70755121	70746100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
tx.12015	chr8	+	1052	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	249	-1	-2	1	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	915	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCTGATACCCACCAG	701	False	NA	NA	False	NA	NA	NA	70755416	70765641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
tx.12016	chr8	-	960	5	NNC	ENSMUSG00000003575.14	novel	870	4	NA	NA	-28	548	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	29.1247317584214	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACACAGTGTGGGTGTCC	5185	False	NA	NA	False	NA	NA	NA	70892257	70856950	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_70857419_70857908_70857971_70858727_70858866_70861544_70861662_70892082
tx.12017	chr8	-	658	5	FSM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	13	0	-2	0	multi-exon	FALSE	canonical	3	754	junction_4	53.0518614188041	459	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	70959389	70956944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959311
tx.12018	chr8	-	503	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	208	0	6	0	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	4031	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	NA	False	NA	NA	NA	70963023	70960912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
tx.12019	chr8	+	1698	9	FSM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	2	-2	2	0	multi-exon	FALSE	canonical	0	0	junction_1	448.998590615828	215	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	70980398	70987978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
tx.1202	chr10	-	1977	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	14	2433	8	6	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTAATGTGTATGGT	NA	False	NA	NA	False	NA	NA	NA	93725662	93696783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
tx.12020	chr8	+	1543	3	ISM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	51041	0	51041	0	3prime_fragment	FALSE	canonical	3	124	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTGGTTTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	71043378	71045508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_71043516_71044019_71044065_71044147
tx.12021	chr8	+	1856	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	-18	-2	-10	0	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTGTGTGCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	71047112	71049940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
tx.12022	chr8	-	1434	17	FSM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	41	0	-5	0	multi-exon	TRUE	canonical	3	428	junction_1	289.200298236361	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	71060923	71050139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
tx.12023	chr8	-	1088	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	457	0	457	0	multi-exon	FALSE	canonical	3	308	junction_1	0	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	1472	False	NA	NA	False	NA	NA	NA	71084288	71082042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71082825_71083982
tx.12024	chr8	-	1522	3	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	115.5	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	480	False	NA	NA	False	NA	NA	NA	71085280	71082042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_71082825_71083982_71084242_71084799
tx.12025	chr8	+	538	2	Antisense	novelGene_ENSMUSG00000056204.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTGTTGCTGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	71102194	71104143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr8_+_71102367_71103777
tx.12026	chr8	-	1415	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	26	3442	26	301	multi-exon	TRUE	canonical	3	150	junction_1	24.3554408705735	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTATTTGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	71112362	71102526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
tx.12027	chr8	+	794	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	131	0	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	1931	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	71126028	71131402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
tx.12028	chr8	+	882	3	FSM	ENSMUSG00000095026.3	ENSMUST00000213065.2	842	3	-38	-2	-38	2	multi-exon	FALSE	canonical	3	28	junction_1	4.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTCTCACGATTCAGA	NA	False	NA	NA	False	NA	NA	NA	71171153	71175285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71171282_71174425_71174587_71174692
tx.12029	chr8	+	1172	4	FSM	ENSMUSG00000095026.3	ENSMUST00000179347.3	1149	4	-19	-4	-19	2	multi-exon	FALSE	canonical	2	5	junction_1	14.4299072146089	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTCTCACGATTCAGA	NA	False	NA	NA	False	NA	NA	NA	71171172	71175285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71171282_71173068_71173378_71174425_71174587_71174692
tx.12030	chr8	+	1419	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	32	-9	0	9	multi-exon	FALSE	canonical	3	27	junction_1	12.8646803302686	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCTTGCATCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	71207359	71211332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
tx.12031	chr8	-	1010	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_3	276.99311814556	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	71213581	71211294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_71211671_71211754_71211884_71212036_71212155_71213013_71213185_71213365
tx.12032	chr8	-	970	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	10	0	10	0	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	227	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	71213582	71211294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
tx.12033	chr8	-	981	7	FSM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	0	-1	0	1	multi-exon	FALSE	canonical	3	181	junction_6	19.0065778087482	287	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTCCTAGAGTTGG	NA	False	NA	NA	False	NA	NA	NA	71219307	71215417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
tx.12034	chr8	-	3157	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	5	3	5	-3	multi-exon	TRUE	canonical	3	127	junction_15	21.8259784049498	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	NA	False	NA	NA	NA	71229352	71220822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
tx.12035	chr8	-	1655	6	ISM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	919	0	717	0	3prime_fragment	FALSE	canonical	0	0	junction_5	41.0385184917779	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCGTCTTTTCATTTG	NA	False	NA	NA	False	NA	NA	NA	71291445	71287772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337
tx.12036	chr8	-	912	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	445	-1	-107	1	multi-exon	FALSE	canonical	3	353	junction_4	97.9030132324843	243	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTCTGTATGTGTGG	NA	False	NA	NA	False	NA	NA	NA	71326134	71320869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
tx.12037	chr8	-	621	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	-18	657	-18	0	multi-exon	FALSE	canonical	3	16397	junction_4	7934.97659101777	1078	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	NA	False	NA	NA	NA	71350074	71348022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
tx.12038	chr8	-	548	4	ISM	ENSMUSG00000045128.10	ENSMUST00000212709.2	700	5	970	-2	970	-2	3prime_fragment	FALSE	canonical	3	19470	junction_3	6697.45953494474	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTTGTTTGCTTCTA	NA	False	NA	NA	False	NA	NA	NA	71348957	71348024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776
tx.12039	chr8	+	1053	5	NIC	ENSMUSG00000019261.4	novel	3323	8	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	129.617466029853	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	71358608	71370173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_71358772_71363588_71363694_71364489_71364573_71368994_71369219_71369695
tx.1204	chr10	+	2362	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-155	1525	-155	5	multi-exon	FALSE	canonical	3	23	junction_4	6	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTTCTCTTCCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	93983729	94031548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
tx.12040	chr8	+	3266	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	50	-2	0	0	multi-exon	FALSE	canonical	3	269	junction_1	20.5236990384829	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	71358625	71370173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
tx.12041	chr8	+	843	3	NIC	ENSMUSG00000019261.4	novel	4635	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	161.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	71358630	71370173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_71358772_71368994_71369219_71369695
tx.12042	chr8	-	1583	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	431	-1	-25	1	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	523	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	569	False	NA	NA	False	NA	NA	NA	71725147	71703767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
tx.12043	chr8	+	843	7	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	312.764954345378	131	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	NA	False	NA	NA	NA	71819867	71822375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820763_71821490_71821522_71821775_71821948_71822170
tx.12044	chr8	+	766	6	NNC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	-66	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	341.95344712402	74	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	NA	False	NA	NA	NA	71820218	71822375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_71820338_71820413_71820493_71820602_71820763_71821490_71821522_71821775_71821948_71822170
tx.12045	chr8	+	1087	4	FSM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	-7	531	-7	203	multi-exon	FALSE	canonical	3	42	junction_2	9.2736184954957	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTGCAGCTACCTAAAA	NA	False	NA	NA	False	NA	NA	NA	71823975	71825802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71824630_71825111_71825278_71825392_71825447_71825589
tx.12046	chr8	+	913	3	FSM	ENSMUSG00000002396.9	ENSMUST00000110051.2	2179	3	43	1223	2	204	multi-exon	FALSE	canonical	3	32	junction_1	15.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGCAGCTACCTAAAAG	NA	False	NA	NA	False	NA	NA	NA	71823984	71825803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71824630_71825392_71825447_71825589
tx.12047	chr8	+	1358	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	6	69	6	-69	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGTGTCACTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	71849510	71857194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
tx.12048	chr8	+	2234	8	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	-1	-15	intron_retention	TRUE	canonical	3	30	junction_4	27.1916854038517	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTACTCTGGAATGCTA	NA	False	NA	NA	False	NA	NA	NA	71858652	71862533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565
tx.12049	chr8	+	2141	9	FSM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	0	-5	0	5	multi-exon	FALSE	canonical	3	14	junction_4	30.5366071298041	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTCCATGTCTCATC	NA	False	NA	NA	False	NA	NA	NA	71858653	71862553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
tx.1205	chr10	+	536	4	FSM	ENSMUSG00000020022.18	ENSMUST00000179990.8	566	4	31	-1	-2	1	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	240	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTTGTGCGTTCAC	NA	False	NA	NA	False	NA	NA	NA	94034896	94056811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
tx.12050	chr8	+	2071	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	25.4358875410315	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTTTGTCTCCATGTC	NA	False	NA	NA	False	NA	NA	NA	71858655	71862548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
tx.12051	chr8	-	1971	5	FSM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	7	0	7	0	multi-exon	FALSE	canonical	3	51	junction_3	6.41774882649672	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCTCCAATTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	71916292	71909348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889_71914617_71916109
tx.12052	chr8	-	1260	4	NIC	ENSMUSG00000007950.10	novel	1978	5	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	26.7124606795322	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCTCCAATTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	71916308	71909348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_71910022_71910681_71910899_71911021_71911193_71916109
tx.12053	chr8	+	616	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	904	junction_1	0	251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTACGTATGTATTAACT	8911	False	NA	NA	False	NA	NA	NA	71917593	71918391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71917712_71917893
tx.12054	chr8	+	1923	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	3	7	3	-7	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGCCCATCCTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	71921845	71928735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
tx.12055	chr8	+	1862	4	FSM	ENSMUSG00000074247.11	ENSMUST00000130098.8	1881	4	12	7	0	-7	multi-exon	FALSE	canonical	2	31	junction_2	319.275568888208	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGCCCATCCTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	71921854	71928735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71921970_71924680_71924762_71926418_71926481_71927131
tx.12056	chr8	+	2052	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	625	123	0	-123	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTAGTAGCATGTGG	NA	False	NA	NA	False	NA	NA	NA	71941371	71945921	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
tx.12057	chr8	-	956	4	ISM	ENSMUSG00000034845.7	ENSMUST00000048452.6	1987	6	3983	-6	3983	6	3prime_fragment	FALSE	canonical	3	9	junction_3	3.77123616632825	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATTTGTTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	71960413	71950402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_71951050_71959480_71959563_71959663_71959722_71960244
tx.12058	chr8	-	795	5	FSM	ENSMUSG00000046718.9	ENSMUST00000051672.9	792	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	305	junction_3	21.2176223927187	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGCTTCTAAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	71990103	71986898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_71987125_71987315_71987437_71988429_71988470_71989002_71989079_71989771
tx.12059	chr8	+	1070	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	-8	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	71995565	72000670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
tx.1206	chr10	+	3046	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	76	517	12	143	multi-exon	TRUE	canonical	0	0	junction_13	58.1305045183297	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTGTGTTTAATTTT	9580	False	NA	NA	False	NA	NA	NA	94524591	94626198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
tx.12061	chr8	+	893	5	FSM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_2	58.7132864009502	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTCTGTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	72044819	72048913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72048700
tx.12062	chr8	+	1752	3	ISM	ENSMUSG00000034807.10	ENSMUST00000212706.2	2860	4	2019	-2	2019	2	3prime_fragment	FALSE	canonical	3	971	junction_2	17.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCTTTGGGTTTGGTGC	NA	False	NA	NA	False	NA	NA	NA	72075345	72077552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_72075475_72075733_72075941_72076136
tx.12063	chr8	-	926	8	NIC	ENSMUSG00000034799.17	novel	944	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	3.4166459266004	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGTTATATATAACAAG	NA	False	NA	NA	False	NA	NA	NA	72124385	72112987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
tx.12065	chr8	-	2470	2	ISM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	7933	470	7933	-470	3prime_fragment	FALSE	canonical	3	159	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTACACCACCACCGCCC	NA	False	NA	NA	False	NA	NA	NA	72146500	72143869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_72145800_72145960
tx.12066	chr8	-	2636	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-37	456	-37	-456	multi-exon	FALSE	canonical	3	105	junction_2	27	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCGGTAATATTTCTGT	8484	False	NA	NA	False	NA	NA	NA	72154470	72143855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_72145800_72145960_72146544_72154361
tx.12067	chr8	+	746	3	FSM	ENSMUSG00000056019.13	ENSMUST00000188374.7	717	3	-167	138	-105	-138	multi-exon	FALSE	canonical	3	20	junction_2	1	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAGTATGGAATACAG	NA	False	NA	NA	False	NA	NA	NA	72635757	72641768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72636053_72641107_72641235_72641444
tx.12068	chr8	+	2943	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	-24	1	-24	-1	multi-exon	FALSE	canonical	3	55	junction_3	7.78888096369861	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTAGTGTTCTATTGCTG	NA	False	NA	NA	False	NA	NA	NA	72676671	72688472	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
tx.12069	chr8	+	2879	3	NIC	ENSMUSG00000066880.16	novel	2920	4	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	30	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	72676676	72688474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_72676817_72682045_72682173_72685862
tx.1207	chr10	-	1150	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-35	0	-35	0	multi-exon	FALSE	canonical	3	30	junction_2	28	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTCTTTCAATGAGAG	NA	False	NA	NA	False	NA	NA	NA	95159462	95011126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_95011841_95158447_95158752_95159330
tx.12070	chr8	+	2541	2	FSM	ENSMUSG00000052446.18	ENSMUST00000144807.2	701	2	-25	-1815	-11	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	NA	False	NA	NA	NA	72704898	72724177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72705005_72721742
tx.12071	chr8	+	2707	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	6	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	NA	False	NA	NA	NA	72704920	72724177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
tx.12072	chr8	+	2646	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	10	-2055	0	0	multi-exon	FALSE	canonical	3	96	junction_2	182.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	NA	False	NA	NA	NA	72704920	72724177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72705005_72719637_72719765_72721742
tx.12073	chr8	+	2126	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	30	2	1	0	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGATTTATTCTTT	NA	False	NA	NA	False	NA	NA	NA	72889102	72906984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
tx.12074	chr8	+	2031	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	13	0	13	0	multi-exon	FALSE	canonical	3	103	junction_1	228.433708510092	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGATTTATTCTTT	NA	False	NA	NA	False	NA	NA	NA	72889664	72906984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
tx.12075	chr8	+	1636	5	ISM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	8913	0	8913	0	3prime_fragment	FALSE	canonical	3	704	junction_1	29.3033701133504	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGATTTATTCTTT	NA	False	NA	NA	False	NA	NA	NA	72898564	72906984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
tx.12076	chr8	+	1608	4	ISM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	10644	0	10644	0	3prime_fragment	FALSE	canonical	3	724	junction_1	24.3447461820136	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGATTTATTCTTT	NA	False	NA	NA	False	NA	NA	NA	72900295	72906984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_72900372_72900900_72900964_72901041_72901112_72905585
tx.12077	chr8	+	1788	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	140	2622	-19	-2622	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	127	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCTCCCCTGGAGTCT	NA	False	NA	NA	False	NA	NA	NA	72915183	72935126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
tx.12078	chr8	+	1562	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	15	987	15	1	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	651	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTTGTGCGTGAAACA	NA	False	NA	NA	False	NA	NA	NA	72973588	72977275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
tx.12079	chr8	+	2018	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	66	0	-11	0	multi-exon	FALSE	canonical	3	513	junction_9	40.3802177244139	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	72993927	73011229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
tx.1208	chr10	+	498	3	NNC	ENSMUSG00000100550.3	novel	642	3	NA	NA	3101	4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	6	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGGGAAGTCAAGATGAA	NA	False	NA	NA	False	NA	NA	NA	95193850	95199082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_95193983_95194128_95194221_95198808
tx.12080	chr8	+	197	2	ISM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	2122	29	-2122	5prime_fragment	FALSE	canonical	3	2987	junction_1	0	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCCCCGCCGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	73072905	73073378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_73072994_73073269
tx.12081	chr8	+	795	2	NIC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	-70	-305	combination_of_known_splicesites	FALSE	canonical	3	215	junction_1	0	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	NA	False	NA	NA	NA	73072806	73075195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_73072994_73074587
tx.12082	chr8	-	2943	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-11	9	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	80.7011756547953	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATCTTCTTTTTAATCA	NA	False	NA	NA	False	NA	NA	NA	73175315	73094833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.12083	chr8	-	3136	24	FSM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	-3	-4	-3	4	multi-exon	FALSE	canonical	3	88	junction_2	82.9540606689901	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	73175307	73094838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.12084	chr8	-	2814	22	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-20	4	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	69.7814859566126	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	73175324	73094838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.12085	chr8	-	3380	16	FSM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	-3	-1	2	1	multi-exon	FALSE	canonical	3	313	junction_2	26.4222128772995	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTTGTTCAGTGTTCCA	NA	False	NA	NA	False	NA	NA	NA	73175302	73131260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
tx.12086	chr8	+	2396	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	31	460	-21	-100	multi-exon	FALSE	canonical	3	59	junction_1	11.7334338276463	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	73197754	73214385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
tx.12087	chr8	+	2114	7	ISM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	1073	460	1021	-100	3prime_fragment	FALSE	canonical	3	61	junction_3	11.6285090283416	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	73198796	73214385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
tx.12088	chr8	-	2132	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	26	734	0	-734	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTGTGTGTGTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	73324906	73319765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
tx.12089	chr8	+	2159	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	-37	2	-19	-2	multi-exon	FALSE	canonical	3	40	junction_3	8.51821577561874	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	73325879	73341124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
tx.1209	chr10	-	1451	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	32	-81	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGGGAATGTGATAATA	NA	False	NA	NA	False	NA	NA	NA	95252687	95223609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
tx.12090	chr8	+	1967	5	FSM	ENSMUSG00000031791.9	ENSMUST00000211914.2	820	5	-44	-1103	-8	2	multi-exon	FALSE	canonical	3	7	junction_2	20.2484567313166	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTTTCTTTATTCAGC	NA	False	NA	NA	False	NA	NA	NA	73325890	73341128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_73326072_73333406_73333564_73335028_73335117_73338543_73338662_73339705
tx.12091	chr8	+	1022	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	3	-1	0	1	multi-exon	FALSE	canonical	3	644	junction_5	27.2197844713485	425	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATGTGCAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	73449915	73466535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
tx.12092	chr8	+	4039	12	FSM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	-50	0	-50	0	multi-exon	FALSE	canonical	3	57	junction_2	21.8858798209528	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	75720256	75758606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
tx.12093	chr8	+	3891	11	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	24.8185414559357	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	75720300	75758606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
tx.12094	chr8	+	3472	8	ISM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	6365	69	175	-4	3prime_fragment	FALSE	canonical	3	83	junction_1	18.087090897733	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATTACAGTTGTATAAA	NA	False	NA	NA	False	NA	NA	NA	75726671	75758537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
tx.12095	chr8	+	2109	2	ISM	ENSMUSG00000034518.15	ENSMUST00000109940.2	2656	7	13264	-59	6631	0	3prime_fragment	FALSE	canonical	3	135	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGTCCAGTCTTAGCT	NA	False	NA	NA	False	NA	NA	NA	75756113	75758600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_75756239_75756616
tx.12096	chr8	+	2272	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	-7	2	-7	-2	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGCTCTGGCGGAAGC	NA	False	NA	NA	False	NA	NA	NA	75760325	75796747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
tx.12097	chr8	+	1570	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	104.358456772798	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	NA	False	NA	NA	NA	75820248	75827218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
tx.12098	chr8	+	2617	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-9	-4	-2	4	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	NA	False	NA	NA	NA	75836194	75854325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
tx.12099	chr8	+	2639	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	0	742	0	4	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	NA	False	NA	NA	NA	75836196	75854325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
tx.121	chr1	+	2623	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	332	-2	-5	2	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	223	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGCCTTGTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	45834657	45862781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
tx.1210	chr10	-	1557	2	FSM	ENSMUSG00000020027.19	ENSMUST00000119917.2	948	2	-9	-600	-9	404	multi-exon	FALSE	canonical	3	494	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAACGAAAAAAGAACCAT	NA	False	NA	NA	False	NA	NA	NA	95251154	95247877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_95248973_95250692
tx.12100	chr8	+	2773	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	7	1	-3	0	multi-exon	FALSE	canonical	3	124	junction_5	20.627751506924	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	NA	False	NA	NA	NA	78276032	78307966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
tx.12101	chr8	-	2718	10	FSM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	-36	-4	9	4	multi-exon	FALSE	canonical	3	71	junction_5	10.9927024053615	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTACGTGTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	78337318	78322606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
tx.12102	chr8	+	644	3	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	7	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGCCTCAGCCTTATG	NA	False	NA	NA	False	NA	NA	NA	78792911	78800554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_78793056_78799076_78799137_78800114
tx.12103	chr8	+	1225	3	FSM	ENSMUSG00000037101.17	ENSMUST00000124713.2	673	3	0	-552	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTTATTTTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	79117610	79120955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_79118107_79119699_79119767_79120293
tx.12104	chr8	-	1692	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	3	0	3	0	multi-exon	FALSE	canonical	3	249	junction_1	0	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	NA	NA	NA	79235524	79231897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_79233493_79235427
tx.12105	chr8	-	1650	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	-20	-8	-1	0	multi-exon	FALSE	canonical	3	608	junction_1	0	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	NA	NA	NA	79235528	79231897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_79233447_79235427
tx.12106	chr8	+	3585	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	12	-2	-12	2	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAAATGTCGTGGCT	NA	False	NA	NA	False	NA	NA	NA	79236008	79460634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
tx.12107	chr8	-	598	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	25	3169	25	3	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	79547744	79534662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
tx.12108	chr8	-	504	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	20	1583	20	3	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	79547749	79534662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
tx.12109	chr8	-	1318	6	ISM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	13282	4309	13025	1	3prime_fragment	FALSE	canonical	3	38	junction_5	16.7857082066858	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGAGTTTCCCTGAG	NA	False	NA	NA	False	NA	NA	NA	80008284	79994535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805
tx.1211	chr10	-	1688	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	8	526	8	404	multi-exon	FALSE	canonical	3	447	junction_2	23.5	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAACGAAAAAAGAACCAT	NA	False	NA	NA	False	NA	NA	NA	95252711	95247877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_95248973_95250692_95251054_95252479
tx.12110	chr8	-	766	5	NIC	ENSMUSG00000037022.4	novel	5650	7	NA	NA	-23	4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	28.7782469931718	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGAGTTTCCCTGAGTGC	NA	False	NA	NA	False	NA	NA	NA	80021589	79994532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80021542
tx.12111	chr8	-	1360	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	-19	4309	-19	1	multi-exon	FALSE	canonical	3	29	junction_6	17.5214154679352	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGAGTTTCCCTGAG	NA	False	NA	NA	False	NA	NA	NA	80021585	79994535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
tx.12112	chr8	-	2926	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	159	14	159	-14	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGATTAAAAAATGTGTC	NA	False	NA	NA	False	NA	NA	NA	80125988	80065037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
tx.12113	chr8	-	3552	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	63	178	-7	-178	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACCGGTGTGTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	80438306	80410268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
tx.12114	chr8	+	825	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-36	14	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATCTTTAAATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	80438412	80501985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
tx.12115	chr8	+	909	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	-20	1912	-20	66	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAGATATATATACTAT	NA	False	NA	NA	False	NA	NA	NA	80438428	80502037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
tx.12116	chr8	+	934	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	1	3656	1	61	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTTCAAGATATATAT	NA	False	NA	NA	False	NA	NA	NA	80438480	80502032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
tx.12117	chr8	-	813	5	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	33968	2332	5332	-2332	3prime_fragment	FALSE	canonical	3	1419	junction_2	118.560902071467	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTTCATTTGATTTA	NA	False	NA	NA	False	NA	NA	NA	81432158	81427467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075
tx.12118	chr8	-	3965	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21249	5	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTACTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	81585876	81491061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
tx.12119	chr8	-	4603	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	21	83	6	-83	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGATTTTTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	81741536	81707444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
tx.12120	chr8	-	1664	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	12	-1	-3	1	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	261	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGGTACTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	83500777	83490248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
tx.12121	chr8	-	1783	4	FSM	ENSMUSG00000063253.12	ENSMUST00000212031.2	409	4	4	-1378	0	1	multi-exon	FALSE	canonical	3	281	junction_1	12.1928941054479	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTGTGTTTT	7423	False	NA	NA	False	NA	NA	NA	84169130	84161122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84169050
tx.12122	chr8	+	551	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	72	0	-15	0	multi-exon	FALSE	canonical	3	2087	junction_2	87.5	277	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTGTGCTACTTCAA	NA	False	NA	NA	False	NA	NA	NA	84293371	84298255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_84293560_84297458_84297628_84298061
tx.12123	chr8	-	1158	13	FSM	ENSMUSG00000031708.18	ENSMUST00000019382.17	1158	13	2	-2	2	0	multi-exon	FALSE	canonical	3	3555	junction_3	302.48290814891	487	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	False	NA	NA	False	NA	NA	NA	84321104	84298326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
tx.12124	chr8	-	1114	12	FSM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	8	-2	1	0	multi-exon	FALSE	canonical	3	487	junction_9	1051.54616581631	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	False	NA	NA	False	NA	NA	NA	84321105	84298326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
tx.12125	chr8	+	2202	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	44	750	44	-750	multi-exon	FALSE	canonical	3	562	junction_2	45.5	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCAGTCCTTCGACTC	NA	False	NA	NA	False	NA	NA	NA	84334865	84338532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_84335172_84336442_84337024_84337217
tx.12126	chr8	+	3437	2	NIC	ENSMUSG00000005483.11	novel	2996	3	NA	NA	80	-750	intron_retention	FALSE	canonical	3	562	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCAGTCCTTCGACTC	NA	False	NA	NA	False	NA	NA	NA	84334901	84338532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_84337024_84337217
tx.12127	chr8	+	1635	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	-17	-96	-17	96	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	137	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCTCTCCCTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	84379288	84391419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
tx.12128	chr8	+	1529	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	56	71	-35	2	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	661	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGCTCCAGCCCCATC	NA	False	NA	NA	False	NA	NA	NA	84441861	84449906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
tx.12129	chr8	-	2879	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-10	-2	0	0	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACGTTTGCTGGTGAGA	NA	False	NA	NA	False	NA	NA	NA	84467812	84449990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
tx.12130	chr8	-	1200	6	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	16170	2	-190	0	3prime_fragment	FALSE	canonical	3	183	junction_3	19.2520128817742	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	84451628	84449992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397
tx.12131	chr8	+	1610	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	176	2	-31	-2	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTTTGCTTTTTTCTC	5892	False	NA	NA	False	NA	NA	NA	84682311	84696824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
tx.12132	chr8	+	2501	7	FSM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	-41	-8	-41	8	multi-exon	FALSE	canonical	3	12	junction_2	39.9110121255887	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	NA	False	NA	NA	NA	84748058	84756932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_84748158_84750980_84751030_84752822_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
tx.12133	chr8	+	2482	5	ISM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	4604	-18	0	18	3prime_fragment	FALSE	canonical	3	94	junction_2	4.49305018890286	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTATTTTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	84752703	84756942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
tx.12135	chr8	-	1097	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	-194	-269	-194	269	multi-exon	FALSE	canonical	3	87	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACGCGTGCGTATCAT	2654	False	NA	NA	False	NA	NA	NA	84771823	84769288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84769961_84771398
tx.12136	chr8	-	2213	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	-16	2	-11	-2	multi-exon	FALSE	canonical	3	169	junction_7	21.0218140669797	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGTCCTGTTCT	9246	False	NA	NA	False	NA	NA	NA	84831408	84823702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
tx.12137	chr8	+	2523	9	FSM	ENSMUSG00000008129.15	ENSMUST00000118856.8	2366	9	-156	-1	-22	1	multi-exon	TRUE	canonical	2	9	junction_1	4.49826355386165	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGATCTGTAGCTGTGC	1861	False	NA	NA	False	NA	NA	NA	84874631	84899220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
tx.12138	chr8	-	781	2	FSM	ENSMUSG00000056155.7	ENSMUST00000210202.2	692	2	-63	-26	-63	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCTTGGGACAAGGTG	NA	False	NA	NA	False	NA	NA	NA	84903244	84900361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84900602_84902703
tx.12139	chr8	-	622	3	NNC	ENSMUSG00000056155.7	novel	730	2	NA	NA	-7468	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCTTGGGACAAGGTG	NA	False	NA	NA	False	NA	NA	NA	84919314	84900361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_84900602_84918311_84918445_84919065
tx.1214	chr10	-	663	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	1	-3	0	0	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	NA	False	NA	NA	NA	95337801	95316666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
tx.12140	chr8	-	705	2	ISM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	0	-3	0	3	intron_retention	FALSE	canonical	3	1856	junction_1	0	12	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	9834	False	NA	NA	False	NA	NA	NA	84976348	84972863	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_84973323_84976102
tx.12141	chr8	-	619	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	0	-3	0	3	multi-exon	FALSE	canonical	3	1764	junction_2	46	172	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	9834	False	NA	NA	False	NA	NA	NA	84976348	84972863	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84973323_84976102_84976159_84976244
tx.12142	chr8	-	619	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	0	-3	0	3	multi-exon	FALSE	canonical	3	1764	junction_2	46	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	9834	False	NA	NA	False	NA	NA	NA	84976348	84972863	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84973323_84976102_84976159_84976244
tx.12143	chr8	-	1219	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	26	1574	26	-458	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATCTTCACCCACACTC	6992	False	NA	NA	False	NA	NA	NA	84983927	84978108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
tx.12145	chr8	-	1651	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	-33	501	-33	5	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTCTAAACTCATCT	NA	False	NA	NA	False	NA	NA	NA	84997042	84984924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
tx.12146	chr8	-	4220	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	NA	False	NA	NA	NA	85413780	85397107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
tx.12147	chr8	+	2129	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	417	21	0	0	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	NA	False	NA	NA	NA	85415911	85426416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
tx.12148	chr8	+	2034	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	11	-1	3	0	multi-exon	FALSE	canonical	3	38	junction_1	132.785409001705	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	NA	False	NA	NA	NA	85415903	85426416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
tx.12149	chr8	+	725	2	FSM	ENSMUSG00000074203.5	ENSMUST00000098571.5	721	2	0	-4	0	4	multi-exon	FALSE	canonical	2	3	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGCTCACATCTGTAA	NA	False	NA	NA	False	NA	NA	NA	85449635	85453477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85449901_85453017
tx.1215	chr10	+	1225	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	-8	2650	-8	1	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	260	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTTTGTACAGTTTA	NA	False	NA	NA	False	NA	NA	NA	95350998	95378869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
tx.12150	chr8	+	739	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	744	1011	744	-1011	multi-exon	FALSE	canonical	3	736	junction_1	0	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTCTCCCTCAAGTTGT	3418	False	NA	NA	False	NA	NA	NA	85558894	85561100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85559270_85560736
tx.12151	chr8	-	1813	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	-14	275	10	-16	multi-exon	TRUE	canonical	3	805	junction_3	189.238440862315	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTCATGCCTACTGG	NA	False	NA	NA	False	NA	NA	NA	85567284	85561555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
tx.12152	chr8	-	1814	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	9	19	9	-19	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATGGTTCATGCCTAC	NA	False	NA	NA	False	NA	NA	NA	85567285	85561558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
tx.12153	chr8	-	1878	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	65	241	-39	-241	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	1287	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	85573498	85568719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
tx.12154	chr8	+	1826	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_9	56.0676055212713	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	85583617	85595886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
tx.12155	chr8	+	616	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	9	60	9	-50	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	85598830	85614025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
tx.12156	chr8	+	767	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	94	825	12	-50	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	85598833	85614025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
tx.12157	chr8	+	1066	3	NIC	ENSMUSG00000003824.13	novel	685	4	NA	NA	25	-50	intron_retention	FALSE	canonical	3	832	junction_1	576	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	85598846	85614025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_85599462_85612563_85612753_85613763
tx.12158	chr8	+	1217	4	NIC	ENSMUSG00000003824.13	novel	929	5	NA	NA	28	-50	intron_retention	FALSE	canonical	3	1047	junction_1	431.92772029074	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	85598849	85614025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_85599462_85610059_85610214_85612563_85612753_85613763
tx.12159	chr8	-	1846	11	FSM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	133	188	133	-188	multi-exon	FALSE	canonical	3	233	junction_6	21.1293634546808	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	NA	False	NA	NA	NA	85620413	85613209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
tx.1216	chr10	-	2715	4	ISM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	11557	3	11557	-3	3prime_fragment	FALSE	canonical	3	479	junction_2	106.565577097965	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTATGTTTATTTTTAG	NA	False	NA	NA	False	NA	NA	NA	95388451	95382871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347
tx.12160	chr8	-	1920	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	6	188	2	-188	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	NA	False	NA	NA	NA	85620544	85613209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
tx.12161	chr8	+	1613	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	91	11	4	-3	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGACTAGTTTTGACT	NA	False	NA	NA	False	NA	NA	NA	85635279	85638087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
tx.12162	chr8	+	1176	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-55	-3	-55	3	multi-exon	FALSE	canonical	3	99	junction_1	1.5	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGAGTGGGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	85639964	85649547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85640158_85647022_85647134_85648675
tx.12163	chr8	+	447	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4619	202	-51	-202	3prime_fragment	FALSE	canonical	3	74	junction_1	0	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGGGGCTGGAGCCAT	NA	False	NA	NA	False	NA	NA	NA	85639968	85640948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_85640158_85640690
tx.12164	chr8	+	731	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-49	-7	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	0	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAAGCCTTTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	85639970	85641143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_85640158_85640599
tx.12165	chr8	-	1044	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-57	1057	-4	0	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	644	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	8226	False	NA	NA	False	NA	NA	NA	85692697	85684295	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
tx.12166	chr8	+	951	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	32	517	32	6	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	3375	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	85696271	85700946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
tx.12167	chr8	+	2434	16	FSM	ENSMUSG00000052566.9	ENSMUST00000210326.2	3080	16	-52	698	-13	-698	multi-exon	FALSE	canonical	3	335	junction_11	30.1194658356058	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTTGTGAGCCACCAT	NA	False	NA	NA	False	NA	NA	NA	85717218	85725637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832
tx.12168	chr8	+	2602	22	FSM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	-22	0	-8	0	multi-exon	FALSE	canonical	3	335	junction_11	39.7071479254288	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	NA	False	NA	NA	NA	85717223	85729978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
tx.12169	chr8	+	2591	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	0	0	intron_retention	TRUE	canonical	3	109	junction_18	72.710434300971	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	NA	False	NA	NA	NA	85717231	85729978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
tx.1217	chr10	+	692	3	FSM	ENSMUSG00000112188.2	ENSMUST00000219583.2	670	3	-12	-10	-12	7	multi-exon	FALSE	canonical	3	30	junction_1	1	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTAGGTGTTTATTCA	3208	False	NA	NA	False	NA	NA	NA	95567076	95575225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_95567365_95570676_95570791_95574935
tx.12170	chr8	-	1296	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	109	junction_5	750.461950327189	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8425	False	NA	NA	False	NA	NA	NA	85751885	85744559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746603_85750806_85750955_85751733
tx.12171	chr8	-	1258	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	-2	0	-2	0	multi-exon	FALSE	canonical	1	664	junction_3	477.58303524681	626	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8398	False	NA	NA	False	NA	NA	NA	85751912	85744559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
tx.12172	chr8	+	865	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	37	0	37	0	multi-exon	FALSE	canonical	3	920	junction_1	163	209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	85753488	85756915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85753864_85756167_85756246_85756503
tx.12173	chr8	+	483	2	ISM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	2723	0	2723	0	3prime_fragment	FALSE	canonical	3	1246	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	85756174	85756915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_85756246_85756503
tx.12174	chr8	+	1865	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	42	0	0	0	multi-exon	TRUE	canonical	3	54	junction_4	11.5864970366477	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	85786725	85793750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
tx.12175	chr8	+	1338	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	-5	0	-5	0	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	85798380	85801791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
tx.12176	chr8	+	1292	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	439	0	-105	0	3prime_fragment	FALSE	canonical	3	191	junction_1	37.2788718406859	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	85798824	85801791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
tx.12177	chr8	-	1196	9	FSM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	42	0	-1	0	multi-exon	FALSE	canonical	3	89	junction_6	13.3410784796432	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTCTTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	85807333	85801663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
tx.12178	chr8	-	834	7	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	566	4	-265	-1	3prime_fragment	FALSE	canonical	3	89	junction_6	14.5420845212171	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCTTCTTAGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	85806809	85801667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748
tx.12179	chr8	+	697	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	222	3	-11	-3	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	345	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTTGCTTCTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	85807590	85808965	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
tx.1218	chr10	+	2023	5	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	-1090	618	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	53.3777809579979	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAACTCAGAATATCAT	NA	False	NA	NA	False	NA	NA	NA	95728214	95733737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_95728602_95729113_95729296_95729415_95729523_95729968_95730152_95732573
tx.12180	chr8	+	3176	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	-41	687	4	-687	multi-exon	FALSE	canonical	3	158	junction_7	31.1019422681999	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCACTATCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	85809902	85824224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
tx.12181	chr8	-	3189	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	285	0	-48	0	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	86026146	85987020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
tx.12182	chr8	+	1177	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	117	-7	-15	7	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	329	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGAGTATTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	86026536	86034707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
tx.12183	chr8	-	1472	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	20	95	1	-95	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTAGTGTGGTGTAG	NA	False	NA	NA	False	NA	NA	NA	86159442	86135482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
tx.12184	chr8	+	3343	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	1	295	1	-295	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAGTAGGATGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	86219205	86253894	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
tx.12185	chr8	+	2174	4	FSM	ENSMUSG00000031700.12	ENSMUST00000143846.2	628	4	39	-1585	39	-295	multi-exon	FALSE	canonical	3	925	junction_1	34.3931517731203	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAGTAGGATGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	86246076	86253894	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_86246252_86247967_86248124_86249884_86249998_86252164
tx.12186	chr8	-	1592	7	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	2033	993	155	-993	3prime_fragment	FALSE	canonical	3	694	junction_1	59.8843793395981	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTCACATTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	86279940	86265254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815
tx.12187	chr8	-	1923	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	3	993	3	-993	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	627	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTCACATTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	86281970	86265254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
tx.12188	chr8	-	2180	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	165	961	165	-961	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCCAGGGCGTTGTT	NA	False	NA	NA	False	NA	NA	NA	86567385	86445167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
tx.12189	chr8	+	2837	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	27	-5	27	4	multi-exon	TRUE	canonical	3	174	junction_5	34.038693468775	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTCTCCAGTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	87350698	87443264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
tx.1219	chr10	+	1146	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	38	331	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	59.5	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCAGCTGTCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	95729342	95733450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_95729523_95730062_95730152_95732573
tx.12190	chr8	-	2013	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	29	-74	29	74	multi-exon	FALSE	canonical	3	375	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTTACTTTAGC	91	False	NA	NA	False	NA	NA	NA	87472533	87450560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_87452485_87472444
tx.12191	chr8	+	522	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182174.8	498	4	-23	-1	-23	0	multi-exon	FALSE	canonical	3	132	junction_1	31.0590834807897	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	175	False	NA	NA	False	NA	NA	NA	88199416	88252182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88252042
tx.12192	chr8	+	470	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182758.2	447	4	-23	0	-5	0	multi-exon	FALSE	canonical	3	44	junction_1	69.6866000191014	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	204	False	NA	NA	False	NA	NA	NA	88199738	88252182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_88199859_88248363_88248442_88250923_88251056_88252042
tx.12193	chr8	+	1748	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	-13	-4	-13	0	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGGTTAGAGATTTTCT	NA	False	NA	NA	False	NA	NA	NA	88845383	88861738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
tx.12194	chr8	+	3247	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	4	0	3	0	multi-exon	FALSE	canonical	3	239	junction_7	19.6926641267291	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTCATACAGATT	NA	False	NA	NA	False	NA	NA	NA	88864486	88898655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
tx.12195	chr8	+	2917	14	ISM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	451	0	450	0	3prime_fragment	FALSE	canonical	3	239	junction_6	18.9427664919057	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTCATACAGATT	NA	False	NA	NA	False	NA	NA	NA	88864933	88898655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
tx.12196	chr8	-	2158	17	NIC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	38	476	combination_of_known_junctions	FALSE	canonical	3	37	junction_4	122.717663765246	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	NA	False	NA	NA	NA	89088604	89058938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060848_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
tx.12197	chr8	-	2164	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	209	1252	29	476	multi-exon	TRUE	canonical	3	463	junction_12	36.2439650148821	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	NA	False	NA	NA	NA	89088613	89058938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
tx.12198	chr8	+	4521	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	-11	-34	3	34	multi-exon	TRUE	canonical	3	35	junction_1	10.7172466146861	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTCCTTGGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	89423691	89475117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
tx.12199	chr8	+	2045	3	Antisense	novelGene_ENSMUSG00000031665.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	16	junction_1	4	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGTTGGATTGGAATAT	NA	False	NA	NA	False	NA	NA	NA	89768320	89797647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr8_+_89768425_89784011_89784080_89795774
tx.122	chr1	-	4972	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	526	0	526	0	multi-exon	TRUE	canonical	3	237	junction_4	21.0736509753792	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	454	False	NA	NA	False	NA	NA	NA	46892680	46846703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
tx.1220	chr10	+	1556	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	38	616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.5	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAGAAACTCAGAATATC	NA	False	NA	NA	False	NA	NA	NA	95729342	95733735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_95729523_95729937_95730152_95732573
tx.12200	chr8	-	2419	5	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_1	27.8511669414407	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCATTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	89779679	89772259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89779508
tx.12201	chr8	-	1313	3	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	28.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTCATGTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	89779661	89774451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_-_89775532_89776215_89776356_89779568
tx.12202	chr8	-	2064	2	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	144	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTCATGTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	89779668	89774451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_-_89776356_89779508
tx.12203	chr8	-	1386	3	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	120	junction_1	12	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTCATGTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	89779674	89774451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_-_89775532_89776215_89776356_89779508
tx.12204	chr8	+	407	2	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCTTCATAAATAATCCT	3408	False	NA	NA	False	NA	NA	NA	89779838	89784300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_89779957_89784011
tx.12205	chr8	-	1824	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	-13	389	13	-319	multi-exon	FALSE	canonical	3	60	junction_9	146.200581394193	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	NA	False	NA	NA	NA	91860638	91850515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
tx.12206	chr8	-	1745	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	15	319	11	-319	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	NA	False	NA	NA	NA	91860640	91850515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
tx.12207	chr8	-	486	3	ISM	ENSMUSG00000033282.15	ENSMUST00000139113.8	5046	26	-35	88892	5	141	5prime_fragment	FALSE	canonical	3	21	junction_2	3	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTGCCATTTGAAAGA	NA	False	NA	NA	False	NA	NA	NA	92039885	92034475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_92034815_92036965_92037058_92039830
tx.12208	chr8	+	1152	6	ISM	ENSMUSG00000055932.16	ENSMUST00000136802.8	3751	7	-33	13338	0	6062	5prime_fragment	FALSE	canonical	3	247	junction_3	27.7229147096765	46	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTCCTCAGGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	92040162	92201081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936
tx.12209	chr8	+	443	4	ISM	ENSMUSG00000055932.16	ENSMUST00000136802.8	3751	7	96200	13338	19213	6062	internal_fragment	FALSE	canonical	3	247	junction_1	32.4448249597169	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTCCTCAGGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	92136395	92201081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_92136470_92168290_92168435_92194944_92195025_92200936
tx.1221	chr10	+	1522	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	43	618	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	59	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAACTCAGAATATCAT	NA	False	NA	NA	False	NA	NA	NA	95729347	95733737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_95729523_95729968_95730152_95732573
tx.12210	chr8	+	2836	7	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	96243	9	19213	-9	3prime_fragment	FALSE	canonical	3	202	junction_5	42.6044468205948	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTAAGAGCGTCCGTG	NA	False	NA	NA	False	NA	NA	NA	92136395	92395058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
tx.12211	chr8	-	1093	6	NIC	ENSMUSG00000031736.12	novel	1238	7	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_4	5.31413210223457	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGTTTGTGTAATGG	NA	False	NA	NA	False	NA	NA	NA	93082478	93052660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_93053091_93071480_93071668_93072977_93073092_93073411_93073547_93077318_93077383_93082315
tx.12212	chr8	+	3031	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	47	0	47	0	multi-exon	FALSE	canonical	3	12	junction_9	5.63964143856288	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTGTTTTAGC	NA	False	NA	NA	False	NA	NA	NA	93553965	93580048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
tx.12213	chr8	+	2030	14	FSM	ENSMUSG00000033192.6	ENSMUST00000046290.3	2811	14	8	773	8	-317	multi-exon	TRUE	canonical	2	3	junction_10	2.47591952914324	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGTCAGCAATTAATCAA	NA	False	NA	NA	False	NA	NA	NA	93581974	93645134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93641007_93644662
tx.12214	chr8	-	1091	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	10	3909	10	0	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	1023	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGAGGATCCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	94763649	94746032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
tx.12215	chr8	+	2403	3	NNC	ENSMUSG00000033009.16	novel	718	7	NA	NA	-9	4326	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	80	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	94763856	94770406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_94764071_94765592_94765739_94768363
tx.12216	chr8	+	2011	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	48	3251	8	-3251	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCGTTCTGTAGTAA	NA	False	NA	NA	False	NA	NA	NA	94763873	94791298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
tx.12217	chr8	+	410	3	FSM	ENSMUSG00000031757.8	ENSMUST00000034207.8	398	3	-11	-1	-11	1	multi-exon	FALSE	canonical	1	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGGCTCAGAGTATT	6270	False	NA	NA	False	NA	NA	NA	94863813	94865660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_94863901_94864858_94864925_94865403
tx.12218	chr8	+	405	3	FSM	ENSMUSG00000031760.10	ENSMUST00000034211.10	536	3	133	-2	-6	2	multi-exon	FALSE	canonical	3	14	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGACTGGTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	94879367	94880776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_94879459_94879652_94879719_94880528
tx.12219	chr8	+	389	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	118	4	-78	0	multi-exon	FALSE	canonical	3	13494	junction_2	132	6535	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTTGTCTCTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	94899409	94900192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_94899504_94899754_94899821_94899963
tx.1222	chr10	+	1289	6	NIC	ENSMUSG00000019943.11	novel	1249	4	NA	NA	245	2733	combination_of_known_junctions	FALSE	canonical	3	240	junction_3	8.61626369141521	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTAGGTGTGGCGGTT	NA	False	NA	NA	False	NA	NA	NA	98750512	98827059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923
tx.12220	chr8	+	437	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	112	0	-17	0	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	8489	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	94905821	94906955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_94905967_94906450_94906517_94906729
tx.12221	chr8	+	2698	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	9	0	-4	0	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	94941200	95041488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
tx.12222	chr8	+	2748	23	FSM	ENSMUSG00000032939.15	ENSMUST00000212824.2	2928	23	-26	206	-2	0	multi-exon	FALSE	canonical	3	35	junction_1	328.081966678305	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	94941202	95041488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
tx.12223	chr8	+	1934	8	FSM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	5	13	5	0	multi-exon	FALSE	canonical	3	396	junction_6	55.7864002152818	155	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCCATTGTCCTGGCAA	NA	False	NA	NA	False	NA	NA	NA	95113070	95121992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
tx.12224	chr8	-	1669	7	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	0	717	intron_retention	FALSE	non_canonical	0	0	junction_3	218.907451271587	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3895	False	NA	NA	False	NA	NA	NA	95328320	95301567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95328124
tx.12225	chr8	-	1776	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-1	717	intron_retention	FALSE	non_canonical	0	0	junction_3	171.915855070118	181	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3885	False	NA	NA	False	NA	NA	NA	95328330	95301567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
tx.12226	chr8	-	1711	9	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-8	717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	197.424036023986	46	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3853	False	NA	NA	False	NA	NA	NA	95328362	95301567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124_95328213_95328309
tx.12227	chr8	+	3651	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	9	192	9	-192	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGATCTCCTTCCTGGCTG	8120	False	NA	NA	False	NA	NA	NA	95328573	95386711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
tx.12228	chr8	+	1929	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	134	0	10	0	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	False	NA	NA	False	NA	NA	NA	95393361	95401053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
tx.12229	chr8	-	1504	8	ISM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	5563	-7	-7	7	3prime_fragment	FALSE	canonical	3	1537	junction_1	133.441265838463	404	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGAGTGTGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	95559330	95549181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142
tx.1223	chr10	+	2906	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	40	-84	-6	-2	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAATGTCTTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	98942937	99033934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
tx.12230	chr8	-	1557	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	52	2750	-41	7	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	845	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGAGTGTGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	95564934	95549181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
tx.12231	chr8	+	1711	9	FSM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	78	0	-4	0	multi-exon	FALSE	canonical	3	145	junction_5	12.7322179921646	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	95565026	95581523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
tx.12232	chr8	+	1182	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	68	330	0	171	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	1153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGCGTCATCGTGCCAC	NA	False	NA	NA	False	NA	NA	NA	95584145	95590540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
tx.12233	chr8	+	2565	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	60	1152	60	-1152	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTTATGAGAGGAATAT	869	False	NA	NA	False	NA	NA	NA	95807873	95825687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
tx.12234	chr8	+	659	4	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	73	-6790	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	67.6609192961491	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGCTTGGTTATTTCA	882	False	NA	NA	False	NA	NA	NA	95807886	95814673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_95807933_95809225_95809522_95813915_95814047_95814487
tx.12235	chr8	+	1743	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	17	-2	-2	2	multi-exon	FALSE	canonical	3	182	junction_6	19.6185852927495	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGTCTTATTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	96058928	96074137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
tx.12236	chr8	+	1719	7	NNC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	68.6601938696813	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGTCTTATTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	96058931	96074137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_96059094_96059995_96060163_96065261_96065446_96069770_96069804_96070584_96070691_96071916_96072001_96073154
tx.12237	chr8	-	1268	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	27	0	2	0	multi-exon	FALSE	canonical	3	468	junction_1	23.7200337267888	239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	96161470	96146876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
tx.12238	chr8	-	488	2	ISM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	35437	1876	7324	2	3prime_fragment	FALSE	canonical	3	171	junction_1	0	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGGAGCGTATTTAGT	NA	False	NA	-98	True	NA	NA	NA	96180018	96174599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_96175047_96179977
tx.12239	chr8	-	1912	10	ISM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	600	4934	-143	459	3prime_fragment	FALSE	canonical	3	275	junction_8	20.1720990540626	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATTAAAACAGTGACAGTA	NA	False	NA	NA	False	NA	NA	NA	96214808	96179535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192
tx.1224	chr10	+	1273	2	Genic_Genomic	ENSMUSG00000091101.3	novel	927	1	NA	NA	-995	270	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTCTAGAGTCATAA	NA	False	NA	NA	False	NA	NA	NA	100175702	100177894	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr10_+_100175773_100176691
tx.12240	chr8	+	1271	9	FSM	ENSMUSG00000036598.5	ENSMUST00000041569.5	1288	9	17	0	17	0	multi-exon	FALSE	canonical	2	7	junction_1	2.77263412660235	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCCTCTCACTTGTTG	NA	False	NA	NA	False	NA	NA	NA	96260729	96285518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_96260901_96263092_96263220_96264719_96264882_96267426_96267583_96269249_96269331_96272521_96272678_96277824_96277933_96283818_96283975_96285364
tx.12241	chr8	+	2461	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	56	2	-45	-2	multi-exon	FALSE	canonical	3	97	junction_2	2	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGTGTTGTCACTAAC	NA	False	NA	NA	False	NA	NA	NA	96360136	96371686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_96360412_96364437_96364672_96369734
tx.12242	chr8	+	2790	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	-52	0	-26	0	multi-exon	FALSE	canonical	3	13	junction_5	6.1711295754251	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	False	NA	NA	False	NA	NA	NA	96429638	96441584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
tx.12243	chr8	+	2004	4	NNC	ENSMUSG00000036564.18	novel	3101	17	NA	NA	299	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	14.4452991200136	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	False	NA	NA	False	NA	NA	NA	96437392	96441584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_96437424_96437455_96437598_96437720_96437773_96439805
tx.12244	chr8	+	1365	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-4	-5	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	132.221720353856	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCAAACTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	96442538	96445633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_96442592_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
tx.12246	chr8	+	1219	3	ISM	ENSMUSG00000031671.12	ENSMUST00000154593.2	774	4	547	-134	547	-5	3prime_fragment	FALSE	canonical	3	366	junction_1	31	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCAAACTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	96444183	96445633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_96444730_96444820_96444964_96445103
tx.12247	chr8	-	2700	16	ISM	ENSMUSG00000036550.17	ENSMUST00000211887.2	8364	49	67543	694	-100	4	3prime_fragment	FALSE	canonical	3	1077	junction_10	231.11084401694	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAAACTTCTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	96466549	96446779	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435
tx.12248	chr8	-	353	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212289.2	338	3	-21	6	-8	-6	multi-exon	FALSE	canonical	0	0	junction_1	187	82	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTTCAAATAGTACT	NA	False	NA	NA	False	NA	NA	NA	96544327	96535185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_96535388_96539051_96539129_96544253
tx.12249	chr8	-	2207	5	ISM	ENSMUSG00000036534.7	ENSMUST00000040481.4	3333	12	9728	0	42	0	3prime_fragment	FALSE	canonical	3	259	junction_3	48.9974489131832	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	NA	False	NA	NA	NA	96570439	96562547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387
tx.1225	chr10	+	1273	2	Genic_Genomic	ENSMUSG00000091552.3	novel	883	1	NA	NA	-6096	297	multi-exon	FALSE	canonical	2	11	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAGAGTCATAAAGTCTA	NA	False	NA	NA	False	NA	NA	NA	100186000	100193276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr10_+_100186070_100192072
tx.12250	chr8	-	3293	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	26	-4	9	0	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	NA	False	NA	NA	NA	96580141	96562547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
tx.12251	chr8	-	2383	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	146	1	-9	-1	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	303	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTCTGCTTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	96615029	96590762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
tx.12252	chr8	-	2307	9	FSM	ENSMUSG00000035824.8	ENSMUST00000211995.2	2312	9	7	-2	4	0	multi-exon	FALSE	canonical	3	18	junction_4	19.1012924955355	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAAATTCATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	104975176	104953327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
tx.12253	chr8	-	2387	10	FSM	ENSMUSG00000035824.8	ENSMUST00000050211.7	2406	10	7	12	0	-1	multi-exon	FALSE	canonical	3	48	junction_4	11.1055541659718	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTAAATTCATTTTCAT	NA	False	NA	NA	False	NA	NA	NA	104975183	104953328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
tx.12254	chr8	+	625	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	42	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	21.1397466609439	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCAGATCTCCTT	4834	False	NA	NA	False	NA	NA	NA	104977534	104990079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
tx.12255	chr8	+	851	2	FSM	ENSMUSG00000054400.17	ENSMUST00000212433.2	1304	2	27	426	6	-426	multi-exon	FALSE	canonical	3	282	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGAAAGATCCTTTTC	4840	False	NA	NA	False	NA	NA	NA	104977540	104984580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_104977728_104983916
tx.12256	chr8	+	1579	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	37	0	37	0	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	NA	False	NA	NA	NA	105067262	105074304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
tx.12257	chr8	-	1642	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	234	2751	-69	-36	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTGTGAGATGCACATTT	2002	False	NA	NA	False	NA	NA	NA	105169445	105147062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
tx.12258	chr8	-	1789	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	19	0	-4	0	multi-exon	FALSE	canonical	3	645	junction_15	52.7352662859429	370	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3352	False	NA	NA	False	NA	NA	NA	105261250	105237659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
tx.12259	chr8	-	1712	19	FSM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	23	0	1	0	multi-exon	FALSE	canonical	3	78	junction_15	163.229558869982	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3357	False	NA	NA	False	NA	NA	NA	105261245	105237659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
tx.1226	chr10	-	1176	2	Genic_Genomic	ENSMUSG00000096640.4	novel	914	1	NA	NA	-996	185	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGGTAAATTGTAGT	NA	False	NA	NA	False	NA	NA	NA	100219418	100217323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr10_-_100218428_100219346
tx.12260	chr8	+	2177	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	13	3502	13	-3502	multi-exon	FALSE	canonical	3	69	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGACCCAGTTGCAGAT	NA	False	NA	NA	False	NA	NA	NA	105318095	105322156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_105318228_105320111
tx.12261	chr8	-	817	4	FSM	ENSMUSG00000031879.15	ENSMUST00000163140.2	807	4	-9	-1	-7	1	multi-exon	FALSE	canonical	3	675	junction_1	52.8288641642889	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTAGCGTCTCTCAT	NA	False	NA	NA	False	NA	NA	NA	105368340	105366471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942
tx.12262	chr8	+	2620	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	263	0	-8	0	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	4009	False	NA	NA	False	NA	NA	NA	105897568	105944621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
tx.12263	chr8	+	2651	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	248	-8	-8	0	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	4009	False	NA	NA	False	NA	NA	NA	105897568	105944621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
tx.12264	chr8	+	2874	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	42	0	-19	0	multi-exon	TRUE	canonical	3	239	junction_9	14.7126551724093	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	NA	NA	NA	105951818	105979685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
tx.12265	chr8	-	1642	4	ISM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	3927	0	-562	0	3prime_fragment	FALSE	canonical	3	66	junction_1	4.96655480858378	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTGCACGCCTTTAAT	4432	False	NA	NA	False	NA	NA	NA	105987314	105984917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153
tx.12266	chr8	-	1414	2	ISM	ENSMUSG00000031887.14	ENSMUST00000136239.2	710	3	280	-904	280	0	intron_retention	FALSE	canonical	3	66	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTGCACGCCTTTAAT	5274	False	NA	NA	False	NA	NA	NA	105986472	105984917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_105985928_105986068
tx.12267	chr8	-	1405	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	0	284	0	-284	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGGAGATGCTGAGGTC	505	False	NA	NA	False	NA	NA	NA	105991241	105985201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
tx.12268	chr8	-	3138	7	FSM	ENSMUSG00000014837.16	ENSMUST00000014981.8	3492	7	354	0	-6	0	multi-exon	FALSE	canonical	3	11	junction_6	11.0302614051829	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	False	NA	NA	False	NA	NA	NA	106016142	106007040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106016035
tx.12269	chr8	-	2282	4	NNC	ENSMUSG00000014837.16	novel	3313	7	NA	NA	5306	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	18.6607133363712	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGGCTTCTGTC	1070	False	NA	NA	False	NA	NA	NA	106010376	106007043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_106008777_106009618_106009717_106009806_106010113_106010231
tx.1227	chr10	-	2421	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	137	6	-10	-6	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAGTGTGAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	100425120	100408132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
tx.12270	chr8	-	1315	7	NNC	ENSMUSG00000014837.16	novel	3492	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	14.1037819986934	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGGCTTTGGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	106016133	106008315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106011963_106016035
tx.12271	chr8	+	1939	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	54	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	369.398142461925	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	106024348	106032002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
tx.12272	chr8	+	1668	8	ISM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	874	0	820	0	3prime_fragment	FALSE	canonical	0	0	junction_1	395.215466936863	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	106025168	106032002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
tx.12273	chr8	+	924	5	FSM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	-24	-5	2	0	multi-exon	FALSE	canonical	3	392	junction_2	13.1909059582729	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	261	False	NA	NA	False	NA	NA	NA	106052995	106055689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055325_106055403
tx.12274	chr8	+	774	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	11	0	3	0	multi-exon	FALSE	canonical	3	269	junction_4	56.0556865982391	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	262	False	NA	NA	False	NA	NA	NA	106052996	106055689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
tx.12275	chr8	-	994	4	FSM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	134	-1	134	1	multi-exon	FALSE	canonical	2	4	junction_3	3.55902608401044	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGACTCAGTCTACAG	NA	False	NA	NA	False	NA	NA	NA	106198024	106194123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197911
tx.12276	chr8	-	1646	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	-15	-2	-15	2	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTCTGCTCCCT	NA	False	NA	NA	False	NA	NA	NA	106292694	106251094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
tx.12277	chr8	+	3368	10	ISM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	27330	0	-12102	0	3prime_fragment	FALSE	canonical	3	206	junction_8	80.3768899898749	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	106390540	106409554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
tx.12278	chr8	+	3381	10	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-12118	0	combination_of_known_junctions	FALSE	canonical	3	229	junction_8	74.0286898005108	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	106390524	106409554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
tx.12279	chr8	+	1652	8	ISM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	27330	5611	-12102	-2256	internal_fragment	FALSE	canonical	3	388	junction_1	40.9240211881003	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGATGCGATCTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106390540	106403943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846
tx.1228	chr10	+	1427	5	ISM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-98	24003	-73	-1786	5prime_fragment	FALSE	canonical	3	31	junction_1	35.7596140918774	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTATCATTTATAGTAA	NA	False	NA	NA	False	NA	NA	NA	103203570	103231233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850
tx.12280	chr8	-	1377	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_8	60.9681155286196	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	NA	False	NA	NA	NA	106427727	106424788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106427035_106427334_106427472_106427551
tx.12281	chr8	-	1427	11	FSM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	-11	1738	7	0	multi-exon	FALSE	canonical	3	179	junction_7	13.7637204272682	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	NA	False	NA	NA	NA	106427727	106424788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
tx.12282	chr8	+	1250	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212634.2	678	3	-1	-571	-1	1	multi-exon	FALSE	canonical	0	0	junction_1	13	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	106427778	106430126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106427919_106428805_106429029_106429239
tx.12283	chr8	+	1247	3	NIC	ENSMUSG00000005699.17	novel	1234	3	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	106427778	106430126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_106427919_106428805_106429029_106429242
tx.12284	chr8	+	1268	3	FSM	ENSMUSG00000005699.17	ENSMUST00000098444.9	1273	3	6	-1	6	1	multi-exon	FALSE	canonical	2	20	junction_1	3	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	106427791	106430126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106427950_106428805_106429029_106429239
tx.12285	chr8	+	1269	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212352.2	1234	3	-31	-4	2	1	multi-exon	FALSE	canonical	2	20	junction_1	6.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	106427787	106430126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106427950_106428805_106429029_106429242
tx.12286	chr8	-	1499	7	FSM	ENSMUSG00000013155.11	ENSMUST00000013299.11	1275	7	-221	-3	-9	2	multi-exon	FALSE	canonical	3	158	junction_2	11.5854314646552	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	106434786	106430280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455
tx.12287	chr8	-	1379	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_7	49.3529562003563	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	106434786	106430280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434675
tx.12288	chr8	-	1302	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_7	45.9436211734623	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCCATAGGAGCT	NA	False	NA	NA	False	NA	NA	NA	106434823	106430281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434788
tx.12289	chr8	-	2065	3	FSM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	31	2256	-3	1307	multi-exon	FALSE	canonical	3	21	junction_1	4	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATGGTGTGTGGTCGTT	NA	False	NA	NA	False	NA	NA	NA	106485265	106442741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106444283_106454619_106454964_106485085
tx.1229	chr10	+	1490	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-6	-1786	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTATCATTTATAGTAA	NA	False	NA	NA	False	NA	NA	NA	103203637	103231233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
tx.12290	chr8	-	1776	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	46	-8	0	4	multi-exon	FALSE	canonical	3	157	junction_3	25.0593739391514	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCGATATTGTATTTCT	NA	False	NA	NA	False	NA	NA	NA	106578640	106571300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
tx.12291	chr8	+	926	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	36	-14	5	14	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTAATTAGTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	106587247	106605976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
tx.12292	chr8	+	3292	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	-12	-25	-12	25	multi-exon	FALSE	canonical	3	44	junction_1	10	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGACTGTGCCATGGG	NA	False	NA	NA	False	NA	NA	NA	106627060	106658435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106627173_106639251_106640279_106656282
tx.12293	chr8	-	635	3	FSM	ENSMUSG00000031897.10	ENSMUST00000212938.2	646	3	24	-13	22	4	multi-exon	FALSE	canonical	3	246	junction_1	9	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAAGGCTGTGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	106663635	106662362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106662538_106662627_106662780_106663327
tx.12294	chr8	-	535	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212686.2	554	4	24	-5	11	4	multi-exon	FALSE	canonical	3	157	junction_3	46.7784375778224	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAAGGCTGTGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	106663646	106662362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497
tx.12295	chr8	-	1156	8	FSM	ENSMUSG00000031897.10	ENSMUST00000034369.10	1311	8	163	-8	163	4	multi-exon	FALSE	canonical	1	3	junction_7	110.839468399582	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAAGGCTGTGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	106664913	106662362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497_106663614_106663872_106664014_106664125_106664224_106664310_106664399_106664586
tx.12296	chr8	-	1717	10	FSM	ENSMUSG00000031898.10	ENSMUST00000034371.9	1698	10	-25	6	-25	-6	multi-exon	FALSE	canonical	3	28	junction_5	8.79955105476592	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAAGTGTCTGAGCCCTC	NA	False	NA	NA	False	NA	NA	NA	106706086	106700150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106700484_106701326_106701463_106701813_106701890_106702751_106702837_106703892_106704070_106704191_106704262_106704531_106704674_106704773_106704904_106705343_106705471_106705645
tx.12297	chr8	+	1890	16	FSM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	-24	-6	-24	6	multi-exon	FALSE	canonical	3	148	junction_9	22.4047613987146	158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCTTCAACCTTACATC	NA	False	NA	NA	False	NA	NA	NA	106738114	106780457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
tx.12298	chr8	-	2542	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	132	862	-29	-862	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGCCTGTGTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	106863474	106857812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
tx.12299	chr8	+	1220	2	FSM	ENSMUSG00000086390.8	ENSMUST00000145343.2	984	2	-38	-198	-38	198	multi-exon	FALSE	canonical	2	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATTTTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	106863658	106865355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106863983_106864459
tx.123	chr1	-	2838	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	8.25590697622012	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	False	NA	NA	False	NA	NA	NA	51517558	51508646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
tx.1230	chr10	+	1079	5	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	382	-1786	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	41.1969355656461	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTATCATTTATAGTAA	NA	False	NA	NA	False	NA	NA	NA	103204085	103231233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850
tx.12300	chr8	+	2735	6	FSM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	-29	0	-29	0	multi-exon	FALSE	canonical	3	107	junction_2	8.49941174435031	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTCCTGCTCTGA	6168	False	NA	NA	False	NA	NA	NA	106877001	106891347	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887715_106887941_106889456
tx.12301	chr8	+	2490	9	NIC	ENSMUSG00000031904.6	novel	2672	11	NA	NA	0	178	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	163.001485806112	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGGAATGTTCTACA	1850	False	NA	NA	False	NA	NA	NA	106895506	106924655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_106895587_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
tx.12302	chr8	+	3047	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	20	683	2	178	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGGAATGTTCTACA	1852	False	NA	NA	False	NA	NA	NA	106895508	106924655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
tx.12303	chr8	+	1981	10	NNC	ENSMUSG00000031904.6	novel	359	3	NA	NA	45	-578	intron_retention	FALSE	canonical	2	13	junction_1	155.047662922657	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTGTAGTTTAAACCA	2126	False	NA	NA	False	NA	NA	NA	106895782	106923561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_106895889_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
tx.12304	chr8	-	830	2	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	8585	-279	8577	279	3prime_fragment	FALSE	canonical	3	127	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCAGTTCTTTTTTAGA	6609	False	NA	-46	True	NA	NA	NA	106928980	106927069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_106927782_106928862
tx.12305	chr8	-	1525	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	0	-279	0	279	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCAGTTCTTTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	106937565	106927069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
tx.12306	chr8	-	1614	4	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-2	-279	0	279	intron_retention	FALSE	canonical	3	127	junction_1	3.29983164553722	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCAGTTCTTTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	106937567	106927069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996
tx.12307	chr8	+	2285	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	87	1100	0	-1100	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	674	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTGGCTCAATGGGG	1906	False	NA	NA	False	NA	NA	NA	106937654	106978326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
tx.12308	chr8	+	3224	16	FSM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	-12	1172	-12	-1172	multi-exon	FALSE	canonical	3	35	junction_1	6.02218122167265	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGCTAGGGGAGTGGAT	NA	False	NA	NA	False	NA	NA	NA	107237510	107282757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_107237639_107237855_107237974_107262039_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
tx.12309	chr8	+	4409	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	17	4	-11	-4	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGAGGCTCACTTGA	5066	False	NA	NA	False	NA	NA	NA	107329999	107396874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
tx.1231	chr10	+	2148	5	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	382	-847	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	44.144648599802	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTAATATATTTTCT	NA	False	NA	NA	False	NA	NA	NA	103204085	103232172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_103204182_103224757_103225203_103229251_103229410_103229761_103229889_103230850
tx.12310	chr8	+	2238	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	-3	-3	-3	3	multi-exon	TRUE	canonical	3	1046	junction_1	100.936996902771	621	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACATTTTAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	107620279	107649723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
tx.12311	chr8	+	1419	11	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	12488	-3	11550	3	3prime_fragment	FALSE	canonical	3	1133	junction_3	90.3628795468582	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACATTTTAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	107632770	107649723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
tx.12312	chr8	+	2081	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	98	-1	98	1	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGAGTCGTCTCATT	NA	False	NA	NA	False	NA	NA	NA	107757951	107772388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
tx.12313	chr8	-	1492	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	45	-231	45	231	multi-exon	FALSE	canonical	3	275	junction_1	0	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTGGTAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	107775201	107772920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_107773904_107774692
tx.12314	chr8	-	2051	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	5	2420	0	-2414	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	107783316	107775340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
tx.12315	chr8	+	1131	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	13	1892	-11	373	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	836	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATATGTGTGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	107783521	107785671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
tx.12316	chr8	+	944	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	2	3370	2	-1889	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	533	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTTGTCATTCATCA	NA	False	NA	NA	False	NA	NA	NA	107877273	107910733	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
tx.12317	chr8	-	1610	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	-56	-1	-56	1	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGGCGCATGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	108129894	108114855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
tx.12318	chr8	-	1663	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	-2	-3	0	0	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGTTTTATTTGGG	NA	False	NA	NA	False	NA	NA	NA	108151683	108139117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
tx.12319	chr8	+	2932	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	0	1382	0	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	108162996	108283845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
tx.1232	chr10	+	1135	2	FSM	ENSMUSG00000095022.9	ENSMUST00000181703.8	1246	2	-3	114	-3	-114	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATTTTGTGGATAAAT	NA	False	NA	NA	False	NA	NA	NA	104021390	104023747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_104021500_104022721
tx.12320	chr8	-	1568	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	14	-1	8	1	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	2585	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCTAGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	108315082	108307011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
tx.12321	chr8	+	708	2	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACGAGAAGTGCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	108323705	108325879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_108323854_108325319
tx.12322	chr8	-	1563	2	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGGAATCTTCACAGGC	NA	False	NA	NA	False	NA	NA	NA	108408873	108405376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_-_108406856_108408789
tx.12323	chr8	-	894	3	ISM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	13629	0	-44	0	3prime_fragment	FALSE	canonical	1	150	junction_2	160.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	False	NA	NA	False	NA	NA	NA	110321626	110320108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_110320764_110321251_110321412_110321547
tx.12324	chr8	-	1696	8	ISM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	2274	0	-117	0	3prime_fragment	FALSE	canonical	1	150	junction_2	112.923307910226	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	False	NA	NA	False	NA	NA	NA	110332981	110320108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839
tx.12325	chr8	-	1819	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	220	0	17	0	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	False	NA	NA	False	NA	NA	NA	110335035	110320108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
tx.12326	chr8	+	1246	7	ISM	ENSMUSG00000048827.13	ENSMUST00000212545.2	2450	16	14530	3488	14530	177	internal_fragment	FALSE	canonical	0	0	junction_2	3.13138237134266	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAACTCTCATTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	110388646	110397530	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_110388877_110391040_110391166_110392179_110392341_110393606_110393818_110394158_110394261_110395847_110395980_110397245
tx.12327	chr8	-	2328	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	-20	-4	-20	4	multi-exon	FALSE	canonical	3	462	junction_2	71.0226880807973	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGTCAAATGAGTGAA	NA	False	NA	NA	False	NA	NA	NA	110419912	110397952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
tx.12328	chr8	-	1574	4	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	15660	0	-6	0	3prime_fragment	FALSE	canonical	3	462	junction_2	50.6578939773677	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	NA	False	NA	NA	NA	110404232	110397956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117
tx.12329	chr8	-	2269	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	212.348144270205	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGTTGGTCAAATGA	NA	False	NA	NA	False	NA	NA	NA	110419907	110397957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_110399274_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
tx.1233	chr10	+	1198	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181036.2	1197	2	-27	26	-27	-26	multi-exon	FALSE	canonical	3	5	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTATTCTGGAGTCATAA	NA	False	NA	NA	False	NA	NA	NA	104030290	104032357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_104030363_104031231
tx.12330	chr8	-	360	3	ISM	ENSMUSG00000069895.5	ENSMUST00000212726.2	461	4	16	1647	-1	-1647	5prime_fragment	FALSE	canonical	3	22	junction_2	5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTCTGATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	110464355	110461794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_110461996_110462091_110462158_110464262
tx.12331	chr8	+	3939	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-242	-5	110	5	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATTGTACTTTATGGT	NA	False	NA	NA	False	NA	NA	NA	110505295	110587995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
tx.12332	chr8	+	1479	9	NNC	ENSMUSG00000095941.4	novel	1649	10	NA	NA	224	53	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	7.68114574786861	5	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGATTGTGTGTTTCAG	NA	False	NA	NA	False	NA	NA	NA	110828062	110838646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_110828167_110835615_110835750_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837295_110837438_110837593_110837930_110838005_110838289
tx.12333	chr8	-	1446	11	FSM	ENSMUSG00000003657.10	ENSMUST00000003754.8	1431	11	-9	-6	-5	6	multi-exon	FALSE	canonical	3	153	junction_9	44.1960405466372	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTTTCTTGTCGTGGGCC	7607	False	NA	NA	False	NA	NA	NA	110894847	110869163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110881375_110883551_110883629_110894675
tx.12334	chr8	-	1161	9	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	15126	3	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_8	57.2319840648566	41	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTTTCTTGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	110879712	110869166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110879655
tx.12335	chr8	-	663	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	156	junction_2	25.5	34	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGGTATTTGGTCATAT	9324	False	NA	NA	False	NA	NA	NA	111248814	111221979	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr8_-_111222416_111227500_111227611_111248697
tx.12336	chr8	-	651	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_2	70.5	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTGGATGCCACATGA	9528	False	NA	NA	False	NA	NA	NA	111248610	111221994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr8_-_111222416_111227500_111227611_111248490
tx.12337	chr8	+	1400	5	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	256146	76760	78634	45872	internal_fragment	FALSE	canonical	3	22	junction_4	3.26917420765551	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTTTAATATTGACA	NA	False	NA	NA	False	NA	NA	NA	111249754	111260125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307
tx.12339	chr8	+	1650	10	ISM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	27188	0	207	0	3prime_fragment	FALSE	canonical	3	368	junction_6	33.0420607374567	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	111372418	111447030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
tx.1234	chr10	-	1967	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	8	58	1	8	multi-exon	FALSE	canonical	3	65	junction_11	25.2121576340063	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGTGTTTTCATTCTCA	NA	False	NA	NA	False	NA	NA	NA	105677231	105599107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
tx.12340	chr8	-	2466	7	FSM	ENSMUSG00000031750.16	ENSMUST00000076846.11	1709	7	9	-766	9	755	multi-exon	TRUE	canonical	0	0	junction_6	15.61694236683	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAAGCCCCCAAACCAG	5039	False	NA	NA	False	NA	NA	NA	111532526	111467705	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111532365
tx.12341	chr8	-	1504	6	ISM	ENSMUSG00000031750.16	ENSMUST00000076846.11	1709	7	50299	-11	-12906	0	3prime_fragment	FALSE	canonical	3	39	junction_4	2.0591260281974	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGATGGTGAACCTGGA	NA	False	NA	NA	False	NA	NA	NA	111482236	111468460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862
tx.12342	chr8	-	1750	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-13273	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	7.54247233265651	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGATGGTGAACCTGGA	NA	False	NA	NA	False	NA	NA	NA	111482603	111468460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111482403
tx.12343	chr8	-	2430	14	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	21238	253	13058	-253	3prime_fragment	FALSE	canonical	3	599	junction_12	113.698396839124	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	9886	False	NA	NA	False	NA	NA	NA	111552170	111537123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133
tx.12344	chr8	-	4286	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-14	253	-3	-253	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	111573422	111537123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
tx.12345	chr8	+	2743	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	-6	0	4	0	multi-exon	TRUE	canonical	3	332	junction_8	32.668367302671	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTGTGTTGGGTCCAG	9622	False	NA	NA	False	NA	NA	NA	111573659	111608859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
tx.12346	chr8	-	2575	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-23	-5	-23	5	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTACACTTGAGGC	7663	False	NA	NA	False	NA	NA	NA	111724455	111701622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
tx.12347	chr8	-	826	7	FSM	ENSMUSG00000015023.8	ENSMUST00000173183.2	731	7	-41	-54	-11	54	multi-exon	FALSE	canonical	3	259	junction_3	37.1786228900426	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGTGTCATGGGCT	7675	False	NA	NA	False	NA	NA	NA	111724443	111707050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
tx.12348	chr8	-	1789	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	-1	4824	-1	-1353	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATCTTTTTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	111754397	111734643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
tx.12349	chr8	-	1743	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	8	1353	8	-1353	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATCTTTTTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	111758375	111734643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
tx.1235	chr10	-	1890	12	NNC	ENSMUSG00000036009.17	novel	2033	12	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.2127066604228	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGTGTTTTCATTCTCA	NA	False	NA	NA	False	NA	NA	NA	105677238	105599107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661942_105662453_105665708_105665816_105668711_105668877_105676936
tx.12350	chr8	+	3326	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3	-2095	combination_of_known_junctions	FALSE	canonical	2	881	junction_1	574.494062197339	111	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	NA	False	NA	NA	NA	111760507	111782201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
tx.12351	chr8	+	1981	12	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	11045	2095	1868	-2095	3prime_fragment	FALSE	canonical	2	2613	junction_10	284.635332886261	46	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	NA	False	NA	NA	NA	111771578	111782201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
tx.12352	chr8	+	1706	10	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	13103	2095	-907	-2095	3prime_fragment	FALSE	canonical	2	2613	junction_8	305.658164589541	155	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	NA	False	NA	NA	NA	111773636	111782201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
tx.12353	chr8	-	4457	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	-14	0	-14	0	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5482	False	NA	NA	False	NA	NA	NA	112026868	111997575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
tx.12354	chr8	-	1804	7	ISM	ENSMUSG00000031958.17	ENSMUST00000070004.4	2273	11	1158	7	-629	-7	3prime_fragment	FALSE	canonical	2	7	junction_4	3.60555127546399	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTACTGTGTCCCATCC	NA	False	NA	NA	False	NA	NA	NA	112355848	112352909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355353_112355617
tx.12355	chr8	+	1856	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	-44	-1	-18	1	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTTTTTGGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	112370093	112397644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
tx.12356	chr8	+	1766	4	FSM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	-31	-326	0	0	multi-exon	FALSE	canonical	3	27	junction_2	24.1430919496424	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGAGTGTTTTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	112370137	112397640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_112370245_112385017_112385074_112392751_112392837_112396122
tx.12357	chr8	-	3122	7	FSM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	0	-6	0	3	multi-exon	FALSE	canonical	3	127	junction_1	13.2591687354659	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTACAGAAATGCTTGAGA	NA	False	NA	NA	False	NA	NA	NA	112458768	112437102	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112458670
tx.12358	chr8	-	1241	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-46	-17	-46	17	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	1841	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGTGCCGTGCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	112580969	112495105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
tx.12359	chr8	-	2899	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	85	0	3	0	multi-exon	FALSE	canonical	3	251	junction_1	6.79256129077161	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCCTTGGCTTCTGAA	NA	False	NA	NA	False	NA	NA	NA	112660428	112638642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
tx.1236	chr10	+	999	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	407	407	-30	-407	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCTCACAGTGAGATA	NA	False	NA	NA	False	NA	NA	NA	105677334	105683287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
tx.12360	chr8	+	967	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	13	697	13	173	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	1132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	NA	NA	NA	112667347	112679547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
tx.12361	chr8	-	3076	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	31	52	31	-52	multi-exon	FALSE	canonical	3	33	junction_1	12.5521135891752	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTTCTTTTATGAGA	NA	False	NA	NA	False	NA	NA	NA	112718903	112693591	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
tx.12362	chr8	-	2155	15	FSM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	-24	0	7	0	multi-exon	FALSE	canonical	3	198	junction_14	463.92143951408	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	112737922	112720074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112737841
tx.12363	chr8	-	1975	14	FSM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	33	0	7	0	multi-exon	FALSE	canonical	3	1149	junction_10	189.523538373557	323	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	112737922	112720074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
tx.12364	chr8	+	2229	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	4	1327	0	-1327	multi-exon	FALSE	canonical	3	135	junction_1	1.5	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCATTTTCTTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	112738033	112745833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_112738775_112741968_112742094_112744470
tx.12365	chr8	+	666	4	ISM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	-16	5309	-9	-5309	5prime_fragment	FALSE	canonical	3	123	junction_1	3.39934634239519	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTGTTACAGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	115166425	115175249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899
tx.12366	chr8	+	1138	8	ISM	ENSMUSG00000004637.16	ENSMUST00000160862.8	1715	9	-5	6428	-5	5927	5prime_fragment	FALSE	canonical	3	58	junction_7	25.2303671905787	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGCGGCTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	115166429	115438991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726
tx.12367	chr8	-	2263	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59809	-16	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	32	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGAAGAACATGACTTA	NA	False	NA	NA	False	NA	NA	NA	117399921	117301154	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
tx.12368	chr8	-	609	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	17	833	1	0	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	NA	False	NA	NA	NA	117648177	117616256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
tx.12369	chr8	-	539	3	FSM	ENSMUSG00000014633.16	ENSMUST00000078589.7	523	3	-1	-15	-1	0	multi-exon	FALSE	canonical	3	30	junction_1	157.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	NA	False	NA	NA	NA	117648179	117616256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_117616599_117637866_117637974_117648089
tx.1237	chr10	+	2425	16	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-49	16432	-49	7443	5prime_fragment	TRUE	canonical	3	168	junction_12	22.3352238005851	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAGAAAAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	107998004	108096780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696
tx.12370	chr8	+	1787	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-18	-1	-8	1	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	NA	False	NA	NA	NA	117648460	117668243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
tx.12371	chr8	-	2981	3	FSM	ENSMUSG00000031847.9	ENSMUST00000213068.2	1482	3	9	-1508	-7	-6	multi-exon	FALSE	canonical	1	4	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAATTGGCTCTCTCACT	8534	False	NA	NA	False	NA	NA	NA	117705689	117696338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_117698896_117700190_117700439_117705513
tx.12372	chr8	-	1231	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	50	162	50	-162	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	1247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	117720226	117708710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
tx.12373	chr8	-	1157	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	44	-162	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	974.020647739165	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	117720232	117708710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_117709466_117710546_117710679_117714051_117714116_117720026
tx.12374	chr8	-	1995	5	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53606	22962	0	4909	internal_fragment	FALSE	canonical	3	6	junction_4	1.92028643696715	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGAGCACAGGATCAT	NA	False	NA	NA	False	NA	NA	NA	117755582	117745379	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
tx.12375	chr8	+	1903	12	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	102740	0	102740	0	3prime_fragment	FALSE	canonical	3	117	junction_1	25.4749917882532	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	NA	False	NA	NA	False	NA	NA	NA	118327769	118361881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
tx.12376	chr8	+	1248	7	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	112465	0	112465	0	3prime_fragment	FALSE	canonical	3	152	junction_3	15.2797978462486	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	NA	False	NA	NA	False	NA	NA	NA	118337494	118361881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
tx.12377	chr8	+	1278	5	FSM	ENSMUSG00000031844.9	ENSMUST00000034304.9	1320	5	43	-1	43	1	multi-exon	FALSE	canonical	1	1	junction_3	2.69258240356725	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTATTTTGAAATGTG	NA	False	NA	NA	False	NA	NA	NA	118428685	118485767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_118429003_118461232_118461446_118469070_118469257_118479924_118480063_118485343
tx.12378	chr8	-	1070	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	1	-3	1	3	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	509	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTAATTTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	118528681	118518380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
tx.12379	chr8	+	1193	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	15	0	-13	0	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	651	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAGAATGGTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	120071241	120075661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
tx.1238	chr13	+	207	1	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGGAAATTCTCAGGC	NA	False	NA	NA	False	NA	NA	NA	44539347	44539554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_44539300_44539600
tx.12380	chr8	+	1285	9	ISM	ENSMUSG00000031837.15	ENSMUST00000098363.10	1976	13	7625	0	1912	0	3prime_fragment	FALSE	canonical	3	52	junction_2	2.75850956133924	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTCTCTGTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	120181082	120199379	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
tx.12381	chr8	-	1334	5	ISM	ENSMUSG00000031835.17	ENSMUST00000212601.2	6789	22	40444	-1	-2418	1	3prime_fragment	FALSE	canonical	3	500	junction_3	13.3299474867683	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	120245000	120234893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877
tx.12382	chr8	-	3144	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	8	-11	0	11	multi-exon	TRUE	canonical	3	107	junction_4	18.9274932307477	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGGTCTTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	120301914	120288716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
tx.12383	chr8	+	1968	10	FSM	ENSMUSG00000024266.9	ENSMUST00000098361.4	1926	10	-40	-2	-40	2	multi-exon	FALSE	canonical	3	9	junction_8	9.71571210608852	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4241	False	NA	NA	False	NA	NA	NA	120339445	120343665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343147_120343269_120343352
tx.12384	chr8	+	517	2	ISM	ENSMUSG00000024266.9	ENSMUST00000098361.4	1926	10	3579	-2	3579	2	3prime_fragment	FALSE	canonical	3	45	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	7860	False	NA	NA	False	NA	NA	NA	120343064	120343665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_120343269_120343352
tx.12385	chr8	-	3067	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	-30	48	-30	-48	multi-exon	TRUE	canonical	3	25	junction_5	4.74664220738176	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTTTTGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	120505185	120486862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
tx.12386	chr8	-	1633	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	-32	-5	-32	5	multi-exon	FALSE	canonical	3	203	junction_1	12.9185482500507	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGGGTTGTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	120567315	120535955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
tx.12387	chr8	+	2565	4	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	-14	14150	-14	2006	5prime_fragment	FALSE	canonical	3	740	junction_3	442.529848334174	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTTTGCCTGCATGT	8813	False	NA	NA	False	NA	NA	NA	120637538	120670149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851
tx.12388	chr8	+	3287	14	FSM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	444	-5	-10	0	multi-exon	FALSE	canonical	3	816	junction_3	215.032734538435	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8817	False	NA	NA	False	NA	NA	NA	120637542	120684299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
tx.12389	chr8	+	3284	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	-10	0	-10	0	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8817	False	NA	NA	False	NA	NA	NA	120637542	120684299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
tx.1239	chr10	+	1381	3	ISM	ENSMUSG00000035873.9	ENSMUST00000218332.2	870	5	76698	-1093	76698	607	3prime_fragment	FALSE	canonical	3	675	junction_1	3.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTTTTGTGTCGTGTT	NA	False	NA	NA	False	NA	NA	NA	108245375	108250708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_108245472_108247824_108247930_108249528
tx.12390	chr8	+	1630	6	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	39548	0	-1601	0	3prime_fragment	FALSE	canonical	3	1352	junction_1	66.3644483138374	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	4353	False	NA	NA	False	NA	NA	NA	120677100	120684299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
tx.12391	chr8	+	1353	4	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	42368	0	-93	0	3prime_fragment	FALSE	canonical	3	1459	junction_3	24.7790233867277	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	7173	False	NA	NA	False	NA	NA	NA	120679920	120684299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_120680085_120681527_120681673_120682936_120683003_120683321
tx.12392	chr8	+	1177	3	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	43987	0	-1405	0	3prime_fragment	FALSE	canonical	3	1459	junction_2	25.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8792	False	NA	NA	False	NA	NA	NA	120681539	120684299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_120681673_120682936_120683003_120683321
tx.12393	chr8	-	1061	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	208	2631	-62	280	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	959	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAGAACGGGTTTAATT	NA	False	NA	NA	False	NA	NA	NA	121315835	121308002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
tx.12394	chr8	-	990	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	34	3918	0	1	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	509	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTACACGGTGTACCT	NA	False	NA	NA	False	NA	NA	NA	121394826	121384570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
tx.12395	chr8	+	689	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	56	0	17	0	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	5650	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	121395016	121400946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
tx.12396	chr8	+	2842	9	FSM	ENSMUSG00000041515.11	ENSMUST00000047737.10	2847	9	0	5	0	-5	multi-exon	TRUE	canonical	3	23	junction_1	7.56637297521078	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTAATGTTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	121463096	121483428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
tx.12398	chr8	+	2492	6	ISM	ENSMUSG00000041515.11	ENSMUST00000162001.8	2270	9	6925	-1113	84	0	3prime_fragment	FALSE	canonical	3	35	junction_1	4.84148737476408	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTTGTTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	121472302	121483433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
tx.12399	chr8	-	1339	10	FSM	ENSMUSG00000031816.16	ENSMUST00000133037.8	1060	10	55	-334	6	36	multi-exon	FALSE	canonical	3	29	junction_2	18.6494629717802	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGTGCCCTCAATCTA	NA	False	NA	NA	False	NA	NA	NA	121835076	121824255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
tx.124	chr1	-	5043	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-47	-229	-34	0	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	NA	False	NA	NA	NA	51955134	51788923	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
tx.1240	chr10	+	889	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	387	108	-14	0	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTTTCAGAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	110756036	110775375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
tx.12400	chr8	-	1498	9	NIC	ENSMUSG00000031816.16	novel	1366	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	48	junction_6	14.260412862186	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTTGTATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	121835049	121824296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
tx.12401	chr8	-	421	2	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCATTTGTTTTGATG	NA	False	NA	NA	False	NA	NA	NA	122106312	122105759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_-_122106116_122106247
tx.12402	chr8	-	1125	7	FSM	ENSMUSG00000031809.11	ENSMUST00000183280.2	959	7	-100	-66	-15	18	multi-exon	FALSE	canonical	2	4	junction_4	3.09569593683445	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTTCTGTGTTTGGCCCC	NA	False	NA	NA	False	NA	NA	NA	122268708	122257500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_122257781_122258436_122258654_122260433_122260471_122262161_122262309_122266605_122266747_122267267_122267320_122268457
tx.12404	chr8	+	1713	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	105	714	-11	0	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTGATGTCTCATTG	9950	False	NA	NA	False	NA	NA	NA	122317204	122324785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
tx.12405	chr8	-	2037	12	FSM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	24	17	-5	3	multi-exon	FALSE	canonical	3	124	junction_5	29.2453287927892	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCTTTCTTCTACAGA	460	False	NA	NA	False	NA	NA	NA	122556284	122523068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
tx.12406	chr8	-	1520	9	ISM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	3	2745	3	427	5prime_fragment	FALSE	canonical	3	124	junction_2	30.0829582155745	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGAGTACCTGCTGTG	439	False	NA	NA	False	NA	NA	NA	122556305	122525796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
tx.12407	chr8	-	1515	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20936	-712	3506	712	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCTCCCCAACTGACT	NA	False	NA	NA	False	NA	NA	NA	122650707	122642152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
tx.12408	chr8	-	1670	3	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20930	-712	3500	712	intron_retention	FALSE	canonical	3	94	junction_1	2	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCTCCCCAACTGACT	NA	False	NA	NA	False	NA	NA	NA	122650713	122642152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_122643247_122644726_122644883_122650293
tx.12409	chr8	+	2334	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	122677303	122752917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
tx.1241	chr10	+	956	5	ISM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	12003	125	164	-17	3prime_fragment	FALSE	canonical	3	202	junction_1	3.56195171219375	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTACCACCTCTTAATTA	NA	False	NA	NA	False	NA	NA	NA	110767652	110775358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
tx.12410	chr8	+	2229	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	67.3046040195039	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGCTCAGTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	122677280	122752915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
tx.12411	chr8	+	2215	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	75	-1	-8	1	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	122677305	122752917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
tx.12412	chr8	+	3710	18	FSM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	-5	0	-5	0	multi-exon	FALSE	canonical	3	173	junction_3	41.8252254144417	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	934	False	NA	NA	False	NA	NA	NA	123103376	123144099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
tx.12413	chr8	-	748	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	-3	-1	-3	1	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	187	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACAAGAAATTCTCCATA	NA	False	NA	NA	False	NA	NA	NA	123159672	123151513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
tx.12414	chr8	-	1748	10	FSM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	8	0	8	0	multi-exon	FALSE	canonical	3	183	junction_4	22.2211110833319	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	123170153	123160339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
tx.12415	chr8	+	1688	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	33	1345	33	3	multi-exon	FALSE	canonical	3	114	junction_5	16.7624458787116	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8895	False	NA	NA	False	NA	NA	NA	123202914	123208486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
tx.12416	chr8	+	1610	15	FSM	ENSMUSG00000049482.17	ENSMUST00000151855.8	3999	15	-2	2391	-2	3	multi-exon	FALSE	canonical	3	8	junction_11	35.9174222974004	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8926	False	NA	NA	False	NA	NA	NA	123202945	123208486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209_123208269_123208334
tx.12417	chr8	+	2197	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	0	-8	0	8	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCACCGTAAAATCTCT	2586	False	NA	NA	False	NA	NA	NA	123294753	123299875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
tx.12418	chr8	-	868	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	-18	-1	1	-1	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	521	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	NA	False	NA	NA	NA	123303647	123301374	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
tx.12419	chr8	+	602	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	-12	1069	-6	-1069	multi-exon	FALSE	canonical	3	528	junction_1	75.9884859699152	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGTTGTCCTGTGTCAG	5510	False	NA	NA	False	NA	NA	NA	123338372	123342330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
tx.1242	chr10	+	2751	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	-4	-3	-4	3	multi-exon	FALSE	canonical	3	23	junction_1	0	3	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTAAGTTAATTGTCCT	NA	False	NA	NA	False	NA	NA	NA	111134535	111137591	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_111134769_111135073
tx.12420	chr8	+	2197	10	FSM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	3	6	3	-6	multi-exon	FALSE	canonical	2	11	junction_1	8.97458689169274	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACTGTGACCTGTGA	9537	False	NA	NA	False	NA	NA	NA	123502246	123544613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
tx.12422	chr8	+	755	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	25	0	25	0	multi-exon	FALSE	canonical	3	17818	junction_5	2681.35350895774	1413	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	123829113	123831983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
tx.12423	chr8	-	1160	7	FSM	ENSMUSG00000000739.15	ENSMUST00000000755.15	3805	7	-6	2651	-2	6	multi-exon	FALSE	canonical	3	57	junction_6	18.7764628073435	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTCCCAGGCTCAGC	9737	False	NA	NA	False	NA	NA	NA	123885015	123869581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884327_123884926
tx.12424	chr8	-	1157	7	NIC	ENSMUSG00000000739.15	novel	3805	7	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	23.3380947522857	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTCTGTCCCAGGCTCA	9753	False	NA	NA	False	NA	NA	NA	123884999	123869583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884342_123884926
tx.12426	chr8	+	1161	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	-44	-2	-44	2	multi-exon	FALSE	canonical	2	12	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACATGGTGGTGTGTCTTT	3284	False	NA	NA	False	NA	NA	NA	123899539	123905506	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123899783_123904588
tx.12427	chr8	+	2108	11	NNC	ENSMUSG00000019278.6	novel	985	7	NA	NA	-61	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGGCCAATGACCCC	NA	False	NA	NA	False	NA	NA	NA	123920171	123928545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_123920250_123920771_123920926_123925452_123925586_123925783_123925917_123926032_123926184_123926360_123926431_123926679_123926857_123926945_123927031_123927105_123927182_123927376_123927513_123927630
tx.12428	chr8	-	2149	6	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.847163982072	127	2	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCAGACTTTTTTTTTT	9741	False	NA	NA	False	NA	NA	NA	123939503	123931002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123939379
tx.12429	chr8	+	1636	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	10	-4	-2	4	multi-exon	FALSE	canonical	3	205	junction_10	22.2279853638006	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTTGGCAATCCTTTA	2135	False	NA	NA	False	NA	NA	NA	123951590	123958993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
tx.1243	chr10	+	2741	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	14	-11	14	11	multi-exon	FALSE	canonical	3	23	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAATTGTCCTTGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	111134553	111137599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_111134769_111135073
tx.12430	chr8	+	1595	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	-9	-6	3	6	multi-exon	FALSE	canonical	3	85	junction_1	49.2958754190788	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGGCAATCCTTTAAT	2140	False	NA	NA	False	NA	NA	NA	123951595	123958995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
tx.12431	chr8	-	920	6	FSM	ENSMUSG00000032815.17	ENSMUST00000150318.2	895	6	-23	-2	-7	2	multi-exon	FALSE	canonical	3	111	junction_3	15.8795465930234	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGCATGTCTCATG	NA	False	NA	NA	False	NA	NA	NA	124045322	124039019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
tx.12432	chr8	+	2677	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	-19	-9	-19	5	multi-exon	TRUE	canonical	3	129	junction_17	98.3685253625717	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	124100472	124130554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
tx.12433	chr8	+	2223	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-43	558	-3	103	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGTCTTTTGTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	124100519	124128073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
tx.12434	chr8	+	2619	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	-28	-9	11	5	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	124100533	124130554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
tx.12435	chr8	+	1734	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	129	5	-37	-5	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCTGGTATTGGAGA	NA	False	NA	NA	False	NA	NA	NA	124138291	124148749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
tx.12436	chr8	+	3127	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	53.2429330273546	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	NA	False	NA	NA	NA	124169724	124190009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
tx.12437	chr8	+	2656	8	ISM	ENSMUSG00000001482.16	ENSMUST00000108830.2	3191	12	10953	-8	7079	0	3prime_fragment	FALSE	canonical	3	222	junction_7	30.6121224487347	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	NA	False	NA	NA	NA	124180999	124190009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
tx.12438	chr8	+	1318	8	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-22	13604	-22	374	5prime_fragment	FALSE	canonical	3	631	junction_4	49.623891546763	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTGTTTGTTTTTCT	7473	False	NA	NA	False	NA	NA	NA	124204619	124217051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493
tx.12439	chr8	+	2523	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-34	1738	-34	563	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGTCTCAGATAAGACC	7461	False	NA	NA	False	NA	NA	NA	124204607	124228917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
tx.1244	chr10	+	2123	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-8	-765	7	0	multi-exon	TRUE	canonical	3	980	junction_10	363.653962004586	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	NA	False	NA	NA	NA	111309094	111332745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
tx.12440	chr8	+	2049	13	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	8032	1738	5569	563	3prime_fragment	FALSE	canonical	3	663	junction_1	37.52360368266	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGTCTCAGATAAGACC	NA	False	NA	NA	False	NA	NA	NA	124212673	124228917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
tx.12441	chr8	+	1630	11	FSM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	51	0	29	0	multi-exon	FALSE	canonical	3	26	junction_4	6.18789140176199	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGTCGTTGTGAGG	NA	False	NA	NA	False	NA	NA	NA	124245623	124263389	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124245692_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991_124260058_124263111
tx.12442	chr8	+	1401	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	22	-4	22	4	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACACTGTCCTGCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	124532745	124562030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
tx.12443	chr8	-	2659	2	ISM	ENSMUSG00000085030.2_ENSMUSG00000031971.16	ENSMUST00000034452.12	2390	3	14234	-854	-4511	854	3prime_fragment	FALSE	canonical	3	78	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATGCCCAGCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	124572035	124566715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_124569258_124571918
tx.12444	chr8	-	3647	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	-12	2173	-12	-2173	multi-exon	TRUE	canonical	3	328	junction_14	43.1434815470425	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGGATCAACCTGAAGT	NA	False	NA	NA	False	NA	NA	NA	124676016	124626034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
tx.12445	chr8	-	925	8	ISM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	34703	2177	1073	-2177	3prime_fragment	FALSE	canonical	3	363	junction_7	38.0852963217876	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	NA	False	NA	NA	NA	124641301	124626038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236
tx.12446	chr8	+	2383	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	96	1634	-21	-1634	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTCCGTTCCCTACGC	8661	False	NA	NA	False	NA	NA	NA	124958225	125070827	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
tx.12447	chr8	+	2790	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	35	0	-2	0	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	NA	False	NA	NA	NA	125247540	125278747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
tx.12448	chr8	-	3315	23	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	143	junction_17	103.32721034023	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	125448722	125398065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.12449	chr8	-	1562	8	NNC	ENSMUSG00000037300.20	novel	2970	20	NA	NA	-548	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	120.59833822932	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	125406235	125398066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406113
tx.1245	chr10	+	1148	6	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	12747	1266	-540	0	3prime_fragment	FALSE	canonical	3	980	junction_1	408.770351175327	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	NA	False	NA	NA	NA	111329224	111332745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
tx.12450	chr8	-	2916	19	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	125	junction_15	88.9418592170619	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	125448711	125398066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.12451	chr8	-	1471	12	ISM	ENSMUSG00000037300.20	ENSMUST00000041614.15	3038	18	2	8656	-2	-450	5prime_fragment	FALSE	canonical	3	125	junction_8	104.246529165125	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTAAGCCTCCAGTTCTC	NA	False	NA	NA	False	NA	NA	NA	125448709	125406729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.12452	chr8	+	687	4	NIC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	-31	-1412	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	27.4752413799932	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGTGCTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	125448846	125457755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457577
tx.12453	chr8	+	2990	5	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	27	13	7	-13	intron_retention	FALSE	canonical	3	83	junction_2	14.0890028036054	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAGTTCAGTAACTAAG	NA	False	NA	NA	False	NA	NA	NA	125448904	125460849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535
tx.12454	chr8	+	1167	6	FSM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	0	-2	0	2	multi-exon	FALSE	canonical	3	19	junction_5	35.5111250173801	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTTGTCTTTTGAATT	NA	False	NA	NA	False	NA	NA	NA	125448877	125460864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460545
tx.12455	chr8	+	1146	6	NNC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	9	-13	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	37.0113496106262	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAGTTCAGTAACTAAG	NA	False	NA	NA	False	NA	NA	NA	125448906	125460849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460522
tx.12456	chr8	-	1363	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	110	867	4	-867	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	878	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGACTGTTAAGTAGCA	NA	False	NA	NA	False	NA	NA	NA	125589749	125566093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
tx.12457	chr8	+	2959	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	20	5	-19	-5	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACCCAATGGTCTTA	5140	False	NA	NA	False	NA	NA	NA	125589791	125616791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
tx.12458	chr8	+	873	3	ISM	ENSMUSG00000031985.10	ENSMUST00000161628.2	908	6	3402	-504	-712	-5	3prime_fragment	FALSE	canonical	3	609	junction_2	13.5	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACCCAATGGTCTTA	NA	False	NA	NA	False	NA	NA	NA	125613655	125616791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_125613686_125614496_125614559_125616010
tx.12459	chr8	+	843	2	FSM	ENSMUSG00000031985.10	ENSMUST00000159864.2	538	2	129	-434	129	-5	multi-exon	FALSE	canonical	3	609	junction_1	0	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACCCAATGGTCTTA	NA	False	NA	NA	False	NA	NA	NA	125614496	125616791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_125614559_125616010
tx.1246	chr10	+	2609	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	105	2309	-6	-771	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTGTTTATGATGAAG	NA	False	NA	NA	False	NA	NA	NA	111808673	111822028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
tx.12460	chr8	+	2275	5	FSM	ENSMUSG00000056820.8	ENSMUST00000212603.2	2169	5	-92	-14	-40	14	multi-exon	FALSE	canonical	3	396	junction_1	23.7631542519086	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATTTTCCTTATTAAT	5154	False	NA	NA	False	NA	NA	NA	125739695	125757174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506
tx.12461	chr8	+	2351	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	43	-3	-9	3	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTGGTTAAGCTTTTA	5237	False	NA	NA	False	NA	NA	NA	125739778	125760934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
tx.12462	chr8	+	1932	2	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCGTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	126054676	126063976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_126054863_126062230
tx.12463	chr8	+	2046	3	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGAAGGCCATGTGTGA	8867	False	NA	NA	False	NA	NA	NA	126431435	126443968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_126431679_126435770_126435839_126442233
tx.12464	chr8	+	1118	5	NNC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	25.0499500997507	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACAGGAGTCCTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	126460971	126474972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_126461089_126462806_126462965_126464061_126464159_126471974_126472185_126474436
tx.12465	chr8	+	1125	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	30	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGAGTCCTTGTGTGGG	NA	False	NA	NA	False	NA	NA	NA	126460971	126474974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
tx.12466	chr8	+	299	2	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGTCTCGACTCATT	NA	False	NA	NA	False	NA	NA	NA	126687035	126691425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_126687171_126691261
tx.12467	chr8	+	2136	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	99	0	99	0	multi-exon	FALSE	canonical	3	118	junction_2	9	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGTTTATTACAACT	NA	False	NA	NA	False	NA	NA	NA	126722007	126757424	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_126722554_126751750_126752147_126756230
tx.12468	chr8	+	1444	4	FSM	ENSMUSG00000033998.10	ENSMUST00000212831.2	1309	4	-133	-2	133	0	multi-exon	FALSE	canonical	3	7	junction_3	57.0438427878066	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGTTTATTACAACT	NA	False	NA	NA	False	NA	NA	NA	126722041	126757424	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_126722554_126751750_126752147_126756230_126756432_126757089
tx.12469	chr8	+	759	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	-10	-2	-10	2	multi-exon	FALSE	canonical	3	239	junction_1	0	162	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTTCTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	127149243	127152174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_127149570_127151741
tx.1247	chr10	-	2853	14	ISM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	18260	588	-11499	-588	3prime_fragment	FALSE	canonical	3	412	junction_10	41.961802861749	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	NA	False	NA	NA	NA	115069112	115034364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024
tx.12470	chr8	-	1023	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-4	3883	0	436	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	1615	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGTGCGGTGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	127672594	127661299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
tx.12471	chr8	-	3247	10	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	50.1686046137312	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAAAGATGCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	127697799	127673930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127697487_127697660_127697739
tx.12472	chr8	-	1571	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	1	1852	0	2	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTTCAAATGGTCACT	NA	False	NA	NA	False	NA	NA	NA	127697820	127675773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
tx.12473	chr8	+	2016	5	ISM	ENSMUSG00000025812.19	ENSMUST00000160766.8	4949	23	395739	41	12607	-41	3prime_fragment	FALSE	canonical	3	44	junction_1	14.8996644257513	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAACCTTGAGCAAA	NA	False	NA	NA	False	NA	NA	NA	128186833	128338410	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
tx.12474	chr8	+	2204	4	FSM	ENSMUSG00000025812.19	ENSMUST00000159940.2	746	4	-21	-1437	-21	-1	multi-exon	FALSE	canonical	3	17	junction_1	28.2410261066335	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	128306183	128338766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_128306285_128319541_128319663_128329539_128329668_128336912
tx.12475	chr8	+	3089	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	141	585	38	-2	multi-exon	TRUE	canonical	3	487	junction_6	37.7685348169905	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGTCCATTGGAAAAATT	NA	False	NA	NA	False	NA	NA	NA	129412275	129459096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
tx.12476	chr8	+	3392	14	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	21463	7	-17216	-7	3prime_fragment	FALSE	canonical	3	487	junction_4	38.2936335030238	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGATTTGTTTTGGCT	NA	False	NA	NA	False	NA	NA	NA	129433597	129459674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
tx.12477	chr8	+	2795	11	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	28437	3	-10242	-3	3prime_fragment	FALSE	canonical	3	487	junction_1	36.8722117589927	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTTTTGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	129440571	129459678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
tx.12478	chr8	+	1698	4	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	37260	-1	-1419	1	3prime_fragment	FALSE	canonical	3	537	junction_3	32.3213036040731	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGGCTCTGTATTT	NA	False	NA	NA	False	NA	NA	NA	129449394	129459682	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_129449514_129450676_129450910_129452500_129452668_129458503
tx.12479	chr8	-	1460	5	FSM	ENSMUSG00000071302.11	ENSMUST00000190157.7	1776	5	7	309	7	-309	multi-exon	FALSE	canonical	0	0	junction_1	25.7584937447825	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTGGTTATTTGATC	NA	False	NA	NA	False	NA	NA	NA	129960520	129943143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_129944231_129946582_129946633_129948024_129948086_129948304_129948432_129960385
tx.1248	chr10	-	3142	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	22	588	22	-588	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	NA	False	NA	NA	NA	115087350	115034364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
tx.12480	chr8	-	3798	4	FSM	ENSMUSG00000071302.11	ENSMUST00000189965.2	343	4	-24	-3431	-24	-310	multi-exon	FALSE	canonical	3	6	junction_3	25.9358182185692	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGGCTGGTTATTTGAT	NA	False	NA	NA	False	NA	NA	NA	129960911	129943144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960789
tx.12481	chr8	+	604	4	FSM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	-40	570	-40	-570	multi-exon	FALSE	canonical	3	25	junction_3	15.5777619273972	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTGGTAAAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	129990081	130008755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463
tx.12482	chr9	-	2721	5	NNC	ENSMUSG00000042360.13	novel	1128	4	NA	NA	3	1522	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	4.41588043316392	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAATAAAAAAACATCCA	NA	False	NA	NA	False	NA	NA	NA	3199779	3188748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_3190806_3192311_3192413_3192819_3193049_3197276_3197368_3199536
tx.12483	chr9	-	2476	4	FSM	ENSMUSG00000042360.13	ENSMUST00000188577.2	1128	4	0	-1348	0	1348	multi-exon	FALSE	canonical	3	3	junction_3	6.12825877028341	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAACAAAACTACAAATA	NA	False	NA	NA	False	NA	NA	NA	3199799	3188922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_3190806_3192311_3192413_3192819_3193049_3199536
tx.12484	chr9	+	2707	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	0	4967	0	12	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTTTCTCACTGCATC	-8	True	NA	NA	False	NA	NA	NA	3335477	3386187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
tx.12485	chr9	+	284	3	FSM	ENSMUSG00000025898.7	ENSMUST00000212644.2	2085	3	-13	1814	-13	-1814	multi-exon	FALSE	canonical	3	277	junction_2	20.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAGAAGAAGAGGAA	-4	True	NA	NA	False	NA	NA	NA	3404074	3411385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_3404191_3409965_3410077_3411328
tx.12486	chr9	+	4030	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	486	-70	-10	70	multi-exon	TRUE	canonical	3	200	junction_7	32.0504576240346	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATATCCTGCTCACTGC	-1	True	NA	NA	False	NA	NA	NA	3404077	3479306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
tx.12487	chr9	-	1559	5	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	0	-992	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	350.365077454931	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCGTCTTAGGGTTTC	-1	True	NA	NA	False	NA	NA	NA	4309469	4295956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308693_4308920_4309253
tx.12488	chr9	-	1654	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-11	1167	-9	-996	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGTCGTCTTAGGG	-12	True	NA	NA	False	NA	NA	NA	4309480	4295960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
tx.12489	chr9	-	1615	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-14	1242	-10	-1070	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	632	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATCGACTCAGATGATT	-13	True	NA	NA	False	NA	NA	NA	4309481	4296034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
tx.1249	chr10	-	1840	8	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	63.4967458590901	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTGTTTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	115198129	115176641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_115177245_115178378_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
tx.12490	chr9	-	1464	5	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-12	-1061	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	348.214732600446	38	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATGATTCTGATTTTT	-15	True	NA	NA	False	NA	NA	NA	4309483	4296025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308733_4308920_4309253
tx.12491	chr9	-	1417	5	ISM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-25	1786	-23	-1615	intron_retention	FALSE	canonical	3	643	junction_4	110.637640520756	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTTAAAGACACAAATT	19	False	4309513	NA	False	NA	NA	NA	4309494	4296579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693
tx.12492	chr9	+	785	4	FSM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	-110	1638	-108	-1638	multi-exon	FALSE	canonical	3	18	junction_1	18.4571575998762	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGCATTTGTTATCTC	-9	True	NA	NA	False	NA	NA	NA	4309724	4330073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_4309935_4313701_4313807_4316826_4317072_4329848
tx.12493	chr9	+	683	3	FSM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	-111	1659	-111	-1638	multi-exon	TRUE	canonical	3	30	junction_1	14.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGCATTTGTTATCTC	-12	True	NA	NA	False	NA	NA	NA	4309721	4330073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_4309935_4316826_4317072_4329848
tx.12494	chr9	+	2804	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	11	-15	4	15	multi-exon	FALSE	canonical	3	88	junction_1	13	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATCATTCAGAGTTATA	6	True	NA	NA	False	NA	NA	NA	4376572	4386885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_4376624_4383536_4384143_4384738
tx.12495	chr9	+	2740	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	0	-9	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTCTGAAAGTTTA	13	False	NA	NA	False	NA	NA	NA	4383534	4386870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_4384143_4384738
tx.12496	chr9	+	1082	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	176	1163	145	2	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCCGTTGAGTGTCAGA	155	False	NA	NA	False	NA	NA	NA	7184695	7207042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
tx.12497	chr9	+	1909	11	NNC	ENSMUSG00000049723.15	novel	3607	10	NA	NA	-38750	-205	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_7	1.84390889145858	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTTTTAATTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	7305630	7358683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_7305828_7347490_7347539_7348584_7348833_7349722_7349872_7350011_7350138_7352887_7353050_7353445_7353570_7354721_7354856_7355311_7355472_7357804_7357909_7358226
tx.12498	chr9	+	2835	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	72	0	-36	0	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	-4	True	NA	NA	False	NA	NA	NA	7764113	7794334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
tx.12499	chr9	-	3336	8	FSM	ENSMUSG00000057367.13	ENSMUST00000190341.7	3331	8	-6	1	0	-1	multi-exon	FALSE	canonical	3	127	junction_2	22.0352222681815	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-26	True	NA	NA	False	NA	NA	NA	7837064	7818228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
tx.125	chr1	-	3720	20	ISM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	121597	-229	894	0	3prime_fragment	FALSE	canonical	3	284	junction_11	27.5089509482181	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	NA	False	NA	NA	NA	51833490	51788923	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470
tx.1250	chr10	-	2764	7	FSM	ENSMUSG00000069520.7	ENSMUST00000217884.2	2799	7	38	-3	30	3	multi-exon	FALSE	canonical	2	3	junction_6	78.0590944235342	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	115198368	115176643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115198291
tx.12500	chr9	-	1828	7	FSM	ENSMUSG00000053070.6	ENSMUST00000065291.2	1592	7	-29	-207	-29	207	multi-exon	FALSE	canonical	2	5	junction_1	2.38047614284762	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAATTCTTATTATATA	-20	True	NA	NA	False	NA	NA	NA	8042853	8021465	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_8022546_8023900_8023968_8025962_8026136_8027101_8027269_8037460_8037537_8042409_8042492_8042670
tx.12501	chr9	+	1157	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	-4	1216	-4	1014	multi-exon	FALSE	canonical	3	27	junction_1	5	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGAATTCATTTCCCT	NA	False	NA	NA	False	NA	NA	NA	13246605	13253208	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_13246677_13251695_13252424_13252850
tx.12502	chr9	+	3050	3	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	39452	974	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGTTACCTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	13613207	13619615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_13613418_13613539_13613652_13616887
tx.12503	chr9	+	1880	6	ISM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	49957	0	3177	0	3prime_fragment	FALSE	canonical	3	385	junction_5	35.2681159122514	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	1527	False	NA	NA	False	NA	NA	NA	13710449	13717777	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
tx.12504	chr9	-	2406	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	-114	-30	-16	0	multi-exon	FALSE	canonical	3	58	junction_3	63.5314639653475	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCTAACAAAGGCTTTA	NA	False	NA	NA	False	NA	NA	NA	13738365	13719090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
tx.12505	chr9	-	2503	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	19	1	19	0	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCTAACAAAGGCTTTA	NA	False	NA	NA	False	NA	NA	NA	13738384	13719090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
tx.12506	chr9	+	3664	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	19	19	0	-19	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTCTGCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	13739030	13757818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
tx.12507	chr9	+	1029	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	52	30	22	-15	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	1028	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACTGTCCCCAACTT	NA	False	NA	NA	False	NA	NA	NA	14411964	14421843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
tx.12508	chr9	-	2244	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	0	-1207	0	5	multi-exon	FALSE	canonical	3	83	junction_2	53	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGTCTCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	14695822	14691077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_14692908_14693910_14694259_14695756
tx.12509	chr9	-	2178	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	0	-425	0	3	multi-exon	FALSE	canonical	3	189	junction_1	0	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGTGTTTGTCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	14694260	14691079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_14692908_14693910
tx.1251	chr10	-	1970	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	30	1012	-6	-1012	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGATTCCTTACTGCCGT	NA	False	NA	NA	False	NA	NA	NA	115198142	115177658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
tx.12510	chr9	-	2218	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	294	167	-12	2	multi-exon	FALSE	canonical	3	72	junction_2	58.5	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGTGTTTGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	14695858	14691080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_14692908_14693910_14694259_14695815
tx.12511	chr9	+	2588	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	16	682	-6	-682	multi-exon	TRUE	canonical	3	154	junction_1	46.9081733954962	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	14695965	14745260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
tx.12512	chr9	+	2563	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	43	-682	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	14696040	14745260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
tx.12513	chr9	-	2429	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	17	1518	-11	138	multi-exon	TRUE	canonical	3	139	junction_7	15.3563726777577	178	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAAGTATTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	15191210	15173164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
tx.12514	chr9	-	2647	9	FSM	ENSMUSG00000031938.16	ENSMUST00000178977.9	2650	9	5	-2	5	0	multi-exon	FALSE	canonical	3	15	junction_1	3.64005494464026	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCTTTTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	15217458	15194632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217332
tx.12515	chr9	-	932	8	ISM	ENSMUSG00000031938.16	ENSMUST00000178977.9	2650	9	28	4054	0	13	5prime_fragment	FALSE	canonical	3	17	junction_5	3.32584192194938	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGTCTACCAGTTT	NA	False	NA	NA	False	NA	NA	NA	15217435	15198688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217332
tx.12516	chr9	+	1347	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-35	-307	15	1	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	218	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9087	False	NA	NA	False	NA	NA	NA	15217524	15223401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
tx.12517	chr9	-	534	4	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	53	34627	53	-5140	5prime_fragment	FALSE	canonical	3	124	junction_1	14.522013940528	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAGAAATGTTAATGA	9760	False	NA	NA	False	NA	NA	NA	15269031	15263019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_15263112_15264194_15264396_15265901_15266033_15268921
tx.12518	chr9	+	866	3	FSM	ENSMUSG00000058173.13	ENSMUST00000215907.2	994	3	131	-3	131	0	multi-exon	FALSE	canonical	2	6	junction_1	1	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTCTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	15404858	15456556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_15404926_15436923_15437001_15455834
tx.12519	chr9	+	2202	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	146	3441	-29	1988	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	333	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8511	False	NA	NA	False	NA	NA	NA	18203566	18225297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
tx.1252	chr10	-	3074	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	13	-3	-3	3	multi-exon	FALSE	canonical	3	189	junction_4	16.3291151015602	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	115198139	115176643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
tx.12520	chr9	+	2582	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-11	5	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGCTCTTTATTGTTGT	NA	False	NA	NA	False	NA	NA	NA	19533386	19559639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
tx.12521	chr9	-	626	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	43	-61	43	61	multi-exon	FALSE	canonical	3	31	junction_1	0.5	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTATTGTGAACATCATT	NA	False	NA	NA	False	NA	NA	NA	20296430	20263815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20264138_20265359_20265546_20296312
tx.12522	chr9	+	2600	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	152	10222	-48	-7	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACAGCAGCTGAGTTTC	-6	True	NA	NA	False	NA	NA	NA	20492772	20506483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
tx.12523	chr9	+	2715	7	FSM	ENSMUSG00000058192.17	ENSMUST00000140668.8	2661	7	-56	2	-56	-2	multi-exon	FALSE	canonical	2	6	junction_4	12.0369800568452	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGCTGAGTTTCATGAT	-14	True	NA	NA	False	NA	NA	NA	20492764	20506488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20500752_20500855_20502108_20502181_20502634_20502718_20504456
tx.12524	chr9	-	1814	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	275	-3	-218	0	multi-exon	TRUE	canonical	3	69	junction_2	12	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	NA	False	NA	NA	NA	20553827	20549081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20550495_20553319_20553393_20553499
tx.12525	chr9	-	1772	4	FSM	ENSMUSG00000066892.15	ENSMUST00000131343.8	761	4	4	-1015	1	0	multi-exon	FALSE	canonical	3	9	junction_3	34.3446583263767	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	NA	False	NA	NA	NA	20556050	20549081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20550495_20553319_20553393_20555490_20555595_20555868
tx.12526	chr9	+	450	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	1488	176	-15	11	multi-exon	FALSE	canonical	3	1046	junction_4	63.2114507031756	1140	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTTGTGTGAGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	20556101	20558084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
tx.12527	chr9	+	940	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	10	2893	10	-2893	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	2020	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGGTCCTGTATCATT	NA	False	NA	NA	False	NA	NA	NA	20563400	20574987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
tx.12528	chr9	-	1792	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	105	-2	105	-1	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGTTGTTTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	20657540	20578986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
tx.12529	chr9	+	1664	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	13	6	-3	-6	multi-exon	TRUE	canonical	3	59	junction_6	22.3469853694417	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAGAGTAATAGCCTT	NA	False	NA	NA	False	NA	NA	NA	20779950	20785597	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
tx.1253	chr10	-	2895	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	66.9842435867487	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGACTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	115198154	115176647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115197956
tx.12530	chr9	+	1687	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	0	-118	intron_retention	FALSE	canonical	3	88	junction_5	14.0118997046558	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTGTGCAAAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	20779953	20785485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784561_20784837
tx.12531	chr9	-	1083	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1501	-3	1501	3	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTTCCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	20789522	20785100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
tx.12532	chr9	+	1586	11	FSM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	84	0	-6	0	multi-exon	FALSE	canonical	3	766	junction_9	65.2172523186925	623	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	NA	False	NA	NA	NA	20799554	20803474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
tx.12533	chr9	+	569	2	ISM	ENSMUSG00000004100.13	ENSMUST00000147780.2	1834	9	3241	0	888	0	3prime_fragment	FALSE	canonical	3	890	junction_1	0	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	NA	False	NA	NA	NA	20802821	20803474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_20803044_20803127
tx.12534	chr9	-	1091	11	FSM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	10	0	-7	0	multi-exon	FALSE	canonical	3	2112	junction_10	212.212370044727	485	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5149	False	NA	NA	False	NA	NA	NA	20809909	20805644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
tx.12535	chr9	-	2817	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	-14	3591	-14	2297	multi-exon	FALSE	canonical	3	250	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGGTTATGTGTGTG	8080	False	NA	NA	False	NA	NA	NA	20888091	20877247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20879867_20887893
tx.12536	chr9	+	1120	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	160	8	-17	0	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	20914193	20920127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
tx.12537	chr9	+	2532	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	0	3	0	-3	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGTGAGTTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	20927280	20940110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
tx.12539	chr9	-	878	4	FSM	ENSMUSG00000079677.3	ENSMUST00000215631.2	681	4	-21	-176	-5	1	multi-exon	FALSE	canonical	3	225	junction_3	51.1881062574327	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	20984823	20978814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20979222_20979325_20979414_20984370_20984615_20984684
tx.1254	chr10	-	1243	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	3	1344	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	71.1213751273132	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCCCGTGTTCCATTG	NA	False	NA	NA	False	NA	NA	NA	115198395	115178303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115198291
tx.12540	chr9	-	800	5	FSM	ENSMUSG00000079677.3	ENSMUST00000010348.7	812	5	13	-1	-9	1	multi-exon	FALSE	canonical	3	216	junction_3	56.6171352154098	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	20984827	20978814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20984684
tx.12541	chr9	-	3461	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	9	0	9	0	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	21003295	20985453	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
tx.12542	chr9	-	1645	5	FSM	ENSMUSG00000032175.12	ENSMUST00000214864.2	1662	5	30	-13	19	13	multi-exon	FALSE	canonical	3	60	junction_4	20.5106679559687	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTGTTGTTGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	21042509	21034741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
tx.12543	chr9	-	1617	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	25	6209	-15	1522	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	516	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	21061253	21050726	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
tx.12544	chr9	+	1620	4	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8054	-14	8054	14	3prime_fragment	FALSE	canonical	3	21	junction_2	2.62466929133727	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGTAGATGCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	21116054	21122937	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_21116421_21116586_21116710_21117440_21117624_21121989
tx.12545	chr9	-	2941	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	231	0	-27	0	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	NA	False	NA	NA	NA	21150136	21141026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
tx.12546	chr9	-	2920	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	230	1	-23	0	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	NA	False	NA	NA	NA	21150398	21141026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
tx.12547	chr9	+	1920	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	6	4025	3	2	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGGCGTTGTTGACA	8640	False	NA	NA	False	NA	NA	NA	21176594	21185043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
tx.12548	chr9	+	1893	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_8	152.03800694417	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGGCGTTGTTGACA	8640	False	NA	NA	False	NA	NA	NA	21176594	21185043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184113_21184207_21184549
tx.12549	chr9	-	2601	19	FSM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	-3	0	-3	0	multi-exon	TRUE	canonical	3	91	junction_10	26.4070697604511	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCCCATCCCTTCCCA	NA	False	NA	NA	False	NA	NA	NA	21199268	21184752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
tx.1255	chr10	-	1627	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	-336	3679	-328	-2611	multi-exon	FALSE	canonical	3	8	junction_1	6.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTTGTTTCTTTGTTT	2032	False	NA	NA	False	NA	NA	NA	115220676	115207987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_115208852_115212256_115212453_115220109
tx.12550	chr9	-	1204	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	166	53	11	3	multi-exon	FALSE	canonical	3	236	junction_1	0	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTGTTTTGTGTGATTA	NA	False	NA	NA	False	NA	NA	NA	21202438	21199758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21200629_21202104
tx.12551	chr9	-	1755	11	FSM	ENSMUSG00000003309.15	ENSMUST00000003397.9	1706	11	-46	-3	-20	3	multi-exon	FALSE	canonical	3	12	junction_6	5.23545604508337	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGTGCTTCTTGGGT	1299	False	NA	NA	False	NA	NA	NA	21223653	21206753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214062_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
tx.12552	chr9	+	3443	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	16	-3	16	0	multi-exon	FALSE	canonical	3	114	junction_21	32.3776608971381	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5752	False	NA	NA	False	NA	NA	NA	21249139	21266324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
tx.12553	chr9	+	1121	3	ISM	ENSMUSG00000032178.15	ENSMUST00000215169.2	2118	10	5712	-3	-452	2	3prime_fragment	FALSE	canonical	3	965	junction_1	190.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	NA	False	NA	NA	NA	21314476	21316659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_21314798_21315355_21315488_21315991
tx.12554	chr9	+	1324	10	FSM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	-3	-5	-3	5	multi-exon	FALSE	canonical	3	687	junction_5	65.5845510263914	302	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTCTGTCTTCTT	2366	False	NA	NA	False	NA	NA	NA	21323129	21331575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
tx.12555	chr9	+	3511	21	FSM	ENSMUSG00000033335.18	ENSMUST00000072362.14	3502	21	-17	8	-4	-6	multi-exon	TRUE	canonical	2	327	junction_20	112.703715555433	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTACGTGTGTGGG	5862	False	NA	NA	False	NA	NA	NA	21336223	21418428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
tx.12556	chr9	+	3487	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	224	junction_13	132.11218266634	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTACGTGTGTGGGCCTTT	5879	False	NA	NA	False	NA	NA	NA	21336240	21418433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
tx.12557	chr9	+	3022	21	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	2	156	junction_20	136.611712528612	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGCAGATGTGTCTC	5885	False	NA	NA	False	NA	NA	NA	21336246	21419052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
tx.12558	chr9	+	1633	6	ISM	ENSMUSG00000033335.18	ENSMUST00000115404.11	3455	21	74327	-14	5360	0	3prime_fragment	FALSE	canonical	3	327	junction_5	148.349047856735	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	21410598	21418434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
tx.12559	chr9	-	1320	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	58	0	-7	0	multi-exon	FALSE	canonical	3	533	junction_2	14.8548533034381	657	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	NA	False	NA	NA	NA	21421490	21418850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
tx.1256	chr10	-	1413	2	FSM	ENSMUSG00000020137.6	ENSMUST00000020346.6	3681	2	-350	2618	-317	-2618	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGGGCAAGGTTTGTTTC	2043	False	NA	NA	False	NA	NA	NA	115220665	115207994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_115208852_115220109
tx.12560	chr9	-	2131	8	FSM	ENSMUSG00000032182.16	ENSMUST00000034700.15	2174	8	52	-9	-4	9	multi-exon	FALSE	canonical	3	66	junction_3	11.8062591493682	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGACCATGTGGCCTG	6120	False	NA	NA	False	NA	NA	NA	21504072	21499968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
tx.12561	chr9	-	2036	9	ISM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	15	-9	15	9	intron_retention	FALSE	canonical	3	66	junction_4	11.9032558571174	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGACCATGTGGCCTG	6139	False	NA	NA	False	NA	NA	NA	21504053	21499968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
tx.12562	chr9	-	1911	10	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	17.7478915457862	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGCCCATGGTGACCA	6117	False	NA	NA	False	NA	NA	NA	21504075	21499977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
tx.12563	chr9	-	1926	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	-32	0	6	0	multi-exon	FALSE	canonical	3	27	junction_9	21.338541031039	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGCCCATGGTGACCA	6092	False	NA	NA	False	NA	NA	NA	21504100	21499977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
tx.12564	chr9	-	2019	9	FSM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	-1	-4	-1	0	multi-exon	FALSE	canonical	3	41	junction_8	18.6463803457937	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGCCCATGGTGACCA	6085	False	NA	NA	False	NA	NA	NA	21504107	21499977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
tx.12565	chr9	-	2010	9	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	27	junction_8	22.544400635191	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCACGCCCATGGTGA	6081	False	NA	NA	False	NA	NA	NA	21504111	21499980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
tx.12566	chr9	+	1953	10	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	-31	60778	-31	-43640	5prime_fragment	FALSE	canonical	3	544	junction_6	59.085625249388	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTTCGCTGGGCCTGAC	1301	False	NA	NA	False	NA	NA	NA	21527528	21553884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720
tx.12567	chr9	+	670	3	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	84628	-1	65125	1	3prime_fragment	FALSE	canonical	3	777	junction_1	40.5	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	NA	False	NA	NA	False	NA	NA	NA	21612187	21614663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_21612283_21612383_21612527_21614231
tx.12568	chr9	+	4471	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	156	0	0	0	multi-exon	FALSE	canonical	3	262	junction_7	34.4140270749526	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1929	False	NA	NA	False	NA	NA	NA	21634934	21661215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
tx.12569	chr9	-	1235	5	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	158	junction_4	926.927552454883	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAAGTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	21671603	21666739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671547
tx.1257	chr10	-	2859	17	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_15	145.637593339598	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	116417405	116321069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
tx.12570	chr9	-	1168	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	3	195	2	-195	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	929	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	21671596	21666932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
tx.12571	chr9	-	923	4	ISM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	2536	196	52	-196	3prime_fragment	FALSE	canonical	3	2257	junction_1	41.9841239835568	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAACAAACAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	21669063	21666933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980
tx.12572	chr9	-	675	3	ISM	ENSMUSG00000032198.10	ENSMUST00000034728.9	6467	49	50821	0	2187	0	intron_retention	FALSE	canonical	3	246	junction_2	18	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	NA	False	NA	NA	False	NA	NA	NA	21713110	21711475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_21711696_21712466_21712629_21712817
tx.12573	chr9	-	1908	15	NNC	ENSMUSG00000032198.10	novel	1868	15	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	52.93955929903	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCTGTTCTCTTTTAT	6256	False	NA	NA	False	NA	NA	NA	21763931	21748639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_21748864_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
tx.12574	chr9	-	1873	15	FSM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	-2	-3	0	3	multi-exon	FALSE	canonical	3	13	junction_1	50.5494807094989	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCCTCTGTTCTCTTTT	6273	False	NA	NA	False	NA	NA	NA	21763914	21748641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21748848_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
tx.12575	chr9	-	2259	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	42	1534	-11	-383	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTATGTTCTTAAGAT	2275	False	NA	NA	False	NA	NA	NA	21829446	21820320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
tx.12576	chr9	-	705	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	82	-2	82	1	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCATGGTCATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	21838676	21832302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
tx.12577	chr9	+	2635	10	NIC	ENSMUSG00000040563.14	novel	2626	10	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_8	8.37692303332034	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTCTGCCTGCCT	75	False	NA	NA	False	NA	NA	NA	21848306	21860203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858349_21858676_21858729_21858899
tx.12578	chr9	+	1838	2	FSM	ENSMUSG00000051238.7	ENSMUST00000053583.7	1838	2	2	-2	2	2	multi-exon	FALSE	canonical	3	72	junction_1	0	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGACTCTGGTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	21867052	21869562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21867301_21867972
tx.12579	chr9	+	2022	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	-10	0	-10	0	multi-exon	TRUE	canonical	3	461	junction_11	125.012497645132	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	21914303	21925518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
tx.1258	chr10	-	2801	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	0	-1	0	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	116417405	116321069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
tx.12580	chr9	+	2044	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	-58	-3	-10	1	multi-exon	FALSE	canonical	3	290	junction_11	154.653737577573	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTGTTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	21914303	21925519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
tx.12581	chr9	-	1116	6	ISM	ENSMUSG00000066839.13	ENSMUST00000179422.8	1462	8	8931	0	8931	0	3prime_fragment	TRUE	canonical	3	217	junction_4	15.0811140172071	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	4331	False	NA	NA	False	NA	NA	NA	21987767	21983541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523
tx.12582	chr9	-	1668	9	FSM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	8	0	-3	0	multi-exon	FALSE	canonical	3	90	junction_8	49.2772767104677	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5893	False	NA	NA	False	NA	NA	NA	21996726	21983541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
tx.12583	chr9	-	881	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	7	0	7	0	multi-exon	FALSE	canonical	3	357	junction_2	52.5	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCCGCTGTACTTCTT	7951	False	NA	NA	False	NA	NA	NA	22028461	22024286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_22024976_22025103_22025240_22028405
tx.12584	chr9	-	1363	5	NNC	ENSMUSG00000001348.16	novel	1356	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	83.7048385698222	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	9052	False	NA	NA	False	NA	NA	NA	22042971	22038022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042885
tx.12585	chr9	-	1409	5	FSM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	-53	0	-37	0	multi-exon	FALSE	canonical	3	129	junction_4	52.4374627532645	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	8859	False	NA	NA	False	NA	NA	NA	22043164	22038022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032
tx.12586	chr9	+	679	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	0	16	0	-16	multi-exon	FALSE	canonical	3	566	junction_1	0	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCATCCAAAGACTGTT	NA	False	NA	NA	False	NA	NA	NA	22068141	22069638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_22068210_22069027
tx.12587	chr9	+	732	2	FSM	ENSMUSG00000010607.9	ENSMUST00000148088.2	676	2	-37	-19	-37	-14	multi-exon	FALSE	canonical	3	126	junction_1	0	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCCAAAGACTGTTTC	NA	False	NA	NA	False	NA	NA	NA	22068204	22069640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_22068324_22069027
tx.12588	chr9	+	973	2	FSM	ENSMUSG00000057982.9	ENSMUST00000213350.2	597	2	-15	-361	-6	-351	multi-exon	FALSE	canonical	3	166	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	734	False	NA	NA	False	NA	NA	NA	22137003	22147163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_22137129_22146315
tx.12589	chr9	+	1575	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-44	-218	-6	-32	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCGTCTTGTGCTGGC	734	False	NA	NA	False	NA	NA	NA	22137003	22150957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
tx.1259	chr10	-	2387	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	144.203246804255	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	NA	False	NA	NA	NA	116417405	116321072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
tx.12590	chr9	-	3599	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	-24	-1	-24	1	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGTCTGAGATGTAGG	NA	False	NA	NA	False	NA	NA	NA	22171215	22158724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
tx.12591	chr9	-	1350	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	-51	1939	-41	380	multi-exon	FALSE	canonical	3	16	junction_6	8.19407451411428	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCTGTACATCACAGGAC	NA	False	NA	NA	False	NA	NA	NA	22218985	22189982	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
tx.12592	chr9	+	1177	2	ISM	ENSMUSG00000036411.11	ENSMUST00000058868.9	2223	7	-38	19667	-38	-10091	5prime_fragment	FALSE	canonical	3	18	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTTCTCTGACTAGA	NA	False	NA	NA	False	NA	NA	NA	22322770	22336310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_22323046_22335408
tx.12593	chr9	-	463	3	Antisense	novelGene_ENSMUSG00000035919.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTACAATGTATTTTCCA	NA	False	NA	NA	False	NA	NA	NA	22630359	22623893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr9_-_22624159_22626592_22626676_22630244
tx.12594	chr9	-	2496	16	ISM	ENSMUSG00000043067.16	ENSMUST00000115277.9	4747	23	25292	1466	25292	-1191	3prime_fragment	TRUE	canonical	3	255	junction_7	20.2084690717091	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGTGTAGAGTGAGTA	NA	False	NA	NA	False	NA	NA	NA	24373918	24324537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872
tx.12595	chr9	+	951	2	NNC	ENSMUSG00000100002.3	novel	921	3	NA	NA	-232	-7357	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAGAAGAGTGGAGTT	NA	False	NA	NA	False	NA	NA	NA	25063177	25079500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_25063484_25078855
tx.12596	chr9	+	2375	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	13	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	624	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTGTCTTGTATAT	NA	False	NA	NA	False	NA	NA	NA	25163884	25219864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
tx.12597	chr9	-	1741	5	ISM	ENSMUSG00000031969.17	ENSMUST00000129490.8	3188	7	11744	373	-1354	-364	3prime_fragment	FALSE	canonical	3	229	junction_2	13.7727085208393	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTAACAATAAGAAATTTA	6390	False	NA	NA	False	NA	NA	NA	26890605	26885803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471
tx.12598	chr9	-	2058	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	5	408	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTCTCCTAAGGCAGT	9253	False	NA	NA	False	NA	NA	NA	26910840	26886263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
tx.12599	chr9	-	1411	6	ISM	ENSMUSG00000031969.17	ENSMUST00000129490.8	3188	7	5461	835	5461	406	3prime_fragment	FALSE	canonical	3	224	junction_5	15.0811140172071	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTCTCCTAAGGCA	107	False	NA	NA	False	NA	NA	NA	26896888	26886265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758
tx.126	chr1	-	1108	3	ISM	ENSMUSG00000018417.15	ENSMUST00000151525.8	3045	7	-13	51955	3	9	5prime_fragment	FALSE	canonical	3	305	junction_2	6	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGATTATAA	NA	False	NA	NA	False	NA	NA	NA	51955084	51901794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_51902594_51922241_51922386_51954919
tx.1260	chr10	-	2679	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	10	4	0	0	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	116417406	116321069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
tx.12600	chr9	-	1844	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	5	1010	5	222	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGATTTTTTATTTGG	9253	False	NA	NA	False	NA	NA	NA	26910840	26886449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
tx.12601	chr9	+	803	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	-24	-4	-24	0	multi-exon	FALSE	canonical	3	323	junction_6	112.305634567263	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAAGTGTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	26910981	26918630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
tx.12602	chr9	+	933	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	-15	0	-3	0	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAAGTGTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	26911002	26918630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
tx.12603	chr9	-	3566	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	13	-4	13	4	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTTTCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	26941348	26919062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
tx.12604	chr9	-	2489	3	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	17264	-2	17229	2	3prime_fragment	FALSE	canonical	3	183	junction_1	4.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGGTCTTTCCTTC	93	False	NA	NA	False	NA	NA	NA	26924097	26919064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_26921334_26921659_26921803_26924020
tx.12605	chr9	+	531	4	ISM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	75	50711	75	-7352	5prime_fragment	FALSE	canonical	3	212	junction_3	15.9373774505092	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCACTCCAAGAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	26942019	26955897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791
tx.12606	chr9	-	1930	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5176	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27032670	27008679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
tx.12607	chr9	-	2000	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4337	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27033509	27008679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
tx.12608	chr9	-	1953	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27066700	27008679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
tx.12609	chr9	+	2941	5	ISM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	22654	5547	4	105	3prime_fragment	FALSE	canonical	3	240	junction_4	54.687178570484	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTGTTTGTTTGACT	NA	False	NA	NA	False	NA	NA	NA	30964595	30981634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
tx.1261	chr10	-	1734	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	114	-4	63	4	multi-exon	TRUE	canonical	3	251	junction_7	35.031985384788	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTGTCTTTCTTAGCTC	NA	False	NA	NA	False	NA	NA	NA	116786222	116742677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
tx.12610	chr9	-	717	2	ISM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	41356	5	12423	-5	3prime_fragment	FALSE	canonical	3	690	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	2410	False	NA	NA	False	NA	NA	NA	31001793	31000702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_31001324_31001697
tx.12611	chr9	-	1279	5	ISM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	35320	5	6387	-5	3prime_fragment	FALSE	canonical	3	541	junction_4	58.8828285665694	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	31007829	31000702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770
tx.12612	chr9	-	3229	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	25	5	25	-5	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	31043124	31000702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
tx.12613	chr9	-	1699	4	FSM	ENSMUSG00000031996.18	ENSMUST00000216921.2	1877	4	180	-2	180	0	multi-exon	FALSE	canonical	3	1185	junction_2	69.5621225156974	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	False	NA	NA	False	NA	NA	NA	31064761	31060852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709
tx.12614	chr9	-	2782	12	ISM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	42950	0	-964	0	3prime_fragment	FALSE	canonical	3	712	junction_10	207.696138506264	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	False	NA	NA	False	NA	NA	NA	31080137	31060852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003
tx.12615	chr9	-	2614	11	ISM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	42946	0	-964	0	3prime_fragment	FALSE	canonical	3	473	junction_10	254.083529572462	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	False	NA	NA	False	NA	NA	NA	31080137	31060852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003
tx.12616	chr9	-	3658	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	-24	0	0	0	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8715	False	NA	NA	False	NA	NA	NA	31123111	31060852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
tx.12617	chr9	-	3490	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-28	0	0	0	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8715	False	NA	NA	False	NA	NA	NA	31123111	31060852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
tx.12618	chr9	+	1941	7	FSM	ENSMUSG00000042496.19	ENSMUST00000117389.8	1952	7	11	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	4.53688586293873	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGAGCATTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	31191844	31241914	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957
tx.12619	chr9	-	1580	6	FSM	ENSMUSG00000041737.9	ENSMUST00000048050.9	1799	6	215	4	-32	-4	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	31375543	31337495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_31338253_31339246_31339393_31339816_31340002_31340265_31340476_31342616_31342817_31375461
tx.1262	chr10	-	816	6	ISM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	31611	-3	1113	3	3prime_fragment	FALSE	canonical	3	300	junction_4	32.4752213233413	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTCTTTCTTAGCT	NA	False	NA	NA	False	NA	NA	NA	116754725	116742678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666
tx.12620	chr9	-	1646	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_5	6.40624695121879	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTGTCTCATCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	34900007	34889330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34899788
tx.12621	chr9	-	1572	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_5	6.15142259969188	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTGTCTCATCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	34901180	34889330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34901035
tx.12622	chr9	-	1461	5	ISM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	63463	0	2384	0	3prime_fragment	FALSE	canonical	3	169	junction_1	11.8638105177047	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	34964706	34957871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667
tx.12623	chr9	-	2085	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	10	0	10	0	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	35028159	34957871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
tx.12624	chr9	-	1364	7	NNC	ENSMUSG00000032040.16	novel	1274	6	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	302.376375105963	31	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGTAGCCCAGTAG	NA	False	NA	NA	False	NA	NA	NA	35087306	35035703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_35036141_35037206_35037348_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
tx.12625	chr9	-	1224	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	50	0	-18	0	multi-exon	FALSE	canonical	3	621	junction_4	33.1083071146804	458	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGTAGCCCAGTAG	NA	False	NA	NA	False	NA	NA	NA	35087307	35035703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
tx.12626	chr9	-	2312	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	53	-582	11	23	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGCCAAGAAAG	7988	False	NA	NA	False	NA	NA	NA	35111213	35098057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
tx.12627	chr9	-	2333	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	0	-23	0	23	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGCCAAGAAAG	7977	False	NA	NA	False	NA	NA	NA	35111224	35098057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
tx.12628	chr9	-	2211	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	78	0	3	0	multi-exon	TRUE	canonical	3	179	junction_9	18.9747200242849	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122273	35115503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
tx.12629	chr9	+	2744	13	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	834	1	95	-1	3prime_fragment	FALSE	canonical	3	518	junction_3	143.15344816742	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTAGGTTCATATTATT	6346	False	NA	NA	False	NA	NA	NA	35123284	35128309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
tx.1263	chr10	-	1096	8	ISM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	22185	-2	-8313	2	3prime_fragment	FALSE	canonical	3	251	junction_7	37.6145868361882	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTGTCTTTCTTAGC	NA	False	NA	NA	False	NA	NA	NA	116764151	116742679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093
tx.12630	chr9	+	2980	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	9	4	9	-4	multi-exon	TRUE	canonical	3	518	junction_4	138.528744373691	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5521	False	NA	NA	False	NA	NA	NA	35122459	35128306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
tx.12631	chr9	+	1638	5	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	3490	4	-254	-4	3prime_fragment	FALSE	canonical	3	822	junction_1	93.5227245112117	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	9002	False	NA	NA	False	NA	NA	NA	35125940	35128306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
tx.12632	chr9	-	1624	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	25	211	0	4	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCTCTACTTTGAAGA	6389	False	NA	NA	False	NA	NA	NA	35179076	35128526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
tx.12633	chr9	-	1397	7	FSM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	-1	266	-1	4	multi-exon	FALSE	canonical	3	54	junction_4	50.0954644209988	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCTCTACTTTGAAGA	6388	False	NA	NA	False	NA	NA	NA	35179077	35128526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
tx.12634	chr9	-	1629	8	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	45.5246064883417	34	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCTCTACTTTGAAGA	6381	False	NA	NA	False	NA	NA	NA	35179084	35128526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
tx.12635	chr9	+	1821	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAATTTTTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	35179160	35187261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
tx.12636	chr9	+	1890	6	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	3	-2	intron_retention	FALSE	canonical	3	136	junction_5	9.97196068985433	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTAATTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	35179163	35187259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35184143_35184763_35184862_35186359
tx.12637	chr9	-	1702	12	FSM	ENSMUSG00000032101.7	ENSMUST00000034612.7	6934	12	32	5200	32	-5200	multi-exon	FALSE	canonical	3	22	junction_11	3.32533475603125	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGAGGGCTCTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	35469792	35453142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_35453356_35454893_35455083_35457109_35457273_35458076_35458315_35462580_35462759_35464132_35464248_35465602_35465706_35465812_35465906_35468061_35468198_35468677_35468726_35468980_35469048_35469633
tx.12638	chr9	+	1755	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	6	258	0	5	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTCTTTTTCAAGGC	NA	False	NA	NA	False	NA	NA	NA	35470761	35478439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
tx.12639	chr9	+	1847	3	ISM	ENSMUSG00000032103.11	ENSMUST00000135768.2	2144	4	871	-5	0	5	3prime_fragment	FALSE	canonical	3	88	junction_2	8	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTCTTTTTCAAGGC	NA	False	NA	NA	False	NA	NA	NA	35470761	35478439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_35470814_35476079_35477152_35477716
tx.1264	chr10	-	1934	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	26	-1	-25	1	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	1791	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTACTGATCTGTA	NA	False	NA	NA	False	NA	NA	NA	116899693	116886904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
tx.12640	chr9	+	2301	3	FSM	ENSMUSG00000032103.11	ENSMUST00000121246.2	2016	3	21	-306	21	7	multi-exon	FALSE	canonical	3	99	junction_2	2.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTTTTTCAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	35470782	35478441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_35470814_35476079_35476494_35476585
tx.12641	chr9	-	1678	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	295	0	-6	0	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAACCTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	35481399	35472115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
tx.12642	chr9	-	2662	12	FSM	ENSMUSG00000032113.17	ENSMUST00000172702.9	3797	12	180	955	180	3	multi-exon	FALSE	canonical	3	367	junction_7	38.0821209215597	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTCCTGTATTCCTTT	1112	False	NA	NA	False	NA	NA	NA	36637490	36620732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092
tx.12643	chr9	-	2385	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	55	957	-18	1	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGGTCCTGTATTCCT	703	False	NA	NA	False	NA	NA	NA	36637899	36620734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
tx.12644	chr9	-	2739	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	60	3068	0	14	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	243	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGTGCTGTTTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	36678915	36643707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
tx.12645	chr9	-	2143	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	81	-4	-39	4	multi-exon	TRUE	canonical	3	488	junction_2	34.4551882885582	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	NA	False	NA	NA	NA	36708608	36690450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
tx.12646	chr9	-	2127	11	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	21	4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	160.762060200782	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	NA	False	NA	NA	NA	36708636	36690450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708552
tx.12647	chr9	+	1730	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	62	2	-18	2	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCATGGTTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	36744041	36790218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
tx.12648	chr9	-	3539	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	93	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATGCACAGTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	37058610	36802277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
tx.12649	chr9	+	1048	4	NNC	ENSMUSG00000032121.10	novel	2619	4	NA	NA	4	-1502	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	19.2527054375915	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGGCTGCAGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	37119522	37134494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_37119637_37129561_37129673_37130497_37130601_37133774
tx.1265	chr10	-	1392	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	16	-81	-1	80	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	260	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTGCTTTGATCATA	3387	False	NA	NA	False	NA	NA	NA	117060396	117051045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
tx.12650	chr9	+	1039	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	91	1489	91	-1489	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTATGTTTACATTT	NA	False	NA	NA	False	NA	NA	NA	37119609	37134507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
tx.12651	chr9	-	2697	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	324	2922	0	5	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAAGATTGGTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	37166710	37141802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
tx.12652	chr9	+	1787	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	102	-1466	-33	33	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTGTGCTAGTTGAG	778	False	NA	NA	False	NA	NA	NA	37400997	37435479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
tx.12653	chr9	-	692	5	FSM	ENSMUSG00000001948.11	ENSMUST00000002013.11	696	5	0	4	0	-4	multi-exon	TRUE	canonical	2	6	junction_2	1.92028643696715	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTTGTGGTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	37525018	37514589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_37514783_37517088_37517167_37518912_37518984_37523131_37523315_37524851
tx.12654	chr9	+	661	4	NNC	ENSMUSG00000001942.9	novel	1498	7	NA	NA	-21	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	21.6024689946929	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTAGAGTACTTTTATA	NA	False	NA	NA	False	NA	NA	NA	37525101	37534943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_37525223_37528095_37528258_37534194_37534371_37534741
tx.12655	chr9	+	2697	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	145	2105	-12	563	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGCGATGCATCCAT	NA	False	NA	NA	False	NA	NA	NA	37525110	37558846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
tx.12656	chr9	-	1488	9	FSM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	72	424	-3	-5	multi-exon	FALSE	canonical	3	1493	junction_6	94.6836839165017	1357	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTTATTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	37568536	37560482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
tx.12657	chr9	-	2443	3	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_1	16.5	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGCCATTATGACCAT	NA	False	NA	NA	False	NA	NA	NA	40151205	40106695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr9_-_40108959_40121021_40121120_40151123
tx.12658	chr9	-	1725	2	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGTGTACTGTCCTGTA	NA	False	NA	NA	False	NA	NA	NA	40151205	40145704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr9_-_40147348_40151123
tx.12659	chr9	-	2337	19	NNC	ENSMUSG00000040111.18	novel	7445	19	NA	NA	-276	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	6.45975193499939	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTATATACAGATTT	NA	False	NA	NA	False	NA	NA	NA	40245100	40209192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40245038
tx.1266	chr10	+	540	4	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	4.18993502999218	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGCAATAGTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	117060423	117063911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_+_117060473_117062495_117062653_117063449_117063496_117063623
tx.12660	chr9	+	2106	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	288	0	-4	0	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2455	False	NA	NA	False	NA	NA	NA	40712567	40716496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
tx.12661	chr9	-	2280	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	-41	2548	-41	590	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTATTATCCACTTAAAT	NA	False	NA	NA	False	NA	NA	NA	42175593	42165438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
tx.12662	chr9	-	412	2	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGTCAGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	42600839	42600330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr9_-_42600590_42600686
tx.12663	chr9	+	1732	4	FSM	ENSMUSG00000032011.6	ENSMUST00000114840.2	1735	4	3	0	3	0	multi-exon	FALSE	canonical	3	7	junction_3	3.74165738677394	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGTCTGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	43954683	43959876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_43954774_43957253_43957316_43957910_43958250_43958635
tx.12664	chr9	+	461	3	ISM	ENSMUSG00000032011.6	ENSMUST00000114840.2	1735	4	28	1632	28	2	5prime_fragment	FALSE	canonical	3	10	junction_1	3	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGTGAGACTGGTTCCC	NA	False	NA	NA	False	NA	NA	NA	43954708	43958244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_43954774_43957253_43957316_43957910
tx.12665	chr9	+	1568	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	-19	508	-19	-24	multi-exon	FALSE	canonical	3	22	junction_1	11.7473401244707	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAAAAAACCAAC	2229	False	NA	NA	False	NA	NA	NA	43996216	44005266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
tx.12666	chr9	+	2887	16	FSM	ENSMUSG00000032135.16	ENSMUST00000034650.15	2989	16	99	3	0	0	multi-exon	FALSE	canonical	3	21	junction_3	5.20085463062456	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGATGCTGTGTTCCATT	7	False	NA	NA	False	NA	NA	NA	44045957	44054021	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
tx.12667	chr9	+	1904	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	8	293	8	-287	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCATCCCCTCCCTCTG	3782	False	NA	NA	False	NA	NA	NA	44238149	44244904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
tx.12668	chr9	+	1569	8	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	688	294	-450	-288	3prime_fragment	FALSE	canonical	3	234	junction_1	26.2880433750745	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGCATCCCCTCCCTCT	4462	False	NA	NA	False	NA	NA	NA	44238829	44244903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
tx.12669	chr9	-	1554	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	42	9	42	4	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	650	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTCTGAGACCTTTCTG	1450	False	NA	NA	False	NA	NA	NA	44255483	44247644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
tx.1267	chr10	-	3802	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-44	-1531	0	1528	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGATTTTGTACTAATT	4471	False	NA	NA	False	NA	NA	NA	117212878	117183415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.12670	chr9	+	4392	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	33	7	-23	-1	multi-exon	TRUE	canonical	3	476	junction_1	89.8853847964173	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	44290819	44303659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
tx.12671	chr9	+	2036	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	98	-6	98	0	multi-exon	FALSE	canonical	1	5	junction_1	8.7740740252177	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGGCTCATCCTTT	NA	False	NA	NA	False	NA	NA	NA	44308246	44314263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
tx.12672	chr9	-	981	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	241	-2	3	2	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	508	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCTCCTAACTGATCA	1714	False	NA	NA	False	NA	NA	NA	44318656	44315053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
tx.12673	chr9	-	841	4	FSM	ENSMUSG00000032112.11	ENSMUST00000213747.2	935	4	34	60	-30	1	multi-exon	FALSE	canonical	3	851	junction_3	13.0213499897497	252	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCTCCTAACTGATC	2001	False	NA	NA	False	NA	NA	NA	44318369	44315054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100
tx.12674	chr9	+	526	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	519	235	-2	0	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	2294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGGTGCATCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	44318954	44321489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
tx.12675	chr9	-	1205	11	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	9.58331884056875	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGATTGAACCTGTAAA	8958	False	NA	NA	False	NA	NA	NA	44329318	44321455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
tx.12676	chr9	-	1202	11	FSM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	523	0	-7	0	multi-exon	FALSE	canonical	3	28	junction_6	11.2853887837327	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGATTGAACCTGTAAA	8933	False	NA	NA	False	NA	NA	NA	44329343	44321455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
tx.12677	chr9	-	1242	11	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	18.7179058657746	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCTGATTGAACCTGTA	8912	False	NA	NA	False	NA	NA	NA	44329364	44321457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324341_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
tx.12678	chr9	-	804	3	ISM	ENSMUSG00000074397.6	ENSMUST00000215980.2	676	4	-148	226	-27	-226	5prime_fragment	FALSE	canonical	3	31	junction_1	2.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGACCTGGACCCTGGG	9187	False	NA	NA	False	NA	NA	NA	44352460	44347077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_44347400_44347500_44347576_44352053
tx.12679	chr9	-	1097	5	FSM	ENSMUSG00000041523.4	ENSMUST00000047740.4	1083	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	6	junction_2	1.4790199457749	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCGACCATGTCTATGTG	8939	False	NA	NA	False	NA	NA	NA	44366287	44364011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_44364407_44364779_44364851_44365091_44365231_44365358_44365491_44365927
tx.1268	chr10	-	1206	2	ISM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	20909	-694	36	691	3prime_fragment	FALSE	canonical	3	577	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTGTGTGTGTATTCCT	NA	False	NA	NA	False	NA	NA	NA	117191925	117184252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_117185373_117191839
tx.12680	chr9	-	1624	3	NNC	ENSMUSG00000048537.17	novel	3485	16	NA	NA	3948	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	1577	False	NA	NA	False	NA	NA	NA	44603780	44597604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_44598996_44599913_44600000_44603633
tx.12681	chr9	-	2152	3	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	17451	576	114	-576	3prime_fragment	FALSE	canonical	3	1046	junction_2	67.5	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACTGGACTCTAAC	NA	False	NA	NA	False	NA	NA	NA	44661691	44653436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_44655314_44656714_44656920_44661621
tx.12682	chr9	-	3478	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	18	576	18	-576	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACTGGACTCTAAC	NA	False	NA	NA	False	NA	NA	NA	44679124	44653436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
tx.12683	chr9	-	2803	7	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	9152	576	1399	-576	3prime_fragment	FALSE	canonical	3	910	junction_6	83.7496268648404	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACTGGACTCTAAC	2269	False	NA	NA	False	NA	NA	NA	44669990	44653436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857
tx.12684	chr9	+	1569	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-195	-315	-2	0	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCTCATTAGTGTC	NA	False	NA	NA	False	NA	NA	NA	44684254	44702192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
tx.12685	chr9	-	483	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	28	33	-7	20	multi-exon	FALSE	canonical	3	4613	junction_2	56	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGCAGTCATAGTAT	NA	False	NA	NA	False	NA	NA	NA	44832012	44824547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_44824765_44825948_44826110_44831907
tx.12686	chr9	-	1492	7	NNC	ENSMUSG00000032093.8	novel	1462	8	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.64279609239471	3	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATGTCTCTTTTCTTCTG	4717	False	NA	NA	False	NA	NA	NA	44920945	44910036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_44910886_44911732_44911780_44912276_44912445_44913435_44913652_44918463_44918492_44920645_44920748_44920863
tx.12687	chr9	+	2970	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	137	0	-134	0	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	NA	False	NA	NA	NA	44953859	44965313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
tx.12688	chr9	+	3398	6	FSM	ENSMUSG00000070305.11	ENSMUST00000114664.8	3424	6	22	4	-1	-4	multi-exon	FALSE	canonical	3	16	junction_2	3.70944739819828	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACCCTTTTCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	44966505	44988730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44966617_44973338_44973506_44977636_44977848_44979504_44979671_44981953_44982018_44986051
tx.12689	chr9	+	1556	8	FSM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	232	0	-25	0	multi-exon	FALSE	canonical	3	400	junction_2	224.259325108142	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	600	False	NA	NA	False	NA	NA	NA	45281714	45307453	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_45281787_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
tx.1269	chr10	-	2648	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	0	3878	0	488	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTTTCATGCAGTAAT	4474	False	NA	NA	False	NA	NA	NA	117212875	117184455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.12690	chr9	+	1551	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	235	3	-22	1	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	431	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGAGTGGCTTTTCT	603	False	NA	NA	False	NA	NA	NA	45281717	45307454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
tx.12691	chr9	+	590	6	FSM	ENSMUSG00000059412.8	ENSMUST00000041005.6	632	6	42	0	-34	0	multi-exon	FALSE	canonical	3	206	junction_5	6.73498329619309	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGAGTGCTTATCATTC	NA	False	NA	NA	False	NA	NA	NA	45314477	45321576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
tx.12692	chr9	-	3475	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	473	16	3	-16	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGGATGAATTCTTTT	9593	False	NA	NA	False	NA	NA	NA	45817702	45774822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
tx.12693	chr9	-	1913	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	205	4755	-11	1070	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTCCATGGGAAAC	4117	False	NA	NA	False	NA	NA	NA	45896144	45878911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
tx.12694	chr9	+	1319	4	ISM	ENSMUSG00000034135.16	ENSMUST00000153152.2	5465	21	40605	21290	-23587	13	internal_fragment	FALSE	canonical	3	97	junction_3	4.78423336480244	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGTGTTTTTATCAAT	NA	False	NA	NA	False	NA	NA	NA	46107281	46114196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_46107392_46109444_46109599_46109849_46110006_46113297
tx.12695	chr9	+	1843	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	102	1039	-27	120	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTGCGTTCATGTC	NA	False	NA	NA	False	NA	NA	NA	46184463	46192902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
tx.12696	chr9	+	1308	10	ISM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	2309	1039	-84	120	3prime_fragment	FALSE	canonical	3	619	junction_4	46.2756101933344	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTGCGTTCATGTC	NA	False	NA	NA	False	NA	NA	NA	46186670	46192902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
tx.12697	chr9	+	2212	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	0	327	0	0	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCCTAACTGGGTATT	NA	False	NA	NA	False	NA	NA	NA	46194305	46210081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
tx.12698	chr9	+	1865	9	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	257712	2332	257596	19	3prime_fragment	FALSE	canonical	3	143	junction_7	61.313614923604	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	1846	False	NA	NA	False	NA	NA	NA	47699266	47762346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
tx.12699	chr9	+	1432	6	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	269124	2316	269008	35	3prime_fragment	FALSE	canonical	3	143	junction_4	70.5934841185785	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAACACTGAAAAC	1779	False	NA	NA	False	NA	NA	NA	47710678	47762362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
tx.127	chr1	-	842	2	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGGTAGAATCTGGA	1799	False	NA	NA	False	NA	NA	NA	52471136	52459005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_52459574_52470862
tx.1270	chr10	-	2355	10	NIC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	0	189	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCTTGATTTTGATATT	4471	False	NA	NA	False	NA	NA	NA	117212878	117184754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
tx.12700	chr9	-	1059	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	18	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	386	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	NA	False	NA	NA	NA	48391893	48379811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
tx.12701	chr9	-	1897	6	FSM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-18	-12	-13	4	multi-exon	FALSE	canonical	0	0	junction_4	182.483314305719	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCTTTATTTTGACG	NA	False	NA	NA	False	NA	NA	NA	48406612	48399996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582_48405688_48406454
tx.12702	chr9	-	1792	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	-15	-4	-13	4	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	184	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCTTTATTTTGACG	NA	False	NA	NA	False	NA	NA	NA	48406612	48399996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
tx.12703	chr9	-	1004	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	27	12	27	2	multi-exon	FALSE	canonical	3	43	junction_2	2.5	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTCTGAATGCAGT	NA	False	NA	NA	False	NA	NA	NA	48516426	48503188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_48503663_48514653_48514862_48516104
tx.12704	chr9	+	4210	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-77	0	3	0	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	NA	False	NA	NA	NA	48896687	48953810	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
tx.12705	chr9	+	1488	5	FSM	ENSMUSG00000032264.10	ENSMUST00000215706.2	1272	5	-190	-26	-21	26	multi-exon	FALSE	canonical	3	254	junction_4	30.2189923723476	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTGGAAGCAGTAC	NA	False	NA	NA	False	NA	NA	NA	48966891	48973331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354
tx.12706	chr9	+	2888	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	-24	-1	-24	1	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGTGTCTTTAATAAC	NA	False	NA	NA	False	NA	NA	NA	48966888	48990073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
tx.12707	chr9	+	1695	8	ISM	ENSMUSG00000032268.14	ENSMUST00000170246.8	1491	12	3067	-486	145	0	3prime_fragment	TRUE	canonical	2	3	junction_4	3.6922422809486	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTTGCGCTCTCCCCT	3765	False	NA	NA	False	NA	NA	NA	49020446	49028887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_49020756_49022767_49022812_49023487_49023651_49024423_49024603_49025793_49025893_49026332_49026476_49026764_49026918_49028282
tx.12708	chr9	-	2309	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	18	1301	8	-1301	multi-exon	FALSE	canonical	3	14	junction_3	5.49706167646225	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATGTCTGCCGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	49397507	49349563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
tx.12709	chr9	-	933	2	FSM	ENSMUSG00000039542.17	ENSMUST00000217121.2	914	2	-3	-16	0	16	multi-exon	FALSE	canonical	1	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATGAATG	8517	False	NA	NA	False	NA	NA	NA	49710225	49552873	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_49553559_49709977
tx.1271	chr10	-	1476	2	ISM	ENSMUSG00000055531.13	ENSMUST00000177145.8	3819	9	-45	12843	0	-470	5prime_fragment	FALSE	canonical	3	603	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	4471	False	NA	NA	False	NA	NA	NA	117212878	117202552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_117203894_117212743
tx.12710	chr9	-	199	2	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTGGACATGATGTC	9066	False	NA	NA	False	NA	NA	NA	49789886	49787444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr9_-_49787550_49789792
tx.12711	chr9	+	1632	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	5	52	3	-52	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTTCCAACAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	50405829	50416730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
tx.12712	chr9	-	1090	6	FSM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	-44	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	16.1294761229248	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7915	False	NA	NA	False	NA	NA	NA	50439995	50432916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439856
tx.12713	chr9	-	1051	5	NNC	ENSMUSG00000032065.7	novel	895	5	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.8483869768736	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTATTTTTTTATTTT	6974	False	NA	NA	False	NA	NA	NA	50472613	50468114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472482
tx.12714	chr9	-	1008	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	-3	-110	-3	4	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTATTTTTTTATTTT	6974	False	NA	NA	False	NA	NA	NA	50472613	50468114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
tx.12715	chr9	-	1258	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	-12	-15	-12	15	multi-exon	FALSE	canonical	3	1351	junction_3	46.783187863448	1070	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTACTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	50515124	50507641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
tx.12716	chr9	+	512	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	6	0	6	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	751	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTCTTCTAAATCCC	8819	False	NA	NA	False	NA	NA	NA	50515215	50516620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_50515340_50516232
tx.12717	chr9	-	2379	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	184	753	1	-749	multi-exon	FALSE	canonical	3	44	junction_5	32.2800247831379	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCCAGATGTGCC	90	False	NA	NA	False	NA	NA	NA	50528580	50517292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
tx.12718	chr9	-	2999	4	ISM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	4990	0	4790	0	3prime_fragment	FALSE	canonical	3	103	junction_3	13.4742552876052	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTGTTACTTTTTAA	4896	False	NA	NA	False	NA	NA	NA	50523774	50516539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676
tx.12719	chr9	-	1655	2	ISM	ENSMUSG00000059820.15	ENSMUST00000171462.8	3339	7	8037	1094	7837	-1094	3prime_fragment	FALSE	canonical	3	135	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGGCTGGTAGAACAG	7943	False	NA	NA	False	NA	NA	NA	50520727	50517637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_50519237_50520671
tx.1272	chr10	-	3142	11	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	465	15	-1	5	3prime_fragment	FALSE	canonical	3	473	junction_6	30.8506077735918	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTTACACATTTTT	NA	False	NA	NA	False	NA	NA	NA	117546198	117524794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
tx.12720	chr9	-	2639	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	249	1147	249	748	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTGTAGAAGTGGAGCT	NA	False	NA	NA	False	NA	NA	NA	50570831	50547079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
tx.12721	chr9	-	1263	4	FSM	ENSMUSG00000032062.4	ENSMUST00000034564.4	1257	4	-7	1	-7	-1	multi-exon	FALSE	canonical	3	23	junction_3	2.16024689946929	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGATTGATTGTTCCT	2109	False	NA	NA	False	NA	NA	NA	50657843	50650991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
tx.12722	chr9	-	953	4	FSM	ENSMUSG00000037971.11	ENSMUST00000042468.9	2082	4	259	870	-24	3	multi-exon	TRUE	canonical	3	19	junction_2	3.74165738677394	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTGGTGAGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	50679493	50674997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_50675317_50675523_50675591_50675995_50676227_50679157
tx.12723	chr9	+	1986	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	5	667	3	12	multi-exon	TRUE	canonical	3	72	junction_2	7.15454401062709	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGGTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	50679540	50683981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
tx.12724	chr9	+	2485	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	403	-15	55	1	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTTTCAGTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	50686721	50754843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
tx.12725	chr9	+	3216	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	30	184	1	-184	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	17	True	NA	NA	False	NA	NA	NA	50768266	50792547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
tx.12726	chr9	-	920	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-45	0	-35	0	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	992	False	NA	NA	False	NA	NA	NA	51874891	51854605	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
tx.12727	chr9	+	511	5	ISM	ENSMUSG00000032050.19	ENSMUST00000061352.11	1502	11	19116	1976	19116	-1976	internal_fragment	FALSE	canonical	3	794	junction_3	85.0687222191564	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGGAAAGAATAGAAC	NA	False	NA	NA	False	NA	NA	NA	51978686	51984498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453
tx.12728	chr9	-	919	4	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	90786	0	90786	0	3prime_fragment	FALSE	canonical	3	364	junction_1	10.2306728354819	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	False	NA	-19	True	NA	NA	NA	53068567	53009934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470
tx.12729	chr9	-	3189	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-59	-2	-59	2	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTTTTTATTGTATCC	NA	False	NA	NA	False	NA	NA	NA	53159412	53009932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
tx.1273	chr10	-	3040	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	42	17	-2	3	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	NA	False	NA	NA	NA	117546621	117524796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
tx.12730	chr9	-	1387	9	ISM	ENSMUSG00000034218.17	ENSMUST00000232179.2	9787	64	4	79184	4	3295	5prime_fragment	FALSE	canonical	3	33	junction_1	29.3428015022424	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGATTATCTTCAGAAG	NA	False	NA	NA	False	NA	NA	NA	53448036	53429851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
tx.12731	chr9	-	2443	7	FSM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-27	-1173	-27	1173	multi-exon	FALSE	canonical	3	42	junction_1	25.1837690233655	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCATTGGGCTGGTGAG	NA	False	NA	NA	False	NA	NA	NA	53448000	53431973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
tx.12732	chr9	-	1097	6	ISM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-8	2214	-8	-2214	5prime_fragment	FALSE	canonical	3	46	junction_1	21.0770016843004	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTTAAAACAGACCAAAGA	NA	False	NA	NA	False	NA	NA	NA	53447981	53435360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
tx.12733	chr9	-	844	5	ISM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-132	5251	-65	96	5prime_fragment	FALSE	canonical	3	85	junction_4	8.07774721070176	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACGACTCAGAGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	53448105	53438397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
tx.12734	chr9	-	1534	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	24	1847	24	118	multi-exon	FALSE	canonical	3	149	junction_5	11.4912830779187	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTTTGTAAACTT	NA	False	NA	NA	False	NA	NA	NA	53521658	53493668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
tx.12735	chr9	+	2419	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	144	-5	144	5	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAATCACAATGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	53678965	53725443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
tx.12736	chr9	+	2052	7	ISM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	26449	0	-12730	0	3prime_fragment	FALSE	canonical	3	166	junction_5	8.97527467855751	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAGAATCACAATGT	NA	False	NA	NA	False	NA	NA	NA	53705270	53725438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
tx.12737	chr9	+	1721	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-33	715	-3	1	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	1252	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATGATGTAATTTTG	NA	False	NA	NA	False	NA	NA	NA	54493761	54511230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
tx.12738	chr9	-	1268	11	FSM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	28	-6	6	1	multi-exon	FALSE	canonical	3	544	junction_10	185.351584832717	487	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTGTGAACGTGCTG	5449	False	NA	NA	False	NA	NA	NA	54641775	54624441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
tx.12739	chr9	-	1183	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	5	-1	5	1	multi-exon	FALSE	canonical	3	455	junction_10	209.060852385137	261	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTGTGAACGTGCTG	5428	False	NA	NA	False	NA	NA	NA	54641796	54624441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
tx.1274	chr10	-	517	2	ISM	ENSMUSG00000052798.14	ENSMUST00000218576.2	3092	28	41175	0	9868	0	3prime_fragment	FALSE	canonical	3	1034	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	NA	False	NA	NA	NA	117587394	117586525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_117586873_117587224
tx.12740	chr9	+	772	4	FSM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	30	0	30	0	multi-exon	FALSE	canonical	3	250	junction_3	35.3679076125361	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGCTCTTTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	54672061	54680394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_54672256_54672766_54672946_54675667_54675782_54680109
tx.12741	chr9	+	5803	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-38	5	-38	-5	multi-exon	TRUE	canonical	3	193	junction_6	38.4690587449917	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATTTGACTCGTTGTGT	2588	False	NA	NA	False	NA	NA	NA	54771034	54819809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
tx.12742	chr9	+	1121	8	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-34	25151	-34	-16608	5prime_fragment	FALSE	canonical	3	193	junction_6	33.3711350280632	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATATTGTCCTTGGCA	2592	False	NA	NA	False	NA	NA	NA	54771038	54794663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551
tx.12743	chr9	+	2550	5	FSM	ENSMUSG00000035878.14	ENSMUST00000039742.8	5110	5	-25	2585	-25	-2585	multi-exon	FALSE	canonical	2	6	junction_2	1.29903810567666	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAGAGCCATTCTAAA	NA	False	NA	NA	False	NA	NA	NA	54824541	54854623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_54825143_54827757_54828109_54829478_54829619_54844422_54844607_54853349
tx.12744	chr9	+	1154	9	FSM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	12	-1	-3	1	multi-exon	FALSE	canonical	3	1650	junction_8	116.746252616519	909	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTGAAAGGATACTTT	NA	False	NA	NA	False	NA	NA	NA	54858085	54865315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
tx.12745	chr9	+	2079	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	33	0	-28	0	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	954	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	NA	False	NA	NA	NA	55116241	55131717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
tx.12746	chr9	+	1834	6	FSM	ENSMUSG00000032309.16	ENSMUST00000146201.8	2009	6	177	-2	177	0	multi-exon	FALSE	canonical	0	0	junction_1	392.751626349274	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	NA	False	NA	NA	NA	55116650	55131717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
tx.12747	chr9	-	1912	6	NIC	ENSMUSG00000032311.18	novel	2095	9	NA	NA	-13	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	7.75628777186613	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCAAACCAGTTCTTTA	234	False	NA	NA	False	NA	NA	NA	55149758	55131511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_55132877_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55149663
tx.12748	chr9	-	1336	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	61	-5	61	5	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	658	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCAGAAACATGCCTAGC	NA	False	NA	NA	False	NA	NA	NA	55419466	55361786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
tx.12749	chr9	-	2556	15	ISM	ENSMUSG00000034007.11	ENSMUST00000037408.9	5158	31	110420	366	-16875	-366	3prime_fragment	FALSE	canonical	3	52	junction_4	8.18410604994429	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTATCAAGTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	55716469	55457532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385
tx.1275	chr10	-	1578	13	ISM	ENSMUSG00000052798.14	ENSMUST00000218576.2	3092	28	22271	0	-9036	0	3prime_fragment	FALSE	canonical	3	787	junction_11	72.2689805902612	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	NA	False	NA	NA	NA	117606298	117586525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280
tx.12750	chr9	+	1243	3	NNC	ENSMUSG00000111662.2	novel	486	2	NA	NA	-16	-8240	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGATGTATTCTACTT	NA	False	NA	NA	False	NA	NA	NA	55845519	55849047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_55845849_55847480_55847621_55848273
tx.12751	chr9	+	2008	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	13	3	0	-3	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACGTGCACCTGAGACA	973	False	NA	NA	False	NA	NA	NA	55949153	55966358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
tx.12752	chr9	-	1446	6	ISM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	13491	0	12976	0	3prime_fragment	FALSE	canonical	3	718	junction_1	25.9028955910338	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	False	NA	NA	False	NA	NA	NA	56054850	56043167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670
tx.12753	chr9	-	1644	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	72	0	-65	0	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	False	NA	NA	False	NA	NA	NA	56068269	56043167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
tx.12754	chr9	+	1902	8	FSM	ENSMUSG00000032329.5	ENSMUST00000217518.2	2468	8	6	560	0	-560	multi-exon	FALSE	canonical	3	179	junction_3	24.8160580006954	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAGTGTCATGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	56326113	56397005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897
tx.12755	chr9	+	1999	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	171	-470	0	470	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGGTAGATGGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	56326098	56398079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
tx.12756	chr9	+	1361	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	30	0	30	0	multi-exon	TRUE	canonical	3	166	junction_1	20.9105236663265	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	False	NA	NA	False	NA	NA	NA	56858191	56890490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
tx.12757	chr9	+	1087	7	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	12183	0	12183	0	3prime_fragment	FALSE	canonical	3	194	junction_4	17.4395782313934	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	5233	False	NA	NA	False	NA	NA	NA	56870344	56890490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
tx.12758	chr9	+	1075	2	NNC	ENSMUSG00000042557.15	novel	5086	21	NA	NA	-11	-211	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	56983648	57035437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_56983760_57034473
tx.12759	chr9	+	3253	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	58	509	-20	0	multi-exon	FALSE	canonical	2	160	junction_17	33.744593641056	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGCTGTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	57038031	57049497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
tx.1276	chr10	-	3111	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	3	0	3	0	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	NA	False	NA	NA	NA	117628607	117586525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
tx.12760	chr9	-	1721	10	FSM	ENSMUSG00000032298.14	ENSMUST00000190245.7	1693	10	-16	-12	-16	12	multi-exon	FALSE	canonical	3	40	junction_9	6.09391520035648	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGCAGGCTACCTA	NA	False	NA	NA	False	NA	NA	NA	57055427	57050071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
tx.12761	chr9	-	801	7	FSM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	1138	2	0	0	multi-exon	FALSE	canonical	3	898	junction_5	106.241470245851	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTCTTGCTTGCTT	7469	False	NA	NA	False	NA	NA	NA	57064423	57062320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350
tx.12762	chr9	-	834	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	24	0	9	0	multi-exon	FALSE	canonical	3	701	junction_7	157.218553197095	344	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6301	False	NA	NA	False	NA	NA	NA	57065591	57062322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
tx.12763	chr9	-	1377	2	FSM	ENSMUSG00000032300.8	ENSMUST00000214583.2	625	2	7	-759	5	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	57169875	57160399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57161613_57169711
tx.12764	chr9	-	1946	7	FSM	ENSMUSG00000063849.7	ENSMUST00000085709.6	2744	7	-15	813	3	495	multi-exon	FALSE	canonical	3	27	junction_2	42.49607825043	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTCAGTGTGTAAAGG	NA	False	NA	NA	False	NA	NA	NA	57347394	57320748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
tx.12765	chr9	-	1665	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	57347390	57321243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
tx.12766	chr9	-	3204	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	21	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	NA	False	NA	NA	NA	57375320	57348609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
tx.12767	chr9	-	3050	6	FSM	ENSMUSG00000040722.8	ENSMUST00000215734.2	675	6	-3	-2372	-3	0	multi-exon	FALSE	canonical	3	101	junction_3	25.4715527598927	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	NA	False	NA	NA	NA	57375323	57348609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
tx.12768	chr9	-	553	2	Antisense	novelGene_ENSMUSG00000062309.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGACTCAAGCCTGGTCC	9620	False	NA	NA	False	NA	NA	NA	57411759	57411061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr9_-_57411351_57411495
tx.12769	chr9	+	1332	2	Genic_Genomic	ENSMUSG00000062309.9	novel	1423	1	NA	NA	21	0	multi-exon	FALSE	canonical	3	12	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCAGTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	57411329	57412731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr9_+_57411538_57411607
tx.1277	chr10	-	1928	7	ISM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	21359	593	-6136	-593	3prime_fragment	FALSE	canonical	3	789	junction_2	118.228239717365	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTGTTATTTTACACAG	NA	False	NA	NA	False	NA	NA	NA	117660581	117650368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498
tx.12770	chr9	+	685	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	-39	-1	-34	1	multi-exon	FALSE	canonical	3	7868	junction_4	746.021908190369	2796	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	338	False	NA	NA	False	NA	NA	NA	57428522	57439710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
tx.12771	chr9	-	1760	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	11	9	11	-9	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGAAGAGCAGTCAGC	8962	False	NA	NA	False	NA	NA	NA	57460035	57451547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
tx.12772	chr9	+	2339	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	1	0	1	0	multi-exon	TRUE	canonical	3	243	junction_4	15.3927742788621	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGCCCTGATGTCAAT	NA	False	NA	NA	False	NA	NA	NA	57468226	57496078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
tx.12773	chr9	-	1234	5	FSM	ENSMUSG00000032312.8	ENSMUST00000213660.2	652	5	90	-672	90	0	multi-exon	FALSE	canonical	3	119	junction_1	9.78199877325692	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	57535954	57533928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935
tx.12774	chr9	+	3031	6	FSM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	6	1240	-6	-1240	multi-exon	FALSE	canonical	3	26	junction_2	95.7613700820952	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	NA	False	NA	NA	False	NA	NA	NA	57615843	57657446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57651867_57652086_57655443
tx.12775	chr9	+	3350	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	22	2336	-5	-1240	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	NA	False	NA	NA	False	NA	NA	NA	57615844	57657446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
tx.12776	chr9	-	1666	12	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	91.1213884772205	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGTACCAGTGTGTC	9801	False	NA	NA	False	NA	NA	NA	57672410	57657991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
tx.12777	chr9	-	1765	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	739	-8	0	8	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTGTGTCCATCTCCA	9807	False	NA	NA	False	NA	NA	NA	57672404	57657983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
tx.12778	chr9	-	4046	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	57744069	57697635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
tx.12779	chr9	+	1364	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	59.3140792729686	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	57818268	57837251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
tx.1278	chr10	-	2012	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	115	597	115	-597	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATAGGTGTTATTTTAC	8720	False	NA	NA	False	NA	NA	NA	117681825	117650372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
tx.12780	chr9	+	1466	12	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	84.997131696865	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	57818275	57837251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_57818343_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
tx.12781	chr9	-	3334	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	113.743375875501	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGATTGCAATCTCTA	2204	False	NA	NA	False	NA	NA	NA	58157016	58125358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
tx.12782	chr9	+	1912	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	72	0	44	0	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	NA	False	NA	NA	NA	58160518	58169803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
tx.12783	chr9	+	748	2	NIC	ENSMUSG00000097651.3	novel	843	3	NA	NA	-20	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTGATACTTGCTGG	NA	False	NA	NA	False	NA	NA	NA	58362384	58376920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_58362640_58376427
tx.12784	chr9	+	856	3	FSM	ENSMUSG00000097651.3	ENSMUST00000181967.3	843	3	-16	3	-16	-3	multi-exon	FALSE	canonical	3	39	junction_1	1.5	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTGTGGCTGATACTT	NA	False	NA	NA	False	NA	NA	NA	58362388	58376915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_58362640_58374083_58374201_58376427
tx.12785	chr9	+	1981	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	43	0	-39	0	multi-exon	FALSE	canonical	3	310	junction_5	36.1815151813233	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	580	False	NA	NA	False	NA	NA	NA	58489617	58560161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
tx.12786	chr9	-	277	2	ISM	ENSMUSG00000074269.11	ENSMUST00000175792.8	516	3	1488	28	1488	0	3prime_fragment	FALSE	canonical	3	644	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCAATGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	58565087	58560160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_58560390_58565039
tx.12787	chr9	-	879	6	FSM	ENSMUSG00000074269.11	ENSMUST00000098674.6	883	6	-18	22	-18	0	multi-exon	FALSE	canonical	0	0	junction_3	244.73054570282	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCAATGTTTTATT	9032	False	NA	NA	False	NA	NA	NA	58648860	58560160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_58560390_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
tx.12788	chr9	-	899	2	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTATCAGTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	59182516	59181493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr9_-_59182170_59182293
tx.12789	chr9	-	2462	16	FSM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	56	0	-3	0	multi-exon	TRUE	canonical	3	108	junction_2	13.5581054068119	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATCACTGTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	59260735	59229272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
tx.1279	chr10	+	3095	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	-19	-2	2	2	multi-exon	FALSE	canonical	3	66	junction_4	15.3152281412244	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	117977717	118004904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
tx.12790	chr9	-	2673	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	504	3794	-27	1061	multi-exon	TRUE	canonical	3	295	junction_6	43.7741649239926	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGATTGTGAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	59393393	59299334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
tx.12791	chr9	+	1854	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	142	0	142	0	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	519	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	59446964	59472392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
tx.12792	chr9	+	2243	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	186	3	-19	-3	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	3765	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1850	False	NA	NA	False	NA	NA	NA	59563836	59586655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
tx.12793	chr9	-	1461	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	11	2210	0	1	multi-exon	FALSE	canonical	3	38	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGGTGTGTGGTGCAT	6429	False	NA	NA	False	NA	NA	NA	59657921	59643751	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_59645152_59657860
tx.12794	chr9	+	2390	4	ISM	ENSMUSG00000034485.11	ENSMUST00000214997.2	4493	7	7896	-7	4165	0	3prime_fragment	FALSE	canonical	3	182	junction_1	5.8878405775519	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGAGATGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	60777591	60787652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_60779566_60781314_60781468_60783643_60783710_60787455
tx.12795	chr9	+	1027	3	NNC	ENSMUSG00000111147.2	novel	3468	7	NA	NA	20146	210	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTTTATCTTATGTG	NA	False	NA	NA	False	NA	NA	NA	60959639	60966608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_60959709_60960349_60960452_60965752
tx.12796	chr9	-	497	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	3	-1	3	1	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	9640	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGACTGGTCTCACTTGT	NA	False	NA	NA	False	NA	NA	NA	61821821	61820564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_61820804_61821169_61821245_61821638
tx.12797	chr9	-	3089	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	37.7146464629211	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61854056	61824558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
tx.12798	chr9	-	1921	8	FSM	ENSMUSG00000032278.12	ENSMUST00000034817.11	3566	8	0	1645	0	663	multi-exon	FALSE	canonical	1	1	junction_5	2.96922995583236	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGCCTCTCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	61934138	61862664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_61863570_61868810_61868953_61871009_61871107_61876062_61876190_61879907_61880114_61883353_61883482_61896274_61896421_61933968
tx.12799	chr9	-	1979	3	FSM	ENSMUSG00000032252.15	ENSMUST00000185510.2	1922	3	-55	-2	-9	2	multi-exon	FALSE	canonical	3	22	junction_1	70	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATATGGTGTCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	62029946	61987599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_61989308_61995710_61995802_62029766
tx.128	chr1	+	3403	9	FSM	ENSMUSG00000043015.16	ENSMUST00000165859.8	3396	9	-7	0	-7	0	multi-exon	FALSE	canonical	3	30	junction_5	7.49061913328932	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	52669854	52691078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682280_52682396_52684419_52684646_52687908_52688086_52688864
tx.1280	chr10	+	2970	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	21.2053452380919	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	117977707	118004904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
tx.12800	chr9	+	1098	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	23	992	23	39	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	397	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTTCCCCCCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	62248633	62285102	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
tx.12801	chr9	+	307	2	ISM	ENSMUSG00000032249.15	ENSMUST00000145679.2	629	4	3885	-39	3885	39	3prime_fragment	FALSE	canonical	3	527	junction_1	0	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTTCCCCCCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	62284605	62285102	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_62284646_62284835
tx.12802	chr9	+	803	3	ISM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	10542	3	10512	-3	3prime_fragment	FALSE	canonical	3	41	junction_1	28	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGGAATTGGTGTTTC	2993	False	NA	NA	False	NA	NA	NA	62775927	62783200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_62776100_62778547_62778737_62782758
tx.12803	chr9	+	736	2	ISM	ENSMUSG00000032246.15	ENSMUST00000163820.3	699	4	13040	-4	13027	-3	3prime_fragment	FALSE	canonical	3	97	junction_1	0	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGGAATTGGTGTTTC	5508	False	NA	NA	False	NA	NA	NA	62778442	62783200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_62778737_62782758
tx.12804	chr9	-	2219	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-4	3349	0	1163	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAAAACAAGCAC	NA	False	NA	NA	False	NA	NA	NA	62888165	62788998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
tx.12805	chr9	-	2088	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	222	0	197	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	63284962	63071049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
tx.12806	chr9	+	2593	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	7	2694	7	1566	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTAATGTGTTTTGTT	9221	False	NA	NA	False	NA	NA	NA	63509948	63549176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
tx.12807	chr9	+	2599	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	1	1569	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	67.8911619914051	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	9215	False	NA	NA	False	NA	NA	NA	63509942	63549179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874_63546925_63547488
tx.12808	chr9	+	2022	5	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	32649	2694	-3344	1566	3prime_fragment	FALSE	canonical	3	211	junction_1	58.9194365214061	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTAATGTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	63542590	63549176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
tx.12809	chr9	-	1706	9	ISM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	19502	0	1900	0	3prime_fragment	FALSE	canonical	3	728	junction_4	160.832162128723	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	NA	False	NA	NA	NA	64060884	64044425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832
tx.1281	chr10	+	2852	12	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	32.0750669111597	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	117977710	118004904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_117977868_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
tx.12810	chr9	-	2766	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	191	0	0	0	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	NA	False	NA	NA	NA	64080195	64044425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
tx.12811	chr9	+	1392	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	-1	147	-1	-147	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	13182	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	64080655	64085801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
tx.12812	chr9	+	741	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	27	460	27	-460	multi-exon	FALSE	canonical	3	413	junction_2	26	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCTGCTACAATATA	1655	False	NA	NA	False	NA	NA	NA	64086582	64089954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_64086703_64087780_64087871_64089423
tx.12813	chr9	-	2414	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	8	14	8	-14	multi-exon	TRUE	canonical	3	469	junction_6	51.6454257412987	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACAAGAGATTTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	64160905	64093065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
tx.12814	chr9	+	1209	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	342	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9568	False	NA	NA	False	NA	NA	NA	64188887	64212076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
tx.12815	chr9	+	1203	8	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	479	junction_1	696.204344855674	204	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9568	False	NA	NA	False	NA	NA	NA	64188887	64212076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
tx.12816	chr9	-	3221	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	101	253	0	2	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTACTTTTTTTTCTT	5188	False	NA	NA	False	NA	NA	NA	64248438	64214290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
tx.12817	chr9	-	1213	4	FSM	ENSMUSG00000004771.13	ENSMUST00000171100.2	508	4	-34	-671	-6	271	multi-exon	TRUE	canonical	3	7	junction_3	456.48244459368	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCATAGGGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	64645046	64623513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64644865
tx.12818	chr9	-	1029	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	2	1305	2	1	multi-exon	FALSE	canonical	3	899	junction_3	39.0160223497988	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGTTTACTCTTCATC	NA	False	NA	NA	False	NA	NA	NA	64645038	64623885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
tx.12819	chr9	+	2535	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-39	324	-39	-54	multi-exon	TRUE	canonical	3	115	junction_1	33.6860505254029	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGGTGTTTTGATCTAT	NA	False	NA	NA	False	NA	NA	NA	64868147	64893936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
tx.1282	chr10	-	1080	5	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	30006	3390	-1840	-3390	3prime_fragment	FALSE	canonical	3	758	junction_4	26.7441582406327	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGATTTCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	119045954	119038549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878
tx.12820	chr9	+	1247	5	ISM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	17213	54	16461	-54	3prime_fragment	FALSE	canonical	3	229	junction_3	10.0623058987491	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGGTGTTTTGATCTAT	NA	False	NA	NA	False	NA	NA	NA	64885431	64893936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
tx.12821	chr9	-	2709	11	FSM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	24.7620677650313	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTGTGCTTAAACATCA	NA	False	NA	NA	False	NA	NA	NA	64928975	64894264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
tx.12822	chr9	+	2506	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	-22	-2	-22	2	multi-exon	FALSE	canonical	3	27	junction_1	17.0269394392142	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGTCTGTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	65121949	65146502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
tx.12823	chr9	+	2564	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	-50	4	-50	2	multi-exon	FALSE	canonical	3	51	junction_2	11.7915223783869	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGTCTGTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	65122376	65146502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
tx.12824	chr9	+	2469	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	19	397	-16	-397	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGATCCCATTGTTT	6170	False	NA	NA	False	NA	NA	NA	65201560	65237542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
tx.12825	chr9	+	2439	13	FSM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	-28	398	7	-397	multi-exon	FALSE	canonical	3	55	junction_5	89.4905333292609	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGATCCCATTGTTT	6158	False	NA	NA	False	NA	NA	NA	65201548	65237542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
tx.12826	chr9	+	1145	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-143	-156	-143	156	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	557	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGTGTAGTGACACATG	NA	False	NA	NA	False	NA	NA	NA	65278984	65285487	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
tx.12827	chr9	+	1074	2	ISM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-14	14590	-8	-9450	5prime_fragment	FALSE	canonical	3	184	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTCACCTCCTAGAGG	NA	False	NA	NA	False	NA	NA	NA	65343055	65345109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_65343290_65344269
tx.12828	chr9	+	1405	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	637	0	0	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTTGTATCCTTTGAAG	NA	False	NA	NA	False	NA	NA	NA	65343063	65359699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
tx.12829	chr9	+	1660	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	6	1014	0	-1014	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	140	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	7182	False	NA	NA	False	NA	NA	NA	65368234	65394738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
tx.1283	chr10	-	810	2	ISM	ENSMUSG00000020228.12	ENSMUST00000154501.2	3095	12	-80	25910	42	-25910	5prime_fragment	FALSE	canonical	3	65	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACATGGTAGACCAGGC	NA	False	NA	NA	False	NA	NA	NA	119948850	119946584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_119947134_119948589
tx.12830	chr9	+	1498	3	ISM	ENSMUSG00000041064.15	ENSMUST00000131483.3	3309	13	6260	3	6255	0	3prime_fragment	FALSE	canonical	3	136	junction_1	12	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	65500762	65503246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_65500885_65501668_65501861_65502062
tx.12831	chr9	+	1982	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	5	0	5	0	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	540	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	65537845	65567808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
tx.12832	chr9	+	1811	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	365	junction_4	22.3983816379666	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGTCTGTCTTTTTAT	4635	False	NA	NA	False	NA	NA	NA	65583860	65597580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
tx.12833	chr9	-	3289	12	FSM	ENSMUSG00000032386.16	ENSMUST00000122410.8	3915	12	6	620	6	3	multi-exon	TRUE	canonical	3	24	junction_1	56.3782972135042	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGGAAGTTCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	65792331	65739037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_65740731_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
tx.12834	chr9	-	3391	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	0	-1392	0	-5	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAGGGGTTGGAAGT	NA	False	NA	NA	False	NA	NA	NA	65792338	65739045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
tx.12835	chr9	-	1597	8	ISM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	0	24691	0	-18837	5prime_fragment	FALSE	canonical	3	185	junction_2	15.7480157480236	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAGCCAGGTG	NA	False	NA	NA	False	NA	NA	NA	65792338	65765128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
tx.12836	chr9	+	965	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	79	1144	-4	-1144	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	485	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATCTCTTGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	65797597	65809404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
tx.12837	chr9	+	909	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	-16	-1	-7	1	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	1628	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTGGGCTGTGTT	1558	False	NA	NA	False	NA	NA	NA	65967496	65973906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
tx.12838	chr9	-	1979	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	89	5	0	-5	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACAGGACTGGGCATGG	NA	False	NA	NA	False	NA	NA	NA	66032079	65995419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
tx.12839	chr9	+	1164	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	78	-2	78	2	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	376	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCACCTTAGGTTTTTA	1461	False	NA	NA	False	NA	NA	NA	66033970	66046239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
tx.1284	chr10	+	878	7	FSM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	23	3	-7	-3	multi-exon	FALSE	canonical	3	514	junction_6	43.3628104870214	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTGTGTTCTTCTATA	NA	False	NA	NA	False	NA	NA	NA	120044677	120060819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
tx.12840	chr9	-	2253	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	133	3221	-3	19	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGTCTCTGGTCTTC	NA	False	NA	NA	False	NA	NA	NA	66500291	66425139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
tx.12841	chr9	-	1280	6	FSM	ENSMUSG00000032375.16	ENSMUST00000034934.15	4910	6	-7	3637	-7	354	multi-exon	FALSE	canonical	1	1	junction_5	4.70744091837593	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGTAGCCCCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	66702779	66686120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_66686663_66691799_66691928_66696927_66697051_66697879_66697951_66701351_66701523_66702534
tx.12842	chr9	-	1266	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	13	3926	13	364	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGTAGCCCTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	66741995	66726201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
tx.12843	chr9	+	492	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	11	-4	6	0	multi-exon	FALSE	canonical	3	10808	junction_3	618.277355956765	3827	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTCCCTCTGCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	66853378	66856798	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
tx.12844	chr9	-	1723	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	-114	-2	-9	0	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	NA	False	NA	NA	NA	66951198	66929871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.12845	chr9	-	1723	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	-9	0	-9	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	NA	False	NA	NA	NA	66951198	66929871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.12846	chr9	-	1125	9	NIC	ENSMUSG00000032366.16	novel	1208	10	NA	NA	10	-8	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	203.579683416592	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	66951179	66935255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.12847	chr9	-	2651	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	-20	-8	intron_retention	FALSE	canonical	3	256	junction_1	130.784134343269	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	66951209	66935255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
tx.12848	chr9	+	2370	7	ISM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	17821	48	-988	-48	3prime_fragment	FALSE	canonical	3	116	junction_5	12.1060131982233	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTGTCATTTCA	8215	False	NA	NA	False	NA	NA	NA	69323008	69340356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
tx.12849	chr9	+	1610	6	ISM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	19153	48	186	-48	3prime_fragment	FALSE	canonical	3	116	junction_4	13.2574507353412	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTGTCATTTCA	9547	False	NA	NA	False	NA	NA	NA	69324340	69340356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
tx.1285	chr10	+	751	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	-4	917	-4	101	multi-exon	FALSE	canonical	3	990	junction_2	137	627	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATGCTGAAGTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	120062970	120067570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_120063029_120063878_120064109_120067107
tx.12850	chr9	+	1388	13	FSM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	56	3	-40	-3	multi-exon	FALSE	canonical	3	66	junction_7	12.0908022893437	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCGTTGCCTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	69360957	69399074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
tx.12851	chr9	+	2360	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	-30	-2	8	2	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTCTTAATTACCTTC	NA	False	NA	NA	False	NA	NA	NA	69896755	69915539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
tx.12852	chr9	+	754	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	11	128	-4	0	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	308	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	NA	False	NA	NA	NA	69919842	69930020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
tx.12853	chr9	-	1597	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	174	1932	174	-1932	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATGGTGATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	70048686	69997724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
tx.12854	chr9	-	1544	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	-9	-4	-9	4	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	462	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATCCTGTGTATATTTGT	NA	False	NA	NA	False	NA	NA	NA	70328838	70314969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
tx.12855	chr9	+	805	6	ISM	ENSMUSG00000032212.11	ENSMUST00000217593.2	3319	20	-87	19786	-1	-7186	5prime_fragment	FALSE	canonical	3	203	junction_1	16.4365446490435	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAATAGTTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	70450074	70479547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430
tx.12856	chr9	+	3752	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	-56	-5	20	3	multi-exon	FALSE	canonical	3	132	junction_6	54.986612006924	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	NA	False	NA	NA	NA	70450095	70499519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
tx.12857	chr9	+	1569	6	ISM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	41881	-2	3286	0	3prime_fragment	FALSE	canonical	3	252	junction_2	38.3176199678425	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTAATGTATTGAGAAC	NA	False	NA	NA	False	NA	NA	NA	70492032	70499516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
tx.12858	chr9	+	1605	10	ISM	ENSMUSG00000054693.15	ENSMUST00000140205.8	2720	16	-51	16633	-51	13635	5prime_fragment	FALSE	canonical	3	236	junction_5	18.1747348716376	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAACTGTTTTGTTGGTA	4899	False	NA	NA	False	NA	NA	NA	70586227	70669031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864
tx.12859	chr9	-	1069	5	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	118030	41	117835	3	3prime_fragment	FALSE	canonical	3	43	junction_2	8.95823643358446	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGGTGTGCTTTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	70724060	70705450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811
tx.1286	chr10	-	847	5	FSM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	164	2699	-13	-2699	multi-exon	FALSE	canonical	1	2	junction_1	7.32717544487642	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTTTTTCCTTAACT	NA	False	NA	NA	False	NA	NA	NA	120312210	120199878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311857
tx.12860	chr9	+	2233	14	FSM	ENSMUSG00000013584.6	ENSMUST00000034723.6	2264	14	24	7	24	-7	multi-exon	FALSE	canonical	2	4	junction_1	2.4973358585766	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGGGACTGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	71123094	71203518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_71123246_71159879_71159985_71160197_71160339_71162315_71162446_71169012_71169075_71171068_71171198_71171314_71171429_71188885_71188989_71190659_71190845_71192135_71192301_71192397_71192556_71193201_71193277_71200887_71200977_71202892
tx.12861	chr9	-	1554	3	ISM	ENSMUSG00000032199.14	ENSMUST00000163972.2	2138	4	1521	-8	1521	8	3prime_fragment	FALSE	canonical	3	2231	junction_1	121	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCATGGCGATGTGTTC	4968	False	NA	NA	False	NA	NA	NA	71390719	71385744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_71386823_71388623_71388829_71390448
tx.12862	chr9	-	2742	4	FSM	ENSMUSG00000032199.14	ENSMUST00000163972.2	2138	4	-601	-3	346	3	multi-exon	FALSE	canonical	3	31	junction_3	1098.58130736368	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCGAGCTCATGGCGATG	2846	False	NA	NA	False	NA	NA	NA	71392841	71385749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392016
tx.12863	chr9	+	4407	22	FSM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	-18	-2	1	2	multi-exon	FALSE	canonical	3	36	junction_20	11.1161666503221	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGGCTAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	72182142	72271061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
tx.12864	chr9	+	1777	10	FSM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	26	3447	26	-3447	multi-exon	FALSE	canonical	3	40	junction_2	21.6834692682276	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATTAGTCATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	72345842	72365860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
tx.12865	chr9	+	885	3	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	13817	3441	13817	-3441	3prime_fragment	FALSE	canonical	3	85	junction_1	11.5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCATTTTTATTTACTA	1857	False	NA	NA	False	NA	NA	NA	72359633	72365866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_72360121_72364059_72364186_72365594
tx.12866	chr9	-	1141	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	3	37	junction_2	56.7235400869868	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGTGAAATAAACAGAAT	7873	False	NA	NA	False	NA	NA	NA	72399246	72368382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_72368561_72369137_72369273_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
tx.12867	chr9	-	1279	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	134	1381	-6	2	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGTGAAATAAACAGAAT	7870	False	NA	NA	False	NA	NA	NA	72399249	72368382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
tx.12868	chr9	+	1427	7	FSM	ENSMUSG00000037674.16	ENSMUST00000184015.2	1554	7	6	121	6	-58	multi-exon	FALSE	canonical	3	175	junction_3	16.2933183305987	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTAGGCTCCTGTCCCA	1178	False	NA	NA	False	NA	NA	NA	72440022	72519647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
tx.12869	chr9	-	1160	3	NNC	ENSMUSG00000098294.2	novel	527	2	NA	NA	-2901	484	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGGTAGTTTGGGTTT	4637	False	NA	NA	False	NA	NA	NA	72686408	72680860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_72681693_72683328_72683532_72686283
tx.1287	chr10	-	564	4	ISM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	168	13349	-9	-13349	5prime_fragment	FALSE	canonical	1	6	junction_1	6.12825877028341	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAGCAAAATACATATGG	NA	False	NA	NA	False	NA	NA	NA	120312206	120210528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_120210606_120298568_120298620_120309156_120309244_120311857
tx.12870	chr9	+	1943	9	FSM	ENSMUSG00000092192.8	ENSMUST00000034734.9	1975	9	45	-13	45	13	multi-exon	FALSE	canonical	3	12	junction_2	4.44233891097922	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTATTTTTTTAAGAGATT	9223	False	NA	NA	False	NA	NA	NA	72866111	72880359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_72866280_72867863_72868012_72868539_72868674_72869196_72869423_72871372_72871519_72872450_72872561_72876313_72876468_72879254_72879361_72879608
tx.12871	chr9	-	694	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	17	0	17	0	multi-exon	FALSE	canonical	3	81	junction_1	0	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTGTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	72892641	72887003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_72887479_72892422
tx.12872	chr9	+	2966	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-27	0	-27	0	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGCTTTCTGATGTC	NA	False	NA	NA	False	NA	NA	NA	72892832	72921220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
tx.12873	chr9	-	1499	10	NNC	ENSMUSG00000079469.11	novel	664	6	NA	NA	19	-2238	at_least_one_novel_splicesite	FALSE	non_canonical	3	21	junction_1	14.7103725897203	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGTGGTGTAATCCTT	NA	False	NA	NA	False	NA	NA	NA	72946962	72927130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_72927451_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
tx.12874	chr9	+	491	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	5	0	5	0	multi-exon	FALSE	canonical	3	439	junction_1	0	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTTATTTATAAAGGT	NA	False	NA	NA	False	NA	NA	NA	72947004	72950061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_72947148_72949713
tx.12875	chr9	+	1185	4	FSM	ENSMUSG00000092622.9	ENSMUST00000173734.9	1228	4	48	-5	48	5	multi-exon	FALSE	canonical	3	51	junction_3	87.8116671569837	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTATTTGAATGGA	NA	False	NA	NA	False	NA	NA	NA	73009727	73011725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_73009958_73010111_73010292_73010497_73011172_73011624
tx.12876	chr9	+	1633	3	FSM	ENSMUSG00000092622.9	ENSMUST00000034737.13	1681	3	52	-4	52	4	multi-exon	FALSE	canonical	3	216	junction_2	18.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGTGTATTTGAATGG	NA	False	NA	NA	False	NA	NA	NA	73009731	73011724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_73009958_73010111_73010292_73010497
tx.12877	chr9	+	1538	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	5	0	5	0	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	8585	False	NA	NA	False	NA	NA	NA	73020734	73030615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
tx.12878	chr9	+	410	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	63	3471	0	1	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	265	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	74944958	74964105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
tx.12879	chr9	+	369	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	187	3490	-12	1	multi-exon	FALSE	canonical	3	5814	junction_2	96	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	-50	True	NA	NA	NA	74945186	74964105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_74945244_74959514_74959638_74963916
tx.1288	chr10	+	1451	10	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_7	31.3970982381776	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCTTCAAATGATTGG	NA	False	NA	NA	False	NA	NA	NA	120359230	120374524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120373440_120373621_120373690_120373794_120374077
tx.12880	chr9	+	314	2	FSM	ENSMUSG00000007656.14	ENSMUST00000166549.2	1747	2	180	1253	180	1	multi-exon	FALSE	canonical	3	5814	junction_1	0	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	5944	False	NA	NA	False	NA	NA	NA	74959512	74964105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_74959638_74963916
tx.12881	chr9	+	1634	10	ISM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	0	47035	0	50	5prime_fragment	FALSE	canonical	3	35	junction_4	9.15302014516399	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGGACTAGGGAGATT	5128	False	NA	NA	False	NA	NA	NA	75139301	75165698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240
tx.12882	chr9	+	2101	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	11	-7	6	2	multi-exon	TRUE	canonical	3	15	junction_6	3.38230690505755	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTATCTTGTCTTTATTT	386	False	NA	NA	False	NA	NA	NA	75221428	75253160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
tx.12883	chr9	-	4209	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-19	-118	-19	116	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCCTGTTTGACTCTTT	NA	False	NA	NA	False	NA	NA	NA	75317306	75294067	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
tx.12884	chr9	+	2189	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	-9	0	3	0	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTATGCTTAAGAAAAC	917	False	NA	NA	False	NA	NA	NA	75348808	75373714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
tx.12885	chr9	+	1971	11	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	3808	0	-3736	0	3prime_fragment	FALSE	canonical	3	353	junction_1	46.3784432683979	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTATGCTTAAGAAAAC	4734	False	NA	NA	False	NA	NA	NA	75352625	75373714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
tx.12886	chr9	+	2577	4	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-164	-3	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	3.2659863237109	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTATGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	75375733	75393960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_75375966_75388729_75388947_75390380_75390480_75391931
tx.12887	chr9	-	3261	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-3	409	-3	-409	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	NA	False	NA	NA	NA	75466942	75405397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
tx.12888	chr9	-	1741	10	FSM	ENSMUSG00000032186.16	ENSMUST00000098552.10	9871	10	162	7968	-1	0	multi-exon	TRUE	canonical	3	14	junction_9	3.42467444609388	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTCTCTACATGCACAT	NA	False	NA	NA	False	NA	NA	NA	75518423	75480870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
tx.12889	chr9	-	2044	12	FSM	ENSMUSG00000032181.8	ENSMUST00000213324.2	2152	12	100	8	60	-8	multi-exon	TRUE	canonical	0	0	junction_7	1.99171839092788	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGACGCTCTGAGAAAC	7935	False	NA	NA	False	NA	NA	NA	75591197	75550654	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570489_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590219_75590273_75590916
tx.12890	chr9	+	633	3	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-7119	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	3	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCAGACTTGACAGTGA	NA	False	NA	NA	False	NA	NA	NA	76219739	76228128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_76219851_76226917_76227020_76227708
tx.12892	chr9	+	2762	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	17	3	17	-3	multi-exon	FALSE	canonical	3	515	junction_6	44.3764048354804	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	77824662	77891798	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
tx.12893	chr9	-	1260	7	NNC	ENSMUSG00000001366.15	novel	2155	13	NA	NA	-3155	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	19.2563120964414	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGATGGCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	77998073	77988780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_77997955
tx.12894	chr9	-	1221	7	ISM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	13433	0	-7587	0	3prime_fragment	FALSE	canonical	3	42	junction_6	7.6303487615064	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGATGGCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	78002505	77988780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426
tx.12895	chr9	+	2422	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-27	4165	4	4	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTCATTATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	78020569	78075224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
tx.12896	chr9	+	910	7	FSM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	67	0	67	0	multi-exon	FALSE	canonical	3	2717	junction_1	326.320735201155	3063	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	78099295	78116631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
tx.12897	chr9	-	976	7	NIC	ENSMUSG00000057933.11	novel	870	7	NA	NA	-3910	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	12.0369800568452	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	78249944	78238299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78249768
tx.12898	chr9	-	860	7	FSM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	8	2	8	-2	multi-exon	FALSE	canonical	3	15	junction_6	11.4260910006684	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCTCCTCATAAGTTC	NA	False	NA	NA	False	NA	NA	NA	78254432	78238301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78254370
tx.12899	chr9	-	600	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	19	0	19	0	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	54320	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	NA	NA	NA	78275440	78274333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_78274577_78275002_78275186_78275266
tx.129	chr1	+	3349	9	FSM	ENSMUSG00000043015.16	ENSMUST00000185483.7	2023	9	-43	-1283	1	0	multi-exon	FALSE	canonical	3	20	junction_5	9.4794184948234	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	52669862	52691078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682326_52682396_52684419_52684646_52687908_52688086_52688864
tx.1290	chr10	-	2996	21	FSM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	28	0	-18	0	multi-exon	FALSE	canonical	3	107	junction_12	17.7	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	3906	False	NA	NA	False	NA	NA	NA	121422664	121382359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
tx.12900	chr9	+	2371	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	-8	3	-8	-3	multi-exon	FALSE	canonical	3	57	junction_9	10.2457409010559	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGTTAGGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	78355481	78381431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
tx.12901	chr9	-	1737	8	FSM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	53	4	53	-4	multi-exon	FALSE	canonical	3	9075	junction_7	2138.51814038008	16028	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	NA	False	NA	NA	NA	78388953	78385734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
tx.12902	chr9	-	1900	11	FSM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	14	1322	0	-1304	multi-exon	FALSE	canonical	3	37	junction_3	5.61782876207526	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGAGGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	78495309	78445091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792_78485990_78495155
tx.12903	chr9	-	476	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	138	45	-30	0	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	1107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	79667022	79662687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
tx.12904	chr9	-	3565	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	91	2	91	-2	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCGTGCTGTTTATGTG	NA	False	NA	NA	False	NA	NA	NA	79700621	79676226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
tx.12905	chr9	+	2067	5	FSM	ENSMUSG00000043289.13	ENSMUST00000057067.10	2670	5	39	564	0	4	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGTTGAATTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	81745761	81908515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
tx.12906	chr9	+	1070	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	473	615	207	52	multi-exon	TRUE	canonical	3	114	junction_3	13.589211407093	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTCATACTGAATTTTTAC	NA	False	NA	NA	False	NA	NA	NA	82712065	82729125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
tx.12907	chr9	-	2951	23	ISM	ENSMUSG00000032253.14	ENSMUST00000188868.7	3317	25	-87	6613	21	12	5prime_fragment	FALSE	canonical	3	34	junction_11	7.22484235865655	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCCAAAGAAAGAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	82857548	82782696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
tx.12908	chr9	-	864	6	FSM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	4	-6	4	6	multi-exon	FALSE	canonical	3	36	junction_1	6.24179461373089	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTGTTTGTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	83028654	82991994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
tx.12909	chr9	-	1479	5	FSM	ENSMUSG00000066456.15	ENSMUST00000185315.7	1391	5	-82	-6	-7	6	multi-exon	FALSE	canonical	3	40	junction_3	4.7169905660283	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTGTTTGTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	83028665	82991994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
tx.1291	chr10	-	3125	5	ISM	ENSMUSG00000034667.9	ENSMUST00000039810.8	5992	25	25418	0	-85	0	3prime_fragment	FALSE	canonical	3	1275	junction_2	66.4398223959095	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	2250	False	NA	NA	False	NA	NA	NA	121436803	121423284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696
tx.12910	chr9	-	896	6	FSM	ENSMUSG00000066456.15	ENSMUST00000162246.9	983	6	91	-4	11	4	multi-exon	FALSE	canonical	3	19	junction_1	12.1556571192182	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCACCTGTTTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	83028647	82991996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_82992483_82993045_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
tx.12911	chr9	+	3317	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-40	1288	-39	-1288	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGGCTTTTTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	83430340	83482111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
tx.12912	chr9	+	2890	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	-19	0	9	0	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACAGTGGTCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	83716751	83754439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
tx.12913	chr9	+	2131	17	ISM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	8994	-5	8946	2	3prime_fragment	FALSE	canonical	3	211	junction_5	29.4544139306828	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGTCAGTTTCTTCAAT	NA	False	NA	NA	False	NA	NA	NA	83725764	83754444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
tx.12914	chr9	+	1477	11	FSM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	1	-1	1	0	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTGTGTGTGTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	83807198	84006293	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
tx.12915	chr9	-	1769	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	19	2	19	-2	multi-exon	TRUE	canonical	3	19	junction_5	4.12160822022031	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTTCTTTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	86346984	86189360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
tx.12917	chr9	-	2048	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	-6	624	-5	0	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	False	NA	NA	False	NA	NA	NA	86453886	86437053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
tx.12918	chr9	+	1271	3	FSM	ENSMUSG00000032417.11	ENSMUST00000179212.3	1130	3	-82	-59	-20	0	multi-exon	FALSE	canonical	1	1	junction_1	25.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTGTCTCAAGTCCAA	NA	False	NA	NA	False	NA	NA	NA	86454023	86456952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_86454142_86454889_86455117_86456026
tx.12919	chr9	+	1232	3	FSM	ENSMUSG00000032417.11	ENSMUST00000185566.7	1054	3	-12	-166	-12	0	multi-exon	FALSE	canonical	3	38	junction_1	7	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTGTCTCAAGTCCAA	NA	False	NA	NA	False	NA	NA	NA	86454031	86456952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_86454111_86454889_86455117_86456026
tx.12920	chr9	-	1760	3	NNC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	31087	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_2	172.5	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTAAATGTCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	86469670	86463423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_86464961_86469015_86469115_86469546
tx.12921	chr9	-	3113	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	172	3	172	-3	multi-exon	TRUE	canonical	3	250	junction_5	30.9913139195733	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACCGTAAATGTCATTT	9782	False	NA	NA	False	NA	NA	NA	86577834	86463426	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
tx.12922	chr9	-	2172	6	ISM	ENSMUSG00000032418.16	ENSMUST00000189968.7	1055	8	6736	-1312	6736	-3	3prime_fragment	FALSE	canonical	3	250	junction_5	41.7708032003216	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACCGTAAATGTCATTT	NA	False	NA	NA	False	NA	NA	NA	86494021	86463426	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905
tx.12924	chr9	+	2217	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	34	393	34	0	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	NA	False	NA	NA	NA	86904100	86959434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
tx.12925	chr9	-	3094	28	FSM	ENSMUSG00000032422.19	ENSMUST00000165315.9	3109	28	14	1	-8	-1	multi-exon	TRUE	canonical	3	141	junction_13	28.9754164757839	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTGTATTTACTGTC	NA	False	NA	NA	False	NA	NA	NA	88320990	88258803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
tx.12926	chr9	-	2007	2	ISM	ENSMUSG00000032423.13	ENSMUST00000174688.8	3176	9	24248	7	24227	-7	3prime_fragment	FALSE	canonical	3	723	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTATGTCAGTTACTGG	NA	False	NA	NA	False	NA	NA	NA	88338570	88334496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_88336349_88338415
tx.12927	chr9	-	3417	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	353	5680	-10	0	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGGCGAGTGTAACTT	NA	False	NA	NA	False	NA	NA	NA	88364259	88334741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
tx.12928	chr9	-	1004	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	672	2	0	0	multi-exon	FALSE	canonical	3	405	junction_2	300.420122495148	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	88404943	88403104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536
tx.12929	chr9	+	1197	6	FSM	ENSMUSG00000032425.16	ENSMUST00000162827.8	3472	6	69	2206	4	672	multi-exon	FALSE	canonical	3	7	junction_1	5.88557558782486	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTATTGTAGAGCGATA	NA	False	NA	NA	False	NA	NA	NA	88430141	88450908	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_88430562_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
tx.1293	chr10	-	1401	3	Antisense	novelGene_ENSMUSG00000047642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	4716	False	NA	NA	False	NA	NA	NA	121493429	121490296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_-_121490799_121492206_121493021_121493344
tx.12930	chr9	-	798	4	FSM	ENSMUSG00000079427.11	ENSMUST00000186863.7	725	4	14	-87	-3	1	multi-exon	TRUE	canonical	3	43	junction_3	219.136182924378	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	88601626	88570657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_88571039_88597540_88597803_88598546_88598617_88601541
tx.12931	chr9	-	734	3	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	156	junction_2	185.5	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	88601632	88570657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_88571039_88597540_88597803_88601541
tx.12932	chr9	-	849	4	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	19	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	226.851395313222	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	88601847	88570657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_88571039_88597540_88597803_88598546_88598617_88601711
tx.12933	chr9	-	785	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	13	3	13	1	multi-exon	FALSE	canonical	3	319	junction_2	104	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	88601853	88570657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_88571039_88597540_88597803_88601711
tx.12934	chr9	+	637	5	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	14.9059551857638	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGAGCCATTTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	88948970	88957926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr9_+_88949021_88949384_88949440_88949528_88949604_88957243_88957340_88957565
tx.12935	chr9	+	779	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	19	18	19	-4	multi-exon	TRUE	canonical	3	175	junction_1	109	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	89093228	89122275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_89093365_89097261_89097524_89121894
tx.12936	chr9	+	771	4	FSM	ENSMUSG00000066442.18	ENSMUST00000117314.8	705	4	12	-78	-5	2	multi-exon	FALSE	canonical	3	32	junction_1	167.420296127905	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATAAAAATAAAATAATAT	NA	False	NA	NA	False	NA	NA	NA	89093447	89122246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_89093535_89096464_89096535_89097261_89097524_89121894
tx.12937	chr9	+	730	3	NIC	ENSMUSG00000066442.18	novel	1406	4	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	155	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	89093447	89122275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_89093535_89097261_89097524_89121894
tx.12938	chr9	-	1318	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	30	-2	30	2	multi-exon	FALSE	canonical	3	96	junction_1	7.5	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAGTGATGTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	89587091	89581256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_89582033_89584824_89585074_89586798
tx.12939	chr9	+	1387	12	FSM	ENSMUSG00000032359.15	ENSMUST00000034915.15	1617	12	228	2	-11	0	multi-exon	FALSE	canonical	2	5	junction_2	3.46648653907957	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGGCGTAGGTCTCTA	NA	False	NA	NA	False	NA	NA	NA	89936547	89958140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_89936688_89942531_89942564_89943571_89943678_89944769_89944841_89946205_89946311_89946559_89946647_89947444_89947501_89949079_89949162_89950457_89950527_89953871_89953979_89956920_89957047_89957734
tx.1294	chr10	+	2965	3	FSM	ENSMUSG00000053684.9	ENSMUST00000136432.2	2968	3	-14	17	-13	-4	multi-exon	FALSE	canonical	3	27	junction_1	61	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACATGTATATATGGT	NA	False	NA	NA	False	NA	NA	NA	121575828	121588766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_121576116_121581402_121581522_121586207
tx.12940	chr9	-	1446	9	ISM	ENSMUSG00000062270.15	ENSMUST00000187771.8	1540	10	11923	-2	-4477	2	3prime_fragment	FALSE	canonical	3	3415	junction_7	1272.84207091846	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	NA	NA	NA	89984419	89973721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352
tx.12941	chr9	-	1814	13	FSM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	64	4	8	2	multi-exon	FALSE	canonical	3	323	junction_10	2408.59367105002	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	NA	NA	NA	89996704	89973721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
tx.12942	chr9	-	1739	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	81	4	5	2	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	441	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	NA	NA	NA	89996746	89973721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
tx.12943	chr9	+	1543	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	462	297	-130	4	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	227	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGATGTTACTTTACAA	NA	False	NA	NA	False	NA	NA	NA	92132264	92154034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
tx.12944	chr9	+	3621	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	28	0	-13	0	multi-exon	TRUE	canonical	3	58	junction_10	9.44264688775947	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424303	92490481	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
tx.12945	chr9	-	2629	13	ISM	ENSMUSG00000032407.15	ENSMUST00000078374.13	3520	27	27684	-579	-2068	579	3prime_fragment	FALSE	canonical	3	640	junction_10	62.9644410229562	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	NA	False	NA	NA	False	NA	NA	NA	95366365	95342451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222
tx.12946	chr9	-	3546	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	-7	-428	2	1	multi-exon	TRUE	canonical	0	0	junction_13	167.860448931548	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTGTTTTTTTGCCCA	8295	False	NA	NA	False	NA	NA	NA	95393945	95343029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
tx.12947	chr9	-	2756	26	ISM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	0	2997	0	-2997	5prime_fragment	FALSE	canonical	0	0	junction_11	173.075641267048	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAAAGGATGAATGTA	8302	False	NA	NA	False	NA	NA	NA	95393938	95346454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
tx.12948	chr9	+	1754	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	138	2546	138	867	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	313	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAGCCAGATAACCTT	8513	False	NA	NA	False	NA	NA	NA	95519791	95577603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
tx.12949	chr9	+	1254	6	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	40742	2548	-1963	865	3prime_fragment	FALSE	canonical	3	299	junction_5	9.35093578204877	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	355	False	NA	NA	False	NA	NA	NA	95560395	95577601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
tx.1295	chr10	+	3114	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	5	4	4	-4	multi-exon	FALSE	canonical	3	147	junction_1	1	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACATGTATATATGGT	NA	False	NA	NA	False	NA	NA	NA	121575846	121588766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_121576116_121581235_121581522_121586207
tx.12950	chr9	+	451	3	ISM	ENSMUSG00000032410.14	ENSMUST00000190665.2	3093	24	51968	-1	-10633	1	3prime_fragment	FALSE	canonical	3	55	junction_1	1.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTAAAATTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	95888882	95893919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_95888901_95893263_95893354_95893576
tx.12951	chr9	+	629	3	ISM	ENSMUSG00000032411.16	ENSMUST00000189606.7	1340	10	51618	-31	-189	27	3prime_fragment	FALSE	canonical	3	407	junction_1	14.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCTCATATGTGTCT	NA	False	NA	NA	False	NA	NA	NA	96192429	96200051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_96192742_96199529_96199636_96199840
tx.12952	chr9	-	1849	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	127	18	127	-18	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAAACTGATTTAAAACT	NA	False	NA	NA	False	NA	NA	NA	96246368	96214725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
tx.12953	chr4	+	205	1	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGGAACGGATTTAAAA	4731	False	NA	NA	False	NA	NA	NA	156190914	156191119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_156190900_156191100
tx.12954	chr9	-	1172	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	56	4	-9	-4	multi-exon	FALSE	canonical	3	1085	junction_1	10	608	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATGCTCTTTATTTGG	3769	False	NA	NA	False	NA	NA	NA	96360672	96352993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_96353906_96356010_96356059_96360460
tx.12955	chr9	-	857	8	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	-9	-7964	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	17.5324771524745	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTTTTTTCATATTA	NA	False	NA	NA	False	NA	NA	NA	96513598	96461904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_96462029_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
tx.12956	chr9	-	2917	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	-6	-3	-2	3	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACAGCTTACGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	96771488	96705393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
tx.12957	chr9	-	4689	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	96993179	96957623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
tx.12958	chr9	-	4590	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	27	610	27	-6	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	96993183	96957623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
tx.12959	chr9	-	4721	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	430.738156395507	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	96993220	96957623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
tx.1296	chr10	-	1446	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	201	3146	-14	0	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	121933075	121917164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
tx.12960	chr9	-	1974	4	FSM	ENSMUSG00000032449.14	ENSMUST00000148337.2	685	4	-149	-1140	21	1140	multi-exon	FALSE	canonical	3	669	junction_1	32.124756808418	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAAATGTTGATGT	NA	False	NA	NA	False	NA	NA	NA	96993189	96973725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_96975231_96979155_96979234_96982127_96982293_96992963
tx.12961	chr9	+	626	2	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTATTGACAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	97157767	97163943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr9_+_97157969_97163518
tx.12962	chr9	+	840	3	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	2.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGACAGGTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	97157791	97163946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr9_+_97157969_97160761_97160997_97163518
tx.12963	chr9	+	771	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1859	22	1859	-22	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTTTGGAGGAATTT	4744	False	NA	NA	False	NA	NA	NA	98306872	98328606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
tx.12964	chr9	+	3061	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	-11	0	-1	0	multi-exon	TRUE	canonical	3	669	junction_10	53.4673910412871	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGAGTTTCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	98445772	98470435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
tx.12965	chr9	+	2144	15	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	13292	0	-2928	0	3prime_fragment	FALSE	canonical	3	669	junction_3	61.8683592602149	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGAGTTTCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	98459075	98470435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
tx.12966	chr9	-	1201	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	442	junction_2	42.1929484387994	194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	False	NA	NA	False	NA	NA	NA	98483717	98470782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
tx.12967	chr9	+	1017	5	FSM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	0	2	0	-2	multi-exon	FALSE	canonical	3	266	junction_2	16.8430252627015	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGGGTTTGGTTTCA	3544	False	NA	NA	False	NA	NA	NA	98868425	98884072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_98868566_98874153_98874287_98874565_98874795_98881019_98881070_98883607
tx.12968	chr9	+	1073	6	FSM	ENSMUSG00000032463.11	ENSMUST00000112911.9	803	6	0	-270	0	-2	multi-exon	FALSE	canonical	3	19	junction_1	126.927695953247	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGGGTTTGGTTTCA	3545	False	NA	NA	False	NA	NA	NA	98868426	98884072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_98868566_98872967_98873025_98874153_98874287_98874565_98874795_98881019_98881070_98883607
tx.12969	chr9	+	2646	18	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	83.1088001619555	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	NA	False	NA	NA	NA	99125498	99182457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
tx.1297	chr10	-	1257	5	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	201	10524	-14	7	5prime_fragment	FALSE	canonical	3	258	junction_4	22.2078251974389	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTATCATATGCCAGAA	NA	False	NA	NA	False	NA	NA	NA	121933075	121924542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
tx.12970	chr9	+	2613	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	-7	0	-7	0	multi-exon	TRUE	canonical	3	165	junction_10	72.0150887688172	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	NA	False	NA	NA	NA	99125487	99182457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
tx.12971	chr9	+	1835	6	FSM	ENSMUSG00000056267.15	ENSMUST00000185799.7	740	6	73	-1168	-2	2	multi-exon	TRUE	canonical	3	66	junction_1	121.109867475776	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCTTGGTCATCATGT	NA	False	NA	NA	False	NA	NA	NA	99125492	99146983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
tx.12972	chr9	+	1790	6	FSM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	-20	-2	-1	2	multi-exon	FALSE	canonical	3	228	junction_1	56.4361586219332	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCTTGGTCATCATGT	NA	False	NA	NA	False	NA	NA	NA	99125493	99146983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
tx.12973	chr9	-	1346	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	804	2551	349	8	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCCCCAAGTCTTTGGC	4043	False	NA	NA	False	NA	NA	NA	99318630	99270023	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
tx.12974	chr9	-	1382	6	FSM	ENSMUSG00000032470.18	ENSMUST00000122384.9	1167	6	-262	47	193	4	multi-exon	FALSE	canonical	3	40	junction_5	190.404411713594	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCGAAGCCCCAAGTCTT	3432	False	NA	NA	False	NA	NA	NA	99319241	99270027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318933
tx.12975	chr9	-	1387	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-241	3	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCGAAGCCCCAAGTCT	2309	False	NA	NA	False	NA	NA	NA	99302446	99270028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
tx.12976	chr9	-	2894	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	32	1721	32	-1721	multi-exon	TRUE	canonical	3	93	junction_7	54.8151294142266	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATAGATTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	99450920	99362145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
tx.12977	chr9	-	3049	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-232	3	18	-3	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTTTTTATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	99450934	99400859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
tx.12978	chr9	-	1231	9	ISM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-236	7871	14	-7871	5prime_fragment	FALSE	canonical	3	193	junction_8	23.7276210354093	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGTCTTTAGGGTAA	NA	False	NA	NA	False	NA	NA	NA	99450938	99408727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
tx.12979	chr9	+	2199	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	17	45	-12	-45	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAATTATTCAATGTTA	6423	False	NA	NA	False	NA	NA	NA	99457868	99466509	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
tx.1298	chr10	-	3240	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	63	8222	-5	0	multi-exon	TRUE	canonical	3	236	junction_15	99.6636747895759	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTCTTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	123032837	122949132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
tx.12980	chr9	+	1132	2	Antisense	novelGene_ENSMUSG00000032473.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTTGAGACTCTTAAT	1493	False	NA	NA	False	NA	NA	NA	99577295	99581843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr9_+_99577420_99580835
tx.12981	chr9	-	1178	2	ISM	ENSMUSG00000032475.16	ENSMUST00000112874.4	1513	3	9090	0	9090	0	3prime_fragment	FALSE	canonical	3	124	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATATTGCATCTGT	NA	False	NA	NA	False	NA	NA	NA	100379819	100377055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_100377725_100379310
tx.12982	chr9	-	1766	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	0	2710	0	0	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATATTGCATCTGT	NA	False	NA	NA	False	NA	NA	NA	100428187	100377055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
tx.12983	chr9	+	383	3	FSM	ENSMUSG00000037286.16	ENSMUST00000144005.8	558	3	-34	209	-21	-190	multi-exon	FALSE	canonical	3	414	junction_1	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGGAAAAAGAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	100525631	100594553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_100525850_100587205_100587308_100594490
tx.12984	chr9	+	3182	5	ISM	ENSMUSG00000037286.16	ENSMUST00000138405.8	2637	13	-28	107001	-12	-16503	5prime_fragment	FALSE	canonical	3	359	junction_3	23.3171074535415	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATATTTTTACTCTGT	NA	False	NA	NA	False	NA	NA	NA	100525640	100642345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742
tx.12985	chr9	+	4874	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	173	1139	5	0	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	NA	False	NA	NA	NA	100525673	100839459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
tx.12986	chr9	-	1415	6	ISM	ENSMUSG00000032527.14	ENSMUST00000149322.8	2188	14	46861	4	-2407	-4	3prime_fragment	FALSE	canonical	3	76	junction_5	12.2539789456323	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTTGGGTGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	100870069	100864088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833
tx.12987	chr9	-	2306	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	10	4	-7	-4	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTTGGGTGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	100916941	100864088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
tx.12988	chr9	-	2114	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	-22	2088	-22	11	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATTACCACAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	102503755	102463874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
tx.12989	chr9	+	1259	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	205	3543	205	-3543	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAGTAGTAATTACATT	438	False	NA	NA	False	NA	NA	NA	102989210	103058932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
tx.1299	chr10	-	572	3	ISM	ENSMUSG00000020124.11	ENSMUST00000219937.2	1587	9	6291	0	-2113	0	3prime_fragment	FALSE	canonical	3	594	junction_1	23	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTCTTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	122957499	122949132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_122949593_122955013_122955103_122957476
tx.12990	chr9	-	1855	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.1596624119289	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGAGTCAAATGATGAG	NA	False	NA	NA	False	NA	NA	NA	103079328	103066285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_103066696_103066841_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
tx.12991	chr9	-	2348	17	FSM	ENSMUSG00000032554.16	ENSMUST00000035158.16	2571	17	142	81	-29	-81	multi-exon	FALSE	canonical	3	17	junction_12	9.88982273602515	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCCCAAACTCCATTCT	NA	False	NA	NA	False	NA	NA	NA	103107501	103086074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_103086278_103087693_103087878_103089010_103089196_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107372
tx.12992	chr9	+	2253	12	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	28838	0	1324	0	3prime_fragment	FALSE	canonical	3	578	junction_1	51.941002768478	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	2362	False	NA	NA	False	NA	NA	NA	103211251	103227627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
tx.12993	chr9	-	348	3	ISM	ENSMUSG00000032803.16	ENSMUST00000116517.9	3741	5	4940	2820	4940	0	3prime_fragment	FALSE	canonical	3	423	junction_1	47	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCATCAGATGGAAAATTT	NA	False	NA	NA	False	NA	NA	NA	103237156	103233122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_103233229_103233478_103233639_103237074
tx.12994	chr9	-	849	2	FSM	ENSMUSG00000042757.17	ENSMUST00000186455.3	1591	2	-80	822	-33	-822	multi-exon	FALSE	canonical	3	33	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTTCAAGAC	NA	False	NA	NA	False	NA	NA	NA	103639069	103629433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_103630167_103638953
tx.12995	chr9	-	1765	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	19	620	19	431	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTAAATGAGCTAAATAC	NA	False	NA	NA	False	NA	NA	NA	103940314	103924417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
tx.12996	chr9	+	3358	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	7	79	7	-79	multi-exon	FALSE	canonical	3	30	junction_7	6.62112793865633	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTTTCTTATTGTCA	NA	False	NA	NA	False	NA	NA	NA	103940891	104004845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
tx.12997	chr9	+	1519	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	29	2424	-2	-2	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	247	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGTTGTGAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	104930466	104954663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
tx.12998	chr9	-	1613	3	FSM	ENSMUSG00000032565.10	ENSMUST00000035179.9	1631	3	18	0	13	0	multi-exon	FALSE	canonical	3	25	junction_1	2	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTCTGGCTTCAATG	NA	False	NA	NA	False	NA	NA	NA	105009005	105006530	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_105007710_105008491_105008762_105008841
tx.12999	chr9	+	2529	6	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	20	junction_4	18.4932420089069	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	NA	NA	NA	105272584	105282666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
tx.13	chr1	-	5226	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-25	4548	-25	-4548	multi-exon	FALSE	canonical	3	96	junction_2	5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTACTTGAACTTT	NA	False	NA	NA	False	NA	NA	NA	9818632	9793394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_9795576_9807190_9807278_9815674
tx.130	chr1	-	1847	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	-71	3991	-71	250	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTACAGTTCAAGTGGAAT	NA	False	NA	NA	False	NA	NA	NA	52856918	52828576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
tx.1300	chr10	-	3133	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	26	1507	0	-15	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTTTGATGAATTATG	NA	False	NA	NA	False	NA	NA	NA	123032832	122949147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
tx.13000	chr9	+	2512	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-48	291	-48	0	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	NA	NA	NA	105272542	105282666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
tx.13001	chr9	-	1537	6	ISM	ENSMUSG00000020253.16	ENSMUST00000076258.13	1811	10	1565	0	421	0	intron_retention	FALSE	canonical	3	111	junction_3	13.1544669219243	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	5741	False	NA	NA	False	NA	NA	NA	106074576	106072149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002
tx.13002	chr9	-	1124	7	ISM	ENSMUSG00000020253.16	ENSMUST00000076258.13	1811	10	1637	3	-417	-3	3prime_fragment	FALSE	canonical	3	111	junction_3	12.8937969582276	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	5813	False	NA	NA	False	NA	NA	NA	106074504	106072152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425
tx.13003	chr9	+	1590	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	6	0	0	0	multi-exon	FALSE	canonical	3	299	junction_8	33.0111250186963	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	106080312	106092588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
tx.13004	chr9	+	1233	6	FSM	ENSMUSG00000023277.14	ENSMUST00000217523.2	819	6	-4	-410	-4	0	multi-exon	FALSE	canonical	3	299	junction_5	34.8906864363543	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	106089383	106092588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
tx.13005	chr9	-	2178	11	FSM	ENSMUSG00000032786.17	ENSMUST00000141118.9	3399	11	752	469	-32	0	multi-exon	TRUE	canonical	3	139	junction_7	18.0612845611822	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGTCCTGGTTAGTGTG	8530	False	NA	NA	False	NA	NA	NA	106125101	106111125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
tx.13006	chr9	+	1409	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	286	642	-33	1	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	186	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACATCTTACCCAGTC	9843	False	NA	NA	False	NA	NA	NA	106158545	106227078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
tx.13007	chr9	+	749	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	2142	junction_1	1217.38161642108	259	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	NA	False	NA	NA	NA	106306636	106308767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
tx.13008	chr9	+	1042	3	FSM	ENSMUSG00000048758.15	ENSMUST00000213448.2	845	3	-17	-180	0	0	multi-exon	FALSE	canonical	3	3966	junction_1	565.5	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	NA	False	NA	NA	NA	106306736	106308767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_106307214_106307506_106307572_106308267
tx.13009	chr9	+	857	4	FSM	ENSMUSG00000048758.15	ENSMUST00000217081.2	466	4	5	-396	5	0	multi-exon	FALSE	canonical	3	58	junction_1	2158.78427721613	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	NA	False	NA	NA	NA	106306765	106308767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_106307013_106307168_106307214_106307506_106307572_106308267
tx.1301	chr10	-	1051	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	-7	-1	0	1	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATTTTTTGGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	126737224	126723116	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
tx.13010	chr9	-	1430	15	FSM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	90	9	-27	0	multi-exon	FALSE	canonical	3	198	junction_14	78.143510052117	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	NA	False	NA	NA	NA	106315428	106310188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
tx.13011	chr9	-	1448	15	NNC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	129.549691041622	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	NA	False	NA	NA	NA	106315431	106310188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_106310464_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
tx.13012	chr9	-	1433	15	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_14	59.3909565025326	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	NA	False	NA	NA	NA	106315435	106310188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
tx.13013	chr9	-	1254	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	10	1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	104.893067242576	69	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	106324867	106317251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
tx.13014	chr9	+	1483	4	FSM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	262	0	-16	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTTTGCTGTCTCCGG	NA	False	NA	NA	False	NA	NA	NA	106325835	106330122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182
tx.13015	chr9	+	2184	14	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	98.5600468761896	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	1184	False	NA	NA	False	NA	NA	NA	106330624	106341211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_106330842_106331108_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
tx.13016	chr9	+	1834	13	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	99.8749217771909	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGTGCAGTAATACT	1600	False	NA	NA	False	NA	NA	NA	106331040	106341207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
tx.13017	chr9	+	2035	13	FSM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_11	32.902212016148	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	1600	False	NA	NA	False	NA	NA	NA	106331040	106341211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
tx.13018	chr9	+	1563	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	21	2	21	0	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	1251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	NA	False	NA	NA	NA	106354488	106362621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
tx.13019	chr9	-	1980	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	-84	0	2	0	multi-exon	TRUE	canonical	3	46	junction_5	161.744242555956	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	7888	False	NA	NA	False	NA	NA	NA	106563106	106535944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
tx.1302	chr10	-	1179	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	20	7	-17	-7	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGCTTAATGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	126866689	126858207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
tx.13020	chr9	-	1423	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	-26	-6	-14	0	multi-exon	FALSE	canonical	3	285	junction_5	67.9187750183997	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	7854	False	NA	NA	False	NA	NA	NA	106563140	106535944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
tx.13021	chr9	-	1585	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	-227	6	0	0	multi-exon	FALSE	canonical	3	151	junction_5	120.179865202121	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	7886	False	NA	NA	False	NA	NA	NA	106563108	106535950	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
tx.13022	chr9	-	868	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	36	1343	-26	-5	multi-exon	FALSE	canonical	3	771	junction_3	24.1660919471891	615	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTGGCACAGTATTC	NA	False	NA	NA	False	NA	NA	NA	106769142	106765956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
tx.13023	chr9	-	2729	11	FSM	ENSMUSG00000032577.17	ENSMUST00000035194.8	2816	11	85	2	-13	-2	multi-exon	FALSE	canonical	3	157	junction_10	23.3752005338992	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCTGGGTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	107166991	107132127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
tx.13024	chr9	+	2187	3	FSM	ENSMUSG00000032578.8	ENSMUST00000085102.6	2850	3	638	25	-46	19	multi-exon	FALSE	canonical	1	4	junction_1	1	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTTCAGTGGGGTGT	NA	False	NA	NA	False	NA	NA	NA	107173862	107179161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107174234_107177122_107177344_107177566
tx.13025	chr9	-	1195	10	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	0	7	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	55.2618905142583	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGCCAGTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	107215549	107204901	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107215479
tx.13026	chr9	-	1577	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	615	0	-7	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGTATTTTGTTATTA	NA	False	NA	NA	False	NA	NA	NA	107215549	107204897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
tx.13027	chr9	-	2419	10	ISM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	62	613	13	-5	intron_retention	FALSE	canonical	3	133	junction_9	21.7346511756779	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTATTTTGTTATTAAC	NA	False	NA	NA	False	NA	NA	NA	107215487	107204895	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199
tx.13028	chr9	-	1535	11	NNC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	53.3310416174295	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGCCAGTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	107215549	107204901	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214237_107214578_107215479
tx.13029	chr9	+	2085	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	88	21	88	-21	multi-exon	FALSE	canonical	3	142	junction_1	0	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTGGGCTCCGTCAG	NA	False	NA	NA	False	NA	NA	NA	107411231	107415851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107412529_107415063
tx.1303	chr10	+	1352	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	25	414	0	52	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGTGTGTGGCTCAGG	NA	False	NA	NA	False	NA	NA	NA	126877825	126881820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
tx.13030	chr9	-	1229	3	FSM	ENSMUSG00000037190.13	ENSMUST00000041459.9	1786	3	5	552	5	16	multi-exon	FALSE	canonical	3	104	junction_2	5	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGAGTTGAGGATGGTT	NA	False	NA	NA	False	NA	NA	NA	107419059	107416757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107417585_107418201_107418240_107418695
tx.13031	chr9	-	1135	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	43	-16	-23	16	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGAGTTGAGGATGGTT	NA	False	NA	NA	False	NA	NA	NA	107419349	107416757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
tx.13032	chr9	+	1433	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	8	0	-7	0	multi-exon	FALSE	canonical	3	98	junction_4	11.6721891691319	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTACTGCTTCAGCC	NA	False	NA	NA	False	NA	NA	NA	107419432	107422905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
tx.13033	chr9	+	1700	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	26	1	26	-1	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTTTGGACTCTATAG	NA	False	NA	NA	False	NA	NA	NA	107431807	107439461	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
tx.13034	chr9	+	1883	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	6	4	6	0	multi-exon	FALSE	canonical	3	208	junction_3	7.31816613336672	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTTCTTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	107446321	107449971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
tx.13035	chr9	+	1510	2	FSM	ENSMUSG00000079334.9	ENSMUST00000093785.6	2053	2	541	2	541	-2	multi-exon	FALSE	canonical	3	8	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTGG	NA	False	NA	NA	False	NA	NA	NA	107457856	107461247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107458135_107460015
tx.13036	chr9	+	1980	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	76	0	-8	0	multi-exon	TRUE	canonical	3	631	junction_11	35.5716016363504	329	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	NA	False	NA	NA	NA	107464916	107470237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
tx.13037	chr9	-	3000	17	ISM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	130	-139	-3	1	intron_retention	TRUE	canonical	3	40	junction_12	7.52054477747457	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGCTGGTTCCAGTGAGC	8288	False	NA	NA	False	NA	NA	NA	107482471	107475414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
tx.13038	chr9	-	2075	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	140	0	85	0	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4910	False	NA	NA	False	NA	NA	NA	107512426	107491323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
tx.13039	chr9	-	1586	9	FSM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	184	7	184	-7	multi-exon	FALSE	canonical	3	246	junction_1	364.681860496241	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAAACTTCCGTGTTCTT	5009	False	NA	NA	False	NA	NA	NA	107512327	107491330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
tx.1304	chr10	+	1371	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	48	634	-21	-11	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	1545	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTTTATTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	126899450	126903155	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
tx.13040	chr9	-	1793	16	FSM	ENSMUSG00000010064.16	ENSMUST00000193932.6	2463	16	44	626	-8	-626	multi-exon	FALSE	canonical	0	0	junction_10	1.9731531449265	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCCGTTGGAAGGTTT	9823	False	NA	NA	False	NA	NA	NA	107544581	107528985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107529238_107529327_107529432_107532221_107532367_107532454_107532580_107532783_107532885_107533133_107533214_107533298_107533470_107533654_107533714_107533793_107533877_107534828_107534911_107535008_107535102_107535192_107535267_107535835_107535952_107536130_107536210_107536293_107536444_107544502
tx.13041	chr9	-	3084	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	-4	125	-4	0	multi-exon	FALSE	canonical	3	262	junction_19	112.690456068333	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	9701	False	NA	NA	False	NA	NA	NA	107648199	107617694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
tx.13042	chr9	-	2136	17	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_15	79.7133291473264	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7580	False	NA	NA	False	NA	NA	NA	107749953	107650761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
tx.13043	chr9	-	3941	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	58	0	0	0	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7563	False	NA	NA	False	NA	NA	NA	107749970	107650757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
tx.13044	chr9	-	291	2	ISM	ENSMUSG00000032582.15	ENSMUST00000181986.8	2066	16	98126	-4	5664	0	3prime_fragment	FALSE	canonical	3	441	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7140	False	NA	NA	False	NA	NA	NA	107651836	107650761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_107651007_107651790
tx.13045	chr9	-	3073	19	ISM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	19777	0	-1611	0	3prime_fragment	FALSE	canonical	3	211	junction_18	55.8402980730663	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	107730243	107650761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323
tx.13046	chr9	-	3669	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	47	0	1	0	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7560	False	NA	NA	False	NA	NA	NA	107749973	107650761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
tx.13047	chr9	+	2083	6	FSM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	-48	7	-17	-2	multi-exon	FALSE	canonical	3	19	junction_2	6.62117814289874	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGCCCTTTGTCATT	NA	False	NA	NA	False	NA	NA	NA	107765332	107780331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107765602_107775870_107776011_107777225_107777715_107778393_107779160_107779814_107779963_107780060
tx.13048	chr9	+	3042	11	FSM	ENSMUSG00000032936.14	ENSMUST00000035700.14	3277	11	235	0	1	0	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTTGCCTTTGCTTCCT	NA	False	NA	NA	False	NA	NA	NA	107813107	107826890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
tx.13049	chr9	+	1957	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	9	740	-2	5	multi-exon	TRUE	canonical	3	256	junction_7	39.1366001255571	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGCTGTATAAATTT	NA	False	NA	NA	False	NA	NA	NA	107828163	107848729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
tx.1305	chr10	-	1564	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	-17	9	-17	-9	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGTCTTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	126906150	126903157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
tx.13050	chr9	-	1041	2	FSM	ENSMUSG00000042106.6	ENSMUST00000048568.6	1025	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	12	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTCCCATACTCCTG	9740	False	NA	NA	False	NA	NA	NA	107863094	107861421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107862264_107862895
tx.13051	chr9	+	4320	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	239	0	69	0	multi-exon	FALSE	canonical	3	206	junction_5	50.8700304698159	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6959	False	NA	NA	False	NA	NA	NA	107879938	107925981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
tx.13052	chr9	+	1692	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	-51	-212	5	-2	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGCAGTCCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	107926472	107929113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
tx.13053	chr9	+	1781	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	37	884	10	1	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGTCCTTGTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	107926477	107929116	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
tx.13054	chr9	+	2260	18	FSM	ENSMUSG00000032591.16	ENSMUST00000035211.14	2262	18	-1	3	-1	2	multi-exon	FALSE	canonical	3	16	junction_13	9.09998288906715	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGAGTGCTTCTTAGT	6662	False	NA	NA	False	NA	NA	NA	107957633	107962199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
tx.13055	chr9	+	1757	12	NNC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	1570	1	intron_retention	FALSE	canonical	2	2	junction_6	14.0118014014043	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTGCTTCTTAGTTTCT	8280	False	NA	NA	False	NA	NA	NA	107959251	107962203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_107959321_107959401_107959521_107959663_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960797_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
tx.13056	chr9	-	2392	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	125	1	-2	0	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	NA	False	NA	NA	NA	107971680	107962612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
tx.13057	chr9	-	1766	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5468	2549	5468	-2549	3prime_fragment	TRUE	canonical	3	14	junction_1	4.12310562561766	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTAATTGCAAACATGC	3771	False	NA	NA	False	NA	NA	NA	107982144	107975770	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
tx.13058	chr9	+	2119	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	14	0	-1	0	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	108167641	108173697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
tx.13059	chr9	+	2059	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	18	5	18	-5	multi-exon	TRUE	canonical	3	166	junction_5	15.4029218007494	178	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTATGGTCTCTAGCTT	NA	False	NA	NA	False	NA	NA	NA	108174086	108179496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
tx.1306	chr10	+	408	2	FSM	ENSMUSG00000112639.2	ENSMUST00000217874.2	329	2	-72	-7	34	7	multi-exon	FALSE	canonical	3	25	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTAAATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	126906277	126906977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_126906494_126906785
tx.13060	chr9	-	1617	3	FSM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	173	-696	3	0	multi-exon	TRUE	canonical	3	19	junction_2	5	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTGTGGTTATTCAA	7288	False	NA	NA	False	NA	NA	NA	108183186	108180156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_108181453_108182524_108182580_108182920
tx.13061	chr9	+	641	5	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	232	2790	-78	-1590	5prime_fragment	FALSE	canonical	3	1457	junction_4	50.6236110920586	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCACACGAGACGGGAGT	NA	False	NA	NA	False	NA	NA	NA	108183559	108212343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249
tx.13062	chr9	+	1953	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	244	0	-66	0	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	700	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTATTCTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	108183571	108215133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
tx.13063	chr9	+	852	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	219	1	-3	-1	multi-exon	FALSE	canonical	3	8868	junction_1	0	8999	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTGTGTCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	108216471	108217541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108216758_108216975
tx.13064	chr9	+	3567	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	41	54	-3	-29	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGCTCTCCCTTAAAAGA	NA	False	NA	NA	False	NA	NA	NA	108225092	108269690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
tx.13065	chr9	+	1694	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	15	1383	7	-1251	multi-exon	FALSE	canonical	3	208	junction_1	0	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGGTCTCCTTGCTCA	202	False	NA	NA	False	NA	NA	NA	108337740	108341754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108337817_108340136
tx.13066	chr9	+	2444	24	FSM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	352	4	0	1	multi-exon	FALSE	canonical	3	468	junction_2	39.8133167299073	362	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTCTCTCTGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	108385256	108393136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
tx.13067	chr9	+	2079	22	ISM	ENSMUSG00000032604.17	ENSMUST00000208214.2	2398	24	892	5	503	0	3prime_fragment	FALSE	canonical	3	473	junction_5	37.0130209361633	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	108386149	108393135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
tx.13068	chr9	+	3222	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-9	-173	-2	2	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1161	False	NA	NA	False	NA	NA	NA	108394299	108437364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
tx.13069	chr9	+	1697	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	150	11	-3	4	multi-exon	TRUE	canonical	3	1280	junction_13	396.993628196225	1797	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1145	False	NA	NA	False	NA	NA	NA	108437634	108442772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
tx.1307	chr10	-	2475	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	-17	0	-11	0	multi-exon	FALSE	canonical	3	172	junction_9	22.2351605990131	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	False	NA	NA	False	NA	NA	NA	126957011	126931518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
tx.13070	chr9	-	688	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	471	328	-33	-4	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTTGTTGCTCAGTT	8614	False	NA	NA	False	NA	NA	NA	108444162	108443063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
tx.13071	chr9	+	1746	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	-1	1	-1	0	multi-exon	FALSE	canonical	3	83	junction_8	26.2473926292634	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	NA	False	NA	NA	NA	108447083	108449972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
tx.13072	chr9	-	1797	9	FSM	ENSMUSG00000006675.11	ENSMUST00000006853.11	1841	9	79	-35	-8	35	multi-exon	FALSE	canonical	2	23	junction_3	12.7273082385868	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTAGTCTCATGTGTG	NA	False	NA	NA	False	NA	NA	NA	108474787	108456025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
tx.13073	chr9	-	4073	16	Fusion	ENSMUSG00000064145.13_ENSMUSG00002076266.1	novel	3924	16	NA	NA	-145	0	multi-exon	TRUE	canonical	3	34	junction_15	215.945013577274	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	108531072	108480140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108530771
tx.13074	chr9	-	2647	5	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	40637	4	-60	1	3prime_fragment	FALSE	canonical	3	834	junction_4	22.0510770711999	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCTGTGGAGTCTTTT	4592	False	NA	NA	False	NA	NA	NA	108485942	108480144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800
tx.13075	chr9	-	3950	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	243.725439467754	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	108526562	108480140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
tx.13076	chr9	-	3915	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	359	junction_14	154.606683771002	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCTGTGGAGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	108526577	108480144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
tx.13077	chr9	-	2028	15	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	4402	1728	-878	16	3prime_fragment	FALSE	canonical	3	517	junction_5	114.716420545871	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	NA	False	NA	NA	NA	108522177	108481868	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131
tx.13078	chr9	-	2196	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	0	1728	0	16	multi-exon	FALSE	canonical	3	517	junction_5	114.47891605978	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	NA	False	NA	NA	NA	108526579	108481868	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
tx.13079	chr9	-	2227	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	4	16	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	NA	False	NA	NA	NA	108526564	108481868	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
tx.1308	chr10	-	988	4	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	54.0760780957922	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	127031589	127026246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_127026909_127029598_127029673_127030278_127030504_127031562
tx.13080	chr9	+	1750	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	34	-1	34	1	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGTGTGATATTTTCTC	5111	False	NA	NA	False	NA	NA	NA	108539330	108561841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
tx.13081	chr9	+	1109	3	FSM	ENSMUSG00000032599.13	ENSMUST00000194875.6	748	3	-59	-302	10	0	multi-exon	FALSE	canonical	2	13	junction_2	53	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGTAGTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	108661004	108675193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108661070_108673262_108673596_108674482
tx.13082	chr9	+	1314	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-58	-649	11	0	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGTAGTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	108661005	108675193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
tx.13083	chr9	+	1175	3	FSM	ENSMUSG00000032599.13	ENSMUST00000192307.6	1191	3	21	-5	-5	0	multi-exon	FALSE	canonical	3	25	junction_2	47	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGTAGTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	108661015	108675193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108661070_108673262_108673596_108674405
tx.13084	chr9	+	2671	21	FSM	ENSMUSG00000023259.18	ENSMUST00000188557.8	2552	21	-98	-21	0	0	multi-exon	TRUE	canonical	3	10	junction_1	9.81121806912883	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCTGTGGCATGGTC	NA	False	NA	NA	False	NA	NA	NA	108731235	108742117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108731386_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
tx.13085	chr9	+	1587	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	66	0	-15	0	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	2797	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	NA	False	NA	NA	NA	108765766	108778691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
tx.13086	chr9	+	1828	6	FSM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	25	57	5	-4	multi-exon	FALSE	canonical	3	51	junction_2	78.9186923358465	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTCCCCTTTCTTCAGC	NA	False	NA	NA	False	NA	NA	NA	108867657	108886788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108867833_108869937_108870095_108880431_108880522_108885045_108885162_108885354_108885574_108885717
tx.13087	chr9	+	1827	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	5	2	5	-2	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCCTTTCTTCAGCGC	NA	False	NA	NA	False	NA	NA	NA	108867657	108886790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
tx.13088	chr9	+	1502	4	FSM	ENSMUSG00000025647.17	ENSMUST00000154184.5	1038	4	48	-512	-37	-5	multi-exon	FALSE	canonical	3	51	junction_1	98.8005847935909	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTTCCCCTTTCTTCAG	NA	False	NA	NA	False	NA	NA	NA	108883978	108886787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108884076_108885045_108885162_108885354_108885574_108885717
tx.13089	chr9	-	2566	13	FSM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	6	0	2	0	multi-exon	FALSE	canonical	3	123	junction_2	14.834971819619	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCCTGAGTCCGA	NA	False	NA	NA	False	NA	NA	NA	108903186	108888814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
tx.1309	chr10	-	3333	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	-26	0	4	0	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	127047450	127032935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
tx.13090	chr9	-	637	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	206	101	-3	-101	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	545	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTGTGTGTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	108911449	108907055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
tx.13091	chr9	+	1530	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	0	-4	0	4	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATCAGACTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	108911560	108921561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
tx.13092	chr9	+	1059	7	FSM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	13	2	0	-2	multi-exon	FALSE	canonical	3	194	junction_1	146.935359937627	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTGTGCAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	109661838	109672040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
tx.13093	chr9	+	1123	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	38	-442	0	-3	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCCTGTGCAAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	109661854	109672039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
tx.13094	chr9	+	893	6	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	120.044325147006	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCTGCTTTGGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	109760886	109857189	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109856966
tx.13095	chr9	-	3764	19	FSM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	42	0	-6	0	multi-exon	FALSE	canonical	3	264	junction_18	79.7176537599273	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	NA	False	NA	NA	NA	109930113	109913387	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
tx.13096	chr9	-	1486	2	FSM	ENSMUSG00000032480.18	ENSMUST00000196788.2	1424	2	-46	-16	-1	16	multi-exon	FALSE	canonical	3	279	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	109946488	109943227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_109944651_109946425
tx.13097	chr9	+	3543	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	-7	2	-7	-2	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCATAGTTCCTGGCT	2495	False	NA	NA	False	NA	NA	NA	109961097	110064357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
tx.13098	chr9	+	1143	8	ISM	ENSMUSG00000032481.18	ENSMUST00000197480.5	1949	15	14	19138	14	18107	5prime_fragment	FALSE	canonical	3	1285	junction_2	51.7063924520766	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCACTCTGGCTTA	2516	False	NA	NA	False	NA	NA	NA	109961118	109994233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869
tx.13099	chr9	+	2565	23	ISM	ENSMUSG00000032481.18	ENSMUST00000200237.5	3078	25	2	9538	2	-1828	5prime_fragment	FALSE	canonical	3	1144	junction_15	79.0118727347849	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACTTGGGCCCGAGCAT	2504	False	NA	NA	False	NA	NA	NA	109961106	110033393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279
tx.131	chr1	+	1709	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-3	124	-1	-119	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTGTGTTGATGCCTTA	NA	False	NA	NA	False	NA	NA	NA	52884201	52960021	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
tx.1310	chr10	-	3045	11	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_1	114.041264461597	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTCACAGAAGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	127047462	127032939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_127034618_127034913_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
tx.13100	chr9	+	2136	4	FSM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	-28	-1	-28	0	multi-exon	TRUE	canonical	3	35	junction_3	9.53356643071673	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTAGTGCCGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	110075104	110091644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_110076459_110080026_110080216_110085212_110085289_110091127
tx.13101	chr9	+	1283	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	23	-2	-8	2	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGAGGTTGTCTTTTT	2205	False	NA	NA	False	NA	NA	NA	110134263	110150393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
tx.13102	chr9	+	1008	2	ISM	ENSMUSG00000044791.17	ENSMUST00000197399.2	767	6	15151	-466	-276	0	3prime_fragment	FALSE	canonical	3	155	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCCTCAAAATTA	NA	False	NA	NA	False	NA	NA	NA	110446392	110447682	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_110446604_110446885
tx.13103	chr9	-	1195	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	28	0	7	0	multi-exon	TRUE	canonical	3	119	junction_3	3.96074487943871	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	8952	False	NA	NA	False	NA	NA	NA	110453492	110450202	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
tx.13104	chr9	+	799	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	22	13	0	0	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	571	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTGTTTCATTTCCT	8504	False	NA	NA	False	NA	NA	NA	110485592	110540661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
tx.13105	chr9	+	1466	5	FSM	ENSMUSG00000048752.8	ENSMUST00000051097.6	1456	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	8	junction_3	2.54950975679639	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTCCTTTCTGAGCC	NA	False	NA	NA	False	NA	NA	NA	110687024	110693697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_110687528_110690327_110690491_110691329_110691614_110692797_110692965_110693348
tx.13106	chr9	-	1876	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	51	5	-13	-5	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	1400	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTGAGTAGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	110775175	110768675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
tx.13107	chr9	+	1957	9	NIC	ENSMUSG00000032495.9	novel	666	5	NA	NA	-165	-1823	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	99.4054198723591	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATTTCAGTATACTG	NA	False	NA	NA	False	NA	NA	NA	110782701	110811311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_110782957_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
tx.13108	chr9	+	1748	6	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-370	-1831	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	108.012962185101	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAGAAAATATTTCA	NA	False	NA	NA	False	NA	NA	NA	110789531	110811303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_110790078_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
tx.13109	chr9	+	1649	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-112	-1829	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_4	82.1734277137216	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAATATTTCAGT	NA	False	NA	NA	False	NA	NA	NA	110789789	110811305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
tx.1311	chr10	+	1808	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-23	-1	-4	1	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	258	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGAGTTTCAAAATAT	9193	False	NA	NA	False	NA	NA	NA	127102232	127117820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
tx.13110	chr9	+	1628	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	9183	1824	-106	-1824	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	83	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATATTTCAGTATACT	NA	False	NA	NA	False	NA	NA	NA	110789795	110811310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
tx.13111	chr9	+	1410	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-50	-1829	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	83.1033092000553	30	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAATATTTCAGT	NA	False	NA	NA	False	NA	NA	NA	110789851	110811305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
tx.13112	chr9	+	1664	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	175	0	153	0	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	110947355	111053290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
tx.13113	chr9	+	906	8	ISM	ENSMUSG00000032497.20	ENSMUST00000217117.2	1363	12	17458	0	331	0	3prime_fragment	FALSE	canonical	3	202	junction_2	10.4705612581764	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	1487	False	NA	NA	False	NA	NA	NA	111028852	111053290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
tx.13114	chr9	-	668	4	ISM	ENSMUSG00000032498.10	ENSMUST00000135218.8	3762	18	40571	13	-27	-13	3prime_fragment	FALSE	canonical	0	0	junction_3	180.765655538385	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	2781	False	NA	NA	False	NA	NA	NA	111060043	111057308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968
tx.13115	chr9	-	2517	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	251	-14	6	-13	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	NA	False	NA	NA	NA	111100608	111057308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
tx.13116	chr9	+	2141	4	ISM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	28989	0	28989	0	3prime_fragment	FALSE	canonical	3	22	junction_1	4.96655480858378	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	7235	False	NA	NA	False	NA	NA	NA	111297137	111318186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_111298384_111311685_111311819_111313984_111314153_111317592
tx.13117	chr9	+	763	2	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	47951	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	0	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	3985	False	NA	NA	False	NA	NA	NA	111316099	111318186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_111316269_111317592
tx.13118	chr9	-	3201	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	22	2728	7	0	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	113537305	113483539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
tx.13119	chr9	+	1750	3	ISM	ENSMUSG00000009741.16	ENSMUST00000216891.2	3997	14	41223	201	3627	0	3prime_fragment	FALSE	canonical	3	381	junction_1	24	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	8567	False	NA	NA	False	NA	NA	NA	113801919	113806069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_113801962_113802586_113802639_113804413
tx.1312	chr10	+	871	4	FSM	ENSMUSG00000025408.16	ENSMUST00000026475.15	890	4	19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	321.555593949165	971	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCACTTTTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	127126661	127132157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_127126761_127129580_127129629_127131189_127131348_127131591
tx.13120	chr9	-	2191	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	14	1259	14	71	multi-exon	FALSE	canonical	3	21	junction_13	8.10139821643304	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAATGACGTATTTG	NA	False	NA	NA	False	NA	NA	NA	113855815	113807033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
tx.13121	chr9	-	2198	15	NIC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-3	11	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	11.0628999408853	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGATGTGGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	113875262	113807093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113875140
tx.13122	chr9	+	341	3	ISM	ENSMUSG00000074039.11	ENSMUST00000124664.8	1285	4	-29	8167	-29	-2102	5prime_fragment	FALSE	canonical	3	21	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTATGAAATCTAGAT	NA	False	NA	NA	False	NA	NA	NA	114197341	114198130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_114197553_114197911_114197968_114198056
tx.13123	chr9	-	1099	5	ISM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	5687	2	5687	-2	3prime_fragment	FALSE	canonical	3	595	junction_4	28.9169068193678	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTCTCCGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	114214056	114204203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763
tx.13124	chr9	+	2546	10	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	17	29880	-15	-29880	5prime_fragment	FALSE	canonical	3	295	junction_2	41.9046536795139	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGAGTCTGGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	114230160	114273565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076
tx.13125	chr9	+	2354	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	43	-1	11	1	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	NA	False	NA	NA	NA	114230186	114303446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
tx.13126	chr9	+	3228	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	14	-321	14	321	multi-exon	FALSE	canonical	3	40	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACATCT	NA	False	NA	NA	False	NA	NA	NA	114230186	114236665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_114230338_114233588
tx.13127	chr9	+	2210	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	76.8975265651421	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	NA	False	NA	NA	NA	114230160	114303446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
tx.13128	chr9	+	879	3	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	58567	-1	58535	1	3prime_fragment	FALSE	canonical	3	384	junction_2	34.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	NA	False	NA	NA	NA	114288710	114303446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_114288794_114293111_114293367_114302905
tx.13129	chr9	-	2739	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	-107	221	0	-133	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	114469249	114415166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
tx.1313	chr10	-	2831	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	103	5	-5	0	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	197	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	127147552	127132094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
tx.13130	chr9	-	2718	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-14	-135	combination_of_known_splicesites	FALSE	canonical	3	267	junction_4	76.1876338755546	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	114469266	114415168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
tx.13131	chr9	+	2648	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	-34	-13	-34	13	multi-exon	FALSE	canonical	3	336	junction_8	45.3210767744986	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTTGCCTTTTCTTA	2092	False	NA	NA	False	NA	NA	NA	114517823	114553383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
tx.13132	chr9	+	3370	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	13	0	13	0	multi-exon	FALSE	canonical	3	606	junction_3	12.8322510366134	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	NA	False	NA	NA	NA	114560253	114578412	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
tx.13133	chr9	-	999	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	-4	-2	3	2	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	728	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTATTGCATGAGATG	NA	False	NA	NA	False	NA	NA	NA	114610921	114585901	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
tx.13134	chr9	+	3196	12	FSM	ENSMUSG00000040875.13	ENSMUST00000182384.8	2158	12	10	-1048	10	1048	multi-exon	FALSE	canonical	1	3	junction_1	20.7380354832004	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTGTCTTGTGTTATT	NA	False	NA	NA	False	NA	NA	NA	114819825	115062341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_114819891_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
tx.13135	chr9	+	2205	5	ISM	ENSMUSG00000040875.13	ENSMUST00000046627.6	1872	10	149232	-1050	95972	1048	3prime_fragment	FALSE	canonical	3	73	junction_2	2.54950975679639	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTGTCTTGTGTTATT	6047	False	NA	NA	False	NA	NA	NA	115045578	115062341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
tx.13136	chr9	-	1866	4	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	59569	0	59569	0	3prime_fragment	FALSE	canonical	3	727	junction_2	45.7238085319527	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	NA	False	NA	NA	NA	115079920	115071648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846
tx.13137	chr9	+	3384	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTATTTTGTGATTCA	9597	False	NA	NA	False	NA	NA	NA	117869578	117892907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
tx.13138	chr9	+	1222	5	ISM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-18	8754	4	71	5prime_fragment	FALSE	canonical	3	140	junction_4	16.3783393541592	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGGTTGTGTCTTAATT	9647	False	NA	NA	False	NA	NA	NA	117869628	117880798	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421
tx.13139	chr9	-	519	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	83	567	69	6	multi-exon	TRUE	canonical	3	173	junction_1	9.03081145609604	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCTGATTTATTAAATA	NA	False	NA	NA	False	NA	NA	NA	117979162	117894156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
tx.1314	chr10	+	1721	12	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	1888	-3	1321	3	3prime_fragment	FALSE	canonical	3	51	junction_1	7.05117070169648	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATAGACTAAATACAG	NA	False	NA	NA	False	NA	NA	NA	127161512	127165815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
tx.13140	chr9	-	509	4	NNC	ENSMUSG00000098161.2	novel	388	4	NA	NA	-60	25929	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	21.6384431561566	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGATTAGGATCACACCT	NA	False	NA	NA	False	NA	NA	NA	118235227	118207235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_118207408_118233371_118233493_118233797_118233891_118235104
tx.13141	chr9	+	1444	9	NIC	ENSMUSG00000038775.15	novel	1645	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	9.33993442161132	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	118892516	118900394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_118892670_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118899345_118899418_118899624_118899883_118900201
tx.13142	chr9	-	2704	15	FSM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	8	-6	8	6	multi-exon	TRUE	canonical	3	27	junction_4	6.31163486696415	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCTCTTTACAAAGACAC	8087	False	NA	NA	False	NA	NA	NA	118917321	118900588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
tx.13143	chr9	-	1357	7	NNC	ENSMUSG00000092212.4	novel	1458	6	NA	NA	7896	0	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_2	1.89296944860009	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTTGTACTGTCTACT	NA	False	NA	NA	False	NA	NA	NA	119052862	119049553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_119049990_119050186_119050403_119051512_119051622_119051804_119052020_119052238_119052334_119052418_119052540_119052697
tx.13144	chr9	-	1938	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	17	5	17	-5	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACTTGTGACTGACGGT	NA	False	NA	NA	False	NA	NA	NA	119169090	119165004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
tx.13145	chr9	+	1671	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	87	4	-33	-3	multi-exon	TRUE	canonical	3	245	junction_2	23.8777880116768	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGCTTGTCATTTCC	7815	False	NA	NA	False	NA	NA	NA	119170446	119179361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
tx.13146	chr9	+	3159	18	FSM	ENSMUSG00000035769.10	ENSMUST00000215822.2	3134	18	-21	-4	-21	4	multi-exon	FALSE	canonical	3	22	junction_2	17.3265002945415	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	119186613	119222399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
tx.13147	chr9	+	3195	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	201	-13	-5	4	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	119186647	119222399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
tx.13149	chr9	+	3828	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	17	0	0	0	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGCTGGACATGT	NA	False	NA	NA	False	NA	NA	NA	119723960	119755652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
tx.1315	chr10	+	937	4	FSM	ENSMUSG00000040280.11	ENSMUST00000035735.11	934	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	101	junction_1	3.29983164553722	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCGCCTGCTAATCA	NA	False	NA	NA	False	NA	NA	NA	127350832	127353023	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_127350908_127351267_127351357_127352133_127352195_127352311
tx.13150	chr9	-	2560	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	15	1331	0	-1331	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAACTAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	119766616	119755653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
tx.13151	chr9	+	1608	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	7	176	7	-176	multi-exon	FALSE	canonical	3	111	junction_3	17.3173002771474	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCAGGGTGGAGACTGT	1767	False	NA	NA	False	NA	NA	NA	119939446	119953394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
tx.13152	chr9	+	1031	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	98	809	-2	1	multi-exon	FALSE	canonical	3	2998	junction_3	1065.2190176464	7461	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGGTCCTCACTGCAGA	NA	False	NA	NA	False	NA	NA	NA	119956852	119960626	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
tx.13153	chr9	+	788	4	FSM	ENSMUSG00000032517.17	ENSMUST00000068698.15	1536	4	34	714	-1	526	multi-exon	FALSE	canonical	3	15	junction_3	2.44948974278318	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCGTGGCTTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	119978806	119997730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_119997288
tx.13154	chr9	+	893	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	142	0	142	0	multi-exon	FALSE	canonical	3	407	junction_2	26.9608770051883	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAATGCACTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	120321698	120324396	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
tx.13155	chr9	+	728	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	62	219	-8	0	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	5502	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	NA	False	NA	NA	NA	120400571	120403501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
tx.13156	chr9	-	1823	2	FSM	ENSMUSG00000111831.2	ENSMUST00000215385.2	790	2	499	-1532	499	1532	multi-exon	FALSE	canonical	3	5	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTATCAGCGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	120579710	120571123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_120572855_120579618
tx.13157	chr9	+	3535	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	88	0	2	0	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	120762553	120789573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
tx.13158	chr9	+	2731	11	ISM	ENSMUSG00000006932.18	ENSMUST00000163844.8	2222	14	1156	-990	288	0	3prime_fragment	FALSE	canonical	3	564	junction_2	60.8601675975346	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	120780442	120789573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
tx.13159	chr9	+	570	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	7	0	7	0	multi-exon	FALSE	canonical	3	377	junction_1	21	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	NA	False	NA	NA	NA	121539401	121541987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_121539538_121539704_121539782_121541630
tx.1316	chr10	-	2069	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	43	177	0	-177	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	399	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	NA	False	NA	NA	NA	127358270	127353184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
tx.13160	chr9	+	187	2	FSM	ENSMUSG00000032526.12	ENSMUST00000215966.2	2316	2	-5	2134	-5	-2020	multi-exon	FALSE	canonical	3	377	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGCGAACGAGTGCGTCC	NA	False	NA	NA	False	NA	NA	NA	121539406	121539760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_121539538_121539704
tx.13161	chr9	-	516	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	744	972	-5	3	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	760	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGTATTGAATATTGGTT	NA	False	NA	NA	False	NA	NA	NA	121686684	121678600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
tx.13162	chr9	-	2361	2	FSM	ENSMUSG00000066235.8	ENSMUST00000084743.7	2365	2	4	0	4	0	multi-exon	FALSE	canonical	3	12	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	NA	False	NA	NA	NA	121825087	121810674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_121812890_121824941
tx.13163	chr9	-	2615	13	FSM	ENSMUSG00000037949.9	ENSMUST00000042546.4	2653	13	35	3	-2	-3	multi-exon	FALSE	canonical	3	21	junction_1	6.44797556515911	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGGCAAATGTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	122123454	122004942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
tx.13164	chr9	+	1301	6	NIC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	-44	7	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	35.2363448728724	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTTTTCAGCTGAGA	NA	False	NA	NA	False	NA	NA	NA	122180750	122208897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_122180905_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
tx.13165	chr9	+	916	5	FSM	ENSMUSG00000032540.17	ENSMUST00000111497.5	2576	5	-44	1704	-44	-5	multi-exon	FALSE	canonical	2	13	junction_1	33.7073804974519	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACTGAAAAATTGTGATT	NA	False	NA	NA	False	NA	NA	NA	122180750	122208885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_122180905_122204970_122205126_122206923_122207036_122207886_122208074_122208577
tx.13166	chr9	+	3090	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	67	0	-55	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122180739	122210589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
tx.13167	chr9	+	3044	11	FSM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	3	2	3	-2	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCGTTCCAGGATTTC	NA	False	NA	NA	False	NA	NA	NA	122634606	122665397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
tx.13168	chr9	-	1300	7	NIC	ENSMUSG00000047036.9	novel	1220	6	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	48.2680593721724	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGAGCGGTCATGTTCT	NA	False	NA	NA	False	NA	NA	NA	122695057	122673592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_122673712_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694978
tx.13169	chr9	+	2020	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGTTTTAACTGTAT	4864	False	NA	NA	False	NA	NA	NA	122752126	122760093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
tx.1317	chr10	-	2068	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	43	178	0	-178	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	743	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	NA	False	NA	NA	NA	127358270	127353185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
tx.13170	chr9	-	908	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	5	2448	5	-2	multi-exon	FALSE	canonical	3	36	junction_2	10	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTCTTAGTCACTGTT	NA	False	NA	NA	False	NA	NA	NA	122780060	122776601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_122777174_122777989_122778135_122779869
tx.13171	chr9	+	1076	5	ISM	ENSMUSG00000036768.7	ENSMUST00000216062.2	669	6	2289	-504	228	0	3prime_fragment	FALSE	canonical	3	211	junction_3	21.7944947177034	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	NA	False	NA	NA	NA	122843003	122847798	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
tx.13172	chr9	+	1030	3	FSM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	15	-4	15	4	multi-exon	FALSE	canonical	3	26	junction_2	1.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATATGGAATTTGAGGG	NA	False	NA	NA	False	NA	NA	NA	122850405	122852556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_122850636_122851230_122851378_122851903
tx.13173	chr9	-	1865	5	ISM	ENSMUSG00000025786.18	ENSMUST00000129862.2	600	7	11253	-1468	11253	0	3prime_fragment	FALSE	canonical	3	232	junction_1	26.1474186106392	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	122918161	122905896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096
tx.13174	chr9	+	1024	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	27	2	0	0	multi-exon	FALSE	canonical	3	1140	junction_3	103.377058995362	656	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGTTGTTAGCATCT	NA	False	NA	NA	False	NA	NA	NA	122942306	122965192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
tx.13175	chr9	+	3543	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	15	0	15	0	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGTTGGTACTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	123358838	123421665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
tx.13176	chr9	-	1388	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	38	2644	-5	397	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTTAATTTATCTAAT	NA	False	NA	NA	False	NA	NA	NA	123546652	123528720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
tx.13177	chr9	-	1735	4	NNC	ENSMUSG00000110834.2	novel	461	4	NA	NA	-84	1819	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	29.8477618740315	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	124044853	124031168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_124032567_124033755_124033817_124033999_124034127_124044704
tx.13178	chr9	-	533	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	-57	-15	-57	15	multi-exon	FALSE	canonical	3	27	junction_1	43.70608907489	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGGAATGTGAAAATTC	NA	False	NA	NA	False	NA	NA	NA	124044826	124032972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
tx.13179	chr9	-	331	2	ISM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	10642	626	10642	-626	internal_fragment	FALSE	canonical	3	133	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAATGTCAGGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	124034127	124033613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_124033817_124033999
tx.1318	chr10	+	1760	6	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15045	5	1270	-5	3prime_fragment	FALSE	canonical	3	57	junction_1	71.0070419043069	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATAAATAATCTACTGT	705	False	NA	NA	False	NA	NA	NA	127493899	127496821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
tx.13180	chr9	-	956	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	70	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCCCGGGCGCAGGC	NA	False	NA	NA	False	NA	NA	NA	124198180	124195473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr9_-_124196190_124197940
tx.13181	chr9	+	1446	12	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-696	1098	at_least_one_novel_splicesite	TRUE	canonical	3	98	junction_4	34.2887592115034	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGTGCACAGTCAGGC	NA	False	NA	NA	False	NA	NA	NA	124197232	124202494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
tx.13182	chrUn_JH584304v1	-	2431	7	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	296	junction_1	199.023170063745	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	59725	52189	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
tx.13183	chrUn_JH584304v1	-	1939	8	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_2	266.612613569362	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAACAATCTTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	59723	52193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
tx.13184	chrUn_JH584304v1	-	2544	7	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	266.626715757359	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59715	52668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
tx.13185	chrUn_JH584304v1	-	3110	6	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59715	52668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
tx.13186	chrUn_JH584304v1	-	265	2	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTGAGCAAGCAAGCCA	NA	False	NA	NA	False	NA	NA	NA	59713	58692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_JH584304v1_-_58836_59591
tx.13187	chrUn_MU069435v1	+	243	3	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	139	junction_1	109.5	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTAGCAGTTGTA	NA	False	NA	NA	False	NA	NA	NA	3309	7357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_MU069435v1_+_3351_3591_3670_7233
tx.13188	chrUn_MU069435v1	+	484	2	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	358	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTAGCAGTTGTA	NA	False	NA	NA	False	NA	NA	NA	3309	7357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_MU069435v1_+_3670_7233
tx.13189	chrUn_MU069435v1	+	491	2	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTCCAGCTATTTAT	NA	False	NA	NA	False	NA	NA	NA	14904	22056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_MU069435v1_+_15016_21676
tx.1319	chr10	+	1526	5	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15380	0	-1034	0	3prime_fragment	FALSE	canonical	3	216	junction_3	13.3229125944742	181	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATCTACTGTACACA	1040	False	NA	NA	False	NA	NA	NA	127494234	127496826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
tx.13190	chrX	+	1878	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	799	359	799	-359	multi-exon	FALSE	canonical	3	23	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTAGAAGTTACTTGGA	NA	False	NA	NA	False	NA	NA	NA	5960305	5966805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_5960459_5965080
tx.13191	chrX	-	1809	2	FSM	ENSMUSG00000073294.5	ENSMUST00000101698.4	1838	2	29	0	29	0	multi-exon	FALSE	canonical	3	19	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTTGTGGTACAA	NA	False	NA	NA	False	NA	NA	NA	5995444	5993272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_5994830_5995192
tx.13192	chrX	-	533	2	FSM	ENSMUSG00000063018.7	ENSMUST00000128571.2	540	2	11	-4	11	4	multi-exon	FALSE	canonical	3	121	junction_1	0	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGCTTATTATTCTT	NA	False	NA	NA	False	NA	NA	NA	7289216	7278337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_7278772_7289117
tx.13193	chrX	-	728	3	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	15498	-7	-6657	4	3prime_fragment	FALSE	canonical	3	36	junction_1	10.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGCTTATTATTCTT	NA	False	NA	NA	False	NA	NA	NA	7295884	7278337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_7278772_7290368_7290524_7295745
tx.13194	chrX	-	2227	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	126	0	126	0	multi-exon	FALSE	canonical	3	186	junction_12	25.3807721267498	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTTAGGCATGGATT	NA	False	NA	NA	False	NA	NA	NA	7471630	7460047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
tx.13195	chrX	+	1841	2	NNC	ENSMUSG00000031144.16	novel	2591	7	NA	NA	5312	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCGTCCCGGCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	7515459	7519490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_7515886_7518075
tx.13196	chrX	+	2195	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	101	5	101	0	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTTTATTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	7523599	7534192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
tx.13197	chrX	-	1124	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	30	3	12	-3	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	1123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATAAGTTAACTTTT	NA	False	NA	NA	False	NA	NA	NA	7537599	7534182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
tx.13198	chrX	+	3521	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	57	1	57	-1	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCATTTGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	7563426	7576500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
tx.13199	chrX	+	1502	11	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_10	63.2250741399328	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTTGACCTCAAGG	4034	False	NA	NA	False	NA	NA	NA	7588483	7594427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
tx.132	chr1	-	1255	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	-180	2566	-180	293	multi-exon	FALSE	canonical	3	220	junction_1	0	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACATAAAACAAAACAA	500	False	NA	NA	False	NA	NA	NA	52992183	52964048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_52964894_52991773
tx.1320	chr10	-	1664	6	ISM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	2155	0	926	0	3prime_fragment	FALSE	canonical	3	47	junction_1	9.57914401186244	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	NA	False	NA	NA	NA	127500424	127496786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133
tx.13200	chrX	+	1568	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	32	9	0	-4	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCAAGGGTGGGGCGT	4038	False	NA	NA	False	NA	NA	NA	7588487	7594436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
tx.13201	chrX	+	1224	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	115	0	115	0	multi-exon	FALSE	canonical	3	755	junction_2	75.5	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1285	False	NA	NA	False	NA	NA	NA	7594792	7597303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7595002_7595954_7596173_7596506
tx.13202	chrX	+	3266	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	9	2	3	-1	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGTCTCCCGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	7628905	7641439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
tx.13203	chrX	+	1420	12	NIC	ENSMUSG00000031153.17	novel	2972	24	NA	NA	-1	-5958	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	19.82110070248	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTAGTGCTCCTGCCTTT	3258	False	NA	NA	False	NA	NA	NA	7656231	7671096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598
tx.13204	chrX	+	1816	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	659	-4	-90	4	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATCAAAAAGAATATTCA	NA	False	NA	NA	False	NA	NA	NA	7708753	7741103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
tx.13205	chrX	+	2339	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	290	465	8	0	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGTGTAGCTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	7750556	7760266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
tx.13206	chrX	+	1447	5	FSM	ENSMUSG00000031156.19	ENSMUST00000115663.10	1527	5	80	0	-4	0	multi-exon	FALSE	canonical	2	4	junction_4	39.7586468582622	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTTGGAAAGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	7750562	7760703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378_7759107_7760429
tx.13207	chrX	-	495	3	ISM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	3293	-63	3210	-1	3prime_fragment	FALSE	canonical	3	539	junction_2	23	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	3879	False	NA	NA	False	NA	NA	NA	7761925	7760758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_7761107_7761403_7761468_7761842
tx.13208	chrX	-	1199	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	12	-63	12	-1	multi-exon	FALSE	canonical	3	349	junction_6	78.4950458450864	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	598	False	NA	NA	False	NA	NA	NA	7765206	7760758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
tx.13209	chrX	-	1094	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	9	1	9	-1	multi-exon	FALSE	canonical	3	139	junction_6	154.654902569847	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	305	False	NA	NA	False	NA	NA	NA	7765499	7760758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
tx.1321	chr10	-	1475	5	ISM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	2074	-1	923	0	3prime_fragment	FALSE	canonical	3	27	junction_1	18.389874931603	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	NA	False	NA	NA	NA	127500427	127496786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133
tx.13210	chrX	+	897	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	0	1484	0	-103	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	731	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1189	False	NA	NA	False	NA	NA	NA	7765595	7773106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
tx.13211	chrX	+	562	2	ISM	ENSMUSG00000039278.11	ENSMUST00000041096.4	2193	3	2459	1175	2459	-1175	3prime_fragment	FALSE	canonical	3	96	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGTCTGAGCGCCCT	NA	False	NA	NA	False	NA	NA	NA	7788519	7789474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_7788754_7789146
tx.13212	chrX	-	988	2	FSM	ENSMUSG00000031160.5	ENSMUST00000033500.5	1077	2	86	3	86	-3	multi-exon	FALSE	canonical	3	21	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAAATCTTTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	7794760	7790517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_7791453_7794707
tx.13213	chrX	-	3966	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	99	4	-23	0	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAAGTGCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	7814029	7796362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
tx.13214	chrX	-	672	4	FSM	ENSMUSG00000031163.3	ENSMUST00000033503.3	673	4	-2	3	-2	-3	multi-exon	FALSE	canonical	2	4	junction_3	18.5472369909914	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCCTCACTCTTGGCA	NA	False	NA	NA	False	NA	NA	NA	7884733	7870441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_7870742_7871941_7872098_7881456_7881595_7884655
tx.13215	chrX	-	954	4	NNC	ENSMUSG00000031163.3	novel	673	4	NA	NA	2658	-5	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	9.28559218478941	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTCCTCACTCTTGG	NA	False	NA	NA	False	NA	NA	NA	7882073	7870443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_7870742_7871941_7872098_7881456_7881595_7881711
tx.13216	chrX	+	1183	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-3	-3	-3	0	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	7917826	7939198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
tx.13217	chrX	+	1112	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	7917826	7939198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_7917897_7936874_7937304_7938585
tx.13218	chrX	-	2700	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	162	254	23	1	multi-exon	FALSE	canonical	3	87	junction_5	11.3947356265953	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGGAGATTGAGGTCT	7015	False	NA	NA	False	NA	NA	NA	7940837	7927663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
tx.13219	chrX	-	1157	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	73	-5	-3	-2	multi-exon	FALSE	canonical	3	529	junction_2	255.122192945524	273	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATAATGCTTTT	6558	False	NA	NA	False	NA	NA	NA	8011939	8008601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
tx.1322	chr10	-	2598	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	-16	0	-16	0	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	NA	False	NA	NA	NA	127502595	127496786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
tx.13220	chrX	-	1168	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	166	4	8	-2	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	529	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATAATGCTTTT	6544	False	NA	NA	False	NA	NA	NA	8011953	8008601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
tx.13221	chrX	-	2385	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	257	6	-33	5	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTATGTGTATTTCTC	NA	False	NA	NA	False	NA	NA	NA	8042163	8020716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
tx.13222	chrX	-	1121	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	620	2	6	0	multi-exon	FALSE	canonical	3	751	junction_2	18.0190871022924	724	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	NA	False	NA	NA	NA	8059131	8051569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
tx.13223	chrX	-	1853	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	-12	-2	0	0	multi-exon	TRUE	canonical	3	57	junction_2	6.61857655055493	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGGTTTTTTGGTTTTT	1976	False	NA	NA	False	NA	NA	NA	8072752	8060086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
tx.13224	chrX	-	1654	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	2	0	2	0	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	NA	False	NA	NA	NA	8118632	8106658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
tx.13225	chrX	+	853	2	Genic_Genomic	ENSMUSG00000072249.4	novel	847	1	NA	NA	-19452	-5	multi-exon	TRUE	canonical	3	217	junction_1	0	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTATCAAATTGATGC	NA	False	NA	NA	False	NA	NA	NA	8909801	8930095	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_+_8909865_8929305
tx.13226	chrX	-	1138	2	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTGGTTGCGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	9198874	9195213	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_-_9196165_9198687
tx.13227	chrX	-	2113	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	63	0	63	0	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTCTGGTTGATCC	NA	False	NA	NA	False	NA	NA	NA	9529179	9520505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
tx.13228	chrX	-	2694	17	FSM	ENSMUSG00000031174.18	ENSMUST00000115533.8	2739	17	198	-153	11	-3	multi-exon	FALSE	canonical	3	37	junction_1	23.3939595569027	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	10082961	10024457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_10025089_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
tx.13229	chrX	-	2733	17	FSM	ENSMUSG00000031174.18	ENSMUST00000073392.11	2926	17	190	3	3	-3	multi-exon	FALSE	canonical	3	77	junction_1	17.609368067878	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	10082969	10024457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
tx.1323	chr10	+	1911	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	-14	4105	-12	4	multi-exon	TRUE	canonical	3	115	junction_7	22.4499443206436	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCATGTTCTTTACCC	NA	False	NA	NA	False	NA	NA	NA	127512920	127532813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
tx.13230	chrX	-	3382	16	ISM	ENSMUSG00000031174.18	ENSMUST00000115533.8	2739	17	174	2935	12	-699	5prime_fragment	FALSE	canonical	3	85	junction_6	16.4996969669143	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGTATTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	10082985	10027545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
tx.13231	chrX	+	1772	8	FSM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	-40	1	-40	-1	multi-exon	FALSE	canonical	3	58	junction_5	9.20736173961258	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGGTTTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	10351356	10462843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
tx.13232	chrX	+	1912	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	117	-10	39	10	multi-exon	FALSE	canonical	3	265	junction_1	0	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTGTGTGTTGCTCTT	1596	False	NA	NA	False	NA	NA	NA	10583745	10585939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_10583944_10584225
tx.13233	chrX	+	1836	2	FSM	ENSMUSG00000008035.13	ENSMUST00000115524.8	2022	2	196	-10	118	10	multi-exon	FALSE	canonical	3	75	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTGTGTGTTGCTCTT	1675	False	NA	NA	False	NA	NA	NA	10583824	10585939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_10583944_10584222
tx.13234	chrX	-	2280	7	ISM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	32833	2	32833	1	3prime_fragment	FALSE	canonical	3	150	junction_3	14.7129950119689	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	NA	False	NA	NA	NA	11913959	11902980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661
tx.13235	chrX	+	2042	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	-23	305	-23	-305	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	511	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCACTGCAATTCTG	NA	False	NA	NA	False	NA	NA	NA	12454016	12482983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
tx.13236	chrX	+	1681	7	ISM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	8429	303	8429	-303	3prime_fragment	FALSE	canonical	3	980	junction_1	69.2042066801016	289	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCACTGCAATTCTGAA	NA	False	NA	NA	False	NA	NA	NA	12462468	12482985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
tx.13237	chrX	-	2618	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	81	0	81	0	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	NA	False	NA	NA	NA	12539826	12521117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
tx.13238	chrX	+	2235	11	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	84813	3610	-4530	-180	3prime_fragment	FALSE	canonical	3	1026	junction_7	67.7468818470636	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	NA	False	NA	NA	False	NA	NA	NA	13022565	13035957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
tx.13239	chrX	+	4571	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	52	69	0	-69	multi-exon	TRUE	canonical	3	179	junction_1	98.1322449554681	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTCCTTTGTTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	13147260	13160222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
tx.1324	chr10	+	1758	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	-5	4	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	43.8461443572864	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCATGTTCTTTACCC	NA	False	NA	NA	False	NA	NA	NA	127512927	127532813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
tx.13240	chrX	+	1511	3	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	9930	1424	3115	606	3prime_fragment	FALSE	canonical	3	424	junction_1	48	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAAATGGCTCCAGAA	NA	False	NA	NA	False	NA	NA	NA	13157138	13158867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_13157294_13157401_13157542_13157651
tx.13241	chrX	+	2695	2	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	10214	64	3399	-64	3prime_fragment	FALSE	canonical	3	520	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTTGTTGTCAATTG	NA	False	NA	NA	False	NA	NA	NA	13157422	13160227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_13157542_13157651
tx.13242	chrX	+	1977	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	116	2074	116	-2074	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTAGCATCCAATG	NA	False	NA	NA	False	NA	NA	NA	16486052	16551983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
tx.13243	chrX	+	1743	13	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	19405	2074	19405	-2074	3prime_fragment	FALSE	canonical	3	197	junction_5	24.4487843369677	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTAGCATCCAATG	NA	False	NA	NA	False	NA	NA	NA	16505341	16551983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
tx.13244	chrX	+	1051	8	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	46058	2074	46058	-2074	3prime_fragment	FALSE	canonical	3	240	junction_3	19.8761471238718	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTAGCATCCAATG	9076	False	NA	NA	False	NA	NA	NA	16531994	16551983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
tx.13245	chrX	-	2281	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68062	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_13	14.945265027612	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGACCATTTTATTGTA	NA	False	NA	NA	False	NA	NA	NA	17117545	16998287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
tx.13246	chrX	-	1864	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	119	0	47	0	multi-exon	TRUE	canonical	3	209	junction_3	21.435951110226	131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	False	NA	NA	False	NA	NA	NA	17438445	17422802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
tx.13247	chrX	+	3611	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	78	728	0	-728	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGCTACTTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	20230797	20266364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
tx.13248	chrX	+	4778	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	88	0	-12	0	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	NA	False	NA	NA	NA	20292014	20386178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
tx.13249	chrX	+	3395	3	ISM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	50641	-2043	50641	0	3prime_fragment	FALSE	canonical	3	148	junction_2	8	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	NA	False	NA	NA	NA	20377406	20386178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_20377730_20378974_20379093_20383224
tx.1325	chr10	+	712	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	-47	0	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_5	3.96988664825584	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGATGCAATAGGCTG	NA	False	NA	NA	False	NA	NA	NA	127563668	127567637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
tx.13250	chrX	-	856	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	52	0	52	0	multi-exon	FALSE	canonical	3	2198	junction_1	70	1139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	20483806	20481564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_20481782_20481952_20482084_20483298
tx.13251	chrX	+	3161	23	FSM	ENSMUSG00000031060.17	ENSMUST00000084383.10	3172	23	-1	12	-1	1	multi-exon	TRUE	canonical	3	151	junction_9	72.7799809002085	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	554	False	NA	NA	False	NA	NA	NA	20484020	20517128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
tx.13252	chrX	+	3158	23	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	194	junction_9	67.1727297333874	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	554	False	NA	NA	False	NA	NA	NA	20484020	20517128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
tx.13253	chrX	+	3477	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	94	473	-1	-473	multi-exon	TRUE	canonical	3	1167	junction_1	494.469940036804	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCATCCTGGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	20524658	20548945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
tx.13254	chrX	+	3574	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	24	473	24	-473	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCATCCTGGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	20529160	20548945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
tx.13255	chrX	+	2826	21	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	7368	475	7368	-475	3prime_fragment	FALSE	canonical	3	2742	junction_3	326.725328066252	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	20536504	20548943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
tx.13256	chrX	+	2139	16	NIC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	6	-913	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	416.044580944559	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGATGTGTCTGTC	1866	False	NA	NA	False	NA	NA	NA	20554198	20565125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
tx.13257	chrX	+	2672	15	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	4960	5	-905	-5	3prime_fragment	FALSE	canonical	3	1538	junction_14	86.1898710844321	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTCTGGTTATAAATC	2053	False	NA	NA	False	NA	NA	NA	20559616	20566114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
tx.13258	chrX	+	3463	21	FSM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	3	1	3	1	multi-exon	FALSE	canonical	3	183	junction_13	34.5694590643244	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTAGCTGTTTTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	20570147	20586777	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
tx.1326	chr10	+	1555	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	22	6	-2	-2	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	875	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTGATGTGCTCGGTT	1006	False	NA	NA	False	NA	NA	NA	127851062	127865900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
tx.13260	chrX	+	1554	6	ISM	ENSMUSG00000001127.13	ENSMUST00000136451.8	2439	17	-6	7606	-6	2	5prime_fragment	TRUE	canonical	3	74	junction_1	119.456100723236	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCTCCAACTATCTTT	1117	False	NA	NA	False	NA	NA	NA	20664046	20719130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
tx.13261	chrX	+	1528	6	FSM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	-6	-2	-3	2	multi-exon	FALSE	canonical	3	219	junction_1	64.9935381403413	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCTCCAACTATCTTT	6302	False	NA	NA	False	NA	NA	NA	20714810	20719130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
tx.13262	chrX	+	883	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	-48	-2	7	2	multi-exon	FALSE	canonical	3	257	junction_1	211.264384125673	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTATAGTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	20736411	20740976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
tx.13263	chrX	+	868	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	15	0	15	0	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	NA	False	NA	NA	NA	20736419	20740972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
tx.13264	chrX	-	531	3	ISM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	3831	77	-110	-77	3prime_fragment	FALSE	canonical	3	117	junction_2	8	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTAAGATTCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	20793963	20791769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_20791999_20793519_20793632_20793773
tx.13265	chrX	-	1554	9	FSM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	4	78	4	-78	multi-exon	FALSE	canonical	3	58	junction_8	23.4837044564949	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTAAGATTCTGTAA	NA	False	NA	NA	False	NA	NA	NA	20797790	20791770	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
tx.13266	chrX	-	2787	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	0	761	0	-761	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTATTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	20816847	20800394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
tx.13267	chrX	-	470	6	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	227.721760049408	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	20828220	20818161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_20818263_20818446_20818511_20825973_20826042_20826176_20826259_20827918_20828026_20828172
tx.13268	chrX	-	588	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	26	261	0	0	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	20828230	20818161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
tx.13269	chrX	+	1053	5	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-2	612	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	30.3016088681773	17	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGGTCATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	20828350	20853588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852217_20852400_20853321
tx.1327	chr10	+	858	8	FSM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	27	0	27	0	multi-exon	FALSE	canonical	3	9741	junction_1	845.476607528293	6843	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGGTGCTAGATCTT	4939	False	NA	NA	False	NA	NA	NA	127871470	127884502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
tx.13270	chrX	+	1040	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	0	612	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_3	26.8048503073604	23	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGGTCATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	20828352	20853588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852228_20852400_20853321
tx.13271	chrX	-	3170	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	-6	-4	-6	0	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTCCTTTAATGGT	3230	False	NA	NA	False	NA	NA	NA	20928297	20895177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
tx.13272	chrX	-	3221	8	ISM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	3387	14	3358	0	3prime_fragment	TRUE	canonical	3	772	junction_6	153.107671864193	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	NA	False	NA	NA	NA	23227934	23085523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732
tx.13273	chrX	-	3225	9	FSM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	12	14	12	0	multi-exon	FALSE	canonical	3	241	junction_8	283.721694623446	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	NA	False	NA	NA	NA	23231309	23085523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732_23227824_23231194
tx.13274	chrX	-	930	6	NNC	ENSMUSG00000095887.8	novel	639	8	NA	NA	7939	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.2	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGAGTTTGAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	28725558	28712222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_28712411_28712729_28712829_28715278_28715361_28723560_28723625_28723933_28724060_28725187
tx.13275	chrX	+	619	6	NNC	ENSMUSG00000073257.4	novel	874	9	NA	NA	9527	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.8262252939418	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTCTCCTATGAAACA	NA	False	NA	NA	False	NA	NA	NA	29734959	29748283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_29735034_29736460_29736587_29736895_29736960_29745161_29745244_29747691_29747791_29748109
tx.13276	chrX	+	3741	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	-32	3	-32	-3	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGCTTTTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	35375730	35434909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
tx.13277	chrX	+	1857	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	42	533	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGAGGCTTTCATTTT	1668	False	NA	NA	False	NA	NA	NA	35861858	35869732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_35862268_35865773_35865930_35868440
tx.13278	chrX	-	587	3	ISM	ENSMUSG00000059708.13	ENSMUST00000133980.2	1370	6	-307	6724	-8	-6724	5prime_fragment	FALSE	canonical	3	34	junction_1	5.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGGCTGAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	35909056	35882255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_35882387_35900125_35900228_35908702
tx.13279	chrX	+	1205	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	-64	-30	-64	30	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAGCAATCATAGATGAA	NA	False	NA	NA	False	NA	NA	NA	36007247	36040885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
tx.1328	chr10	+	1927	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	53	20	-4	-20	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	1129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTCACTCCTGAA	899	False	NA	NA	False	NA	NA	NA	127894875	127913121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
tx.13280	chrX	+	1243	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	11014	junction_3	650.055895032625	1948	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTCGTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	36059300	36062460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
tx.13281	chrX	-	1262	7	NIC	ENSMUSG00000006423.16	novel	678	3	NA	NA	18	8974	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	75.5389891968968	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTTTTTGCTTCGTCA	NA	False	NA	NA	False	NA	NA	NA	36127873	36078415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_36078984_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
tx.13282	chrX	-	936	2	Antisense	novelGene_ENSMUSG00000084990.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTTTTTGCTTCGTCA	NA	False	NA	NA	False	NA	NA	NA	36080746	36078415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chrX_-_36078984_36080378
tx.13283	chrX	-	3283	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	57	0	-16	0	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGTTTTGATCATTT	NA	False	NA	NA	False	NA	NA	NA	36127842	36112195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
tx.13284	chrX	+	723	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	44	965	-2	2	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	534	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCTTCCCTTGGCAA	NA	False	NA	NA	False	NA	NA	NA	36137991	36146910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
tx.13285	chrX	-	2088	10	NIC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-11	-801	combination_of_known_splicesites	TRUE	canonical	3	21	junction_1	11.2940495640649	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	NA	NA	NA	36253155	36179484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
tx.13286	chrX	-	2159	10	NNC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	56	-801	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	16.9538225414044	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	NA	NA	NA	36253253	36179484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
tx.13287	chrX	-	360	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	217	35	-19	-35	multi-exon	FALSE	canonical	3	12849	junction_1	35	12867	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTCTGGTTTATAAAG	NA	False	NA	NA	False	NA	NA	NA	36348838	36346207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_36346403_36347637_36347742_36348777
tx.13288	chrX	-	1257	2	ISM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	14528	0	8729	0	3prime_fragment	FALSE	canonical	3	274	junction_1	0	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	NA	False	NA	NA	NA	36359447	36355330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_36356315_36359174
tx.13289	chrX	-	2341	10	FSM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	3	0	3	0	multi-exon	FALSE	canonical	3	68	junction_3	69.0213779729436	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	NA	False	NA	NA	NA	36373972	36355330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_36356315_36359174_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
tx.1329	chr10	+	1765	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	33	118	0	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	7660	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	NA	False	NA	NA	NA	127919174	127926142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
tx.13290	chrX	-	2383	11	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_3	55.9360348970143	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	NA	False	NA	NA	NA	36373975	36355330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
tx.13291	chrX	-	1343	10	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	9	107	combination_of_known_junctions	FALSE	canonical	3	132	junction_2	56.9368287590361	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAAAAAAGAGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	36373966	36359221	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
tx.13292	chrX	+	938	5	ISM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-7	11013	-7	-2136	5prime_fragment	FALSE	canonical	3	360	junction_3	30.7520324531567	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGGGTCAGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	36390440	36403386	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329
tx.13293	chrX	+	2531	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-7	1706	-7	-1706	multi-exon	TRUE	canonical	3	360	junction_3	33.4381425171914	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACCAGATTTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	36390440	36412693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
tx.13294	chrX	-	419	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	0	0	0	0	multi-exon	FALSE	canonical	3	2951	junction_1	110	1092	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTTATTTTTATGAA	2312	False	NA	NA	False	NA	NA	NA	36454816	36451240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_36451395_36453526_36453617_36454641
tx.13295	chrX	-	918	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	-9	-92	-9	92	multi-exon	TRUE	canonical	3	60	junction_3	3.74165738677394	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAAGATATCTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	36474703	36472908	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
tx.13296	chrX	-	821	4	ISM	ENSMUSG00000071773.5	ENSMUST00000115210.2	883	5	3927	-15	3927	15	3prime_fragment	FALSE	canonical	3	106	junction_3	6.34209919681348	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTATTCATGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	36481984	36477441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_36477701_36479202_36479249_36481305_36481649_36481811
tx.13297	chrX	+	864	5	FSM	ENSMUSG00000051827.12	ENSMUST00000173650.2	735	5	-36	-93	-14	6	multi-exon	FALSE	canonical	1	4	junction_3	65.4618209340376	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	36508614	36513345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36508740_36508901_36509314_36510828_36510875_36511141_36511191_36513113
tx.13298	chrX	+	809	4	FSM	ENSMUSG00000051827.12	ENSMUST00000063340.12	795	4	-8	-6	-8	6	multi-exon	FALSE	canonical	3	47	junction_3	56.8174464598878	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	36508620	36513345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36508740_36508901_36509314_36510828_36510875_36513113
tx.13299	chrX	+	798	4	FSM	ENSMUSG00000095698.3	ENSMUST00000115179.4	685	4	-22	-91	-22	91	multi-exon	FALSE	canonical	3	16	junction_2	8.9938250421547	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTTTTGTGCTTCT	6867	False	NA	NA	False	NA	NA	NA	36675058	36679367	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36675169_36675331_36675744_36677299_36677346_36679137
tx.133	chr1	-	946	2	FSM	ENSMUSG00000043629.13	ENSMUST00000114492.8	3565	2	52	2567	52	292	multi-exon	FALSE	canonical	3	11	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAACATAAAACAAAACA	226	False	NA	NA	False	NA	NA	NA	52992457	52964049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_52964894_52992355
tx.1330	chr10	+	2492	13	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	488	6	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	39.5561310039291	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGGTAAAAGCGA	NA	False	NA	NA	False	NA	NA	NA	127932736	127955200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138
tx.13300	chrX	+	815	4	FSM	ENSMUSG00000096788.9	ENSMUST00000072167.10	799	4	-14	-2	-14	2	multi-exon	FALSE	canonical	3	15	junction_3	24.1246761636296	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	36712090	36723468	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36723236
tx.13301	chrX	+	720	4	NNC	ENSMUSG00000096788.9	novel	799	4	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_3	23.6690139681023	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	36712102	36723468	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_36712216_36712377_36712790_36720942_36720989_36723319
tx.13302	chrX	-	1299	3	ISM	ENSMUSG00000079629.6	ENSMUST00000115169.4	795	4	-336	-6	-336	4	intron_retention	FALSE	canonical	2	5	junction_2	5.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	36825459	36820763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_36820996_36822809_36822856_36824438
tx.13303	chrX	-	979	4	FSM	ENSMUSG00000079628.4	ENSMUST00000115166.3	979	4	-6	6	-6	-6	multi-exon	FALSE	canonical	3	17	junction_1	1.24721912892465	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTCATGTGTCTTTT	6362	False	NA	NA	False	NA	NA	NA	36832986	36828158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_36828390_36829677_36829724_36832090_36832497_36832690
tx.13304	chrX	+	882	6	FSM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	11	0	11	0	multi-exon	FALSE	canonical	3	2792	junction_1	493.533626007388	1526	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTGATTCGAGTAA	8516	False	NA	NA	False	NA	NA	NA	36891646	36897308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
tx.13305	chrX	+	931	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	77	2	77	-2	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGGCTCCATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	36915863	36918732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
tx.13307	chrX	-	932	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	-48	-2	-48	2	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCATTATCTTGG	1030	False	NA	NA	False	NA	NA	NA	36990695	36987971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
tx.13308	chrX	+	920	3	FSM	ENSMUSG00000050197.6	ENSMUST00000152730.4	876	3	-40	-4	-40	4	multi-exon	FALSE	canonical	3	73	junction_1	2	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTTTATGTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	37210055	37218848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_37210700_37211950_37211997_37218618
tx.13309	chrX	-	1744	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	26	-1	-14	1	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTTCAATTTGTAAC	NA	False	NA	NA	False	NA	NA	NA	37545305	37493937	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
tx.1331	chr10	-	1161	12	ISM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	25193	121	-7557	96	3prime_fragment	FALSE	canonical	3	274	junction_9	22.0866063898052	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTTCTTGCTTTGTATT	4120	False	NA	NA	False	NA	NA	NA	127987155	127969096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051
tx.13310	chrX	-	3576	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	33	-5	-7	5	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCACATTTTTTCCCA	NA	False	NA	NA	False	NA	NA	NA	37545298	37508378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
tx.13312	chrX	-	750	2	ISM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	-3	38516	-3	-38216	5prime_fragment	FALSE	canonical	3	600	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCAGCATGCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	37665076	37660666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_37661356_37665015
tx.13313	chrX	+	893	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-12	-98	-12	98	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	NA	False	NA	NA	NA	37689519	37702401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
tx.13314	chrX	+	1485	6	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	15	98	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	233.438985604376	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	NA	False	NA	NA	NA	37689546	37702401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
tx.13315	chrX	-	1482	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	-39	6	-39	-6	multi-exon	FALSE	canonical	3	94	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGTTTCTATTACTT	NA	False	NA	NA	False	NA	NA	NA	37724003	37719667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_37721001_37723854
tx.13316	chrX	-	2783	23	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	4	32192	4	-3775	5prime_fragment	FALSE	canonical	3	149	junction_4	23.7647300993345	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTGATGTAGCGAT	NA	False	NA	NA	False	NA	NA	NA	41000774	40916059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
tx.13317	chrX	-	3484	2	FSM	ENSMUSG00000045284.10	ENSMUST00000060481.9	3509	2	29	-4	-7	4	multi-exon	FALSE	canonical	3	37	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTTTTTCTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	43879045	43875442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_43877171_43877289
tx.13319	chrX	+	3227	21	FSM	ENSMUSG00000037005.17	ENSMUST00000077775.11	3498	21	-38	309	-38	2	multi-exon	TRUE	canonical	3	24	junction_11	7.3109506905737	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTGGGCAGACTCTG	NA	False	NA	NA	False	NA	NA	NA	47197563	47225549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
tx.1332	chr10	-	1515	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-155	121	-155	96	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTTCTTGCTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	128012503	127969096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
tx.13321	chrX	+	2510	15	FSM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	-6	3	-6	-3	multi-exon	FALSE	canonical	3	320	junction_8	49.1840047833705	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	47345732	47371327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
tx.13322	chrX	-	2126	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	111	0	-26	0	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	161	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	47602329	47563820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
tx.13323	chrX	+	1044	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	116	-2	116	2	multi-exon	FALSE	canonical	3	18	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGCTTTGTGTCTTGC	NA	False	NA	NA	False	NA	NA	NA	47608277	47619111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_47608736_47618525
tx.13324	chrX	+	1350	10	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	17.3254968040219	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	47712628	47751171	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
tx.13325	chrX	+	753	4	ISM	ENSMUSG00000031105.17	ENSMUST00000177710.2	1516	10	27970	-3	27970	1	3prime_fragment	FALSE	canonical	3	86	junction_1	6.84754619472471	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGACTTTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	47740808	47751172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_47740932_47742243_47742380_47749565_47749647_47750759
tx.13326	chrX	+	567	5	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	32	1650	32	7	5prime_fragment	FALSE	canonical	3	254	junction_1	56.9753236059261	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCATATTAAAACTCAGG	NA	False	NA	NA	False	NA	NA	NA	47783912	47797950	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766
tx.13327	chrX	+	1703	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	44	0	44	0	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	False	NA	NA	False	NA	NA	NA	47783924	47799600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
tx.13328	chrX	-	3171	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114914.8	3936	16	-42	807	5	-56	multi-exon	FALSE	canonical	2	12	junction_14	13.255774423079	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTGGGCTGTGAGGC	NA	False	NA	NA	False	NA	NA	NA	48377131	48099390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
tx.13329	chrX	-	992	6	NIC	ENSMUSG00000031109.17	novel	968	6	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	22.3910696484112	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGACAAACCAACTGAGT	NA	False	NA	NA	False	NA	NA	NA	48377129	48154321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_48154678_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
tx.1333	chr10	-	1594	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	-11	0	-11	0	multi-exon	FALSE	canonical	3	299	junction_1	0	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTGTCTATAAAATTGC	NA	False	NA	NA	False	NA	NA	NA	128047687	128045776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128047261_128047577
tx.13330	chrX	+	3331	12	FSM	ENSMUSG00000031112.11	ENSMUST00000033444.11	3639	12	309	-1	-85	1	multi-exon	TRUE	canonical	3	20	junction_11	5.29618605950164	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCGATGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	49930232	49981975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_49930424_49930555_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
tx.13331	chrX	-	3211	3	FSM	ENSMUSG00000050029.8	ENSMUST00000053593.8	3545	3	-42	376	-42	-376	multi-exon	FALSE	canonical	3	105	junction_1	4	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTGTCTCTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	50106937	50093164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_50095628_50103847_50104161_50106502
tx.13332	chrX	-	2205	8	FSM	ENSMUSG00000036109.18	ENSMUST00000114876.9	2243	8	38	0	38	0	multi-exon	FALSE	canonical	3	6	junction_7	7.54848275064166	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGAGTAGCCATTACATT	NA	False	NA	NA	False	NA	NA	NA	50294829	50208956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50253294_50253542_50294650
tx.13333	chrX	-	1252	8	FSM	ENSMUSG00000055780.11	ENSMUST00000069509.4	4120	8	62	2806	62	-2806	multi-exon	FALSE	canonical	3	16	junction_1	4.17475405605784	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAAGAAAGGAATGTAA	NA	False	NA	NA	False	NA	NA	NA	50889959	50845641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
tx.13334	chrX	-	1401	4	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	3	60	junction_2	10.4029910228848	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGCTCCGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	51061667	51057570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_51058747_51059091_51059163_51059858_51059953_51061607
tx.13335	chrX	-	2794	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-131	-12	-131	12	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTTATCCCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	51254260	51141885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
tx.13336	chrX	-	2268	8	FSM	ENSMUSG00000055653.14	ENSMUST00000069360.14	2216	8	-52	0	-23	0	multi-exon	FALSE	canonical	3	233	junction_6	17.9398086582293	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGGTCCTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	51702850	51361302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_51361832_51403713_51403874_51454598_51454720_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
tx.13337	chrX	+	1532	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	10	-6	10	6	multi-exon	FALSE	canonical	3	142	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGTGATTCTTGAAA	NA	False	NA	NA	False	NA	NA	NA	51880086	51888351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_51880203_51886935
tx.13338	chrX	+	1529	2	NNC	ENSMUSG00000073207.2	novel	1536	2	NA	NA	1857	6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGTGATTCTTGAAA	NA	False	NA	NA	False	NA	NA	NA	51881933	51888351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_51882047_51886935
tx.13339	chrX	+	1421	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	-9	2938	-9	-1960	multi-exon	FALSE	canonical	3	199	junction_10	29.4423164849507	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCGACTCTTAGATCCT	NA	False	NA	NA	False	NA	NA	NA	52001133	52042882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
tx.1334	chr10	+	1741	13	ISM	ENSMUSG00000039994.16	ENSMUST00000105244.8	4341	29	-9	8023	0	899	5prime_fragment	FALSE	canonical	3	289	junction_8	43.2845879679541	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGGGCAGCCCCAAGGT	6606	False	NA	NA	False	NA	NA	NA	128067948	128080698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528
tx.13340	chrX	+	1110	9	FSM	ENSMUSG00000025626.17	ENSMUST00000154864.4	3057	9	-13	1960	-13	-1960	multi-exon	FALSE	canonical	2	8	junction_1	81.7778049045094	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCGACTCTTAGATCCT	NA	False	NA	NA	False	NA	NA	NA	52001158	52042882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_52001314_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
tx.13341	chrX	+	1326	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	818.20507882829	1412	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	NA	False	NA	NA	NA	52076982	52110537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52105200_52105307_52108981_52109029_52109199_52109277_52109943
tx.13342	chrX	-	3562	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	-28	2	-28	-2	multi-exon	FALSE	canonical	3	73	junction_3	8.54034542626936	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGATCGTAAAAGTCTGC	NA	False	NA	NA	False	NA	NA	NA	52357925	52332303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
tx.13343	chrX	-	765	8	ISM	ENSMUSG00000036022.16	ENSMUST00000143069.2	2038	10	742	9120	-43	-9120	5prime_fragment	FALSE	canonical	3	73	junction_2	9.11603207631075	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCACATTGAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	52357940	52342860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
tx.13344	chrX	-	2204	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	-21	-410	-21	0	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTCTCTCTCCGTTC	NA	False	NA	NA	False	NA	NA	NA	52459400	52433474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
tx.13345	chrX	+	1454	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-25	-2	-25	2	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTACCTGTAGTTAA	NA	False	NA	NA	False	NA	NA	NA	52726767	52740410	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
tx.13346	chrX	-	1237	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-12	-1	-12	1	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	1824	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	NA	False	NA	NA	NA	52759810	52744866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
tx.13347	chrX	-	995	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	-10	-1	0	1	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	NA	NA	NA	52799673	52785713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
tx.13348	chrX	-	1025	8	NNC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	3	47	junction_7	85.2532840949813	41	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	NA	NA	NA	52799673	52785713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798218_52799598
tx.13349	chrX	-	1047	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	-14	-1	-4	1	multi-exon	FALSE	canonical	3	95	junction_7	69.0238054173031	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	NA	NA	NA	52799677	52785713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
tx.1335	chr10	+	1772	14	ISM	ENSMUSG00000039994.16	ENSMUST00000105244.8	4341	29	-11	6738	-2	5	5prime_fragment	FALSE	canonical	3	289	junction_8	41.9153839095388	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTTCAGGACCAGGGTG	6604	False	NA	NA	False	NA	NA	NA	128067946	128081983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954
tx.13350	chrX	+	921	7	NIC	ENSMUSG00000031125.3	novel	1022	8	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	19.6864307469779	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAAATAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	55181906	55198858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_55181986_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
tx.13351	chrX	+	1043	8	FSM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	19	junction_1	16.2819544532076	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAAATAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	55181910	55198858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
tx.13352	chrX	+	2424	2	FSM	ENSMUSG00000054850.5	ENSMUST00000068106.5	2393	2	-31	0	-31	0	multi-exon	FALSE	canonical	3	59	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCCTGGCTGCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	55419914	55423159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_55420569_55421389
tx.13353	chrX	-	4112	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	124	-2	124	2	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTGGTAGTGGGT	NA	False	NA	NA	False	NA	NA	NA	55643305	55630869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
tx.13354	chrX	+	4439	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-3	3	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	37.5097903886439	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTCACTGTTATTTG	NA	False	NA	NA	False	NA	NA	NA	55655131	55709192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
tx.13355	chrX	+	2374	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	-21	3	-21	3	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCTCCTGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	55777125	55838703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
tx.13356	chrX	-	2910	16	FSM	ENSMUSG00000067878.14	ENSMUST00000114766.8	2891	16	-19	0	-19	0	multi-exon	FALSE	canonical	2	2	junction_7	2.18682926224756	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTTGTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	55867705	55843217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_55843463_55844649_55845030_55846362_55846553_55847120_55847203_55849725_55849831_55850759_55850905_55853203_55853331_55854977_55855151_55855397_55855526_55856222_55856912_55858674_55858768_55860884_55860994_55862635_55862800_55864035_55864114_55864203_55864297_55867596
tx.13357	chrX	+	1027	5	ISM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	291	-2	-24	2	3prime_fragment	FALSE	canonical	3	35	junction_4	215.852380111964	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTGGCTCACTTATGT	NA	False	NA	NA	False	NA	NA	NA	56099233	56102568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56102250
tx.13358	chrX	+	2739	9	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	259	0	-24	0	3prime_fragment	FALSE	canonical	3	455	junction_5	31.3996417177012	47	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	NA	False	NA	NA	NA	56099233	56112543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
tx.13359	chrX	-	2347	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	-26	-182	13	182	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTTGGGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	56438367	56428707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
tx.1336	chr10	+	4440	29	FSM	ENSMUSG00000039994.16	ENSMUST00000055539.11	4457	29	15	2	0	0	multi-exon	FALSE	canonical	3	249	junction_23	47.0561431934758	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6606	False	NA	NA	False	NA	NA	NA	128067948	128088808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
tx.13360	chrX	-	2073	9	NIC	ENSMUSG00000031134.17	novel	2108	9	NA	NA	0	19	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	19.0028780714922	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCTCTTACTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	56438341	56431698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
tx.13361	chrX	+	2162	17	FSM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	0	-6	0	6	multi-exon	FALSE	canonical	1	199	junction_7	106.775300719548	393	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTCTGGCCTCAGT	NA	False	NA	NA	False	NA	NA	NA	56454513	56534133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
tx.13362	chrX	+	3660	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	288	1	-68	-1	multi-exon	FALSE	canonical	3	194	junction_2	9.5	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTTATAACTTTTTTT	9788	False	NA	NA	False	NA	NA	NA	57076290	57081918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_57077598_57078721_57078886_57079729
tx.13363	chrX	+	1570	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	6	-4	6	4	multi-exon	FALSE	canonical	3	101	junction_1	0	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCAGTGTTTGTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	57956826	57965668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_57956922_57964193
tx.13364	chrX	-	1631	2	ISM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	66936	-6	65662	6	3prime_fragment	FALSE	canonical	3	77	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAATGTGTGTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	58112860	58107498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_58109030_58112760
tx.13365	chrX	-	2533	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-34	0	-34	0	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACTTCAATGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	58179830	58107504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
tx.13366	chrX	-	3812	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	828	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	NA	False	NA	NA	NA	59223621	59101315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
tx.13367	chrX	-	4305	28	FSM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-78	0	-78	0	multi-exon	FALSE	canonical	3	390	junction_27	54.2283947104	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	NA	False	NA	NA	NA	59224527	59101315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
tx.13368	chrX	-	2738	15	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	828	-56486	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_14	93.2665972536004	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	59223621	59157804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
tx.13369	chrX	+	2094	3	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGTTTCTTTGATTT	NA	False	NA	NA	False	NA	NA	NA	61223367	61226030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_+_61223520_61223860_61223947_61224174
tx.1337	chr10	-	1433	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	-74	1	-74	-1	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGGTCTAAATTTCTA	NA	False	NA	NA	False	NA	NA	NA	128134027	128132008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
tx.13370	chrX	+	1934	4	FSM	ENSMUSG00000045330.9	ENSMUST00000051414.2	1970	4	37	-1	37	1	multi-exon	FALSE	canonical	1	3	junction_2	2.62466929133727	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATCTTTTCTGTTTGGA	NA	False	NA	NA	False	NA	NA	NA	61330784	61335685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_61330842_61332956_61333046_61333767_61333841_61333970
tx.13371	chrX	-	723	3	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-4862	7	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	14.5	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTGATTTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	61564537	61554137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_61554605_61558040_61558144_61564384
tx.13372	chrX	-	634	3	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-26400	3	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	22.5	11	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATATGAGTTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	61597017	61554141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_61554605_61558040_61558144_61596949
tx.13373	chrX	-	632	3	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-27892	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	26.5	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATATGAGTTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	61598509	61554141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_61554605_61558040_61558144_61598443
tx.13374	chrX	+	931	3	FSM	ENSMUSG00000031181.3	ENSMUST00000033524.3	854	3	-77	0	-77	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGAGTTACTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	64091172	64092620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_64091683_64092028_64092158_64092328
tx.13375	chrX	-	1669	9	NNC	ENSMUSG00000079578.2	novel	782	8	NA	NA	-876	716	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_8	9.82264602843857	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGAAATTATCAAATTA	NA	False	NA	NA	False	NA	NA	NA	66738044	66725789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_66726652_66726758_66726864_66732572_66732672_66733445_66733546_66734431_66734550_66736337_66736373_66736521_66736592_66737059_66737213_66737917
tx.13376	chrX	-	1669	9	NNC	ENSMUSG00000079578.2	novel	782	8	NA	NA	-906	686	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_8	9.82264602843857	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTCAATTAAATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	66738074	66725819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_66726652_66726758_66726864_66732572_66732672_66733445_66733546_66734431_66734550_66736337_66736373_66736521_66736592_66737059_66737213_66737917
tx.13377	chrX	+	2542	3	ISM	ENSMUSG00000000838.18	ENSMUST00000114653.2	4058	17	33537	0	503	0	3prime_fragment	FALSE	canonical	3	826	junction_1	32	71	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	NA	False	NA	NA	NA	67755959	67761569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_67756020_67756846_67756930_67759170
tx.13378	chrX	+	778	5	FSM	ENSMUSG00000062170.13	ENSMUST00000069731.12	799	5	15	6	15	-6	multi-exon	FALSE	canonical	3	455	junction_2	146.787899705664	786	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	67805459	67848167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_67805838_67807537_67807616_67815650_67815748_67847210_67847300_67848031
tx.13379	chrX	+	700	4	FSM	ENSMUSG00000062170.13	ENSMUST00000114647.8	679	4	-27	6	15	-6	multi-exon	FALSE	canonical	3	331	junction_1	201.191451110627	496	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTGGATTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	67805459	67848167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_67805838_67815650_67815748_67847210_67847300_67848031
tx.1338	chr10	+	961	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	56	366	1	0	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	1075	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTGTTGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	128158383	128163056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
tx.13380	chrX	+	1094	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	1.5	188	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	False	NA	NA	False	NA	NA	NA	69429482	69433023	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_69429758_69431499_69431773_69432477
tx.13381	chrX	-	2486	7	FSM	ENSMUSG00000073139.10	ENSMUST00000114630.3	1307	7	27	-1206	-11	0	multi-exon	FALSE	canonical	3	188	junction_5	21.8587638158144	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	69520759	69503358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
tx.13382	chrX	-	2402	6	FSM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	27	0	-11	0	multi-exon	FALSE	canonical	3	32	junction_3	81.8300678235085	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	69520759	69503358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510968_69513723_69513901_69520583
tx.13383	chrX	-	2353	7	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	74.9288551449529	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	69520784	69503358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510810_69513723_69513901_69520583
tx.13384	chrX	+	1694	13	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	14	12525	-8	3909	5prime_fragment	FALSE	canonical	3	300	junction_1	25.7793791408732	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTGATAACATTCTT	NA	False	NA	NA	False	NA	NA	NA	70258625	70346376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106
tx.13385	chrX	+	3365	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	15	-1	-7	1	multi-exon	FALSE	canonical	3	290	junction_14	28.3207755284104	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGGGCTATGACTGTG	NA	False	NA	NA	False	NA	NA	NA	70258626	70358902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
tx.13386	chrX	+	2640	14	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	20	6488	-2	-1504	5prime_fragment	FALSE	canonical	3	300	junction_1	26.1022114731105	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAACCTTGTTGATTGG	NA	False	NA	NA	False	NA	NA	NA	70258631	70352413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305
tx.13387	chrX	+	1548	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	1	22	1	-22	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	476	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTATTACAACGGCCTA	NA	False	NA	NA	False	NA	NA	NA	70599524	70604260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
tx.13388	chrX	+	2651	4	NNC	ENSMUSG00000073131.13	novel	4652	4	NA	NA	-3522	1585	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	181.726901329073	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTCTTAATTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	70856007	70866175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_70856555_70860076_70860306_70863673_70863784_70864410
tx.13389	chrX	+	1886	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	32	2277	0	1445	multi-exon	FALSE	canonical	3	286	junction_1	56.5	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCTATTATTGATTTG	NA	False	NA	NA	False	NA	NA	NA	70860395	70866035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_70860547_70863673_70863784_70864410
tx.1339	chr10	+	2911	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	13	2	13	-2	multi-exon	TRUE	canonical	3	1246	junction_9	132.722869167299	411	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGCTTGCTCTTACG	NA	False	NA	NA	False	NA	NA	NA	128173615	128198346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
tx.13390	chrX	+	2270	7	Genic_Genomic	ENSMUSG00000033343.2	novel	948	1	NA	NA	-4066	463	multi-exon	FALSE	canonical	2	4	junction_1	3.07769755210323	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCGCCGGGCATCTGTT	NA	False	NA	NA	False	NA	NA	NA	71261556	71267033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_+_71261614_71262220_71262501_71263739_71263837_71264233_71264433_71264562_71264653_71264786_71264860_71265559
tx.13391	chrX	-	1225	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	27	34	27	-34	multi-exon	TRUE	canonical	3	590	junction_4	36.4862987983161	344	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTTCTGCCATAAATA	NA	False	NA	NA	False	NA	NA	NA	71961990	71957171	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
tx.13392	chrX	+	1761	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	31	376	31	-376	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTGGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	71962193	72001744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
tx.13393	chrX	-	2610	5	NNC	ENSMUSG00000050424.10	novel	2287	2	NA	NA	-2596	0	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_1	20.9568008054665	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTCTGGCGATGTTC	NA	False	NA	NA	False	NA	NA	NA	72083305	72077586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_72077934_72078769_72080775_72080892_72080952_72081548_72081672_72083229
tx.13394	chrX	-	1121	2	FSM	ENSMUSG00000050424.10	ENSMUST00000152209.2	1280	2	159	0	159	0	multi-exon	FALSE	canonical	1	35	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTATGTTCTTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	72079550	72077593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72077934_72078769
tx.13395	chrX	-	1592	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	55	-2	-17	0	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	547	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72140646	72129898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
tx.13396	chrX	-	1175	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	4	471	4	303	multi-exon	TRUE	canonical	3	269	junction_2	77.2438306598009	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72161304	72151711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
tx.13397	chrX	-	1076	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	4	303	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	76.0110088696878	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72161304	72151711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
tx.13398	chrX	+	1120	9	NNC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	-17	307	at_least_one_novel_splicesite	TRUE	canonical	3	104	junction_1	165.884749148317	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCATGCTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	72192384	72202006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_72192426_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
tx.13399	chrX	+	1662	9	FSM	ENSMUSG00000072479.11	ENSMUST00000114518.9	1652	9	4	-14	4	14	multi-exon	FALSE	canonical	3	121	junction_8	146.338167868127	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGAGGTATTTGGGGTT	NA	False	NA	NA	False	NA	NA	NA	72192405	72202492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
tx.134	chr1	-	938	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	-284	293	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_1	0	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACATAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	52992793	52964048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_52964894_52992700
tx.1340	chr10	+	2534	8	ISM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	13470	2	13394	-2	3prime_fragment	FALSE	canonical	3	1246	junction_6	155.283808635961	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGCTTGCTCTTACG	NA	False	NA	NA	False	NA	NA	NA	128187072	128198346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
tx.13400	chrX	+	1072	8	NIC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	8	306	combination_of_known_splicesites	FALSE	canonical	3	121	junction_7	152.49623615295	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72192409	72202005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
tx.13401	chrX	+	1606	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-32	-10	-17	0	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	473	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72235795	72246536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
tx.13402	chrX	+	1177	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	78.4071903590481	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72257953	72266059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_72258064_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
tx.13403	chrX	+	1210	9	FSM	ENSMUSG00000067768.13	ENSMUST00000069077.10	1200	9	-10	0	6	0	multi-exon	FALSE	canonical	3	74	junction_1	80.9281123899477	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72257944	72266059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_72258088_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
tx.13404	chrX	-	2418	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-17	2	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72309013	72298143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
tx.13405	chrX	-	1605	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	-19	-2	-19	2	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	452	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72309015	72298143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
tx.13406	chrX	-	1495	8	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_7	157.992508218147	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGTGTTCAGCACATA	NA	False	NA	NA	False	NA	NA	NA	72336599	72326503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336558
tx.13407	chrX	-	1129	9	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	-23	-473	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_8	149.667913645511	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72336605	72326974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336558
tx.13408	chrX	-	1084	8	NIC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	1	-472	combination_of_known_splicesites	FALSE	canonical	3	126	junction_6	133.486986295309	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCATGCTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	72336581	72326973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
tx.13409	chrX	-	1182	9	FSM	ENSMUSG00000067764.12	ENSMUST00000114503.9	1656	9	1	473	1	-473	multi-exon	TRUE	canonical	3	126	junction_7	127.059963698248	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72336581	72326974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
tx.1341	chr10	+	2078	5	ISM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	20676	0	20600	0	3prime_fragment	FALSE	canonical	3	1246	junction_3	202.127435050267	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTGCTCTTACGTA	3787	False	NA	NA	False	NA	NA	NA	128194278	128198348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
tx.13410	chrX	-	3742	2	Genic_Genomic	ENSMUSG00000096966.3	novel	2298	1	NA	NA	-3010	1252	multi-exon	FALSE	canonical	3	30	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCACCACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	72445352	72438792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_-_72442387_72445204
tx.13411	chrX	-	1368	10	FSM	ENSMUSG00000031371.15	ENSMUST00000033737.15	1380	10	12	0	12	0	multi-exon	FALSE	canonical	3	498	junction_3	42.8281089190294	397	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	False	NA	NA	False	NA	NA	NA	72502638	72480920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
tx.13412	chrX	+	2737	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	-15	0	-15	0	multi-exon	TRUE	canonical	3	583	junction_1	9.62635271879577	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGAGGTTGTTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	72683009	72687120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
tx.13413	chrX	+	2947	12	ISM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	1954	0	232	0	3prime_fragment	FALSE	canonical	3	360	junction_2	47.1901376445237	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	72719344	72726108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
tx.13414	chrX	-	1213	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	6	0	6	0	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	1519	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTGTGTCTAACTGAG	NA	False	NA	NA	False	NA	NA	NA	72759775	72729783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
tx.13415	chrX	+	3551	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	97	0	-46	0	multi-exon	TRUE	canonical	3	38	junction_7	8.3901765016235	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCCTGAACTTGGT	NA	False	NA	NA	False	NA	NA	NA	72760299	72782140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
tx.13416	chrX	-	1316	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	1072	junction_10	144.485579365652	594	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	NA	False	NA	NA	NA	72830500	72822568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
tx.13417	chrX	+	810	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-8	-2	-8	0	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	397	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5424	False	NA	NA	False	NA	NA	NA	72830625	72834432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
tx.13418	chrX	+	807	6	FSM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	-42	0	-8	0	multi-exon	FALSE	canonical	3	426	junction_1	441.755135793575	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5424	False	NA	NA	False	NA	NA	NA	72830625	72834432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
tx.13419	chrX	-	919	8	FSM	ENSMUSG00000031388.15	ENSMUST00000033763.15	962	8	41	2	3	0	multi-exon	FALSE	canonical	3	198	junction_1	315.02562254068	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGGGTATGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	72965509	72960480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72960802_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
tx.1342	chr10	+	1721	2	ISM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	22209	2	22133	-2	3prime_fragment	FALSE	canonical	3	1755	junction_1	0	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGCTTGCTCTTACG	1073	False	NA	NA	False	NA	NA	NA	128195811	128198346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128196023_128196836
tx.13420	chrX	-	1013	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	18	0	0	0	multi-exon	FALSE	canonical	3	794	junction_1	110.126457923125	644	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGGGTATGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	72965512	72960480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
tx.13421	chrX	-	1380	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	38	0	5	0	multi-exon	FALSE	canonical	3	1767	junction_7	141.190120050944	1356	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	NA	False	NA	NA	NA	72974418	72965726	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
tx.13422	chrX	-	1584	3	ISM	ENSMUSG00000031392.19	ENSMUST00000068286.12	2537	15	6572	356	991	-356	internal_fragment	FALSE	canonical	3	382	junction_1	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGAATTTGTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	73060949	73057887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_73059108_73060153_73060304_73060735
tx.13423	chrX	-	1813	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	33	8692	-24	4	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGAGTTTCGTGGCTTCG	NA	False	NA	NA	False	NA	NA	NA	73129242	73078889	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
tx.13424	chrX	-	1697	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	46	-4	25	4	multi-exon	FALSE	canonical	3	119	junction_2	51.5	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGAGTTTCGTGGCTTCG	NA	False	NA	NA	False	NA	NA	NA	73129250	73078889	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_73080101_73080587_73080939_73129115
tx.13425	chrX	+	2503	13	FSM	ENSMUSG00000031397.12	ENSMUST00000010127.12	2473	13	-32	2	-32	-2	multi-exon	FALSE	canonical	2	11	junction_9	3.8151743807532	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTTATGCAGTTTGTG	6444	False	NA	NA	False	NA	NA	NA	73220832	73252104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73221030_73225389_73225505_73234827_73234926_73237124_73237317_73237399_73237528_73240589_73240784_73241245_73241411_73244203_73244361_73246136_73246268_73248479_73248564_73249479_73249577_73249950_73250071_73251279
tx.13426	chrX	-	1846	9	ISM	ENSMUSG00000031328.17	ENSMUST00000144429.8	8233	47	18472	0	42	0	3prime_fragment	FALSE	canonical	3	605	junction_7	64.6634315127182	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	73271532	73267066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457
tx.13427	chrX	+	1345	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	110	140	-13	-140	multi-exon	FALSE	canonical	3	248	junction_2	18.1592951405059	222	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTGATTCTTCCTACT	NA	False	NA	NA	False	NA	NA	NA	73298402	73301353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
tx.13428	chrX	+	819	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	-22	2	-22	-2	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTTGTTTCTGATTC	NA	False	NA	NA	False	NA	NA	NA	73314395	73316739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
tx.13429	chrX	+	858	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	-3	0	0	0	multi-exon	FALSE	canonical	3	7516	junction_1	832.521615335001	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	NA	False	NA	NA	NA	73314462	73316741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
tx.1343	chr10	-	982	3	ISM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	3485	-4	198	4	3prime_fragment	FALSE	canonical	3	94	junction_2	5.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTTTTTGAGGGGG	NA	False	NA	NA	False	NA	NA	NA	128201075	128198964	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_128199661_128200273_128200376_128200891
tx.13430	chrX	+	1807	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	42	2	-11	1	multi-exon	FALSE	canonical	3	70	junction_7	76.3282385490455	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	73326344	73333755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
tx.13431	chrX	+	1746	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	-1	-3	-1	0	multi-exon	FALSE	canonical	3	81	junction_7	66.075241202738	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	NA	False	NA	NA	NA	73326354	73333757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
tx.13432	chrX	+	1810	10	NNC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	89.6831184136405	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	73326344	73333755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332569_73332626_73332710_73332789_73332904
tx.13433	chrX	+	1617	3	FSM	ENSMUSG00000009995.18	ENSMUST00000156788.2	808	3	-341	-468	260	1	multi-exon	FALSE	canonical	3	76	junction_1	92	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	73331937	73333755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73332626_73332710_73332789_73332904
tx.13434	chrX	+	2129	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	30	30	-16	2	multi-exon	TRUE	canonical	3	647	junction_4	26.5934179176579	443	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTTCGTGTCACTCA	NA	False	NA	NA	False	NA	NA	NA	73340732	73348297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
tx.13435	chrX	+	2419	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	247	0	-11	0	multi-exon	FALSE	canonical	3	553	junction_5	84.5884152824723	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6195	False	NA	NA	False	NA	NA	NA	73348850	73355468	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
tx.13436	chrX	+	1379	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	7	-3	7	3	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	310	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAACCTGCGCTTTATTT	206	False	NA	NA	False	NA	NA	NA	73356645	73363758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
tx.13437	chrX	-	751	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	9	1	9	0	multi-exon	FALSE	canonical	3	1433	junction_2	31	998	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGCCTCTAAATTTT	4502	False	NA	NA	False	NA	NA	NA	73397215	73395767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_73396105_73396479_73396609_73396930
tx.13438	chrX	-	2203	3	FSM	ENSMUSG00000015290.16	ENSMUST00000126117.2	2220	3	10	7	10	-7	multi-exon	FALSE	canonical	3	33	junction_2	782.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTCAGAACTGAATCCT	NA	False	NA	NA	False	NA	NA	NA	73412154	73409331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_73411193_73411306_73411516_73412021
tx.13439	chrX	-	624	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	135	1683	20	64	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	792	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGCTCATAGTGATAAT	NA	False	NA	NA	False	NA	NA	NA	73412144	73411006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
tx.1344	chr10	-	1320	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	-9	-4	-9	4	multi-exon	FALSE	canonical	3	22	junction_4	35.9400542570542	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTTTTTGAGGGGG	7236	False	NA	NA	False	NA	NA	NA	128204569	128198964	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204387
tx.13440	chrX	-	1978	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	45	0	1	0	multi-exon	FALSE	canonical	3	11	junction_2	8.5	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	73416910	73412822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_73414618_73416219_73416289_73416796
tx.13441	chrX	-	1834	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	42	23	25	19	multi-exon	FALSE	canonical	3	109	junction_1	16.2322017915007	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGTATTCAGATGTCC	NA	False	NA	NA	False	NA	NA	NA	73436836	73428347	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
tx.13442	chrX	-	2374	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	276	2	-38	-2	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTCTCCTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	73472524	73453090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
tx.13443	chrX	+	2830	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	26	476	-7	-476	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTATGTGTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	73473302	73493416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
tx.13444	chrX	-	636	3	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTCTGTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	73520860	73519691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_-_73519986_73520244_73520336_73520609
tx.13445	chrX	-	940	3	FSM	ENSMUSG00000079536.2	ENSMUST00000114125.2	627	3	-141	-172	-141	172	multi-exon	FALSE	canonical	3	15	junction_1	3.5	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCTGATTTTACTTTA	NA	False	NA	NA	False	NA	NA	NA	73525146	73523720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_73524038_73524213_73524343_73524652
tx.13446	chrX	+	1187	9	NNC	ENSMUSG00000081357.2	novel	648	7	NA	NA	-936	305	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	23.0867927612304	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGGATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	73987632	73995955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_73987753_73988067_73988151_73988537_73988666_73989350_73989420_73991236_73991355_73992188_73992289_73993476_73993576_73995367_73995464_73995581
tx.13447	chrX	+	1175	9	NNC	ENSMUSG00000081357.2	novel	648	7	NA	NA	-936	305	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.9081912722598	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGGATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	73987632	73995955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_73987777_73988067_73988115_73988537_73988666_73989350_73989420_73991236_73991355_73992188_73992289_73993476_73993576_73995367_73995464_73995581
tx.13448	chrX	-	1710	3	FSM	ENSMUSG00000032750.14	ENSMUST00000127024.2	750	3	-18	-942	-18	3	multi-exon	FALSE	canonical	3	11	junction_2	2	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTTCTTAGTTTTTTTT	2161	False	NA	NA	False	NA	NA	NA	74012749	74010445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_74011592_74011767_74011897_74012314
tx.13449	chrX	+	2598	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	206	0	7	0	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	1046	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	-59	True	NA	NA	NA	74139665	74153383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
tx.1345	chr10	-	891	5	ISM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	890	0	5	0	3prime_fragment	FALSE	canonical	3	274	junction_1	30.4989753926259	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	128244707	128237263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566
tx.13450	chrX	+	2671	16	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	815.250756243474	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	-50	True	NA	NA	NA	74139674	74153383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
tx.13451	chrX	+	2026	8	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	5016	0	-78	0	3prime_fragment	FALSE	canonical	3	1536	junction_2	488.001714617262	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	74144475	74153383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
tx.13452	chrX	-	929	4	ISM	ENSMUSG00000031402.13	ENSMUST00000114092.8	1378	12	17178	-374	4182	374	3prime_fragment	FALSE	canonical	3	242	junction_2	9.80929264637477	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGACCCTGTAACTCCA	NA	False	NA	NA	False	NA	NA	NA	74157272	74153879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191
tx.13453	chrX	-	1185	7	ISM	ENSMUSG00000031402.13	ENSMUST00000114092.8	1378	12	13021	-374	25	374	3prime_fragment	FALSE	canonical	3	210	junction_6	17.3565549577098	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGACCCTGTAACTCCA	NA	False	NA	NA	False	NA	NA	NA	74161429	74153879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361
tx.13454	chrX	-	1972	12	FSM	ENSMUSG00000031402.13	ENSMUST00000033775.9	2525	12	12	541	12	374	multi-exon	FALSE	canonical	3	210	junction_6	19.4626151487859	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGACCCTGTAACTCCA	NA	False	NA	NA	False	NA	NA	NA	74174610	74153879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
tx.13455	chrX	+	846	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	11	1705	11	426	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTATCTTGGTGTATG	548	False	NA	NA	False	NA	NA	NA	74426015	74438360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
tx.13456	chrX	-	976	3	FSM	ENSMUSG00000090110.9	ENSMUST00000033543.14	992	3	16	0	16	0	multi-exon	FALSE	canonical	3	61	junction_2	10	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	NA	NA	NA	74460155	74448451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_74448825_74453151_74453220_74459620
tx.13457	chrX	-	803	4	NNC	ENSMUSG00000090110.9	novel	507	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	27.1825107171668	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	NA	NA	NA	74460180	74448451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_74448825_74453151_74453220_74459620_74459820_74460017
tx.13458	chrX	-	688	4	FSM	ENSMUSG00000090110.9	ENSMUST00000149863.3	507	4	-1	-180	-1	0	multi-exon	FALSE	canonical	3	61	junction_2	9.20144916122817	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	NA	NA	NA	74460191	74448451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_74448825_74453151_74453220_74459620_74459820_74460143
tx.13459	chrX	-	1499	6	FSM	ENSMUSG00000031200.17	ENSMUST00000114081.2	980	6	-11	-508	-11	175	multi-exon	FALSE	canonical	3	22	junction_1	14.0370937162933	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTTGCGTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	74460205	74453874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460143
tx.1346	chr10	-	1083	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	47	0	47	0	multi-exon	FALSE	canonical	3	274	junction_1	32.5444140965679	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	128245696	128237263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
tx.13460	chrX	+	939	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	-18	-591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	482.141819774016	221	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTAATATTTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	74460284	74493747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
tx.13461	chrX	+	1490	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-18	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	78	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTAACATTGTCACTAC	NA	False	NA	NA	False	NA	NA	NA	74460284	74494836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
tx.13462	chrX	+	1090	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-18	1701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	521.510200177225	10	3	1	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGGTCATGGTATTTT	NA	False	NA	NA	False	NA	NA	NA	74460284	74499308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74499161
tx.13463	chrX	+	1561	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	29	5	11	-5	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	3009	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGCCTGACAATTTTT	NA	False	NA	NA	False	NA	NA	NA	74557933	74578543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
tx.13464	chrX	-	1297	2	FSM	ENSMUSG00000031202.6	ENSMUST00000033545.6	3401	2	3	2101	3	-2101	multi-exon	FALSE	canonical	3	5	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATGATATCAACTTATT	445	False	NA	NA	False	NA	NA	NA	74621834	74617752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_74618614_74621398
tx.13465	chrX	-	3122	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	18	9	18	0	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTCTACTCTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	74918770	74829268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
tx.13466	chrX	+	2368	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	5	2861	5	379	multi-exon	TRUE	canonical	3	377	junction_1	40.4669412401448	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAGAAAAAATGCTGT	NA	False	NA	NA	False	NA	NA	NA	76554623	76703728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
tx.13467	chrX	-	4299	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	286	-439	-20	439	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	76839598	76804577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
tx.13468	chrX	-	579	2	ISM	ENSMUSG00000035725.14	ENSMUST00000114044.2	2639	4	13	14675	13	-14675	5prime_fragment	FALSE	canonical	3	48	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGAGTTCCTGGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	76839565	76829735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_76829903_76839153
tx.13469	chrX	+	1163	3	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGTTTCCGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	77989101	77991741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_+_77989454_77990197_77990608_77991340
tx.1347	chr10	+	2329	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-101	916	-12	-4	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTTATGCCCTTTCTT	214	False	NA	NA	False	NA	NA	NA	128247513	128275291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
tx.13470	chrX	+	813	2	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGTTTCCGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	77990195	77991741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_+_77990608_77991340
tx.13471	chrX	-	1725	3	FSM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	42	544	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	78679188	78666836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_78668390_78671446_78671527_78679096
tx.13472	chrX	+	3783	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-52	276	-34	-276	multi-exon	TRUE	canonical	3	148	junction_2	10.5	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTTTCTTTCCTGCTA	NA	False	NA	NA	False	NA	NA	NA	80114269	80141202	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_80114767_80127896_80128038_80138057
tx.13473	chrX	+	2127	2	ISM	ENSMUSG00000025666.17	ENSMUST00000171953.8	1801	4	13615	-735	13604	735	intron_retention	FALSE	canonical	3	148	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAGTAAATATAAATACC	NA	False	NA	NA	False	NA	NA	NA	80127925	80140072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_80128038_80138057
tx.13474	chrX	-	1011	4	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	51.8737784327389	67	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAAGGGTTCTTCTTT	1163	False	NA	NA	False	NA	NA	NA	83486713	83458140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chrX_-_83458730_83459197_83459397_83473568_83473652_83486573
tx.13475	chrX	-	3137	3	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	63.5	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCTGTGGTTTTTGCAT	1156	False	NA	NA	False	NA	NA	NA	83486720	83467130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chrX_-_83470038_83473568_83473652_83486573
tx.13476	chrX	+	2213	7	FSM	ENSMUSG00000045103.20	ENSMUST00000132333.8	2133	7	-63	-17	-39	17	multi-exon	FALSE	canonical	3	317	junction_3	27.9011150713053	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTGCTTTGGAGGACC	NA	False	NA	NA	False	NA	NA	NA	84091861	84184359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933
tx.13477	chrX	+	2080	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-9	88	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCGCATGGTTTTTATAA	NA	False	NA	NA	False	NA	NA	NA	84091891	84246192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
tx.13478	chrX	-	2053	4	ISM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	64213	658	51	-658	3prime_fragment	FALSE	canonical	3	146	junction_1	3.77123616632825	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	NA	False	NA	NA	NA	84756030	84746200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947
tx.13479	chrX	-	3512	19	FSM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	170	658	4	-658	multi-exon	TRUE	canonical	3	19	junction_1	33.6576812358314	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	NA	False	NA	NA	NA	84820255	84746200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
tx.1348	chr10	+	2470	11	ISM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	-75	18259	-2	2229	5prime_fragment	FALSE	canonical	3	89	junction_2	8.72696969170857	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAGAAAAAAGAAAC	2619	False	NA	NA	False	NA	NA	NA	128295114	128306966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533
tx.13480	chrX	-	3604	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-17	658	-1	-658	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	NA	False	NA	NA	NA	84820260	84746200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
tx.13481	chrX	-	1937	19	NIC	ENSMUSG00000025059.17	novel	778	8	NA	NA	-34	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	37.4737768395085	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGTTTCAGCAGTAT	NA	False	NA	NA	False	NA	NA	NA	84820293	84750602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_84750792_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
tx.13482	chrX	+	1797	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	11	0	11	0	multi-exon	FALSE	canonical	3	839	junction_1	0	620	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGAGAGTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	85235380	85239553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_85236581_85238956
tx.13483	chrX	-	1504	2	Genic_Genomic	ENSMUSG00000080069.3	novel	1023	1	NA	NA	-9146	380	multi-exon	FALSE	canonical	3	24	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAATGACTCAGATGTTT	NA	False	NA	NA	False	NA	NA	NA	85398597	85388048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_-_85389457_85398501
tx.13485	chrX	+	586	2	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTTCTGGTTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	88052052	88080612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_+_88052327_88080300
tx.13486	chrX	+	1370	2	Genic_Genomic	ENSMUSG00000091497.2	novel	993	1	NA	NA	-13819	209	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTCATTTATTGACT	NA	False	NA	NA	False	NA	NA	NA	89921928	89936949	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_+_89922040_89935690
tx.13487	chrX	+	1694	3	Genic_Genomic	ENSMUSG00000096072.2	novel	1035	1	NA	NA	-1422	473	multi-exon	FALSE	canonical	2	3	junction_1	0.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGTCTCTGTCATT	NA	False	NA	NA	False	NA	NA	NA	90522309	90525239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_+_90522413_90523542_90523599_90523704
tx.13489	chrX	-	5327	37	FSM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	20	-1	8	1	multi-exon	FALSE	canonical	3	370	junction_20	43.7489682418023	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4297	False	NA	NA	False	NA	NA	NA	92675741	92348371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
tx.1349	chr10	-	649	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	15	1	-3	0	multi-exon	FALSE	canonical	3	2189	junction_3	223.361948415571	2518	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8239	False	NA	NA	False	NA	NA	NA	128329729	128326729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
tx.13490	chrX	-	611	7	ISM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	4	299687	4	18622	5prime_fragment	FALSE	canonical	3	401	junction_2	32.1645076995678	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTACTGGGGCTTTGCTC	4281	False	NA	NA	False	NA	NA	NA	92675757	92648059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
tx.13491	chrX	+	2273	8	FSM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	211	2404	211	-2404	multi-exon	FALSE	canonical	3	56	junction_6	4.01527694930148	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATTCCTGTTGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	92718918	92791153	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
tx.13492	chrX	-	2071	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	26	18	26	-18	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGAATTTCTCACTTA	NA	False	NA	NA	False	NA	NA	NA	92875781	92808230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
tx.13493	chrX	-	2734	5	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	11790	0	11732	0	3prime_fragment	FALSE	canonical	3	1008	junction_2	53.8725347463807	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	93244525	93232312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495
tx.13494	chrX	-	3593	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	52	2	-6	-2	multi-exon	TRUE	canonical	3	1008	junction_2	64.9970120101527	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTGTGCCCATGTGT	NA	False	NA	NA	False	NA	NA	NA	93256263	93232314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
tx.13495	chrX	-	1320	6	ISM	ENSMUSG00000035150.16	ENSMUST00000113922.2	1103	9	-40	3684	18	-445	5prime_fragment	FALSE	canonical	3	1037	junction_3	70.6184111970809	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTGCCAGTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	93256297	93246930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
tx.13496	chrX	+	1146	5	NIC	ENSMUSG00000043929.17	novel	627	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	18.9868375460475	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGCCTGGCATGTTT	NA	False	NA	NA	False	NA	NA	NA	93278204	93297673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_93278260_93278826_93279027_93285550_93285602_93296020_93296733_93297545
tx.13497	chrX	+	1290	5	FSM	ENSMUSG00000043929.17	ENSMUST00000113911.9	1227	5	-63	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	15.1224171348366	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGCCTGGCATGTTT	NA	False	NA	NA	False	NA	NA	NA	93278532	93297673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020_93296733_93297545
tx.13498	chrX	+	926	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	-10	-132	-10	0	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	False	NA	NA	False	NA	NA	NA	93410712	93460699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
tx.13499	chrX	+	799	8	ISM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	7	4294	7	-4294	5prime_fragment	FALSE	canonical	3	325	junction_1	49.0588983794386	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGGCTCATGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	93410729	93456273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065
tx.135	chr1	-	652	9	NNC	ENSMUSG00000060715.10	novel	646	9	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	14.6452850774575	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGGAATTGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	53226774	53197731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_53197948_53202384_53202428_53209396_53209420_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53224373_53224450_53226712
tx.1350	chr10	-	1356	13	ISM	ENSMUSG00000025366.9	ENSMUST00000220045.2	3409	24	116	4569	113	-4569	5prime_fragment	FALSE	canonical	3	144	junction_4	14.9524709960892	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCCCAGGACCTTCCTG	8434	False	NA	NA	False	NA	NA	NA	128361624	128355315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
tx.13500	chrX	-	1428	10	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	3236	0	-81	0	3prime_fragment	TRUE	canonical	3	1316	junction_6	172.034234319155	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	NA	False	NA	NA	NA	93582513	93579079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212
tx.13501	chrX	-	2704	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	117	0	-23	0	multi-exon	FALSE	canonical	3	1240	junction_10	166.264514821681	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	NA	False	NA	NA	NA	93585632	93579079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
tx.13502	chrX	-	1475	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	6	7015	6	-7015	multi-exon	FALSE	canonical	3	18	junction_1	0	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	94488472	94470938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_94472205_94488263
tx.13503	chrX	-	2174	5	FSM	ENSMUSG00000035062.14	ENSMUST00000044382.7	2219	5	51	-6	-50	0	multi-exon	FALSE	canonical	3	32	junction_1	3.76662979332984	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGAGTGCATTCTG	932	False	NA	NA	False	NA	NA	NA	94702064	94682798	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_94684258_94685769_94685933_94686913_94687087_94688912_94689085_94701857
tx.13504	chrX	-	2535	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	10	-15	10	15	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGATGAGGGATGTG	NA	False	NA	NA	False	NA	NA	NA	95000509	94978925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
tx.13505	chrX	-	831	3	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	16264	-14	6806	14	3prime_fragment	FALSE	canonical	3	1010	junction_1	9	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGAGATGAGGGATGT	NA	False	NA	43	True	NA	NA	NA	94984255	94978926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_94979256_94980977_94981129_94983904
tx.13506	chrX	-	2347	5	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_4	9.30053761886914	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGTATGTGTAAGATT	NA	False	NA	NA	False	NA	NA	NA	95012250	95004071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008875_95012086
tx.13507	chrX	-	2531	5	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_4	10.5918600821574	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTATGTGTATGTGTAA	NA	False	NA	NA	False	NA	NA	NA	95011568	95004075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008735_95011076
tx.13508	chrX	+	1916	4	FSM	ENSMUSG00000031207.17	ENSMUST00000149985.8	1883	4	-16	-17	-1	17	multi-exon	FALSE	canonical	3	1220	junction_3	48.6095555306659	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCATATAGGTGACTAA	NA	False	NA	NA	False	NA	NA	NA	95139646	95197662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129
tx.13509	chrX	+	3843	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	0	-1	0	1	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	95139647	95212159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
tx.1351	chr10	-	2102	3	FSM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	19	1600	-12	1235	multi-exon	FALSE	canonical	3	75	junction_2	17	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAATTTCTTTGATGGC	NA	False	NA	NA	False	NA	NA	NA	128383624	128379431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128381408_128382696_128382761_128383562
tx.13510	chrX	-	1226	8	NNC	ENSMUSG00000034457.11	novel	779	6	NA	NA	-17	38384	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	50.6117676080194	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTCAGTGTTCATCCTT	NA	False	NA	NA	False	NA	NA	NA	96420839	96339061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_96339435_96340422_96340518_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
tx.13511	chrX	-	2188	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	-17	-18	-17	18	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAATTGTATCTCATTCT	NA	False	NA	NA	False	NA	NA	NA	96420839	96381378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
tx.13512	chrX	+	2478	9	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	23	-875	intron_retention	FALSE	canonical	1	1	junction_7	105.14127400788	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTTTCAAGGTGTAC	NA	False	NA	NA	False	NA	NA	NA	97980929	97991748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478_97988932_97990845_97990938_97991318
tx.13513	chrX	+	599	6	FSM	ENSMUSG00000047694.13	ENSMUST00000140479.2	1020	6	-16	437	-16	-37	multi-exon	FALSE	canonical	3	239	junction_3	12.2376468326227	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTTGTTGATGTT	NA	False	NA	NA	False	NA	NA	NA	97981796	97987204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083
tx.13514	chrX	+	1339	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	430	3442	-16	444	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTATACTTACTTT	NA	False	NA	NA	False	NA	NA	NA	97981796	97989181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
tx.13515	chrX	+	3318	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	-46	-14	-46	14	multi-exon	FALSE	canonical	3	33	junction_1	5.76085931090146	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAACCACATGGAGAA	NA	False	NA	NA	False	NA	NA	NA	98179689	98192611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
tx.13516	chrX	+	728	4	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGAGTGCCTGGCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	98499395	98501336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_+_98499476_98499985_98500034_98500399_98500510_98500846
tx.13517	chrX	-	2583	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	-16	-4	-16	4	multi-exon	FALSE	canonical	3	84	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	98514314	98509715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_98512207_98514222
tx.13518	chrX	-	1760	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-24	372	-19	4	multi-exon	FALSE	canonical	3	92	junction_1	143.5	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	98514317	98509715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_98511189_98511728_98511921_98514222
tx.13519	chrX	-	2304	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	20	342	20	4	multi-exon	FALSE	canonical	3	379	junction_1	0	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	98514321	98509715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_98511921_98514222
tx.1352	chr10	-	391	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	191	0	-2	0	multi-exon	FALSE	canonical	3	7075	junction_3	6241.33064516071	40116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	128384983	128383982	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128384299_128384526_128384550_128384817_128384843_128384956
tx.13520	chrX	-	1930	2	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACATGTCTTTACTTGA	NA	False	NA	NA	False	NA	NA	NA	99537774	99525629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_-_99527286_99537500
tx.13521	chrX	+	1337	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	60	121	-4	-121	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	726	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTATCCGCTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	99537956	99559610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
tx.13522	chrX	-	1062	7	FSM	ENSMUSG00000015668.14	ENSMUST00000059099.7	1041	7	4	-25	4	0	multi-exon	FALSE	canonical	3	137	junction_6	158.307366291724	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	NA	False	NA	NA	NA	99669537	99666488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
tx.13523	chrX	-	1016	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	613	-3	-17	0	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	NA	False	NA	NA	NA	99669561	99666488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
tx.13524	chrX	+	4638	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	345	0	345	0	multi-exon	TRUE	canonical	3	204	junction_20	20.3345386022518	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGAGATCCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	99669687	99770820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
tx.13525	chrX	+	1021	5	ISM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	381	88780	381	2127	5prime_fragment	FALSE	canonical	3	223	junction_2	17.2825779327044	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAGAATGACAAGTAA	NA	False	NA	NA	False	NA	NA	NA	99669723	99682040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889
tx.13526	chrX	+	3371	12	FSM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	-53	-2	-53	0	multi-exon	FALSE	canonical	3	72	junction_1	11.5078126534158	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTCAGAGGTCTTCT	646	False	NA	NA	False	NA	NA	NA	99820837	99862016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
tx.13527	chrX	-	3265	30	FSM	ENSMUSG00000009670.12	ENSMUST00000009814.10	3250	30	-14	-1	14	1	multi-exon	TRUE	canonical	3	57	junction_17	8.2193472636908	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATTGATCAGCTGATTT	NA	False	NA	NA	False	NA	NA	NA	100103259	99882252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
tx.13528	chrX	-	2142	11	ISM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	1077	-9	-94	-2	3prime_fragment	FALSE	canonical	3	1326	junction_4	61.814318729563	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAAACCTGTCCTGTTC	NA	False	NA	NA	False	NA	NA	NA	100127881	100122817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476
tx.13529	chrX	-	2266	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	-24	-10	9	-2	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAAACCTGTCCTGTTC	NA	False	NA	NA	False	NA	NA	NA	100129002	100122817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
tx.1353	chr10	-	1640	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-24	867	-24	-867	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	2826	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCGTCAAGCCCCTCTTT	8668	False	NA	NA	False	NA	NA	NA	128401880	128394503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
tx.13530	chrX	-	769	3	NIC	ENSMUSG00000046032.17	novel	1114	6	NA	NA	36	7	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	95.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTAGTTTCTCTTATTG	NA	False	NA	NA	False	NA	NA	NA	100266119	100141384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_100141834_100145973_100146042_100265867
tx.13531	chrX	-	1099	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	19	-4	15	4	multi-exon	FALSE	canonical	3	192	junction_2	126.702170462861	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGCTAGTTTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	100266140	100141387	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
tx.13532	chrX	-	798	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	-4	20	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	196.230731538156	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAATGTATTATTTCCT	NA	False	NA	NA	False	NA	NA	NA	100266163	100255544	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_100255735_100257379_100257471_100258006_100258132_100259088_100259185_100265867
tx.13533	chrX	-	2396	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	19	0	19	0	multi-exon	FALSE	canonical	3	422	junction_3	23.8094285712381	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	NA	False	NA	NA	NA	100266136	100255564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
tx.13534	chrX	-	973	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	29	0	15	0	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	NA	False	NA	NA	NA	100266140	100255564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
tx.13535	chrX	-	1633	8	FSM	ENSMUSG00000031304.19	ENSMUST00000033664.14	1670	8	28	9	28	-9	multi-exon	FALSE	canonical	3	20	junction_5	5.61702950038214	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAGAATGTCTGTTACA	NA	False	NA	NA	False	NA	NA	NA	100311833	100307992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_100308644_100308981_100309049_100309235_100309333_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
tx.13536	chrX	+	1548	2	FSM	ENSMUSG00000047797.15	ENSMUST00000119190.2	1585	2	33	4	33	-4	multi-exon	FALSE	canonical	2	2	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGGTGTTTTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	100427374	100429231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_100427449_100427757
tx.13537	chrX	-	1848	7	ISM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	107	10549	2	0	5prime_fragment	FALSE	canonical	3	74	junction_4	23.7065391822594	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCAGCCTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	100463413	100458538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
tx.13538	chrX	+	1453	5	ISM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	113	6141	-67	19	5prime_fragment	FALSE	canonical	3	3075	junction_4	432.2021373154	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCCTCTTAGAATCTG	NA	False	NA	NA	False	NA	NA	NA	100473273	100486056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121
tx.13539	chrX	+	2432	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	130	0	-50	0	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	1204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	100473290	100492197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
tx.1354	chr10	-	436	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	246	-1	23	1	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	3924	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	128462370	128460404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
tx.13540	chrX	+	1933	3	ISM	ENSMUSG00000031314.19	ENSMUST00000140470.2	648	6	4876	-458	4876	-5	intron_retention	FALSE	canonical	3	335	junction_1	10.5	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	NA	NA	NA	100639028	100644635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_100639063_100639693_100639872_100642914
tx.13541	chrX	+	1814	2	ISM	ENSMUSG00000031314.19	ENSMUST00000140470.2	648	6	5626	-458	5626	-5	intron_retention	FALSE	canonical	3	356	junction_1	0	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	NA	NA	NA	100639778	100644635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_100639872_100642914
tx.13542	chrX	+	1440	4	FSM	ENSMUSG00000034160.14	ENSMUST00000150161.8	3087	4	-44	1691	0	1	multi-exon	FALSE	canonical	3	215	junction_1	65.0743164901996	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAGGACAAAGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	100683669	100696501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745
tx.13543	chrX	+	1380	4	FSM	ENSMUSG00000034160.14	ENSMUST00000155792.2	1333	4	-47	0	-1	0	multi-exon	FALSE	canonical	3	162	junction_1	90.0530707724926	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGAAGGACAAAGCTGGT	NA	False	NA	NA	False	NA	NA	NA	100683698	100696500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745
tx.13544	chrX	+	1834	5	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	6.49519052838329	29	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTAGCCTCAAACTCA	9258	False	NA	NA	False	NA	NA	NA	100739441	100749340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884
tx.13545	chrX	-	2014	6	FSM	ENSMUSG00000045010.15	ENSMUST00000147742.9	1991	6	-22	-1	-22	1	multi-exon	FALSE	canonical	3	142	junction_5	73.271003814606	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838051	100833952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_100834130_100834212_100834255_100834844_100834891_100835166_100835250_100835786_100835944_100836542
tx.13546	chrX	-	368	2	ISM	ENSMUSG00000045010.15	ENSMUST00000124577.8	1190	7	2470	290	2470	5	3prime_fragment	FALSE	canonical	3	308	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGCAACTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	100834399	100833948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_100834130_100834212
tx.13547	chrX	+	2039	7	FSM	ENSMUSG00000046774.18	ENSMUST00000163399.8	1991	7	-43	-5	-43	1	multi-exon	FALSE	canonical	3	67	junction_5	79.7050116924205	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838218	100842249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
tx.13548	chrX	+	1009	7	NNC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-33	-1	intron_retention	FALSE	canonical	2	5	junction_1	102.217089243107	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838228	100842247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_100838373_100839575_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
tx.13549	chrX	+	2030	7	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	47	junction_5	86.9329243344162	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838234	100842247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841772_100841947_100841990_100842072
tx.1355	chr10	-	3201	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	-18	-3	-18	3	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGACTGTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	128532151	128513040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
tx.13550	chrX	+	2212	6	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	236	junction_4	22.2656686403081	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838228	100842247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
tx.13551	chrX	+	1238	7	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-44	1	intron_retention	FALSE	canonical	3	15	junction_1	98.5675177508065	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838217	100842249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_100838373_100839359_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
tx.13552	chrX	+	737	2	ISM	ENSMUSG00000046774.18	ENSMUST00000151231.10	1940	6	3168	-1	3138	1	3prime_fragment	FALSE	canonical	3	283	junction_1	0	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100841429	100842249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_100841990_100842072
tx.13553	chrX	+	472	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	17	0	17	0	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTTTTCTATTTTGT	NA	False	NA	NA	False	NA	NA	NA	101163069	101171275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
tx.13554	chrX	-	4063	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	0	1239	0	-1239	multi-exon	FALSE	canonical	3	249	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCCATTCATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	101200697	101186560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_101190440_101200513
tx.13555	chrX	-	903	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	71	1	13	-1	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	24069	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	101232929	101228547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
tx.13556	chrX	-	802	3	FSM	ENSMUSG00000051159.17	ENSMUST00000050551.10	901	3	98	1	98	-1	multi-exon	FALSE	canonical	3	131	junction_2	38	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGCCTGGGTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	101295689	101290987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_101291615_101292168_101292294_101295639
tx.13557	chrX	-	750	2	ISM	ENSMUSG00000051159.17	ENSMUST00000130589.2	576	3	2088	-437	2088	-3	3prime_fragment	FALSE	canonical	3	207	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAACTGCCTGGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	101292293	101290989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_101291615_101292168
tx.13558	chrX	-	1744	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	193	-1	-20	1	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTCCCACCGCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	101548772	101328243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
tx.13559	chrX	-	2576	4	ISM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	123412	1	123412	-1	3prime_fragment	TRUE	canonical	3	45	junction_2	17.2497987105808	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGGTGTTACTGCAC	NA	False	NA	NA	False	NA	NA	NA	101564440	101557581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359
tx.1356	chr10	-	1656	4	FSM	ENSMUSG00000000711.4	ENSMUST00000220593.2	1629	4	-11	-16	-4	16	multi-exon	FALSE	canonical	3	160	junction_3	13.5728487143349	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACAAATAAGATGAGCA	NA	False	NA	NA	False	NA	NA	NA	128532137	128517655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128518816_128519063_128519216_128522616_128522878_128532054
tx.13560	chrX	-	494	3	FSM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	-151	-6	-151	6	multi-exon	FALSE	canonical	3	77	junction_2	7	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGACTGTGTGAAATTT	3476	False	NA	NA	False	NA	NA	NA	101730729	101729891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_101730044_101730198_101730354_101730542
tx.13561	chrX	-	472	3	FSM	ENSMUSG00000079479.3	ENSMUST00000113610.3	420	3	-52	0	-52	0	multi-exon	FALSE	canonical	3	12	junction_2	3	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGACTTCGTGAAAATT	NA	False	NA	NA	False	NA	NA	NA	101751293	101750495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_101750648_101750793_101750958_101751137
tx.13562	chrX	+	1398	7	FSM	ENSMUSG00000073027.11	ENSMUST00000101324.9	1200	7	-53	-145	-53	145	multi-exon	FALSE	canonical	0	0	junction_4	1.5723301886761	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTTGTTTGTGAAAAC	3811	False	NA	NA	False	NA	NA	NA	101751417	101758960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_101751533_101754965_101755124_101755540_101755600_101755900_101756038_101756834_101756896_101757072_101757251_101758270
tx.13563	chrX	-	1641	9	FSM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	-22	-8	-22	8	multi-exon	FALSE	canonical	0	0	junction_7	64.8072864344743	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	NA	NA	NA	101898244	101891236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101897739_101897930_101898030
tx.13564	chrX	-	1457	8	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_7	44.1518714790442	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	NA	NA	NA	101898222	101891236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898002
tx.13565	chrX	+	1421	8	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	8	8	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	52.0670682085782	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	NA	NA	NA	101846576	101853556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_101846761_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
tx.13566	chrX	-	1457	8	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_7	44.1518714790442	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	NA	NA	NA	101898222	101891236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898002
tx.13567	chrX	+	1614	9	FSM	ENSMUSG00000067562.12	ENSMUST00000118218.8	1611	9	3	-6	3	6	multi-exon	FALSE	canonical	0	0	junction_2	65.1257197656963	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	NA	NA	NA	101846571	101853554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_101846761_101846861_101847052_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
tx.13568	chrX	-	3013	2	Fusion	ENSMUSG00000031325.16_ENSMUSG00000082229.2	novel	685	4	NA	NA	-141	24	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTTTAAACTATAAAGG	NA	False	NA	NA	False	NA	NA	NA	102355529	102227757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chrX_-_102230480_102355238
tx.13569	chrX	+	1305	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	23	6047	23	-6047	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGTAAATATTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	102400104	102433651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
tx.1357	chr10	-	2276	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	-35	-1	-7	1	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAATCTCTTTCATATT	8240	False	NA	NA	False	NA	NA	NA	128540907	128533806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
tx.13570	chrX	+	821	7	FSM	ENSMUSG00000031329.5	ENSMUST00000033691.5	812	7	-2	-7	-2	7	multi-exon	FALSE	canonical	3	20	junction_2	4.2687494916219	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTCTGTGTCACTGTT	NA	False	NA	NA	False	NA	NA	NA	102458070	102468193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_102458253_102459640_102459677_102460356_102460394_102461814_102461897_102464105_102464207_102465593_102465653_102467869
tx.13571	chrX	+	2371	2	NIC	ENSMUSG00000085715.3	novel	4306	4	NA	NA	-8	981	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGACGCGTGAATTTC	NA	False	NA	NA	False	NA	NA	NA	102491319	102526993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_102491578_102524880
tx.13572	chrX	+	2284	2	NNC	ENSMUSG00000085715.3	novel	3263	2	NA	NA	9	928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTATATTATAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	102491336	102526940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_102491561_102524880
tx.13573	chrX	-	2205	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	9	5215	9	-5215	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTCATTGCTTTCTTAG	2382	False	NA	NA	False	NA	NA	NA	103024881	103005983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
tx.13574	chrX	-	2711	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	0	2956	0	-2956	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTAGGGGTTTTTTTC	9861	False	NA	NA	False	NA	NA	NA	103457452	103327218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
tx.13575	chrX	+	1599	7	FSM	ENSMUSG00000073016.4	ENSMUST00000087867.6	2304	7	0	705	0	-705	multi-exon	FALSE	canonical	2	8	junction_1	1.67497927018682	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	False	NA	NA	False	NA	NA	NA	103526423	103550391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103549761
tx.13576	chrX	-	1679	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	94	3736	94	-3736	multi-exon	TRUE	canonical	3	93	junction_8	6.78841989185253	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTATTTGATCATGCT	NA	False	NA	NA	False	NA	NA	NA	103714576	103584310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
tx.13577	chrX	-	751	5	FSM	ENSMUSG00000087174.8	ENSMUST00000138460.8	3732	5	34	2947	-3	2	multi-exon	FALSE	canonical	3	29	junction_1	38.5940409908058	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGATTTACATGTAGT	NA	False	NA	NA	False	NA	NA	NA	104113696	104087406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_104087718_104110364_104110484_104112069_104112235_104113216_104113282_104113605
tx.13578	chrX	-	870	6	FSM	ENSMUSG00000087174.8	ENSMUST00000140954.8	3287	6	17	2400	1	2	multi-exon	FALSE	canonical	3	59	junction_2	25.9183332797462	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGATTTACATGTAGT	NA	False	NA	NA	False	NA	NA	NA	104113713	104087406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113605
tx.13579	chrX	+	925	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	14	1699	-5	327	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	495	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGACTGATCTTAGAAA	NA	False	NA	NA	False	NA	NA	NA	104123375	104127093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
tx.1358	chr10	-	2436	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-24	-6	-23	1	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAATCTCTTTCATATT	8224	False	NA	NA	False	NA	NA	NA	128540923	128533806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
tx.13580	chrX	-	3040	8	NIC	ENSMUSG00000031229.17	novel	1716	9	NA	NA	0	-19	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	93.0330202516443	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAGATAAATCATGTGA	NA	False	NA	NA	False	NA	NA	NA	104972183	104918754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
tx.13581	chrX	-	2398	9	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	0	603	combination_of_known_junctions	FALSE	canonical	3	34	junction_8	72.3134453265781	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATCAACAGAAACCTC	NA	False	NA	NA	False	NA	NA	NA	104972183	104919510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
tx.13582	chrX	-	2692	9	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	0	603	combination_of_known_junctions	FALSE	canonical	3	69	junction_8	63.7397050510904	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATCAACAGAAACCTC	NA	False	NA	NA	False	NA	NA	NA	104972948	104919510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
tx.13583	chrX	-	2273	8	NIC	ENSMUSG00000031229.17	novel	1835	8	NA	NA	-35	556	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	83.1057845674501	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACGGAAAAATTCTACT	NA	False	NA	NA	False	NA	NA	NA	104972218	104919557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972093
tx.13584	chrX	-	1432	5	ISM	ENSMUSG00000031229.17	ENSMUST00000101305.9	2903	6	0	4765	0	1061	5prime_fragment	FALSE	canonical	3	34	junction_4	79.6241169495775	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCTGCTCTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	104972183	104930325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
tx.13585	chrX	-	3429	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	66	1029	-47	-1029	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105055439	105012718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
tx.13586	chrX	+	482	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	27	492	11	0	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	3099	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	105059332	105065564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_105059477_105063184_105063310_105065351
tx.13587	chrX	+	1779	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	46	0	-17	0	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	2676	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCCTGTCATACTTTG	NA	False	NA	NA	False	NA	NA	NA	105230751	105247305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
tx.13588	chrX	-	1657	6	FSM	ENSMUSG00000031239.6	ENSMUST00000033591.6	1744	6	-12	99	-12	-99	multi-exon	FALSE	canonical	3	44	junction_1	8.06473806146238	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTTTATTTTCATCAC	NA	False	NA	NA	False	NA	NA	NA	106446994	106440803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_106441586_106441701_106441853_106442376_106442488_106442701_106442900_106443172_106443305_106446711
tx.13589	chrX	-	1207	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	44	4591	44	495	multi-exon	TRUE	canonical	3	41	junction_6	7.21958786771044	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTCGCATAACCCAGAC	NA	False	NA	NA	False	NA	NA	NA	106859896	106830947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
tx.1359	chr10	+	2180	12	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-32	-109	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	18.002295537739	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTTTTGTTGCTGTTCGT	NA	False	NA	NA	False	NA	NA	NA	128541016	128555998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_128541154_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
tx.13590	chrX	+	969	3	NIC	ENSMUSG00000086629.9	novel	546	3	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	3	8	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTGTAACAGACAATGA	NA	False	NA	NA	False	NA	NA	NA	107878284	107930503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_107878611_107879871_107879962_107929950
tx.13591	chrX	-	1932	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATGGTTTGCAATATTT	NA	False	NA	NA	False	NA	NA	NA	108057010	108048141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
tx.13592	chrX	+	2778	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	100	4	-44	-4	multi-exon	FALSE	canonical	3	20	junction_1	2.86744175568088	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTGATTACTTTTA	NA	False	NA	NA	False	NA	NA	NA	108139070	108206073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
tx.13593	chrX	-	4132	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	19	0	19	0	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	110372873	110297888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
tx.13594	chrX	-	4284	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	110373194	110297888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
tx.13595	chrX	-	4300	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	110373225	110297888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
tx.13596	chrX	-	4109	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	19	7	19	-7	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATCATTTAGTCTT	NA	False	NA	NA	False	NA	NA	NA	110372873	110297896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
tx.13597	chrX	+	1307	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	47	5	15	-5	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	290	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACACGAGCTTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	111221077	111282447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
tx.13598	chrX	-	4023	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	8	837	0	-835	multi-exon	TRUE	canonical	3	145	junction_7	16.3001189428489	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTTCCAGGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	112095206	111951126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
tx.13599	chrX	+	860	2	FSM	ENSMUSG00000050435.3	ENSMUST00000059509.3	743	2	-114	-3	-114	3	multi-exon	FALSE	canonical	3	30	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCATTTTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	113814594	113815641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_113814900_113815086
tx.136	chr1	-	811	6	NNC	ENSMUSG00000060715.10	novel	646	9	NA	NA	-5	267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.6388539437744	3	6	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGGTTTAAGCACAGT	NA	False	NA	NA	False	NA	NA	NA	53226772	53197468	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_53197948_53209506_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53226712
tx.1360	chr10	+	2016	11	FSM	ENSMUSG00000025359.11	ENSMUST00000054125.9	2130	11	0	114	0	-114	multi-exon	FALSE	canonical	3	48	junction_3	12.3385574521497	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGGGCTTTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	128542126	128555993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
tx.13600	chrX	+	560	3	ISM	ENSMUSG00000034480.19	ENSMUST00000037854.15	3742	27	-37	657007	26	-238340	5prime_fragment	FALSE	canonical	3	108	junction_1	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGACCTCTAATTTC	NA	False	NA	NA	False	NA	NA	NA	128650516	128704939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_128650866_128702143_128702177_128704761
tx.13601	chrX	-	1758	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	7	0	7	0	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCGTTTTAATTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	132799171	132791816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
tx.13602	chrX	+	2603	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	114	0	-5	0	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	132960077	132976612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
tx.13603	chrX	+	2039	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	101	2362	-13	-1589	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTGATATACATAATCC	NA	False	NA	NA	False	NA	NA	NA	132960046	132985206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
tx.13604	chrX	+	2028	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	44	1589	16	-1589	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTGATATACATAATCC	NA	False	NA	NA	False	NA	NA	NA	132959979	132985206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
tx.13605	chrX	-	3053	13	FSM	ENSMUSG00000067369.13	ENSMUST00000087541.12	3119	13	66	0	4	0	multi-exon	TRUE	canonical	1	13	junction_4	11.7686022959398	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTATCTCTAGTCCATG	NA	False	NA	NA	False	NA	NA	NA	133177665	133123843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
tx.13606	chrX	-	918	5	ISM	ENSMUSG00000067369.13	ENSMUST00000145066.2	3237	12	-13	39387	-13	5	5prime_fragment	FALSE	canonical	3	42	junction_1	5.7227615711298	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCCGCATTGTCAT	NA	False	NA	NA	False	NA	NA	NA	133177689	133163231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
tx.13607	chrX	-	1756	4	NIC	ENSMUSG00000067369.13	novel	4099	12	NA	NA	-9	5	intron_retention	FALSE	canonical	3	48	junction_1	4.32049379893857	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCCGCATTGTCAT	NA	False	NA	NA	False	NA	NA	NA	133177685	133163231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_133164611_133167009_133167065_133168079_133168311_133177594
tx.13608	chrX	+	1753	2	FSM	ENSMUSG00000033578.8	ENSMUST00000037687.8	1918	2	165	0	165	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGGTGTGGATATGGA	NA	False	NA	NA	False	NA	NA	NA	133196138	133206718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_133196379_133205205
tx.13609	chrX	+	3631	21	NIC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	20	-3	intron_retention	FALSE	canonical	3	156	junction_7	44.2429655425583	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGGGTATTTCCGAATT	NA	False	NA	NA	False	NA	NA	NA	133208852	133263382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
tx.1361	chr10	-	898	4	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	22559	-4	9531	4	3prime_fragment	FALSE	canonical	3	88	junction_2	12.5521135891752	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGCAAGGTTCTGAGAAT	8848	False	NA	NA	False	NA	NA	NA	128557385	128555998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046
tx.13610	chrX	+	3170	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	61	-4	-10	4	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGAATTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	133208893	133263392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
tx.13611	chrX	-	1827	13	NIC	ENSMUSG00000009596.10	novel	1933	13	NA	NA	4	6	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	5.1010619809343	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTCTAATTTCTAACAAG	NA	False	NA	NA	False	NA	NA	NA	133377235	133360860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371236_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
tx.13612	chrX	-	1232	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	197	-8	197	8	multi-exon	FALSE	canonical	3	1175	junction_1	0	340	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGAGGCTTTCTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	133442417	133437996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_133439017_133442205
tx.13613	chrX	+	466	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	17	0	17	0	multi-exon	FALSE	canonical	3	10431	junction_4	1336.12412877696	5590	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	133486419	133488805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
tx.13614	chrX	-	1415	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	22	1578	22	-1578	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTTTTCAACATAGGCT	NA	False	NA	NA	False	NA	NA	NA	133501732	133490512	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
tx.13615	chrX	+	2375	3	FSM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	57	-6	11	0	multi-exon	FALSE	canonical	3	597	junction_2	148.5	236	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	NA	NA	NA	133501984	133507809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_133502083_133503440_133503512_133505603
tx.13616	chrX	+	2420	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	-50	-6	11	0	multi-exon	FALSE	canonical	3	164	junction_3	339.283886377699	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	NA	NA	NA	133501984	133507809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
tx.13617	chrX	+	2281	4	FSM	ENSMUSG00000033460.15	ENSMUST00000051256.10	2253	4	-28	0	-21	0	multi-exon	FALSE	canonical	3	48	junction_2	53.7463177033243	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	133618690	133622666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_133618800_133619668_133619858_133620375_133620475_133620782
tx.13618	chrX	+	2153	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	-59	-9	-9	0	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	133618702	133622666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
tx.13619	chrX	+	2114	4	NNC	ENSMUSG00000033460.15	novel	2179	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_3	34.8839345385363	38	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	133618700	133622666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_133618800_133619668_133619742_133620375_133620475_133620823
tx.1362	chr10	-	2818	24	FSM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	16	0	16	0	multi-exon	FALSE	canonical	3	46	junction_14	14.5196561901106	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	10007	False	NA	NA	False	NA	NA	NA	128579928	128556002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
tx.13620	chrX	+	2205	5	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	54.8925085963467	33	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	133618702	133622666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620823
tx.13621	chrX	+	3376	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	-17	-32	-17	2	multi-exon	FALSE	canonical	2	7	junction_1	4.81534007106456	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTAGAGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	133657326	133662206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
tx.13622	chrX	-	3441	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	227	-2	2	0	multi-exon	FALSE	canonical	3	17	junction_5	6.60302960768767	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	133709743	133704893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
tx.13623	chrX	-	2344	22	FSM	ENSMUSG00000009941.11	ENSMUST00000113189.8	2375	22	34	-3	34	1	multi-exon	TRUE	canonical	3	15	junction_3	7.21770310384392	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGAAGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	133865469	133845273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_133845538_133845640_133845702_133850435_133850616_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
tx.13624	chrX	-	2402	22	FSM	ENSMUSG00000009941.11	ENSMUST00000010085.4	2393	22	-8	-1	-8	-1	multi-exon	FALSE	canonical	3	19	junction_3	6.66632652193486	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTCTTGAAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	133865511	133845275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_133845538_133845640_133845702_133850435_133850634_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
tx.13625	chrX	-	3833	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	26	-161	26	161	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134078355	134068211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
tx.13626	chrX	+	3832	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	19	-174	19	174	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134334602	134344753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
tx.13627	chrX	+	3854	5	FSM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	5	-161	5	161	multi-exon	FALSE	canonical	3	112	junction_2	53.6516542149448	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134395341	134405504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_134395469_134395666_134395786_134400016_134400317_134401619_134402205_134402781
tx.13628	chrX	-	499	5	FSM	ENSMUSG00000060726.11	ENSMUST00000113154.8	544	5	39	6	39	-6	multi-exon	FALSE	canonical	3	7	junction_4	4.9180788932265	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTTTTGGGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	134625971	134619421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_134619503_134620414_134620520_134621315_134621402_134624106_134624186_134625823
tx.13629	chrX	+	2836	4	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	-22	6	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	31.6789449880446	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCCAGTTCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	134643459	134648077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134645667
tx.1363	chr10	+	1169	3	FSM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	-10	-1	-10	0	multi-exon	FALSE	canonical	3	275	junction_1	26	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCAGGCTTTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	128583747	128602433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128583868_128601015_128601110_128601478
tx.13630	chrX	+	885	6	FSM	ENSMUSG00000043384.16	ENSMUST00000149595.8	837	6	-22	-26	-22	26	multi-exon	TRUE	canonical	3	40	junction_5	28.5629130167075	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCAACCACAGTTTC	NA	False	NA	NA	False	NA	NA	NA	134643459	134662765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134662477
tx.13631	chrX	+	2811	4	FSM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	-26	-6	-26	6	multi-exon	FALSE	canonical	3	91	junction_3	8.05536398239638	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCCAGTTCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	134643455	134648077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134645667
tx.13632	chrX	+	2782	5	FSM	ENSMUSG00000072964.15	ENSMUST00000068755.14	2823	5	35	6	35	-3	multi-exon	FALSE	canonical	3	24	junction_1	79.1296404642407	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACATTGTGTGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	134786636	134791824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_134786847_134787593_134787676_134788009_134788067_134789120_134789229_134789499
tx.13633	chrX	+	2737	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	76	-1	-56	1	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGTTTGTGTATAT	NA	False	NA	NA	False	NA	NA	NA	134786675	134791828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
tx.13634	chrX	-	821	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	80	2	80	-2	multi-exon	FALSE	canonical	3	901	junction_2	34	926	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTAGTTCTTTAAA	4236	False	NA	NA	False	NA	NA	NA	134968905	134967314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_134967957_134968348_134968422_134968799
tx.13635	chrX	-	3074	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_19	15.6232999075099	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	NA	NA	NA	134985992	134972851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
tx.13636	chrX	+	788	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	49	0	49	0	multi-exon	FALSE	canonical	3	2369	junction_2	964	2628	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCAGTCATCTTCT	NA	False	NA	NA	False	NA	NA	NA	135039793	135041192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_135039916_135040271_135040349_135040603
tx.13637	chrX	-	1130	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	120	0	-6	0	multi-exon	FALSE	canonical	3	703	junction_2	29	663	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTTAAGACTTGGTC	NA	False	NA	NA	False	NA	NA	NA	135072971	135070829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_135071799_135072384_135072455_135072880
tx.13638	chrX	-	811	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	55	0	-15	0	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	5183	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	NA	False	NA	NA	NA	135116207	135114720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_135115333_135115652_135115730_135116085
tx.13639	chrX	+	1005	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	11	3	11	-3	multi-exon	FALSE	canonical	3	2732	junction_2	36	1274	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCAACAGCCCATCAAT	NA	False	NA	NA	False	NA	NA	NA	135145838	135147885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_135145977_135146449_135146516_135147084
tx.1364	chr10	+	1108	3	FSM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	51	-3	-22	-1	multi-exon	FALSE	canonical	3	93	junction_1	117	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCAGGCTTTGGCT	NA	False	NA	NA	False	NA	NA	NA	128584374	128602431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128584436_128601015_128601110_128601478
tx.13640	chrX	+	837	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	35	58	-9	0	multi-exon	FALSE	canonical	3	4289	junction_2	392	1965	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTGTCCTTAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	135171044	135172669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_135171151_135171558_135171632_135172011
tx.13641	chrX	+	1190	2	FSM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	8	1605	8	-1605	multi-exon	FALSE	canonical	3	18	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTTTCTTCTGAATC	NA	False	NA	NA	False	NA	NA	NA	135608738	135610622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_135608838_135609531
tx.13642	chrX	-	1802	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	68	-11	-8	0	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	320	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	135642033	135633690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
tx.13643	chrX	-	1821	4	FSM	ENSMUSG00000031422.17	ENSMUST00000113097.8	1825	4	4	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	1449.75867723639	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	135644435	135633690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135644341
tx.13644	chrX	-	440	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	10	0	10	0	multi-exon	FALSE	canonical	3	182	junction_2	19	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	135858764	135856013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_135856232_135857483_135857589_135858647
tx.13645	chrX	-	438	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	10	2	10	-2	multi-exon	FALSE	canonical	3	182	junction_2	19	10	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTGTGTAACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	135858764	135856015	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_135856232_135857483_135857589_135858647
tx.13646	chrX	-	442	3	FSM	ENSMUSG00000089768.3	ENSMUST00000113071.2	439	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	31	junction_1	50	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	135877626	135874770	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_135874989_135876146_135876252_135877507
tx.13647	chrX	-	1409	5	FSM	ENSMUSG00000023443.14	ENSMUST00000074698.3	1600	5	193	-2	38	2	multi-exon	FALSE	canonical	3	9	junction_4	18.0052075800308	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTTGAGAGTTATACC	NA	False	NA	NA	False	NA	NA	NA	136020882	136016143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319_136020446_136020692
tx.13648	chrX	+	1015	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	163	0	163	0	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	881	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTTTCACGTTAACGT	NA	False	NA	NA	False	NA	NA	NA	138234594	138238918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_138235157_138237570_138237800_138238694
tx.13649	chrX	-	912	4	NNC	ENSMUSG00000086807.9	novel	712	4	NA	NA	-25	175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.18241233033047	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTTTGGAGAACGTAG	NA	False	NA	NA	False	NA	NA	NA	138258512	138248064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_138248640_138255752_138255851_138257038_138257123_138258357
tx.1365	chr10	+	3022	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	1	1110	1	646	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACATCTTCCTTCTCTTC	4017	False	NA	NA	False	NA	NA	NA	128641423	128654018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
tx.13650	chrX	-	1065	3	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	13	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCTAGAGTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	138300894	138296085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_-_138296298_138297305_138297544_138300279
tx.13651	chrX	-	1928	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-39	3	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	170.821864452417	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGAACTGGGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	138963081	138907550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138962996
tx.13652	chrX	-	1879	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	149	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	138963346	138907553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
tx.13653	chrX	+	1953	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	12	0	12	0	multi-exon	FALSE	canonical	3	1771	junction_6	191.019850626403	2609	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	NA	False	NA	NA	NA	139357373	139376889	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
tx.13654	chrX	-	1805	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	51	junction_2	112.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	NA	NA	NA	139443432	139440276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_139441857_139442853_139442906_139443259
tx.13655	chrX	-	1991	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	154	junction_2	61	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	NA	NA	NA	139443953	139440276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_139441857_139442853_139442906_139443594
tx.13656	chrX	-	1367	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	25	-2	-14	2	multi-exon	FALSE	canonical	3	80	junction_1	228.562218006389	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCAATTTCTCATTCAA	NA	False	NA	NA	False	NA	NA	NA	139857452	139849175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
tx.13657	chrX	-	1453	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	-21	-2	18	2	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	417	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCAATTTCTCATTCAA	NA	False	NA	NA	False	NA	NA	NA	139857459	139849175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
tx.13658	chrX	+	2125	13	FSM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	1	76	1	-1	multi-exon	FALSE	canonical	2	18	junction_1	12.4707992259251	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTGGTTGAGAACTAT	NA	False	NA	NA	False	NA	NA	NA	139857656	139947190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
tx.13659	chrX	+	2536	5	FSM	ENSMUSG00000042271.14	ENSMUST00000112916.9	2532	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	188	junction_1	39.4865483424419	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	141009761	141022688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_141009928_141011286_141011378_141012519_141012607_141019779_141019925_141020641
tx.1366	chr10	+	2253	2	ISM	ENSMUSG00000025354.6	ENSMUST00000219473.2	3203	4	-25	7813	4	1531	5prime_fragment	FALSE	canonical	3	336	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGGTGGATGTGAGCCA	4020	False	NA	NA	False	NA	NA	NA	128641426	128644163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128641553_128642036
tx.13660	chrX	+	2467	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	17	0	17	0	multi-exon	FALSE	canonical	3	263	junction_3	9.93310961716756	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	141011189	141022688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
tx.13661	chrX	-	4115	11	ISM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	44844	0	-17475	0	3prime_fragment	TRUE	canonical	3	142	junction_4	18.4380042303933	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	141128496	141100988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423
tx.13662	chrX	+	1586	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	211	5	-3	-5	multi-exon	FALSE	canonical	3	125	junction_3	294.754511792818	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGACTTGGCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	143101010	143108188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
tx.13663	chrX	+	1474	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	20	-1015	0	-5	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGACTTGGCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	143101018	143108188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
tx.13664	chrX	+	1017	2	ISM	ENSMUSG00000041718.17	ENSMUST00000132416.8	2608	14	23008	5	12865	0	3prime_fragment	FALSE	canonical	3	1468	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	143152738	143157441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_143152858_143156543
tx.13665	chrX	+	2046	7	FSM	ENSMUSG00000096834.8	ENSMUST00000101186.10	2026	7	-20	0	-20	0	multi-exon	TRUE	canonical	0	0	junction_1	5.30461015427985	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	147446573	147486845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_147446686_147463739_147463866_147464585_147464666_147468313_147469273_147478430_147478513_147479317_147479368_147486208
tx.13666	chrX	+	2045	7	FSM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	-20	0	-20	0	multi-exon	FALSE	canonical	1	5	junction_3	4.85626742811116	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	147665551	147707135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_147665664_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
tx.13667	chrX	+	2045	7	FSM	ENSMUSG00000094885.8	ENSMUST00000177554.2	2028	7	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_1	5.58022301426107	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	147880930	147921148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_147881040_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
tx.13668	chrX	+	2017	7	FSM	ENSMUSG00000072923.7	ENSMUST00000101181.5	1977	7	-40	0	-40	0	multi-exon	FALSE	canonical	0	0	junction_1	5.06622805119022	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	148377525	148419760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
tx.13669	chrX	+	2046	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	-17	0	-17	0	multi-exon	FALSE	canonical	1	1	junction_6	4.6785562825394	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	148567451	148609690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
tx.1367	chr10	+	2219	6	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1170	-650	-532	650	3prime_fragment	FALSE	canonical	3	291	junction_2	34.2776895370735	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	5308	False	NA	NA	False	NA	NA	NA	128642714	128654022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
tx.13670	chrX	+	2054	7	FSM	ENSMUSG00000095082.2	ENSMUST00000112740.2	2026	7	-28	0	-28	0	multi-exon	TRUE	canonical	0	0	junction_3	4.07226390762354	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	148724622	148767978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_148724743_148744867_148744994_148745713_148745794_148749452_148750412_148759566_148759649_148760454_148760505_148767341
tx.13671	chrX	-	1313	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	3	0	-1	0	multi-exon	FALSE	canonical	3	95	junction_2	83.5	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGACTTGAGAGGTATT	NA	False	NA	NA	False	NA	NA	NA	149242147	149191573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_149192597_149203337_149203438_149241957
tx.13672	chrX	-	1203	3	FSM	ENSMUSG00000041353.13	ENSMUST00000151067.8	864	3	3	-342	-1	0	multi-exon	FALSE	canonical	0	0	junction_2	131	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGACTTGAGAGGTATT	NA	False	NA	NA	False	NA	NA	NA	149242147	149191573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_149192597_149203337_149203438_149242067
tx.13673	chrX	-	1891	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	-4	-3	-4	2	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGAGTGGATATTTT	NA	False	NA	NA	False	NA	NA	NA	149371149	149354500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
tx.13674	chrX	+	2061	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	17.6227126175286	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	NA	False	NA	NA	NA	149371241	149426874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_149371339_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
tx.13675	chrX	+	1921	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	10.2058806577385	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	NA	False	NA	NA	NA	149371224	149426874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_149371339_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
tx.13676	chrX	-	2239	12	ISM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	746	0	-3	0	3prime_fragment	FALSE	canonical	3	154	junction_9	18.0545546095372	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	149595957	149589416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
tx.13677	chrX	-	2172	13	NIC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	35	junction_12	45.1259810604342	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	149595973	149589416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149595816
tx.13678	chrX	-	2103	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	4	0	4	0	multi-exon	FALSE	canonical	3	63	junction_12	38.0929965858409	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	149596699	149589416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
tx.13679	chrX	-	2557	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	57	2255	57	-2255	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAAAAGAATTTGTAAT	NA	False	NA	NA	False	NA	NA	NA	149800261	149768391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
tx.1368	chr10	-	1002	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	30	-308	-9	67	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	128657484	128654283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
tx.13680	chrX	-	1386	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	23	2387	3	0	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	407	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	NA	False	NA	NA	NA	149879516	149872476	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
tx.13681	chrX	+	1344	5	NNC	ENSMUSG00000025262.9	novel	5823	15	NA	NA	-16	-66101	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	5.22015325445528	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTGTCAGGTATTT	NA	False	NA	NA	False	NA	NA	NA	150127154	150188737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150188630
tx.13682	chrX	+	923	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	39	0	39	0	multi-exon	FALSE	canonical	3	1359	junction_1	187.651165730459	1477	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	150784879	150787438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
tx.13683	chrX	-	1504	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	6	-2	6	2	multi-exon	FALSE	canonical	3	80	junction_7	14.6816559150582	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTGTCGTAAGAGTACA	NA	False	NA	NA	False	NA	NA	NA	150799285	150787575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
tx.13684	chrX	+	2112	12	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	26	26470	26	12	5prime_fragment	TRUE	canonical	3	535	junction_3	120.372768123796	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTGACAGAGGAGCT	NA	False	NA	NA	False	NA	NA	NA	150799449	150819220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097
tx.13685	chrX	+	3923	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	44	724	44	-724	multi-exon	FALSE	canonical	3	535	junction_3	101.202320735358	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	NA	False	NA	NA	NA	150799467	150844966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
tx.13686	chrX	+	3620	23	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	45	-724	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	147.492463737996	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	NA	False	NA	NA	NA	150799468	150844966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
tx.13687	chrX	+	1172	9	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	30364	721	164	-721	3prime_fragment	FALSE	canonical	3	738	junction_4	56.7294841771014	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATCTAAATTTGATTC	2860	False	NA	NA	False	NA	NA	NA	150829787	150844969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
tx.13688	chrX	-	2046	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	650	0	26	0	multi-exon	FALSE	canonical	3	155	junction_2	16.4189930669738	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	151124771	151119850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
tx.13689	chrX	-	753	3	FSM	ENSMUSG00000056679.14	ENSMUST00000137840.2	998	3	245	0	245	0	multi-exon	FALSE	canonical	2	6	junction_1	2	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTGTTTATAGGATG	NA	False	NA	NA	False	NA	NA	NA	151151455	151150011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_151150266_151150416_151150507_151151046
tx.1369	chr10	-	1081	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-21	513	-9	67	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	339	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	128657484	128654283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
tx.13690	chrX	+	1679	9	FSM	ENSMUSG00000025333.11	ENSMUST00000026383.4	1586	9	-83	-10	-18	10	multi-exon	FALSE	canonical	3	18	junction_8	3.91910385164772	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACATGGATTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	151564898	151591652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_151565289_151568038_151568149_151569121_151569217_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236
tx.13691	chrX	+	2210	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-10	18258	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	82.4209318073995	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGAATGAGTCATCTGT	3166	False	NA	NA	False	NA	NA	NA	151922966	151973197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151972527
tx.13692	chrX	+	2043	10	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	66	18257	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	101.125884146664	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTGAATGAGTCATCTG	3248	False	NA	NA	False	NA	NA	NA	151923048	151973196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151972527
tx.13693	chrX	+	666	2	FSM	ENSMUSG00000048573.10	ENSMUST00000056754.4	666	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTCTGTCTCTGAT	NA	False	NA	NA	False	NA	NA	NA	152341588	152342425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_152341879_152342049
tx.13694	chrX	+	968	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	-28	-165	6	165	multi-exon	FALSE	canonical	3	163	junction_1	3	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACTCACTATGTAGACC	NA	False	NA	NA	False	NA	NA	NA	152506594	152512349	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_152506934_152508700_152508838_152511857
tx.13695	chrX	+	807	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	13	-32	-7	32	multi-exon	FALSE	canonical	3	149	junction_3	8.37987005998436	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAGAGCTATACGATTA	NA	False	NA	NA	False	NA	NA	NA	152506598	152524292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
tx.13696	chrX	+	722	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	0	624	0	32	multi-exon	FALSE	canonical	3	65	junction_2	49	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAGAGCTATACGATTA	NA	False	NA	NA	False	NA	NA	NA	152506605	152524292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_152506934_152508700_152508838_152524035
tx.13697	chrX	-	1716	4	NNC	ENSMUSG00000063728.11	novel	1212	3	NA	NA	-1660	358	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	3.55902608401044	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTCACTGCTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	153720643	153706649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_153708120_153709022_153709112_153718972_153719075_153720588
tx.13698	chrX	-	1769	5	Genic_Genomic	ENSMUSG00000094196.3	novel	963	1	NA	NA	-9521	377	multi-exon	FALSE	canonical	3	11	junction_3	4.5	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTAATCTCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	153742022	153731161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_-_153732567_153733511_153733601_153740339_153740441_153741158_153741264_153741953
tx.13699	chrX	-	1656	4	FSM	ENSMUSG00000079349.10	ENSMUST00000069556.4	1360	4	-9	-287	-9	3	multi-exon	FALSE	canonical	3	37	junction_1	7.03957069398096	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTAGTTTCTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	153846150	153836053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_153837456_153838390_153838480_153844474_153844576_153846086
tx.137	chr1	-	802	7	NNC	ENSMUSG00000060715.10	novel	646	9	NA	NA	-5	182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.3168032782055	19	6	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTATGGTGCCCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	53226772	53197553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_53197948_53209506_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53224373_53224450_53226712
tx.1370	chr10	-	827	3	FSM	ENSMUSG00000025353.6	ENSMUST00000217685.2	666	3	-24	-137	-9	67	multi-exon	FALSE	canonical	3	26	junction_2	430	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	128657484	128654283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128654885_128655822_128655975_128657410
tx.13700	chrX	+	1980	2	Genic_Genomic	ENSMUSG00000082560.2	novel	702	1	NA	NA	-1034	1092	multi-exon	FALSE	canonical	3	18	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTTGCCAGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	153967640	153970468	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_+_153967809_153968656
tx.13701	chrX	-	1103	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	53	6	-51	-6	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	1084	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCCTGAGCATTTTT	NA	False	NA	NA	False	NA	NA	NA	153999392	153996133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
tx.13702	chrX	+	1696	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	51	5	-11	3	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	1179	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATTGTGAGTCTCCCAT	NA	False	NA	NA	False	NA	NA	NA	154045489	154080645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
tx.13703	chrX	-	974	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	16	0	16	0	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	703	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGCCATTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	154121447	154106913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
tx.13704	chrX	-	4596	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	5	-11	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACGTTTATCATCTTCT	NA	False	NA	NA	False	NA	NA	NA	156381670	156330830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
tx.13705	chrX	-	1961	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	29	2807	-7	-2807	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCATTTTGGAATAGTA	NA	False	NA	NA	False	NA	NA	NA	156381682	156333626	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
tx.13706	chrX	-	3610	7	NNC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	174	-167	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	103.758399927695	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	NA	NA	NA	156381465	156349109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_156351813_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381306
tx.13707	chrX	-	827	3	FSM	ENSMUSG00000046873.19	ENSMUST00000152826.3	796	3	-31	0	5	0	multi-exon	FALSE	canonical	3	154	junction_1	4	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAGCAGAAATTGTCACA	NA	False	NA	NA	False	NA	NA	NA	156381670	156374052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_156374552_156376720_156376870_156381491
tx.13708	chrX	+	2764	22	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-119	298	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	12.7339779727836	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGGATTAACAGTATTG	NA	False	NA	NA	False	NA	NA	NA	158038658	158147034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_158038716_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
tx.13709	chrX	+	2749	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	29	4466	29	38	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCATTATTTTTATAGG	NA	False	NA	NA	False	NA	NA	NA	158038882	158146774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
tx.1371	chr10	-	1008	3	ISM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	1091	-67	1076	67	3prime_fragment	FALSE	canonical	3	748	junction_2	69	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	128656384	128654283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_128654885_128655822_128655975_128656129
tx.13710	chrX	+	925	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	23	4224	23	-4224	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	555	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTAAGCCCTGCCTT	5370	False	NA	NA	False	NA	NA	NA	158155196	158168700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
tx.13711	chrX	+	442	3	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	7581	4224	7581	-4224	3prime_fragment	FALSE	canonical	3	2276	junction_2	97.5	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTAAGCCCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	158162754	158168700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_158162808_158165683_158165776_158168403
tx.13712	chrX	+	1550	10	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	102	-1312	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	37.9326889224701	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAGGAAAAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	158197669	158272462	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272
tx.13713	chrX	+	2165	9	ISM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	7	26473	7	-8489	5prime_fragment	FALSE	canonical	3	412	junction_8	92.8372231381357	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGTAACTTCATTATG	NA	False	NA	NA	False	NA	NA	NA	158315670	158349604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423
tx.13714	chrX	+	1361	4	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	-37	38645	14	1860	5prime_fragment	FALSE	canonical	3	487	junction_1	64.3238334954903	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTAAAGAAGATTGCAGA	NA	False	NA	NA	False	NA	NA	NA	158315677	158336745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239
tx.13715	chrX	+	3371	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	NA	False	NA	NA	NA	158315677	158376070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
tx.13716	chrX	+	3340	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	24	2	24	-2	multi-exon	FALSE	canonical	3	339	junction_9	109.675027103931	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGTGAGAGCATTCTT	NA	False	NA	NA	False	NA	NA	NA	158315687	158376075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
tx.13717	chrX	+	3954	8	NNC	ENSMUSG00000044150.13	novel	2513	11	NA	NA	-10	10071	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_5	166.521433320465	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTTGTGTGCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	158315704	158344956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833
tx.13718	chrX	+	3183	23	ISM	ENSMUSG00000031303.9	ENSMUST00000033665.9	4348	29	84556	7	84556	-7	3prime_fragment	FALSE	canonical	3	28	junction_15	11.1129624261174	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGACTGAAGTTCCCTT	NA	False	NA	NA	False	NA	NA	NA	158855984	158906340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
tx.13719	chrX	-	2842	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	-4	10	-4	-10	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	360	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTTACAGTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	158921413	158905214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
tx.1372	chr10	+	916	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	14	-12	0	0	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	739	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	128657776	128713498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
tx.13720	chrX	+	4130	33	FSM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	0	3	0	-3	multi-exon	FALSE	canonical	3	71	junction_12	13.3855098894289	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGTCATTTGTAGACT	NA	False	NA	NA	False	NA	NA	NA	159285429	159374134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
tx.13721	chrX	+	4718	28	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14606	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	110.202171115267	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	4637	False	NA	NA	False	NA	NA	NA	159921869	160041203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
tx.13722	chrX	+	4390	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14606	7	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_14	106.161164352296	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	4637	False	NA	NA	False	NA	NA	NA	159921869	160041199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
tx.13723	chrX	+	4534	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5646	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	113.395590743203	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	NA	False	NA	NA	False	NA	NA	NA	159940099	160041199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
tx.13724	chrX	+	4783	25	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	8	-6	combination_of_known_splicesites	FALSE	canonical	3	8	junction_12	112.587095915414	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	1343	False	NA	NA	False	NA	NA	NA	159945753	160041203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_159946245_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
tx.13725	chrX	+	1947	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	0	297	0	39	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	2919	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	161543397	161561791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
tx.13726	chrX	+	1613	11	ISM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	1201	297	537	39	3prime_fragment	FALSE	canonical	3	2711	junction_2	181.912176612782	1097	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	161544598	161561791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
tx.13727	chrX	-	3803	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	61	-2	61	2	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTGTATTATTCT	NA	False	NA	NA	False	NA	NA	NA	161612389	161561912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
tx.13728	chrX	-	2074	8	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	54	4541	54	-4541	5prime_fragment	FALSE	canonical	3	89	junction_2	55.0558158339594	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTAGTCAAGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	161612396	161566455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
tx.13729	chrX	-	2713	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	88	9870	88	128	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGTTGGTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	161612362	161571784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
tx.1373	chr10	+	913	11	NIC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1288	junction_2	1269.59119798461	334	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	128657776	128713498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
tx.13730	chrX	-	2566	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	88	-129	88	128	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGTTGGTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	161612362	161571784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
tx.13731	chrX	-	2296	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	0	-209	0	209	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGTACGTATTTATA	NA	False	NA	NA	False	NA	NA	NA	161671443	161639843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
tx.13732	chrX	+	2212	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-30	1171	-3	18	multi-exon	TRUE	canonical	2	133	junction_1	30.7828415409191	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTGTGTTTTCTCCA	NA	False	NA	NA	False	NA	NA	NA	161684597	161814333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
tx.13733	chrX	+	2373	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	-266	992	-1	14	multi-exon	FALSE	canonical	2	41	junction_1	44.8724185955837	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGGTTTTGTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	161684599	161814329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
tx.13734	chrX	+	3232	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	-33	0	-30	0	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	162692107	162712542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
tx.13735	chrX	-	1590	6	FSM	ENSMUSG00000031370.13	ENSMUST00000147928.8	460	6	-103	-1027	6	978	multi-exon	FALSE	canonical	3	79	junction_5	268.200372855818	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	162741651	162735608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
tx.13736	chrX	-	1705	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-65	2227	-2	978	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	327	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	162741659	162735608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
tx.13737	chrX	-	1540	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-5	978	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	202	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	162741662	162735608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
tx.13738	chrX	-	1717	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	-3	-2	-3	2	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	162859149	162853698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
tx.13739	chrX	+	1288	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	106	205	-10	-205	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGAATGCATTATATT	NA	False	NA	NA	False	NA	NA	NA	163052532	163155802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
tx.1374	chr10	+	879	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	191	-7	-32	0	multi-exon	FALSE	canonical	3	3700	junction_1	227.971623726484	2904	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	545	False	NA	NA	False	NA	NA	NA	128745758	128748691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
tx.13740	chrX	+	1430	11	NNC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	5	-224	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	106.022827730635	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTTTGTAATGAAT	NA	False	NA	NA	False	NA	NA	NA	163052573	163155783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_163052674_163054155_163054358_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
tx.13741	chrX	+	3563	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	31	0	11	0	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	163202813	163216912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
tx.13742	chrX	+	1113	2	ISM	ENSMUSG00000031381.17	ENSMUST00000208741.2	854	6	31	8163	11	-8163	5prime_fragment	FALSE	canonical	3	206	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATGTGCTATGTGGCC	NA	False	NA	NA	False	NA	NA	NA	163202813	163206669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_163202837_163205579
tx.13743	chrX	+	3183	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	31	-2	11	0	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTCTCAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	163202813	163216909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
tx.13744	chrX	+	1138	7	FSM	ENSMUSG00000031384.3	ENSMUST00000033756.3	1139	7	3	-2	3	2	multi-exon	FALSE	canonical	0	0	junction_2	1.25830573921179	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGGTTTCTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	163289325	163322750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_163289583_163297924_163298005_163312403_163312512_163314577_163314729_163316452_163316588_163318365_163318558_163322535
tx.13745	chrX	-	4060	15	FSM	ENSMUSG00000061778.11	ENSMUST00000004715.2	2015	15	-5	-2040	3	0	multi-exon	FALSE	canonical	3	42	junction_12	10.321366781822	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	NA	NA	NA	163763336	163719164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
tx.13746	chrX	+	2864	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	90	-1	-30	1	multi-exon	TRUE	canonical	3	98	junction_5	7.72981241687015	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTTTTCTTTTACT	NA	False	NA	NA	False	NA	NA	NA	163763677	163780266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
tx.13747	chrX	+	1891	4	FSM	ENSMUSG00000040621.15	ENSMUST00000056410.11	1862	4	-35	6	-35	-4	multi-exon	FALSE	canonical	3	11	junction_1	17.1529071070248	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTATGGACTGGATTTG	NA	False	NA	NA	False	NA	NA	NA	164953414	164973502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_164953547_164961787_164961827_164963348_164963806_164972239
tx.13748	chrX	+	1351	6	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.6719040271741	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTATTCCTACATTTTT	NA	False	NA	NA	False	NA	NA	NA	164953445	164972815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_164953547_164959840_164959999_164960055_164960076_164961787_164961827_164963348_164963806_164972239
tx.13749	chrX	-	1257	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	184	6	-37	-6	multi-exon	FALSE	canonical	3	555	junction_2	7.5	161	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTACGTTGCAATGCT	NA	False	NA	NA	False	NA	NA	NA	165262679	165240254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_165241340_165245310_165245339_165262535
tx.1375	chr10	-	549	4	FSM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	2	-1	2	1	multi-exon	FALSE	canonical	3	559	junction_1	37.4788829431544	293	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGTTTGAAGGAGT	NA	False	NA	NA	False	NA	NA	NA	128759391	128755781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_128755977_128756427_128756561_128758522_128758596_128759243
tx.13750	chrX	-	617	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	151	0	-15	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	165992160	165990088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_165990532_165990932_165991048_165992101
tx.13751	chrX	-	3673	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	21	5	-18	-5	multi-exon	TRUE	canonical	3	187	junction_5	11.6535640709422	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATAGTTCTTGTCATCC	NA	False	NA	NA	False	NA	NA	NA	166165724	166129322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
tx.13752	chrX	-	2365	13	FSM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	37	-3	37	3	multi-exon	TRUE	canonical	1	2	junction_12	12.277746354912	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGAGGAGTTTTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	167456857	167437109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258_167455342_167456723
tx.13753	chrX	-	2293	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	26	-3	26	3	multi-exon	FALSE	canonical	3	28	junction_9	6.17646827325928	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGAGGAGTTTTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	167456868	167437109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
tx.13754	chrX	-	2310	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	163	0	149	0	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	168103127	168094525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
tx.13755	chrX_GL456233v2_random	-	2371	8	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_7	117.818088767457	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCTTGTTCTATTAAT	NA	False	NA	NA	False	NA	NA	NA	134086	105805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127507_133984
tx.13756	chrX_GL456233v2_random	-	1712	8	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	183	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCCAGGATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	134111	106527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
tx.13757	chrX_GL456233v2_random	+	2273	8	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_5	6.38557046817915	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAGGGTTAAATTTTC	NA	False	NA	NA	False	NA	NA	NA	251307	468931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_460904_461142_467193_467333_467938
tx.13758	chrY	+	490	4	NNC	ENSMUSG00000096768.9	novel	774	4	NA	NA	11	0	intron_retention	FALSE	canonical	2	3	junction_1	846.579523074406	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	4811	False	NA	NA	False	NA	NA	NA	90796865	90827734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrY_+_90796989_90797120_90797249_90804564_90804687_90827617
tx.13759	chrY	+	242	2	NIC	ENSMUSG00000096768.9	novel	567	3	NA	NA	7	0	intron_retention	FALSE	canonical	2	80	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	5069	False	NA	NA	False	NA	NA	NA	90797123	90827734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrY_+_90797249_90827617
tx.1376	chr10	+	3546	5	NNC	ENSMUSG00000112742.2	novel	415	3	NA	NA	-42	4676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.4693443182191	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	130378173	130412338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_130378320_130407161_130407289_130407478_130407540_130408627_130409350_130409848
tx.13760	chrY	+	330	3	NNC	ENSMUSG00000096768.9	novel	696	4	NA	NA	41	5937	intron_retention	FALSE	canonical	3	607	junction_1	705	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	5103	False	NA	NA	False	NA	NA	NA	90797157	90833671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrY_+_90797249_90804564_90804687_90833554
tx.13761	chrY	+	404	2	NNC	ENSMUSG00000096768.9	novel	774	4	NA	NA	2680	5937	at_least_one_novel_splicesite	FALSE	canonical	3	2017	junction_1	0	23	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	90804399	90833671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrY_+_90804687_90833554
tx.13762	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1304	junction_5	2022.74937646758	1109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
tx.13763	SIRV1	+	703	3	FSM	SIRV1B	SIRV108	702	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	89	junction_1	13	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10581	11606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV1_+_10792_10897_11188_11403
tx.13765	SIRV1	+	465	3	FSM	SIRV1B	SIRV109	464	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	336	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10710	11643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV1_+_10792_10882_11058_11434
tx.13766	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	583	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
tx.13767	SIRV3	-	481	3	FSM	SIRV3B	SIRV308	479	3	0	-2	0	2	multi-exon	FALSE	canonical	3	5391	junction_1	17	498	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTATGGCGGACA	NA	False	NA	NA	False	NA	NA	NA	1982	998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV3_-_1168_1532_1765_1902
tx.13768	SIRV3	+	2374	3	FSM	SIRV3A	SIRV306	2373	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	759	junction_2	1218.5	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1943	8292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV3_+_2006_4003_4081_6057
tx.13769	SIRV3	+	1808	2	FSM	SIRV3A	SIRV302	1807	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	834	junction_1	0	423	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1962	7822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV3_+_2006_6057
tx.1377	chr11	-	618	5	ISM	ENSMUSG00000023764.19	ENSMUST00000138126.8	2916	22	-21	44400	-3	6236	5prime_fragment	FALSE	canonical	3	72	junction_1	15.833114033569	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAATGTCTTGTTTCTGTT	8000	False	NA	NA	False	NA	NA	NA	3143442	3129331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
tx.13770	SIRV3	+	437	3	FSM	SIRV3A	SIRV305	436	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	1609	junction_2	828.5	451	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4002	6718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV3_+_4081_4568_4780_6570
tx.13771	SIRV3	-	591	3	FSM	SIRV3C	SIRV310	589	3	0	-2	0	2	multi-exon	FALSE	canonical	3	1245	junction_2	66	420	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTTGGGTACTGG	NA	False	NA	NA	False	NA	NA	NA	9914	8757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV3_-_8967_9189_9325_9667
tx.13772	SIRV3	-	787	3	NIC	SIRV3C	novel	796	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1377	junction_1	8.5	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	9943	8797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_SIRV3_-_8967_9189_9299_9434
tx.13773	SIRV4	+	1568	3	FSM	SIRV4C	SIRV409	1567	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	1019	junction_2	11.5	363	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	999	3403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV4_+_1347_1678_1886_2389
tx.13774	SIRV4	+	951	2	FSM	SIRV4C	SIRV410	950	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	332	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1454	2771	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV4_+_1886_2251
tx.13775	SIRV4	-	619	2	FSM	SIRV4B	SIRV406	617	2	0	-2	0	2	multi-exon	FALSE	canonical	3	2584	junction_1	0	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTAAAAATAGCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	5158	3635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV4_-_4104_5007
tx.13776	SIRV4	-	627	2	FSM	SIRV4A	SIRV405	626	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	7498	junction_1	0	609	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13938	8629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV4_-_8991_13672
tx.13777	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	3871	junction_1	2708.37786137754	734	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
tx.13778	SIRV7	-	2466	5	FSM	SIRV7A	SIRV701	2462	5	-2	-2	0	-1	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	653	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	NA	NA	NA	147925	1001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
tx.13779	chr1	+	1034	5	ISM	ENSMUSG00000025934.16	ENSMUST00000121676.8	894	8	16520	-192	3606	192	3prime_fragment	FALSE	canonical	3	69	junction_1	2	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGAGTATTCGAACATT	NA	False	NA	NA	False	NA	NA	NA	21327350	21335437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
tx.1378	chr11	-	829	5	FSM	ENSMUSG00000023764.19	ENSMUST00000118627.2	831	5	6	-4	3	4	multi-exon	FALSE	canonical	3	18	junction_1	37.5724300518346	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGCACTTTGTTATTT	8024	False	NA	NA	False	NA	NA	NA	3143418	3135563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_3135975_3136064_3136137_3137239_3137411_3138940_3139057_3143359
tx.13780	chr1	+	2329	8	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	40.1512446753471	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGCTTTTCCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	33758962	33779792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_33759102_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
tx.13781	chr1	+	2308	17	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	37628	661	273	3	3prime_fragment	FALSE	canonical	3	286	junction_11	42.0950839617882	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCAGTGGCGTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	44010802	44041499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
tx.13782	chr1	-	2362	6	FSM	ENSMUSG00000026107.12	ENSMUST00000185534.2	708	6	0	-1654	0	0	multi-exon	FALSE	canonical	1	1	junction_5	22.105203007437	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	False	NA	NA	False	NA	NA	NA	51517558	51508646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51517459
tx.13783	chr1	-	3054	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6052	False	NA	NA	False	NA	NA	NA	53336177	53228345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
tx.13784	chr1	-	2976	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	3	-422	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGTCTGCACTTTGC	NA	False	NA	NA	False	NA	NA	NA	58544111	58502351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
tx.13785	chr1	+	1449	4	ISM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	55946	2982	-1728	849	3prime_fragment	FALSE	canonical	3	105	junction_2	6.12825877028341	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTACATTATGTGATT	NA	False	NA	NA	False	NA	NA	NA	60008110	60021523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_60008257_60009644_60009871_60014041_60014163_60020567
tx.13786	chr1	+	1331	4	ISM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	0	142454	0	9976	5prime_fragment	FALSE	canonical	3	9	junction_2	6.34209919681348	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGCTTCTACCTT	NA	False	NA	NA	False	NA	NA	NA	60219757	60235033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173
tx.13787	chr1	+	6144	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	19	2201	6	1090	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCTGTGTGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	64571996	64641506	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
tx.13788	chr1	+	2974	8	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	38	-7	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	351.989331934816	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTGTT	900	False	NA	NA	False	NA	NA	NA	74545256	74569994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_74545374_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
tx.1379	chr11	+	2645	13	ISM	ENSMUSG00000020454.18	ENSMUST00000179770.8	3676	19	21657	-1	-3115	0	3prime_fragment	TRUE	canonical	3	81	junction_4	69.3350861156649	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	3174651	3194586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
tx.13791	chr1	+	1650	7	NIC	ENSMUSG00000026150.15	novel	1706	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_4	124.696520489636	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	82702638	82730111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82728240_82728326_82729305
tx.13793	chr1	+	3104	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-15	-4	0	1	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	NA	False	NA	NA	NA	86631549	86977818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
tx.13794	chr1	-	2365	5	ISM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	8050	0	-246	0	3prime_fragment	FALSE	canonical	3	166	junction_4	17.3691536926817	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	121247703	121232081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325
tx.13795	chr1	-	2131	4	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	80.4998274670339	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTTAGTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	121255482	121232084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_121233677_121234592_121234693_121247325_121247702_121255419
tx.13796	chr1	-	433	2	FSM	ENSMUSG00000102014.2	ENSMUST00000188163.2	465	2	33	-1	33	1	multi-exon	FALSE	canonical	3	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGATGAATTTAGCATAT	NA	False	NA	NA	False	NA	NA	NA	127701758	127681351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_127681691_127701664
tx.13797	chr1	+	4325	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	24	162	24	-162	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	NA	False	NA	NA	NA	127701924	127733507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
tx.13798	chr1	-	1598	10	NNC	ENSMUSG00000042349.14	novel	2867	21	NA	NA	1592	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.63279638028292	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCAGCTATGGTACCT	3520	False	NA	NA	False	NA	NA	NA	131196689	131182338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_131183076_131184623_131184696_131184853_131184961_131185637_131185735_131186918_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131196515
tx.13799	chr1	+	3533	13	FSM	ENSMUSG00000042251.13	ENSMUST00000112393.9	6900	13	20	3347	3	1738	multi-exon	FALSE	canonical	3	56	junction_3	6.31741420378799	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	131725138	131745852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
tx.138	chr1	+	1852	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	-6	64	-6	-64	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTTTTCCAAGACAG	NA	False	NA	NA	False	NA	NA	NA	53336247	53349404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
tx.1380	chr11	-	1305	8	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	1605	14	1604	-14	3prime_fragment	FALSE	canonical	3	1733	junction_5	103.695787409762	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTATTCATG	NA	False	NA	NA	False	NA	NA	NA	3214788	3199920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766
tx.13800	chr1	-	1863	5	ISM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	-3	16408	-2	1335	5prime_fragment	FALSE	canonical	3	161	junction_3	92.5834083408037	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCATCTCTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	132953097	132935499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
tx.13801	chr1	-	260	3	ISM	ENSMUSG00000054387.14	ENSMUST00000185418.2	496	5	-36	3582	-9	-3528	5prime_fragment	FALSE	canonical	3	238	junction_1	78	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCAGCAGGTGCGCAGGG	NA	False	NA	NA	False	NA	NA	NA	132953104	132940416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_132940450_132946514_132946623_132952985
tx.13802	chr1	-	3111	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	245.748087376036	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289682	134273834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283452_134288494_134288663_134289271_134289362_134289499
tx.13803	chr1	-	4047	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	39	2161	-2	0	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	NA	False	NA	NA	NA	135358198	135312210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
tx.13804	chr1	-	482	4	ISM	ENSMUSG00000041879.14	ENSMUST00000161032.8	4226	25	3	34821	3	-11230	5prime_fragment	FALSE	canonical	3	606	junction_2	21.2289111041209	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGGTGAGCGGAGAC	NA	False	NA	NA	False	NA	NA	NA	135358193	135347031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_135347177_135347728_135347816_135348029_135348092_135358005
tx.13805	chr1	+	1733	2	FSM	ENSMUSG00000041498.14	ENSMUST00000201158.2	574	2	-1156	-3	-88	3	multi-exon	FALSE	canonical	3	66	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGCTGTGATGTT	NA	False	NA	NA	False	NA	NA	NA	136395584	136399462	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_136396913_136399057
tx.13806	chr1	+	3115	2	FSM	ENSMUSG00000041483.15	ENSMUST00000047734.15	4933	2	66	1752	66	-1752	multi-exon	FALSE	canonical	3	143	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136552704	136556039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_136552790_136553009
tx.13807	chr1	-	2684	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	241	8661	-28	-1300	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAACGTAGTAAGATA	NA	False	NA	NA	False	NA	NA	NA	143578390	143483198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
tx.13808	chr1	+	496	2	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGCCTCTGTCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	151186469	151188348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_+_151186568_151187950
tx.13809	chr1	+	1523	7	FSM	ENSMUSG00000053286.12	ENSMUST00000188179.7	1567	7	95	-51	0	51	multi-exon	FALSE	canonical	3	157	junction_2	23.1732604525129	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTTCATATCTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	151304387	151319510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997
tx.1381	chr11	-	1537	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-5	14	-5	-14	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	1688	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTATTCATG	NA	False	NA	NA	False	NA	NA	NA	3216398	3199920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
tx.13810	chr1	+	4140	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-208	2599	-21	-2	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGACTTTACCAATGTA	NA	False	NA	NA	False	NA	NA	NA	151446915	151595091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
tx.13811	chr1	-	512	3	Antisense	novelGene_ENSMUSG00000042751.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTCCTGTACTTGGG	3350	False	NA	NA	False	NA	NA	NA	152867858	152866077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr1_-_152866430_152867236_152867319_152867780
tx.13812	chr1	+	1700	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	-12	-2231	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTGTCCTGCCTGGAG	NA	False	NA	NA	False	NA	NA	NA	152969213	152992679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
tx.13813	chr1	+	944	2	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	71	3522	intron_retention	FALSE	canonical	3	42	junction_1	0	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCGTCCCACATTCTT	NA	False	NA	NA	False	NA	NA	NA	152969296	152973865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_152969860_152973484
tx.13814	chr1	-	3573	15	FSM	ENSMUSG00000026469.15	ENSMUST00000027741.12	7492	15	-80	3999	-2	-718	multi-exon	FALSE	canonical	2	7	junction_5	3.69569523436472	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTTTCTTCATAAATTC	NA	False	NA	NA	False	NA	NA	NA	155293155	155155445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
tx.13818	chr1	-	1755	7	FSM	ENSMUSG00000015961.9	ENSMUST00000161808.2	1733	7	-8	-14	2	14	multi-exon	FALSE	canonical	3	944	junction_3	54.6130326326357	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	177624075	177602169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
tx.13819	chr1	+	391	3	ISM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	2613	3	2613	-3	3prime_fragment	FALSE	canonical	3	422	junction_2	50.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATTGTTTTACATGAAA	NA	False	NA	NA	False	NA	NA	NA	178149307	178150255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_178149425_178149506_178149571_178150045
tx.1382	chr11	+	3409	5	FSM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	-232	-4	-214	4	multi-exon	TRUE	canonical	0	0	junction_4	189.564467925822	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTCCCCCGAGTCCA	6238	False	NA	NA	False	NA	NA	NA	3240224	3259087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
tx.13820	chr1	+	2987	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	173	0	-11	0	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	NA	False	NA	NA	NA	180468887	180518252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
tx.13823	chr1	+	2968	6	FSM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	-8	1919	-1	-1919	multi-exon	FALSE	canonical	3	202	junction_5	16.7164589551735	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCATTTTTACTGTAT	NA	False	NA	NA	False	NA	NA	NA	190795219	190816752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367
tx.13825	chr1	-	4073	15	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	-1	-125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	130.983894476554	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAGATGGCTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	191307657	191269601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295274_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
tx.13826	chr1	-	4363	11	ISM	ENSMUSG00000037474.14	ENSMUST00000195765.6	3174	15	-40	10709	-10	15	5prime_fragment	FALSE	canonical	3	463	junction_3	24.609144641779	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATAGGTCATGTGATA	NA	False	NA	NA	False	NA	NA	NA	191307666	191281925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
tx.13827	chr10	+	1153	3	ISM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	-51	5631	-51	187	5prime_fragment	FALSE	canonical	3	1052	junction_2	17	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGACGAGGAAGAAGGGGA	NA	False	NA	NA	False	NA	NA	NA	4216328	4303839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_4216669_4263742_4263858_4303141
tx.13828	chr10	-	3514	3	FSM	ENSMUSG00000019763.12	ENSMUST00000155172.8	776	3	-6	-2732	0	1583	multi-exon	FALSE	canonical	3	35	junction_2	63	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGAAAGAGGGAGGGGG	5749	False	NA	NA	False	NA	NA	NA	4382301	4374510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_4377692_4379076_4379172_4382063
tx.13829	chr10	-	1280	2	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	8422416	8419966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_-_8421034_8422203
tx.1383	chr11	+	2651	3	FSM	ENSMUSG00000020453.18	ENSMUST00000094471.10	2930	3	277	2	-169	-2	multi-exon	FALSE	canonical	3	69	junction_2	176	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGGCTTTGTGTGTT	6283	False	NA	NA	False	NA	NA	NA	3240269	3245427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_3241885_3243279_3243344_3244455
tx.13830	chr10	-	2383	11	ISM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-20	73098	-20	-54222	5prime_fragment	FALSE	canonical	3	61	junction_10	19.9789889634085	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCCTTGTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	12424643	12331031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
tx.13831	chr10	+	655	2	FSM	ENSMUSG00000019977.17	ENSMUST00000220392.2	641	2	328	-342	328	2	multi-exon	FALSE	canonical	3	1084	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	8145	False	NA	NA	False	NA	NA	NA	21243627	21244784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_21243686_21244187
tx.13832	chr10	+	1314	7	NNC	ENSMUSG00000078452.11	novel	1271	7	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	16.5672032106274	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	22237771	22250038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_22237831_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
tx.13833	chr10	+	1541	7	ISM	ENSMUSG00000019984.17	ENSMUST00000176285.2	3226	18	17369	-237	14853	-203	3prime_fragment	FALSE	canonical	2	41	junction_5	12.2020034784821	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCATACTCTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	24781717	24789155	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
tx.13834	chr10	-	2737	12	FSM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	-12	2	1	-2	multi-exon	FALSE	canonical	3	28	junction_7	20.4676725553911	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTTGTATTATTGAA	NA	False	NA	NA	False	NA	NA	NA	34294547	34179606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
tx.13835	chr10	+	2969	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	13	-1	13	1	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTTTTTGGTCACTGT	NA	False	NA	NA	False	NA	NA	NA	43777815	43823859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
tx.13836	chr10	+	668	3	FSM	ENSMUSG00000112132.2	ENSMUST00000218737.2	1855	3	-34	1221	-34	-1221	multi-exon	FALSE	canonical	3	22	junction_1	4.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTCTT	5660	False	NA	NA	False	NA	NA	NA	53285943	53299147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_53286053_53297604_53297685_53298668
tx.13837	chr10	+	3234	5	FSM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	23	junction_1	4.84767985741633	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGTGCTTGGTGTCT	1756	False	NA	NA	False	NA	NA	NA	61311561	61418570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826_61383995_61415908
tx.13839	chr10	+	3098	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-6	-6	6	0	multi-exon	FALSE	canonical	3	116	junction_1	25.5706741209535	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	61551095	61574432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
tx.1384	chr11	+	3268	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-150	0	-150	0	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6302	False	NA	NA	False	NA	NA	NA	3240288	3259083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
tx.13842	chr10	+	3861	26	FSM	ENSMUSG00000020064.10	ENSMUST00000219577.2	3914	26	-112	165	1	-93	multi-exon	FALSE	canonical	3	20	junction_16	90.360929610092	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTGCATATTTCGGAAA	NA	False	NA	NA	False	NA	NA	NA	63079589	63153492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
tx.13844	chr10	-	1089	2	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTCTTGTGGGTGATT	NA	False	NA	NA	False	NA	NA	NA	74553758	74550608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_-_74551462_74553522
tx.13845	chr10	-	1216	2	NIC	ENSMUSG00000050157.7	novel	714	7	NA	NA	571	-557	intron_retention	FALSE	canonical	3	38	junction_1	0	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	5548	False	NA	NA	False	NA	NA	NA	75775874	75774566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_75775673_75775764
tx.13846	chr10	-	423	3	FSM	ENSMUSG00000001211.16	ENSMUST00000146296.2	788	3	387	-22	387	19	multi-exon	FALSE	canonical	3	488	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATTTTTCTTATTAACT	NA	False	NA	NA	False	NA	NA	NA	78113883	78109425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_78109610_78109905_78110105_78113843
tx.13847	chr10	-	1365	6	NIC	ENSMUSG00000042570.15	novel	2562	14	NA	NA	-306	0	intron_retention	FALSE	canonical	3	14	junction_1	84.3578093598927	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	NA	False	NA	NA	NA	79380910	79376079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_79377034_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878
tx.13848	chr10	-	940	9	ISM	ENSMUSG00000020329.13	ENSMUST00000161662.8	1287	11	1161	-5	418	1	3prime_fragment	TRUE	canonical	3	141	junction_6	13.9014387744578	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCGCTCGGCGCCAATG	NA	False	NA	NA	False	NA	NA	NA	79574047	79571955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864
tx.13849	chr10	+	2450	8	FSM	ENSMUSG00000035863.15	ENSMUST00000105379.3	2519	8	88	-19	-7	19	multi-exon	FALSE	canonical	3	161	junction_7	12.869835005206	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGAGCCAGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	79629493	79656749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79654874
tx.1385	chr11	+	1765	3	ISM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	2748	0	319	0	3prime_fragment	FALSE	canonical	3	276	junction_2	71	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	9200	False	NA	NA	False	NA	NA	NA	3243186	3259083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_3243344_3249033_3249206_3257647
tx.13850	chr10	+	816	5	ISM	ENSMUSG00000035722.16	ENSMUST00000043866.8	6590	46	16255	-4	16255	0	3prime_fragment	FALSE	canonical	3	44	junction_1	9.35414346693485	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	8808	False	NA	NA	False	NA	NA	NA	79849703	79851406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
tx.13851	chr10	+	593	3	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	17030	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	9583	False	NA	NA	False	NA	NA	NA	79850478	79851406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_79850564_79850780_79851022_79851139
tx.13852	chr10	-	1227	3	ISM	ENSMUSG00000035673.11	ENSMUST00000218630.2	3903	32	42767	-774	16980	-5	intron_retention	FALSE	canonical	3	152	junction_1	18	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGTGGCCTACAG	NA	False	NA	NA	False	NA	NA	NA	79894254	79892830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_79893699_79893789_79893981_79894086
tx.13853	chr10	-	796	6	NNC	ENSMUSG00000020150.14	novel	988	6	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	11.4821600755259	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGGTTGGTTGGCAGT	9240	False	NA	NA	False	NA	NA	NA	80096855	80093987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096752
tx.13854	chr10	+	2044	12	FSM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	-53	3	5	-3	multi-exon	FALSE	canonical	3	126	junction_4	263.9061002555	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGAGTGCTGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	80100854	80124239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
tx.13855	chr10	-	817	5	ISM	ENSMUSG00000034917.9	ENSMUST00000045744.7	3024	21	16476	-7	5326	7	3prime_fragment	FALSE	canonical	3	139	junction_4	10.3289641300568	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGACTGAGGACTCTTT	NA	False	NA	NA	False	NA	NA	NA	81110625	81109033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413
tx.13856	chr10	-	2942	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	345	junction_12	32.4987179234299	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCAGGTGTCCTGA	NA	False	NA	NA	False	NA	NA	NA	81332190	81322291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
tx.13857	chr10	+	508	4	FSM	ENSMUSG00000078435.6	ENSMUST00000201286.4	2634	4	-15	2141	-15	-1087	multi-exon	FALSE	canonical	1	5	junction_2	1.24721912892465	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGGTAAATCCTTTC	NA	False	NA	NA	False	NA	NA	NA	81963831	81986758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_81963933_81974086_81974214_81986050_81986112_81986539
tx.1386	chr11	+	1870	4	FSM	ENSMUSG00000034614.15	ENSMUST00000136474.2	617	4	26	-1279	26	0	multi-exon	FALSE	canonical	2	2	junction_1	6.0184900284226	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGTGGTGATGAGG	NA	False	NA	NA	False	NA	NA	NA	3282476	3292971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_3282615_3283208_3283413_3283504_3283584_3291522
tx.13861	chr10	+	839	2	Antisense	novelGene_ENSMUSG00000020227.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAAACTTAAGAGATAGG	3653	False	NA	NA	False	NA	NA	NA	119996620	120000670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_119996686_119999896
tx.13862	chr10	+	2126	8	ISM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	123629	3255	-8833	1091	3prime_fragment	FALSE	canonical	3	22	junction_1	4.03049599419025	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCATTGTGATGTTCC	NA	False	NA	NA	False	NA	NA	NA	122638315	122778445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
tx.13863	chr10	+	1626	4	NNC	ENSMUSG00000047631.5	novel	1930	2	NA	NA	-5380	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.18993502999218	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCATTCATATCCTCAA	1565	False	NA	NA	False	NA	NA	NA	128098485	128106031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_128098581_128104009_128104295_128104560_128104639_128104863
tx.13864	chr11	+	1857	4	ISM	ENSMUSG00000020453.18_ENSMUSG00000084941.2	ENSMUST00000123983.8	1249	5	1728	-941	319	0	3prime_fragment	FALSE	canonical	1	7	junction_2	115.014008808589	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	9200	False	NA	NA	False	NA	NA	NA	3243186	3259083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_3243344_3244455_3244548_3249033_3249206_3257647
tx.13865	chr11	-	2429	15	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-52	9596	-52	7	5prime_fragment	FALSE	canonical	3	334	junction_11	18.239338512889	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCCCAAGGCGTCACC	8964	False	NA	NA	False	NA	NA	NA	4799417	4731929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
tx.13866	chr11	+	915	5	NNC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	-4	-1196	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	35.5	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGACATTTTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	5712124	5730680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_5712241_5715508_5715572_5718888_5719073_5719166_5719244_5730205
tx.13867	chr11	+	2737	2	NNC	ENSMUSG00000078970.6	novel	2002	8	NA	NA	12	-18108	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCTCCAAACCCTATG	2483	False	NA	NA	False	NA	NA	NA	17161929	17164806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_17164584_17164723
tx.13868	chr11	-	618	2	Antisense	novelGene_ENSMUSG00000086256.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTTGGTTCCATTTC	NA	False	NA	NA	False	NA	NA	NA	22571132	22550330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_-_22550607_22570790
tx.13869	chr11	+	880	2	FSM	ENSMUSG00000085665.2	ENSMUST00000128996.2	3105	2	-90	2315	-90	-2315	multi-exon	FALSE	canonical	3	13	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCCTTGTGATTGCACA	6919	False	NA	NA	False	NA	NA	NA	23017907	23023259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_23018407_23022878
tx.1387	chr11	-	2261	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	32	1221	32	-1221	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	NA	False	NA	NA	False	NA	NA	NA	3359142	3295476	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
tx.13870	chr11	-	3090	3	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	52	634	intron_retention	FALSE	canonical	3	449	junction_2	6	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCAGTGTTGAATTT	NA	False	NA	NA	False	NA	NA	NA	23615907	23598821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_23601056_23605435_23606131_23615746
tx.13871	chr11	-	3750	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	-3	0	-3	0	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTCTTTAATTTTTT	1266	False	NA	NA	False	NA	NA	NA	23845256	23812645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
tx.13872	chr11	+	1389	6	ISM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	25010	-557	17571	557	3prime_fragment	FALSE	canonical	3	581	junction_3	21.8229237271269	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGTTCCTTTTTATAA	NA	False	NA	NA	False	NA	NA	NA	29105757	29112385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
tx.13873	chr11	-	1147	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	243	4	85	-4	multi-exon	FALSE	canonical	3	568	junction_1	23.4141457717813	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTGTTTGACGATCTT	NA	False	NA	NA	False	NA	NA	NA	31621642	31615184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
tx.13874	chr11	+	2109	3	NIC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	-8	2	intron_retention	FALSE	canonical	3	350	junction_1	6	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	NA	False	NA	NA	NA	32176496	32182024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_32177950_32179848_32180054_32181573
tx.13875	chr11	-	1388	4	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	11263	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.114467903965	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTCATTTGTCCCT	NA	False	NA	NA	False	NA	NA	NA	35733118	35729225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35732932
tx.13876	chr11	-	1123	3	ISM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	32	3223	32	-2685	5prime_fragment	FALSE	canonical	3	711	junction_1	20.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAAGATGCAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	40646106	40642601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_40643185_40644634_40644896_40645827
tx.13877	chr11	+	3940	4	FSM	ENSMUSG00000046311.14	ENSMUST00000109198.8	3872	4	164	-232	-29	-24	multi-exon	FALSE	canonical	3	79	junction_1	17.4547032821147	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1330	False	NA	NA	False	NA	NA	NA	49094282	49109612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105890
tx.13878	chr11	+	1244	7	NIC	ENSMUSG00000007850.17	novel	2427	15	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	161.388162170863	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	50273795	50277355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
tx.13879	chr11	-	2481	18	NIC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-58	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	12.7347167373532	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTCCAGCTTGCTT	747	False	NA	NA	False	NA	NA	NA	50312876	50280111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
tx.1388	chr11	-	3490	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	0	203	0	-203	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTTGGCCACTTTTC	9814	False	NA	NA	False	NA	NA	NA	3321376	3294458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
tx.13880	chr11	+	2557	21	FSM	ENSMUSG00000020333.18	ENSMUST00000093106.12	5804	21	26	3221	26	0	multi-exon	FALSE	canonical	3	16	junction_10	11.8346947573649	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATATTGTACTTAATT	NA	False	NA	NA	False	NA	NA	NA	54194649	54252361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
tx.13881	chr11	+	3128	9	ISM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	-11	25192	-11	-9662	5prime_fragment	TRUE	canonical	3	98	junction_5	6.89995470999629	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAATAGATTTCTTAGAA	1965	False	NA	NA	False	NA	NA	NA	54329013	54383869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628
tx.13882	chr11	-	2714	18	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_17	40.9030417393305	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3626	False	NA	NA	False	NA	NA	NA	54846904	54801612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
tx.13883	chr11	-	1294	13	ISM	ENSMUSG00000018340.14	ENSMUST00000148298.2	2096	20	-22	8633	8	-8633	5prime_fragment	FALSE	canonical	3	438	junction_8	50.195451321144	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAGGTCGATCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	54924263	54890408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
tx.13884	chr11	-	2136	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	-22	1	-20	-1	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTGTCCCGGGTGATG	3836	False	NA	NA	False	NA	NA	NA	55310746	55285326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
tx.13885	chr11	-	1655	7	ISM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	13347	0	2158	0	3prime_fragment	FALSE	canonical	3	449	junction_5	27.2503822603158	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	NA	NA	NA	57396096	57373818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059
tx.13886	chr11	-	1620	6	ISM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	18810	0	7621	0	3prime_fragment	TRUE	canonical	3	449	junction_5	29.7294466816993	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	NA	NA	NA	57390633	57373818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551
tx.13887	chr11	+	1927	2	ISM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-93	5367	10	-5353	intron_retention	FALSE	canonical	3	82	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGATAAGGTTTGAAAGA	7683	False	NA	NA	False	NA	NA	NA	58197904	58200086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_58198083_58198337
tx.13888	chr11	-	476	3	FSM	ENSMUSG00000049755.15	ENSMUST00000130217.2	423	3	-48	-5	-16	5	multi-exon	FALSE	canonical	3	16	junction_1	4	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAAAGTATTCAACAGTC	599	False	NA	NA	False	NA	NA	NA	58214188	58210558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_58210781_58213394_58213556_58214095
tx.13889	chr11	-	1945	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	19	2057	19	-2057	multi-exon	FALSE	canonical	3	10	junction_1	4.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAGACCTCTTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	59054546	59048251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59049486_59049663_59050005_59054176
tx.1389	chr11	-	916	5	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	7429	1221	4105	-1221	3prime_fragment	FALSE	canonical	3	202	junction_1	18.3354165483089	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	NA	False	NA	NA	False	NA	NA	NA	3298712	3295476	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593
tx.13890	chr11	-	1930	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	9	3	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	132.4259793243	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGAGCCGGGTCTATA	NA	False	NA	NA	False	NA	NA	NA	59340816	59297966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333668_59340740
tx.13891	chr11	-	3638	10	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	32.4200821774878	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	NA	False	NA	NA	NA	59397047	59376345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
tx.13892	chr11	-	2849	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-99	40	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	74.517848346703	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	59700636	59682575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700525
tx.13893	chr11	-	904	6	NIC	ENSMUSG00000000301.17	novel	961	7	NA	NA	-46	-3	combination_of_known_junctions	TRUE	canonical	1	2	junction_5	14.8942942095287	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTCTGGTCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	59937361	59861442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59937165
tx.13894	chr11	-	1643	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	131.387249666777	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATCTTTGGTCTAAGCA	NA	False	NA	NA	False	NA	NA	NA	60307882	60291454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
tx.13895	chr11	+	1099	7	ISM	ENSMUSG00000019102.11	ENSMUST00000019246.4	1729	11	5778	3	5778	-3	3prime_fragment	FALSE	canonical	2	9	junction_5	4.89897948556636	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTGCATGCAATGCTTCT	NA	False	NA	NA	False	NA	NA	NA	61105348	61109244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
tx.13896	chr11	+	3831	6	NIC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	25	1198	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	7.07106781186548	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGGTTTGAATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	61967947	62030547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
tx.13897	chr11	+	2263	7	NNC	ENSMUSG00000018347.17	novel	2302	8	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_5	10.077477638554	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTGTAGCTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	65698005	65720065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713653_65713765_65718867
tx.13898	chr11	+	2839	17	ISM	ENSMUSG00000020908.15	ENSMUST00000108689.8	6031	41	15143	0	15143	0	3prime_fragment	TRUE	canonical	2	11	junction_1	5.51949669354009	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGTTTTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	66984268	66993112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
tx.13899	chr11	+	2526	14	FSM	ENSMUSG00000018470.9	ENSMUST00000018614.3	2538	14	6	6	6	-6	multi-exon	FALSE	canonical	3	22	junction_1	7.85293824331087	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGACCACGTCTGAA	NA	False	NA	NA	False	NA	NA	NA	69217089	69223862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
tx.139	chr1	+	1666	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	20	182	-10	-6	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	NA	False	NA	NA	NA	53352802	53365320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
tx.1390	chr11	-	2405	4	ISM	ENSMUSG00000020451.18	ENSMUST00000101640.10	3711	16	-2	12294	-2	-365	5prime_fragment	FALSE	canonical	3	120	junction_3	71.1243043316887	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAGTCAGCAG	9812	False	NA	NA	False	NA	NA	NA	3321378	3306549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_3308299_3308994_3309105_3310450_3310587_3320968
tx.13900	chr11	-	3298	3	ISM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	196	-2656	196	969	intron_retention	FALSE	canonical	3	32	junction_2	10	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGCTCAGAATTCAT	NA	False	NA	NA	False	NA	NA	NA	69285963	69281781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_69284695_69285453_69285673_69285797
tx.13901	chr11	-	1901	8	FSM	ENSMUSG00000000320.11	ENSMUST00000108574.3	2314	8	34	379	34	-379	multi-exon	FALSE	canonical	3	24	junction_3	2.55550625999976	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGATGACATGTCACACG	7448	False	NA	NA	False	NA	NA	NA	70146133	70140167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
tx.13902	chr11	+	1512	3	ISM	ENSMUSG00000020788.16	ENSMUST00000108486.8	4540	22	27836	0	6908	0	3prime_fragment	FALSE	canonical	3	82	junction_2	6.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTAGTCTTTTCTGAGC	NA	False	NA	NA	False	NA	NA	NA	72879830	72883870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_72879914_72880300_72880374_72882514
tx.13903	chr11	+	630	4	ISM	ENSMUSG00000010554.15	ENSMUST00000010698.13	2073	11	13	30180	13	14093	5prime_fragment	FALSE	canonical	3	383	junction_2	12.328828005938	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCTTCAAGCTTCATTA	8507	False	NA	NA	False	NA	NA	NA	74661668	74678540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380
tx.13904	chr11	-	2223	8	NIC	ENSMUSG00000020832.15	novel	2131	9	NA	NA	13	0	intron_retention	FALSE	canonical	3	178	junction_6	17.7580105522975	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	77971196	77964201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
tx.13905	chr11	+	949	7	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	17	18731	-1	-258	5prime_fragment	TRUE	canonical	3	50	junction_5	6.46572158042361	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTCTGTCCACTGAG	4034	False	NA	NA	False	NA	NA	NA	83644538	83655849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711
tx.13906	chr11	-	2532	13	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	762	221	226	-221	3prime_fragment	FALSE	canonical	3	268	junction_7	78.9034219790245	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	NA	False	NA	NA	NA	84760802	84723407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
tx.13907	chr11	-	3658	12	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	226	-216	intron_retention	FALSE	canonical	3	268	junction_6	81.9556421042949	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTACATGTTTC	NA	False	NA	NA	False	NA	NA	NA	84760802	84723402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
tx.13908	chr11	-	3881	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	-14	3064	-14	-3064	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTCTTCATTGGAAT	NA	False	NA	NA	False	NA	NA	NA	86092033	85952027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
tx.13909	chr11	-	1045	5	ISM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	-1	36394	-1	-6547	5prime_fragment	TRUE	canonical	3	828	junction_4	38.4081697038534	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGACTTTCCTGTTGC	NA	False	NA	NA	False	NA	NA	NA	86648392	86621570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
tx.1391	chr11	-	1460	5	ISM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	-28	13086	-13	910	5prime_fragment	FALSE	canonical	3	97	junction_3	84.1616747694579	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGATGTGGTCATAGGA	NA	False	NA	NA	False	NA	NA	NA	3359202	3307341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
tx.13910	chr11	+	2195	16	ISM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	22	5095	22	-3965	5prime_fragment	FALSE	canonical	3	45	junction_1	23.9048112312145	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTCTCTTAGTTATAAG	NA	False	NA	NA	False	NA	NA	NA	87483009	87502033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758
tx.13911	chr11	-	4625	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	22	7	9	-7	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCACTTTCTCCCCCC	NA	False	NA	NA	False	NA	NA	NA	96720772	96708246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
tx.13912	chr11	-	1408	3	ISM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	36	7396	36	-6518	5prime_fragment	FALSE	canonical	3	58	junction_2	224.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAACAGCAAGAATGAG	NA	False	NA	NA	False	NA	NA	NA	96868501	96851562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_96852836_96854190_96854271_96868446
tx.13913	chr11	-	3426	19	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	6128	1818	6128	978	3prime_fragment	FALSE	canonical	3	859	junction_18	101.233259551919	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	97072579	97052357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450
tx.13914	chr11	+	2379	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107474.8	2380	9	1	0	1	0	multi-exon	FALSE	canonical	3	15	junction_1	86.2060576467803	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	8807	False	NA	NA	False	NA	NA	NA	98818644	98864988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
tx.13915	chr11	+	1566	5	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	6272	-8	-1069	8	3prime_fragment	FALSE	canonical	3	27	junction_1	4.63680924774785	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGACAGATGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	100312794	100315658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
tx.13916	chr11	+	1374	6	NIC	ENSMUSG00000006784.15	novel	2240	12	NA	NA	4145	0	intron_retention	FALSE	canonical	3	29	junction_1	2.60768096208106	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGACACTGTGC	2567	False	NA	NA	False	NA	NA	NA	100444517	100462789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
tx.13917	chr11	-	3022	18	FSM	ENSMUSG00000020918.15	ENSMUST00000103118.4	3046	18	18	6	2	-6	multi-exon	FALSE	canonical	3	120	junction_10	104.829867108865	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6797	False	NA	NA	False	NA	NA	NA	100603273	100595577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
tx.13918	chr11	-	828	3	NNC	ENSMUSG00000045471.5	novel	586	2	NA	NA	-719	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTTTCTGTGTGTCAA	NA	False	NA	NA	False	NA	NA	NA	100654476	100652516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_100652992_100653646_100653838_100654314
tx.13919	chr11	-	2047	17	ISM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	-69	6235	30	17	5prime_fragment	FALSE	canonical	3	434	junction_9	49.3159060927608	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGACCCCAGCTGCC	NA	False	NA	NA	False	NA	NA	NA	100830275	100785296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
tx.1392	chr11	-	2765	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	23	-1	-6	1	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTGGAGCTTGTGT	6838	False	NA	NA	False	NA	NA	NA	3402340	3365980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
tx.13920	chr11	+	2478	6	FSM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	82	0	82	0	multi-exon	FALSE	canonical	3	15	junction_1	1.93907194296653	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGACGTTGCTGGCAT	NA	False	NA	NA	False	NA	NA	NA	100960919	100968498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066
tx.13921	chr11	+	1660	11	FSM	ENSMUSG00000045007.10	ENSMUST00000043654.10	1754	11	94	0	94	0	multi-exon	TRUE	canonical	2	5	junction_5	90.3044295702044	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTTTGTTTGTGACT	1745	False	NA	NA	False	NA	NA	NA	101046826	101052613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101046995_101047273_101047387_101047578_101047747_101048277_101048347_101048608_101048689_101049834_101049962_101050882_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
tx.13922	chr11	+	886	4	FSM	ENSMUSG00000001240.14	ENSMUST00000129680.8	1178	4	294	-2	10	2	multi-exon	FALSE	canonical	2	5	junction_2	6.16441400296898	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTCCTAGTGGGGTCA	NA	False	NA	NA	False	NA	NA	NA	101137147	101139078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101137399_101137880_101137971_101138411_101138515_101138636
tx.13923	chr11	+	379	4	ISM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	48	31521	-31	141	5prime_fragment	FALSE	canonical	3	176	junction_3	11.4309521329882	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCTGAGGGAACTCTT	NA	False	NA	NA	False	NA	NA	NA	101623823	101626663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634
tx.13924	chr11	+	4292	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	50	-17	-29	17	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTTGGGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	101623825	101658201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
tx.13925	chr11	+	1959	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	NA	False	NA	NA	NA	102175736	102180063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
tx.13926	chr11	-	2148	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	4	107	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	328.11515593699	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTAAGATCTATCTATAG	NA	False	NA	NA	False	NA	NA	NA	102710001	102690297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709885
tx.13927	chr11	+	2450	9	NNC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	0	752	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	81.7370020247868	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGGTGGTGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	105017304	105031972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_105017433_105017601_105017694_105019681_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
tx.13928	chr11	-	2079	12	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	21	9	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	47.5345894069008	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCACCAGTGTTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	106084341	106054146	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
tx.13929	chr11	+	933	2	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	-481	24838	-481	-14523	5prime_fragment	FALSE	canonical	3	425	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGAAGAAAATGCGTA	NA	False	NA	NA	False	NA	NA	NA	106107270	106115127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_106107983_106114906
tx.1393	chr11	-	2769	6	NIC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	55.8161267018771	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6814	False	NA	NA	False	NA	NA	NA	3402364	3365981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3382399_3382621_3402208
tx.13930	chr11	+	1103	8	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	7307	546	-899	1	3prime_fragment	FALSE	canonical	3	234	junction_1	25.9544341695446	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	113547301	113553227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
tx.13931	chr11	+	1970	4	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	111.645271582216	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113575259	113585473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_113575538_113578599_113580048_113583220_113583329_113585337
tx.13932	chr11	+	1315	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	167	0	167	0	multi-exon	TRUE	canonical	3	1535	junction_2	51	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTTTTTGTTTTTGC	NA	False	NA	NA	False	NA	NA	NA	116325086	116329903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_116325255_116325384_116325448_116328819
tx.13933	chr11	+	2479	14	NIC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	23.8406941640727	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	NA	False	NA	NA	NA	116744299	116765538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_116744584_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
tx.13934	chr11	+	247	2	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATGACCTTGTTACACA	NA	False	NA	NA	False	NA	NA	NA	116779982	116782084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_+_116780142_116781996
tx.13935	chr11	+	2533	6	FSM	ENSMUSG00000039253.8	ENSMUST00000038096.8	2520	6	-13	0	-13	0	multi-exon	TRUE	canonical	3	26	junction_4	7.30479294709987	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAAGACTGGTATATTT	3844	False	NA	NA	False	NA	NA	NA	121312213	121322114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_121312430_121315751_121315904_121316380_121316473_121317446_121317530_121319870_121319994_121320247
tx.13936	chr12	+	825	4	NNC	ENSMUSG00000079179.10	novel	812	4	NA	NA	-52	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	79.4411032708439	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	NA	False	NA	NA	NA	3285451	3288274	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_3285930_3287346_3287413_3287590_3287661_3288063
tx.13937	chr12	+	2488	7	Fusion	ENSMUSG00000073184.5_ENSMUSG00000116705.2	novel	241	3	NA	NA	-54	953	multi-exon	TRUE	non_canonical	0	0	junction_1	11.2200217864712	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	19342759	19459694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr12_+_19342877_19454315_19454443_19454644_19454706_19456148_19456640_19457060_19457372_19457791_19457946_19458467
tx.13938	chr12	+	1352	3	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCAGAACTCTCGCG	NA	False	NA	NA	False	NA	NA	NA	30631483	30634374	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_+_30631943_30633078_30633302_30633704
tx.13939	chr12	-	2384	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	-8	1561	-6	511	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTTTAGTGCATAG	NA	False	NA	NA	False	NA	NA	NA	31549562	31536388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
tx.1394	chr11	+	707	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	6.04152298679729	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	3464866	3467351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
tx.13940	chr12	+	1304	8	NNC	ENSMUSG00000035933.6	novel	750	5	NA	NA	-57584	-28202	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	31.8093812372054	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGAAATCTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	31886535	31947819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_31886821_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31947578
tx.13941	chr12	+	1775	10	FSM	ENSMUSG00000043153.7	ENSMUST00000062041.6	2690	10	53	862	-11	-10	multi-exon	FALSE	canonical	3	10	junction_5	4.59468291736341	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAATTTCATGTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	36431570	36738581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698_36526745_36551976_36552072_36571431_36571522_36571957_36572051_36597827_36597960_36738247
tx.13942	chr12	-	1943	13	FSM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	-12	507	-12	-507	multi-exon	FALSE	canonical	2	4	junction_11	159.233493824495	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGAAGAAACTTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	40495785	40365551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40460574_40460953_40495664
tx.13943	chr12	+	1052	10	NIC	ENSMUSG00000035142.19	novel	2987	11	NA	NA	9	-1781	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	77.2930929787534	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTATGATGATTCTGTA	NA	False	NA	NA	False	NA	NA	NA	52144552	52357746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52352580_52352664_52357484
tx.13944	chr12	-	4017	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_12	54.2140181439599	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	65219354	65179507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
tx.13945	chr12	-	1027	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	82	0	-11	0	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAAGCAGCATGGTTGG	NA	False	NA	NA	False	NA	NA	NA	69629802	69624401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
tx.13946	chr12	+	5813	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTTTCTATGCATTA	1798	False	NA	NA	False	NA	NA	NA	71877846	72039107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
tx.13947	chr12	+	1051	3	ISM	ENSMUSG00000052609.10	ENSMUST00000218427.2	4815	6	949	3942	949	-2136	internal_fragment	FALSE	canonical	3	68	junction_1	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCATCCGTCGGCGGGA	NA	False	NA	NA	False	NA	NA	NA	76619272	76623320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_76619520_76620020_76620135_76622630
tx.13948	chr12	-	2066	6	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-26	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.3032186618072	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	77009001	76984045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008036_77008064_77008763
tx.13949	chr12	+	3213	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7383	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.4429327540028	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	81066198	81233188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
tx.1395	chr11	+	499	4	ISM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	1392	3	1392	0	3prime_fragment	FALSE	canonical	3	143	junction_3	5.71547606649408	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCGGAGTCTCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	3466258	3467348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_3466297_3466485_3466521_3466841_3466921_3467001
tx.13950	chr12	-	3326	3	FSM	ENSMUSG00000090935.11	ENSMUST00000164431.2	3305	3	-18	-3	-6	3	multi-exon	FALSE	canonical	3	34	junction_2	56.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTGTTTCCTTTTC	NA	False	NA	NA	False	NA	NA	NA	81579691	81545912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_81548941_81551317_81551414_81579489
tx.13951	chr12	-	1963	4	ISM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	51397	573	51096	456	3prime_fragment	FALSE	canonical	3	52	junction_2	4.54606056566195	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCTCGTGTCCTAAG	4596	False	NA	NA	False	NA	NA	NA	81776552	81768356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456
tx.13952	chr12	-	3400	11	ISM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	2310	0	775	0	3prime_fragment	FALSE	canonical	3	101	junction_10	9.82293235240883	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	False	NA	NA	False	NA	NA	NA	83641686	83593622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171
tx.13953	chr12	-	3001	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	4	1031	4	215	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCCCTCTCCGACTGCT	NA	False	NA	NA	False	NA	NA	NA	83643992	83594653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
tx.13954	chr12	+	1577	9	FSM	ENSMUSG00000042472.12	ENSMUST00000220931.2	1569	9	-5	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_8	68.4233147399335	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTTGGTTTTTGTTTGG	1853	False	NA	NA	False	NA	NA	NA	84363895	84382215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84381841
tx.13955	chr12	+	1202	6	ISM	ENSMUSG00000012609.20	ENSMUST00000153570.9	655	7	-284	3634	27	1	5prime_fragment	FALSE	canonical	3	11	junction_4	19.5693638118361	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAATATGGTACATTT	NA	False	NA	NA	False	NA	NA	NA	85871510	85892457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020
tx.13956	chr12	+	982	2	ISM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	19	46405	19	-12324	5prime_fragment	FALSE	canonical	3	56	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCGAGAATTTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	86288667	86291739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_86288719_86290808
tx.13957	chr12	+	1597	8	FSM	ENSMUSG00000021033.12	ENSMUST00000220574.2	971	8	-63	-563	-9	0	multi-exon	FALSE	canonical	3	19	junction_2	172.56918163154	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	NA	False	NA	NA	NA	87194482	87211497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_87194619_87204666_87204719_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
tx.13958	chr12	-	3985	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-5	-33	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAGTGGTAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	87490614	87472971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
tx.13959	chr12	-	4006	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	0	2294	0	306	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTACATTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	91815931	91775110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
tx.13960	chr12	+	1302	7	ISM	ENSMUSG00000021177.17	ENSMUST00000151019.8	3945	14	1	30861	1	-6078	5prime_fragment	FALSE	canonical	3	362	junction_1	62.5604152444304	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTTTGTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	99850776	99872760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294
tx.13961	chr12	+	617	3	FSM	ENSMUSG00000097121.3	ENSMUST00000221614.2	706	3	85	4	21	0	multi-exon	FALSE	canonical	2	9	junction_1	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTTGGTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	101050021	101054438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_101050285_101050542_101050759_101054300
tx.13962	chr12	-	1418	4	ISM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	23837	3243	-54	937	3prime_fragment	FALSE	canonical	3	190	junction_2	62.230753383409	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGGTTGACCCTTGC	NA	False	NA	NA	False	NA	NA	NA	101900668	101888402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506
tx.13963	chr12	+	1125	2	ISM	ENSMUSG00000097929.10	ENSMUST00000180503.3	2876	4	206	1822	206	-1822	intron_retention	FALSE	canonical	3	32	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATTTGGAGAAGCAC	NA	False	NA	NA	False	NA	NA	NA	105303457	105348367	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_105303819_105347603
tx.13964	chr12	+	2906	4	ISM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	82048	0	81928	0	3prime_fragment	FALSE	canonical	3	190	junction_3	385.512069273526	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	NA	False	NA	NA	False	NA	NA	NA	110534220	110549496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_110534290_110535387_110535490_110537129_110537203_110546834
tx.13965	chr12	+	1341	8	FSM	ENSMUSG00000021286.9	ENSMUST00000221375.2	1265	8	-39	-37	-12	2	multi-exon	FALSE	canonical	3	56	junction_5	290.764860465691	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	NA	False	NA	NA	NA	111780629	111794822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792009_111792067_111793976_111794120_111794251
tx.13966	chr12	+	2404	16	ISM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	22554	-1	-10500	0	3prime_fragment	FALSE	canonical	3	436	junction_6	47.5291723283945	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9631	False	NA	NA	False	NA	NA	NA	113084451	113100826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
tx.13967	chr12	+	1018	4	ISM	ENSMUSG00000021144.15	ENSMUST00000109723.8	2790	20	34915	0	1645	0	3prime_fragment	FALSE	canonical	3	473	junction_1	39.8580815728337	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	NA	False	NA	NA	False	NA	NA	NA	113096812	113100826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_113096958_113099416_113099449_113099900_113100053_113100137
tx.13968	chr13	+	1840	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	104	2281	45	838	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTCTCCAATCTTGATT	NA	False	NA	NA	False	NA	NA	NA	5911584	5918112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
tx.13969	chr13	-	2644	5	NIC	ENSMUSG00000021302.11	novel	2209	6	NA	NA	1	-4	intron_retention	FALSE	canonical	2	12	junction_1	100.568384694197	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTCAATGTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	14237993	14225247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_14226979_14228494_14229041_14229734_14229806_14232380_14232474_14237790
tx.13970	chr13	-	3139	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	-20	1725	-20	-1725	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTATTATTATACA	8986	False	NA	NA	False	NA	NA	NA	23553398	23538997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
tx.13971	chr13	-	1123	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	198.227657206639	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	36090338	36080686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086071_36087670_36087740_36088401_36088547_36090186
tx.13972	chr13	-	1516	2	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCGCTTCTCAAGCAAC	NA	False	NA	NA	False	NA	NA	NA	38263427	38261034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_38262457_38263333
tx.13973	chr13	-	1464	8	NIC	ENSMUSG00000021432.16	novel	890	9	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	18.1580363947836	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCAAGGTGGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	39144498	39116116	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39139796_39139913_39144407
tx.13974	chr13	+	3065	7	FSM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	5.98377435700541	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCTTTGTGATCTTAT	4395	False	NA	NA	False	NA	NA	NA	45543217	45565498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_45543520_45544664_45544856_45557875_45558062_45559368_45559567_45560032_45560198_45561831_45562253_45563896
tx.13975	chr13	+	589	3	NNC	ENSMUSG00000021373.17	novel	3713	13	NA	NA	5683	26	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	13.5	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGATTTTACTTC	NA	False	NA	NA	False	NA	NA	NA	46799216	46802028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_46799393_46800001_46800143_46801756
tx.13976	chr13	+	569	2	ISM	ENSMUSG00000021373.17	ENSMUST00000225824.2	1634	12	144204	-26	6312	26	3prime_fragment	FALSE	canonical	3	30	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGATTTTACTTC	NA	False	NA	NA	False	NA	NA	NA	46799845	46802028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_46800143_46801756
tx.13977	chr13	+	3757	2	ISM	ENSMUSG00000021395.12	ENSMUST00000223152.2	4085	4	10051	-58	10051	6	3prime_fragment	FALSE	canonical	3	720	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGAACTTTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	51298405	51306588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_51298572_51302997
tx.13978	chr13	+	1208	8	ISM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	19	13188	19	4600	5prime_fragment	FALSE	canonical	3	121	junction_2	14.9256661561245	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAGAAAAAGAAAGAGA	5513	False	NA	NA	False	NA	NA	NA	51805751	51824892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842
tx.13979	chr13	-	3697	10	NNC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	-3632	-2	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_9	157.741779931008	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGGGTTGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	59827257	59782811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59827057
tx.1398	chr11	-	1949	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109989.10	1949	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	32.7813557369218	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	3882044	3867191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881975
tx.13980	chr13	+	497	3	NNC	ENSMUSG00000097502.3	novel	1239	3	NA	NA	867	4	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	0.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGTAGATGATGTTTAA	6280	False	NA	NA	False	NA	NA	NA	59882330	59885288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_59882455_59882560_59882653_59885007
tx.13981	chr13	-	611	2	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCACTAAAAACAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	60019438	60015645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_60016086_60019267
tx.13982	chr13	+	3091	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	-1	-519	-1	519	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62277728	62321752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
tx.13983	chr13	-	5015	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	719	-441	27	441	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTTTATTTATTTATG	NA	False	NA	NA	False	NA	NA	NA	67701230	67686318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
tx.13984	chr13	+	5135	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	7	0	-3	0	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	NA	False	NA	NA	NA	73911822	73964873	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
tx.13985	chr13	-	3479	5	FSM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	-1	-2774	-1	2584	multi-exon	FALSE	canonical	3	16	junction_4	21.3658606192215	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	NA	False	NA	NA	False	NA	NA	NA	74712376	74699444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857_74711944_74712256
tx.13987	chr13	-	1952	8	FSM	ENSMUSG00000074768.7	ENSMUST00000099309.6	2490	8	317	221	-78	-221	multi-exon	FALSE	canonical	1	3	junction_5	5.15474815790535	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTTTGTGGTCCAT	NA	False	NA	NA	False	NA	NA	NA	93774152	93753403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_93754171_93756589_93756819_93757901_93758085_93761321_93761470_93761804_93761997_93763754_93763874_93769743_93769877_93773971
tx.13988	chr13	-	734	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1186	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.5	4	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATCCTCCTCCATCTTT	NA	False	NA	NA	False	NA	NA	NA	98854204	98849586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_98850076_98852942_98853105_98854121
tx.13989	chr13	+	1051	2	NNC	ENSMUSG00000114203.2	novel	960	2	NA	NA	-16513	67	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGCTGTCAGTCCCTG	NA	False	NA	NA	False	NA	NA	NA	99114145	99133993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_99114293_99133089
tx.1399	chr11	-	1919	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109993.9	2027	10	108	0	-7	0	multi-exon	FALSE	canonical	3	40	junction_9	35.4989132158461	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	3882051	3867191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3882012
tx.13990	chr13	-	1657	14	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	24387	-1	-15936	1	3prime_fragment	FALSE	canonical	2	186	junction_5	42.9263853150136	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTGTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	100127760	100085039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719
tx.13991	chr13	+	3079	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4469	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.9177977950463	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGAATTGTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	104320074	104339365	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_104320173_104320495_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
tx.13992	chr13	-	763	3	FSM	ENSMUSG00000042655.6	ENSMUST00000043061.5	1310	3	4	543	4	0	multi-exon	FALSE	canonical	3	12	junction_1	1	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTGTTATGTT	NA	False	NA	NA	False	NA	NA	NA	105000397	104982333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_104982572_104994796_104994955_105000030
tx.13993	chr13	-	976	2	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTCGTTGTTG	8053	False	NA	NA	False	NA	NA	NA	113873032	113827758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_113828644_113872941
tx.13994	chr13	-	1425	2	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTCGTTGTTG	8045	False	NA	NA	False	NA	NA	NA	113873040	113827758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_113828644_113872500
tx.13995	chr13	-	1598	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1721	0	-1721	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATTTGTGTATCGCTAA	NA	False	NA	NA	False	NA	NA	NA	118523788	118516637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
tx.13997	chr14	+	1839	8	ISM	ENSMUSG00000039599.17	ENSMUST00000051915.7	1981	12	38	7090	0	112	5prime_fragment	FALSE	canonical	3	59	junction_5	87.5522001728229	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTGGTACTTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	20398327	20426467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20424397_20424523_20425577
tx.13998	chr14	+	2760	3	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	99854	-437	7249	437	3prime_fragment	FALSE	canonical	3	294	junction_1	8	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAAACATGCTTTTTTG	2296	False	NA	NA	False	NA	NA	NA	21079319	21084181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_21079448_21079849_21079955_21081654
tx.13999	chr14	-	271	3	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	13658	24725	-6866	-4370	internal_fragment	FALSE	canonical	3	99	junction_2	6	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGCCCACGGCCCAGAGG	NA	False	NA	NA	False	NA	NA	NA	24214199	24208745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_24208823_24210312_24210406_24214098
tx.14	chr1	+	3583	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	33	64	-16	9	multi-exon	TRUE	canonical	3	97	junction_4	18.6899036915657	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTTTCAAGTTTAATT	9847	False	NA	NA	False	NA	NA	NA	9918529	9971004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
tx.140	chr1	-	1498	3	ISM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	4767	18	3290	10	3prime_fragment	FALSE	canonical	3	502	junction_1	45	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTAGTTTCACATTTCA	NA	False	NA	NA	False	NA	NA	NA	53387144	53383793	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_53384139_53385738_53385921_53386173
tx.1400	chr11	+	2125	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	3	783	3	-783	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	586	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTCTGTGTTCAGAAG	NA	False	NA	NA	False	NA	NA	NA	3913977	3929221	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
tx.14000	chr14	+	1909	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_5	70.5948486297777	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGTTTAATGTTTCAG	NA	False	NA	NA	False	NA	NA	NA	31807776	31825159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821405_31821589_31822942_31823052_31824213
tx.14001	chr14	+	3056	4	FSM	ENSMUSG00000037536.15	ENSMUST00000163324.8	3132	4	18	58	3	4	multi-exon	FALSE	canonical	3	23	junction_2	28.4526897771644	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGGTTAAAAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	47710035	47769361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_47710175_47738250_47738328_47763661_47763772_47766631
tx.14002	chr14	+	478	2	ISM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	18	72435	13	-193	5prime_fragment	FALSE	canonical	3	625	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAGAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	47886785	47901579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_47886897_47901212
tx.14003	chr14	+	3652	3	FSM	ENSMUSG00000036282.16	ENSMUST00000138478.2	2157	3	183	-1678	183	20	multi-exon	FALSE	canonical	3	313	junction_2	8.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAAGTGTACTTGTTAG	NA	False	NA	NA	False	NA	NA	NA	49415538	49428508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_49415633_49418162_49418219_49425006
tx.14004	chr14	+	1376	7	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	441	4506	22	-462	internal_fragment	FALSE	canonical	3	458	junction_4	43.6746175967486	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCGACTACAGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	52517043	52529352	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931
tx.14005	chr14	-	2262	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_9	49.5403667112416	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	54655382	54606898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54655357
tx.14006	chr14	+	749	7	FSM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	1	-50	1	15	multi-exon	FALSE	canonical	3	24	junction_1	922.719651657834	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTGTGGAAGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	55132075	55135641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55132127_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
tx.14007	chr14	-	2519	14	ISM	ENSMUSG00000022218.17	ENSMUST00000002389.9	2791	15	438	14	438	1	3prime_fragment	FALSE	canonical	3	136	junction_12	33.637116720994	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTTAGTAGTCCTG	1240	False	NA	NA	False	NA	NA	NA	55950107	55937489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890
tx.14008	chr14	+	2245	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	13	1436	13	-1436	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	55983162	55991521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
tx.14009	chr14	+	1800	10	ISM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	-19	9036	-10	-9036	5prime_fragment	FALSE	canonical	3	224	junction_1	39.8630371195555	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATCTTAAAAAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	59678410	59777316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510
tx.1401	chr11	-	2078	3	ISM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	32	0	32	0	intron_retention	FALSE	canonical	3	165	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	4045413	4041479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_4042300_4043800_4044034_4044388
tx.14010	chr14	-	1326	2	ISM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	7999	870	7889	-870	3prime_fragment	FALSE	canonical	3	115	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGTTTATGTTTCT	NA	False	NA	NA	False	NA	NA	NA	59827396	59822891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_59824058_59827236
tx.14011	chr14	-	3824	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	91	-2	-10	2	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGGTCTCAGCAGT	NA	False	NA	NA	False	NA	NA	NA	60488865	60455524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
tx.14012	chr14	-	3850	7	ISM	ENSMUSG00000060548.14	ENSMUST00000111236.4	3958	10	32526	-26	-29539	26	3prime_fragment	FALSE	canonical	3	58	junction_5	10.1775897605147	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	61242873	61201297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523
tx.14014	chr14	-	2079	2	ISM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	52634	614	4849	4	3prime_fragment	FALSE	canonical	3	746	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAATTTGTATTTAAACA	NA	False	NA	NA	False	NA	NA	NA	67257259	67252118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_67254103_67257164
tx.14015	chr14	-	3627	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	98	0	98	0	multi-exon	TRUE	canonical	0	0	junction_8	38.4373191052654	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	NA	False	NA	NA	NA	70391162	70375616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
tx.14016	chr14	-	3425	9	NIC	ENSMUSG00000022003.8	novel	3588	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	14.3172754042101	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGCTTACAGTCATT	NA	False	NA	NA	False	NA	NA	NA	76024445	75997556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76024364
tx.1402	chr11	-	1382	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	29	0	29	0	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	4045416	4041479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
tx.14020	chr14	+	2801	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	10281	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	35.1415085025488	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	121502600	121521156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_121502734_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
tx.14021	chr14	-	1151	2	ISM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	87227	-1	11368	1	3prime_fragment	FALSE	canonical	3	297	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCATACTATTCT	NA	False	NA	NA	False	NA	NA	NA	121529519	121523753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_121524777_121529391
tx.14022	chr15	+	1966	6	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	633640	105092	123532	-97827	internal_fragment	FALSE	canonical	3	25	junction_5	13.0843417870369	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCAGCTTTCCCCGATG	NA	False	NA	NA	False	NA	NA	NA	30806836	30923095	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000
tx.14023	chr15	-	700	2	FSM	ENSMUSG00000037487.8	ENSMUST00000228804.2	522	2	299	-477	299	-2	multi-exon	FALSE	canonical	3	999	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTTTTATGGTGTTAT	2129	False	NA	NA	False	NA	NA	NA	37970560	37968104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_37968750_37970505
tx.14024	chr15	+	2290	4	FSM	ENSMUSG00000051225.10	ENSMUST00000160942.8	2876	4	275	311	-216	-311	multi-exon	FALSE	canonical	2	2	junction_1	4.49691252107735	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAACTGTTCCCTGGA	9488	False	NA	NA	False	NA	NA	NA	57849089	57874094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_57849938_57856302_57856471_57858609_57858735_57872945
tx.14025	chr15	+	696	2	Antisense	novelGene_ENSMUSG00000022358.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCTATATGTTCCT	NA	False	NA	NA	False	NA	NA	NA	58024851	58048278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr15_+_58025076_58047806
tx.14026	chr15	+	1685	6	FSM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	35	1540	35	0	multi-exon	FALSE	canonical	3	41	junction_1	28.8124972885031	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	73620257	73629075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_73620315_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
tx.14027	chr15	+	3518	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	17	5	12	-5	multi-exon	FALSE	canonical	3	54	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTCCTGTGCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	75488544	75497144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_75488670_75489892_75491541_75495399
tx.14028	chr15	+	469	2	ISM	ENSMUSG00000022561.14	ENSMUST00000164972.8	2237	12	2967	-2	580	2	3prime_fragment	FALSE	canonical	3	294	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	7793	False	NA	NA	False	NA	NA	NA	76218510	76219100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_76218661_76218781
tx.14029	chr15	-	2193	5	FSM	ENSMUSG00000054967.8	ENSMUST00000229055.2	2212	5	20	-1	-16	1	multi-exon	FALSE	canonical	3	11	junction_4	6.04152298679729	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGCTCTGAGTTTGTT	8505	False	NA	NA	False	NA	NA	NA	76809628	76794569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76809575
tx.1403	chr11	+	1912	9	FSM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	-33	-5	-33	5	multi-exon	FALSE	canonical	3	21	junction_6	6.41165930161608	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTAAGACATAAATCTG	7817	False	NA	NA	False	NA	NA	NA	4085168	4091177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4089859_4089934_4090079_4090297_4090401_4090486
tx.14030	chr15	-	2414	8	ISM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	75310	1	325	-1	3prime_fragment	FALSE	canonical	3	518	junction_1	37.2251834879868	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	8781	False	NA	NA	False	NA	NA	NA	77651065	77644787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913
tx.14031	chr15	-	652	5	NNC	ENSMUSG00000089715.13	novel	546	5	NA	NA	-2	159	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	64.227622562259	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGGTTTCTGGAATCC	NA	False	NA	NA	False	NA	NA	NA	79718477	79716613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_79716955_79717712_79717780_79717902_79717969_79718115_79718160_79718343
tx.14032	chr15	-	1453	2	Antisense	novelGene_ENSMUSG00000009585.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTAGGCTTGGTTGCCAG	1908	False	NA	NA	False	NA	NA	NA	79789039	79787510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr15_-_79787975_79788050
tx.14033	chr15	-	2850	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_7	159.941698561618	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79855324	79800001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069_79855098_79855202
tx.14034	chr15	-	3142	5	NIC	ENSMUSG00000053411.17	novel	528	6	NA	NA	-9	6	intron_retention	FALSE	canonical	3	17	junction_4	180.403021039006	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79855329	79800001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79855069
tx.14035	chr15	+	865	4	ISM	ENSMUSG00000022390.12	ENSMUST00000229044.2	4618	15	16	14963	16	-2971	5prime_fragment	FALSE	canonical	3	266	junction_2	6.68331255192114	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTTGAGTTTTTTAA	1964	False	NA	NA	False	NA	NA	NA	81629273	81653682	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184
tx.14036	chr15	-	2135	3	FSM	ENSMUSG00000047878.14	ENSMUST00000164614.3	1974	3	2	-163	0	5	multi-exon	FALSE	canonical	3	30	junction_2	34	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCATGGTCACATCGTG	2268	False	NA	NA	False	NA	NA	NA	83135930	83110917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83112796_83114714_83114859_83135817
tx.14037	chr15	-	2633	16	FSM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	14	-28	14	28	multi-exon	FALSE	canonical	3	20	junction_9	11.3927852413515	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTTGTATCACTGTAC	3539	False	NA	NA	False	NA	NA	NA	83234434	83183911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
tx.14039	chr15	+	567	2	ISM	ENSMUSG00000022435.7	ENSMUST00000023070.7	1093	6	4024	-26	4024	26	3prime_fragment	FALSE	canonical	3	5	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGATGTGTGGGTAAC	NA	False	NA	NA	False	NA	NA	NA	84905365	84906774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_84905597_84906438
tx.1404	chr11	+	1704	8	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	6	5	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	11.2231539093728	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTAAGACATAAATCTG	7868	False	NA	NA	False	NA	NA	NA	4085219	4091177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4089738_4089859_4089934_4090079_4090297_4090401_4090486
tx.14040	chr15	+	851	3	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	15063	0	15063	0	3prime_fragment	FALSE	canonical	3	640	junction_1	43.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	85759209	85760774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_85759420_85759736_85759953_85760349
tx.14043	chr15	-	4638	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	21	1	21	-1	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCAGTAGGATTTTTTG	NA	False	NA	-83	True	NA	NA	NA	96597590	96585273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
tx.14044	chr15	+	2856	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	29	-6	29	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1625	False	NA	NA	False	NA	NA	NA	98006375	98030328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
tx.14047	chr15	+	481	2	Antisense	novelGene_ENSMUSG00000022999.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTACTTTCCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	98815721	98827438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr15_+_98815938_98827173
tx.14048	chr15	+	4814	3	ISM	ENSMUSG00000023025.17	ENSMUST00000231128.2	643	5	4350	-4415	4350	0	3prime_fragment	FALSE	canonical	3	552	junction_2	63	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	2541	False	NA	NA	False	NA	NA	NA	99905487	99914239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_99905610_99908172_99908342_99909716
tx.1405	chr11	+	2978	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	19	1923	14	1199	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGACCTTCATGGAAGCA	NA	False	NA	NA	False	NA	NA	NA	4110368	4130618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
tx.14050	chr15	-	406	4	NNC	ENSMUSG00000023050.10	novel	563	3	NA	NA	6	264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.0878023535196	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTATGACTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	102419129	102417282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_102417402_102417724_102417814_102418353_102418441_102419018
tx.14051	chr15	+	2768	2	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4778	2248	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTTTGAGAACCATTT	NA	False	NA	NA	False	NA	NA	NA	102840413	102849292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_102840603_102846713
tx.14052	chr15	-	3344	4	ISM	ENSMUSG00000036061.11	ENSMUST00000229371.2	3882	7	3762	0	-3	0	3prime_fragment	TRUE	canonical	3	65	junction_3	17.3781471969828	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTGCAAATTACT	NA	False	NA	NA	False	NA	NA	NA	103071757	103061716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_103064629_103066043_103066346_103066583_103066655_103071698
tx.14053	chr16	+	415	2	ISM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	28752	3	28471	-3	3prime_fragment	FALSE	canonical	3	158	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTTGGCTGCTATTAT	7690	False	NA	NA	False	NA	NA	NA	3755440	3759008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_3755479_3758631
tx.14054	chr16	+	3179	18	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	136.27729719254	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2952	False	NA	NA	False	NA	NA	NA	4704140	4756160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
tx.14055	chr16	-	2055	15	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	30.0828787159197	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGGGCTCATTTGTGAT	8193	False	NA	NA	False	NA	NA	NA	4782067	4759296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_4759662_4759762_4759847_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4781983
tx.14056	chr16	+	336	3	ISM	ENSMUSG00000096215.9	ENSMUST00000185147.8	399	4	389	-1	-27	1	3prime_fragment	FALSE	canonical	3	48	junction_1	2.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAGTCTGGACTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	4825604	4826174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_4825753_4825835_4825919_4826069
tx.14057	chr16	-	2176	5	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	25	-218	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	169.812396485062	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGCCTTGTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	10810960	10777356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_10778916_10781120_10781278_10784288_10784514_10793290_10793475_10810909
tx.14058	chr16	-	1834	12	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	15182	347	-1207	2	3prime_fragment	FALSE	canonical	3	1176	junction_9	170.184974718201	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCGGTATTTGAATTG	9262	False	NA	NA	False	NA	NA	NA	11056891	11038262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735
tx.14059	chr16	+	4813	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	105	4	0	-4	multi-exon	FALSE	canonical	3	74	junction_7	6.62093155786084	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGTGCCACTTGG	NA	False	NA	NA	False	NA	NA	NA	16714437	16745224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
tx.1406	chr11	+	1921	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	3	-3	3	0	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	1585	False	NA	NA	False	NA	NA	NA	4136824	4165505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
tx.14060	chr16	+	4915	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	-20	147	-20	-147	multi-exon	FALSE	canonical	3	254	junction_1	8	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGAGTGTCTTTTCTT	3439	False	NA	NA	False	NA	NA	NA	17269830	17305151	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17270653_17286756_17287223_17301524
tx.14061	chr16	-	2303	5	FSM	ENSMUSG00000022756.18	ENSMUST00000172164.10	3281	5	50	928	0	4	multi-exon	FALSE	canonical	3	3	junction_4	5.33853912601566	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGGTATTCTTCATAG	NA	False	NA	NA	False	NA	NA	NA	17394535	17390809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17394503
tx.14062	chr16	+	1164	2	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	26373	0	25071	0	3prime_fragment	FALSE	canonical	3	453	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	17607027	17611246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_17607235_17610289
tx.14063	chr16	+	1100	5	NNC	ENSMUSG00000003531.16	novel	1086	5	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	187.78894403026	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTCCTAGTGACTCTGG	NA	False	NA	NA	False	NA	NA	NA	17884281	17889229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_17884464_17884559_17884721_17887287_17887389_17887927_17888096_17888741
tx.14064	chr16	+	1062	5	FSM	ENSMUSG00000003531.16	ENSMUST00000066027.14	1050	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	112	junction_3	141.891463802443	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGATCCTTTCCTAGTG	NA	False	NA	NA	False	NA	NA	NA	17884294	17889222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887945_17888096_17888741
tx.14065	chr16	+	1724	4	FSM	ENSMUSG00000118669.2	ENSMUST00000239537.1	1604	4	25	-145	-8	145	multi-exon	FALSE	canonical	3	234	junction_1	37.8505834389203	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAAGGCCCTGGGTGC	NA	False	NA	NA	False	NA	NA	NA	18210472	18217506	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576
tx.14066	chr16	+	1976	8	ISM	ENSMUSG00000041215.17	ENSMUST00000232172.2	5671	12	-17	18984	9	978	5prime_fragment	FALSE	canonical	3	113	junction_5	27.0132242746823	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATCATTCTCAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	19959825	19990922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940
tx.14067	chr16	+	901	4	ISM	ENSMUSG00000045983.17	ENSMUST00000132320.8	5004	26	10549	-2	-153	0	3prime_fragment	FALSE	canonical	3	1798	junction_2	18.0185090023194	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	8676	False	NA	NA	False	NA	NA	NA	20507574	20511633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_20507616_20507720_20507803_20507941_20508083_20510996
tx.14068	chr16	+	3121	17	FSM	ENSMUSG00000022855.10	ENSMUST00000231724.2	2135	17	26	-1012	3	-3	multi-exon	FALSE	canonical	3	37	junction_2	111.888616489793	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTCTGATAATTTTTC	2256	False	NA	NA	False	NA	NA	NA	21828287	21866628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
tx.1407	chr11	+	1567	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	7	0	7	0	multi-exon	FALSE	canonical	3	115	junction_3	11.4229757506527	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	7125	False	NA	NA	False	NA	NA	NA	4168231	4172409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
tx.14070	chr16	-	1056	6	FSM	ENSMUSG00000022838.15	ENSMUST00000114829.9	1030	6	-26	0	-26	0	multi-exon	FALSE	canonical	2	12	junction_4	1.32664991614216	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGTATTCTCATGTG	8174	False	NA	NA	False	NA	NA	NA	36648649	36614105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_36614289_36620948_36621207_36628376_36628523_36630833_36630971_36645019_36645115_36648412
tx.14071	chr16	-	1306	3	FSM	ENSMUSG00000047261.10	ENSMUST00000102817.5	1420	3	114	0	114	0	multi-exon	FALSE	canonical	2	3	junction_1	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTGTCTCTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	42160900	42068804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_42069478_42112161_42112730_42160835
tx.14072	chr16	-	3984	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	155	-243	-23	0	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	43959404	43905764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
tx.14074	chr16	-	458	2	NNC	ENSMUSG00000022748.9	novel	1150	10	NA	NA	3	32871	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGGAGTGGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	57427224	57231984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_57232247_57427028
tx.14075	chr16	+	2809	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	178	2755	-82	1759	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTTATTGTATATCCC	NA	False	NA	NA	False	NA	NA	NA	78098561	78134893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
tx.14076	chr16	+	2906	18	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-3	-17	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	55.1537642982143	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATTCCCAAAACTTGT	NA	False	NA	NA	False	NA	NA	NA	87251869	87280388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
tx.14077	chr16	-	1940	4	ISM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	48	11	48	-11	intron_retention	FALSE	canonical	3	276	junction_1	14.9740516301441	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAACGTTCATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	90524244	90516210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180
tx.14078	chr16	+	1815	7	FSM	ENSMUSG00000022969.14	ENSMUST00000023691.12	1850	7	27	8	27	4	multi-exon	FALSE	canonical	3	23	junction_1	1.63299316185545	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTAGGGGGTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	91203149	91222714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_91203261_91204505_91204630_91208770_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
tx.14079	chr16	+	399	3	FSM	ENSMUSG00000080717.11	ENSMUST00000122450.8	1298	3	-4	903	4	89	multi-exon	FALSE	canonical	3	115	junction_2	8.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTACTTTAAGAGTATTG	NA	False	NA	NA	False	NA	NA	NA	97798518	97810297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_97798637_97809828_97809956_97810143
tx.1408	chr11	+	2293	3	FSM	ENSMUSG00000058755.4	ENSMUST00000075221.3	2272	3	-20	-1	-20	1	multi-exon	TRUE	canonical	3	46	junction_2	1.5	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCAGTCTTTTATT	8273	False	NA	NA	False	NA	NA	NA	4186399	4191027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_4186914_4188405_4188543_4189385
tx.14080	chr17	+	1532	11	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	64	1668	64	-1668	5prime_fragment	FALSE	canonical	0	0	junction_7	68.9100863444532	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTAATGTTTTGGCCCTT	NA	False	NA	NA	False	NA	NA	NA	15230501	15241043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527
tx.14081	chr17	-	1185	5	NNC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	14.4805904575746	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTTTTCTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	15461038	15451842	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_15452674_15453032_15453145_15454190_15454265_15460531_15460624_15460962
tx.14082	chr17	+	877	3	ISM	ENSMUSG00000014767.18	ENSMUST00000153480.2	712	7	9743	-545	-1157	-14	3prime_fragment	FALSE	canonical	3	304	junction_1	7.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAGACCATTGTTTTG	2611	False	NA	NA	False	NA	NA	NA	15734587	15737675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_15734660_15735877_15735973_15736965
tx.14083	chr17	+	2700	5	FSM	ENSMUSG00000051341.7	ENSMUST00000233281.2	3164	5	80	384	80	151	multi-exon	FALSE	canonical	3	13	junction_3	0.707106781186548	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGGGAAAGCTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	21755880	21782479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_21756096_21758834_21758933_21775246_21775338_21777396_21777524_21780310
tx.14084	chr17	-	554	4	ISM	ENSMUSG00000078546.9	ENSMUST00000190066.7	2221	5	260	2270	-27	-2270	5prime_fragment	FALSE	canonical	2	13	junction_3	1.24721912892465	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTCTTCATTGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	22128647	22100820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_22101066_22106291_22106340_22127029_22127178_22128534
tx.14085	chr17	-	2474	7	FSM	ENSMUSG00000040097.17	ENSMUST00000086325.13	2443	7	-28	-3	-28	-3	multi-exon	FALSE	canonical	3	77	junction_6	22.386131619574	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTGTGTTTGACTA	7577	False	NA	NA	False	NA	NA	NA	23990524	23974390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
tx.14086	chr17	-	1789	2	ISM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	17492	-9	4324	9	3prime_fragment	FALSE	canonical	3	997	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAATATCTTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	24274967	24266698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_24268419_24274898
tx.14087	chr17	+	2078	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234308.2	2084	6	8	-2	6	1	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	914	False	NA	NA	False	NA	NA	NA	24851661	24857812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24852833_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
tx.14088	chr17	-	3304	21	FSM	ENSMUSG00000024170.16	ENSMUST00000115181.9	3530	21	224	2	162	-2	multi-exon	TRUE	canonical	3	51	junction_18	13.9207578816672	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCTTCTGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	25334717	25318545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
tx.14089	chr17	+	3072	9	FSM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	21	6	-1	3	multi-exon	FALSE	canonical	3	89	junction_2	16.5529453572468	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	26042621	26047698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
tx.1409	chr11	-	3030	6	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-89	2318	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_5	60.0066662963374	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGAATGGGTGAATTA	NA	False	NA	NA	False	NA	NA	NA	4391194	4371749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876_4390941_4391080
tx.14092	chr17	+	3602	13	FSM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	-7	0	-7	0	multi-exon	TRUE	canonical	3	108	junction_11	15.481844205391	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGGGCTTTGGTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	29768751	29825869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
tx.14093	chr17	+	571	3	ISM	ENSMUSG00000024036.17	ENSMUST00000171233.9	2972	20	3	43376	3	-594	5prime_fragment	FALSE	canonical	2	5	junction_1	79	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATCTTCCAACACAGG	NA	False	NA	NA	False	NA	NA	NA	31514459	31526337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_31514729_31519263_31519482_31526253
tx.14095	chr17	+	676	6	ISM	ENSMUSG00000048440.17	ENSMUST00000165515.8	2078	12	-19	6844	0	529	5prime_fragment	FALSE	canonical	3	16	junction_2	32.0337322208949	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCGTTGACTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	32755531	32763928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_32755630_32755968_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856
tx.14098	chr17	-	1718	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	-25	-149	-25	149	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCACTCAGCTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	33979305	33965574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
tx.14099	chr17	+	2092	9	FSM	ENSMUSG00000034673.15	ENSMUST00000173328.8	1990	9	-44	-58	-44	58	multi-exon	FALSE	canonical	0	0	junction_1	10.5289778706197	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTACCCACTTGAGA	NA	False	NA	NA	False	NA	NA	NA	34810195	34815639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34810467_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
tx.141	chr1	-	2372	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	49	21	49	7	multi-exon	FALSE	canonical	3	502	junction_1	45.94344349306	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTAGTAGTTTCACATT	NA	False	NA	NA	False	NA	NA	NA	53391862	53383796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
tx.1410	chr11	-	619	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	-1	-35	-1	35	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGACATTTTATTTTGT	NA	False	NA	NA	False	NA	NA	NA	4391106	4374212	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
tx.14100	chr17	-	552	4	NIC	ENSMUSG00000036185.10	novel	665	5	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	17.8200885394982	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGTTTGGCTCCTGT	NA	False	NA	NA	False	NA	NA	NA	35246897	35244934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_35245124_35245669_35245763_35246419_35246565_35246772
tx.14101	chr17	+	2624	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	32	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	31.1318215242649	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4540	False	NA	NA	False	NA	NA	NA	35828104	35841903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_35828127_35829047_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
tx.14102	chr17	+	3180	8	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_5	94.4031735889926	2	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	37148021	37170290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
tx.14103	chr17	-	3251	24	FSM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	28	5	28	-5	multi-exon	FALSE	canonical	3	105	junction_20	27.310993375713	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	45997157	45971101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
tx.14104	chr17	-	1350	4	FSM	ENSMUSG00000023951.19	ENSMUST00000133605.8	874	4	-342	-134	-342	7	multi-exon	FALSE	canonical	3	338	junction_2	71.0602248487546	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATATTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	46336149	46329397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369
tx.14105	chr17	-	613	3	NIC	ENSMUSG00000002769.10	novel	1035	6	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	13	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCCTGGTGTTTCTT	5359	False	NA	NA	False	NA	NA	NA	47037714	47036589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_47036898_47036986_47037109_47037531
tx.14106	chr17	-	436	2	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATGTGTGTGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	47403172	47400287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_-_47400653_47403101
tx.14107	chr17	-	2788	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233121.2	2793	8	2	3	2	-3	multi-exon	FALSE	canonical	3	89	junction_1	41.4984632122636	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGACATAGGGCCTCTCA	NA	False	NA	NA	False	NA	NA	NA	47813210	47799209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
tx.14108	chr17	+	2636	11	FSM	ENSMUSG00000064120.15	ENSMUST00000024797.16	2646	11	8	2	8	-2	multi-exon	FALSE	canonical	3	15	junction_10	7.06328535456412	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGATTGGGGACTCTT	NA	False	NA	NA	False	NA	NA	NA	49735399	49762458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057
tx.14109	chr17	-	1070	6	ISM	ENSMUSG00000038781.8	ENSMUST00000233494.2	1597	12	5312	0	-1781	0	3prime_fragment	FALSE	canonical	3	21	junction_5	4.54312667664022	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCCATGTGGCTGTA	NA	False	NA	NA	False	NA	NA	NA	56307261	56304081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56307016_56307086
tx.1411	chr11	+	753	6	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	-4	-31962	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	127.679912280672	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAGATATTTATGAATT	NA	False	NA	NA	False	NA	NA	NA	4587742	4601423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4601308
tx.14110	chr17	+	932	4	ISM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	23	37322	23	688	5prime_fragment	FALSE	canonical	3	222	junction_1	69.8426803609369	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGCGTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	66090383	66111595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854
tx.14111	chr17	+	3535	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	0	208	0	-208	multi-exon	FALSE	canonical	3	85	junction_1	58	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTTCTTGATCATT	NA	False	NA	NA	False	NA	NA	NA	69690044	69697537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_69690265_69692415_69692500_69694306
tx.14112	chr17	+	1308	2	ISM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	8885	44	4450	-44	3prime_fragment	FALSE	canonical	3	426	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTATGACATCGTCTCT	NA	False	NA	NA	False	NA	NA	NA	74805372	74807228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_74805418_74805965
tx.14113	chr17	+	2069	17	NIC	ENSMUSG00000055817.19	novel	2087	17	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_15	404.890412449776	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTTTATTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	84013640	84122334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
tx.14114	chr17	-	401	4	ISM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	14	151772	14	-78763	5prime_fragment	FALSE	canonical	3	93	junction_3	4.64279609239471	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTTCCGAGGGCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	86452589	86443864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_86443964_86446496_86446678_86449787_86449868_86452548
tx.14115	chr17	-	861	5	NIC	ENSMUSG00000024145.7	novel	988	6	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	138.539705499904	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	87332816	87304683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_87304996_87327828_87327946_87329286_87329379_87331092_87331342_87332725
tx.14116	chr17	-	444	3	Antisense	novelGene_ENSMUSG00000033855.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	9.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTGACTTAGGGCCT	NA	False	NA	NA	False	NA	NA	NA	88932932	88923827	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_-_88924018_88928723_88928829_88932783
tx.14117	chr17	-	3076	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-10	443	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGACTAGCTTAGTTG	NA	False	NA	NA	False	NA	NA	NA	95057457	95034069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
tx.14118	chr18	-	509	2	FSM	ENSMUSG00000024235.12	ENSMUST00000172805.2	2048	2	31	1508	-27	-1508	multi-exon	FALSE	canonical	3	28	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTGCTGTGTGCTCTG	437	False	NA	NA	False	NA	NA	NA	4352984	4348962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_4349339_4352851
tx.14119	chr18	-	1539	3	NNC	ENSMUSG00000101406.2	novel	1085	2	NA	NA	-305	599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTAGCCTCCTCTTTTAC	6579	False	NA	NA	False	NA	NA	NA	12637788	12633647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_12634942_12637093_12637209_12637658
tx.1412	chr11	+	2651	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	-1	0	-1	0	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTGACATGCTCCAG	NA	False	NA	NA	False	NA	NA	NA	4587745	4633385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
tx.14120	chr18	-	1407	3	ISM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	57147	2602	57147	-2602	3prime_fragment	FALSE	canonical	3	329	junction_2	4	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTCAGACATACATGG	9330	False	NA	NA	False	NA	NA	NA	20822314	20820257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_20821526_20821991_20822094_20822277
tx.14123	chr18	-	2209	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	85	5	-7	-5	multi-exon	TRUE	canonical	2	5	junction_4	3.35638289270592	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAACTGCCTTGGCCTAGT	NA	False	NA	NA	False	NA	NA	NA	35873522	35866738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
tx.14126	chr18	+	3070	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	92.3196272752816	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAATTGAAGTAGACACG	972	False	NA	NA	False	NA	NA	NA	38429733	38450891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_38429852_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
tx.14127	chr18	+	2999	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	92.9832057051696	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	978	False	NA	NA	False	NA	NA	NA	38429739	38450902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
tx.14129	chr18	-	471	2	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTGTCCTTATTGA	NA	False	NA	NA	False	NA	NA	NA	45692422	45691124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr18_-_45691359_45692185
tx.1413	chr11	-	426	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	8	0	0	0	multi-exon	FALSE	canonical	3	8152	junction_1	0	1699	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTTTGCACGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	4654334	4651972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_4652221_4654156
tx.14130	chr18	+	880	2	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	41935	0	21307	0	3prime_fragment	FALSE	canonical	3	1501	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	False	NA	NA	False	NA	NA	NA	56882819	56886496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_56882882_56885678
tx.14131	chr18	-	3515	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	11	4288	11	15	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAACGACAGTTCCCCT	8726	False	NA	NA	False	NA	NA	NA	61344673	61330278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
tx.14132	chr18	-	2085	10	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	20005	2	6781	-2	3prime_fragment	FALSE	canonical	3	706	junction_6	36.8644497357683	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGGGTTGCCATGTTG	NA	False	NA	NA	False	NA	NA	NA	67562237	67537835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050
tx.14133	chr18	-	2344	9	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	112.236357745608	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663353	70641755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658414_70658600_70659627_70659793_70663258
tx.14134	chr19	+	954	7	FSM	ENSMUSG00000024845.20	ENSMUST00000148807.11	937	7	-20	3	0	0	multi-exon	FALSE	canonical	3	163	junction_2	194.337907321815	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTTGCACTTTCCTGG	4370	False	NA	NA	False	NA	NA	NA	4175958	4181731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
tx.14135	chr19	-	541	3	NNC	ENSMUSG00000061451.14	novel	633	3	NA	NA	-628	28	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	1	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGGCCACTCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	5122788	5120858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_5121140_5121754_5121923_5122696
tx.14136	chr19	-	2960	16	FSM	ENSMUSG00000024862.17	ENSMUST00000116563.8	3169	16	209	0	-51	0	multi-exon	FALSE	canonical	3	42	junction_15	16.0036107036992	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	5168379	5157773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
tx.14137	chr19	+	516	4	NNC	ENSMUSG00000024925.12	novel	1126	4	NA	NA	-26	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	123.874488450564	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGTGGGCACCTTAGC	5019	False	NA	NA	False	NA	NA	NA	5651874	5652969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_5652109_5652220_5652265_5652477_5652598_5652851
tx.14138	chr19	+	743	2	FSM	ENSMUSG00000110156.3	ENSMUST00000209642.2	647	2	139	-235	8	-1	multi-exon	FALSE	canonical	3	13	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTCACACTACACAGCG	9363	False	NA	NA	False	NA	NA	NA	5962988	5964856	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5963101_5964225
tx.14139	chr19	-	2346	15	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	5887	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	58.8802399202077	3	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	8484	False	NA	NA	False	NA	NA	NA	6059346	6038572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116
tx.1414	chr11	+	791	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	397	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	4654669	4687669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
tx.14140	chr19	+	2529	2	NNC	ENSMUSG00000100141.2	novel	1112	2	NA	NA	-298	1078	intron_retention	FALSE	canonical	3	11	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTATGATCCATCCAT	NA	False	NA	NA	False	NA	NA	NA	9584169	9586818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_9584206_9584325
tx.14141	chr19	-	1551	5	FSM	ENSMUSG00000024666.7	ENSMUST00000235990.2	1260	5	-289	-2	-34	0	multi-exon	FALSE	canonical	3	27	junction_3	58.8175143983491	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1476	False	NA	NA	False	NA	NA	NA	10554760	10547841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554447
tx.14142	chr19	-	2295	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236607.2	2516	18	222	-1	0	0	multi-exon	FALSE	canonical	3	13	junction_17	13.858404068355	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTCCCTGTTTACA	9741	False	NA	NA	False	NA	NA	NA	10582796	10569560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582772
tx.14143	chr19	-	3240	18	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	6350	826	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	77.589595492693	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCGAGTTTTTACAATTT	NA	False	NA	NA	False	NA	NA	NA	23234880	23185260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851
tx.14144	chr19	-	1471	15	NIC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	-2	-536	combination_of_known_junctions	FALSE	canonical	3	7	junction_14	49.7256247331498	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATATCTGATATTCA	NA	False	NA	NA	False	NA	NA	NA	24938976	24897815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938680
tx.14145	chr19	-	842	5	ISM	ENSMUSG00000013662.7	ENSMUST00000237752.2	2269	9	-42	22810	-8	-164	5prime_fragment	FALSE	canonical	3	382	junction_4	29.508473359359	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTATTGGAAGAGGGCA	NA	False	NA	NA	False	NA	NA	NA	32689739	32675667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
tx.14146	chr19	-	921	6	FSM	ENSMUSG00000024990.14	ENSMUST00000112335.4	937	6	17	-1	17	0	multi-exon	FALSE	canonical	3	6	junction_5	4.31740662898458	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCTATGAGTTGAAGAC	5226	False	NA	NA	False	NA	NA	NA	38113259	38105076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_38105358_38106719_38106933_38112476_38112584_38112743_38112881_38112966_38113096_38113205
tx.14147	chr19	-	1529	4	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	45791	0	45791	0	3prime_fragment	TRUE	canonical	3	1172	junction_3	45.3455865793158	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	7919	False	NA	NA	False	NA	NA	NA	41206628	41202230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608
tx.14148	chr19	+	1329	2	FSM	ENSMUSG00000011752.8	ENSMUST00000235468.2	593	2	-92	-644	-54	644	multi-exon	FALSE	canonical	3	6273	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAAATTGTCCCCCAG	4121	False	NA	NA	False	NA	NA	NA	41900422	41905169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_41900626_41904043
tx.14149	chr19	+	1808	5	ISM	ENSMUSG00000025202.9	ENSMUST00000026220.7	3489	6	12191	1344	12191	654	3prime_fragment	FALSE	canonical	3	12	junction_1	133.013157243936	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTCTGTGATCAGAC	624	False	NA	NA	False	NA	NA	NA	44203898	44231111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_44204124_44222661_44222793_44224209_44224416_44226814_44227048_44230098
tx.1415	chr11	+	751	5	ISM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	17677	0	-6230	0	3prime_fragment	FALSE	canonical	3	609	junction_1	36.4374463979023	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	4672354	4687669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
tx.14150	chr19	-	3821	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4892	0	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_25	35.5729335309867	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	NA	False	NA	NA	False	NA	NA	NA	45982035	45805802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817
tx.14151	chr19	+	435	2	ISM	ENSMUSG00000055491.15	ENSMUST00000062322.11	5205	14	15679	-2	509	0	3prime_fragment	FALSE	canonical	3	554	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCGTGTCCTTTCTG	3403	False	NA	NA	False	NA	NA	NA	46060701	46061350	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_46060774_46060987
tx.14152	chr19	-	600	2	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCATACAGTAGTTTGA	4010	False	NA	NA	False	NA	NA	NA	47167191	47163053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr19_-_47163260_47166797
tx.14153	chr19	-	1984	5	FSM	ENSMUSG00000042694.18	ENSMUST00000182431.8	558	5	-124	-1302	6	1302	multi-exon	TRUE	canonical	1	2	junction_1	57.4429064376099	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGATGTTACATTGA	NA	False	NA	NA	False	NA	NA	NA	47525527	47509268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_47510637_47513125_47513195_47517075_47517172_47524634_47524811_47525252
tx.14154	chr19	-	468	3	FSM	ENSMUSG00000074733.15	ENSMUST00000143264.8	4825	3	-24	4381	3	166	multi-exon	FALSE	canonical	3	41	junction_2	7	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGGCTTTGAGAAT	NA	False	NA	NA	False	NA	NA	NA	61129252	61115274	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_61115506_61115875_61116003_61129142
tx.14155	chr19	+	2634	2	Genic_Genomic	ENSMUSG00000118252.2	novel	801	1	NA	NA	-15713	706	multi-exon	FALSE	canonical	2	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAAAGAAAAATGTGTG	NA	False	NA	NA	False	NA	NA	NA	61139973	61157193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr19_+_61140397_61154982
tx.14156	chr2	+	3735	14	FSM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	-1	-1265	-1	1265	multi-exon	FALSE	canonical	3	20	junction_5	4.46419019339905	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTATGATGACATTTT	1020	False	NA	NA	False	NA	NA	NA	3425185	3456394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
tx.14157	chr2	+	1270	4	ISM	ENSMUSG00000026648.19	ENSMUST00000132565.8	655	8	5	3307	5	-3307	5prime_fragment	FALSE	canonical	3	25	junction_3	4.49691252107735	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGTGTACTTGCAGATAC	1026	False	NA	NA	False	NA	NA	NA	3425191	3435744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783
tx.14158	chr2	-	3702	2	ISM	ENSMUSG00000051396.16	ENSMUST00000124331.8	4314	5	3981	5	3981	-5	3prime_fragment	FALSE	canonical	3	6	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGTTGTGGGTTTGTCT	7980	False	NA	NA	False	NA	NA	NA	3509813	3505568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_3508787_3509329
tx.14159	chr2	-	3753	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	0	1039	0	-300	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATCGTGTTTAATTC	NA	False	NA	NA	False	NA	NA	NA	10053407	9920401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
tx.1416	chr11	+	1894	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	33	-1	-15	1	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	574	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGGTGTTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	4823983	4844201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
tx.14160	chr2	+	1773	5	FSM	ENSMUSG00000026730.13	ENSMUST00000134794.8	3571	5	-43	1841	8	0	multi-exon	FALSE	canonical	2	8	junction_1	18.3490462967425	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTGTTTTCCACTTAT	4720	False	NA	NA	False	NA	NA	NA	12928859	13006425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999702_13005667
tx.14161	chr2	-	1265	8	NNC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	26.6182383384945	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9357	False	NA	NA	False	NA	NA	NA	24825224	24815363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_24815689_24815767_24815846_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
tx.14162	chr2	+	1811	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	33.0924368247489	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATTATGTGTATGCA	NA	False	NA	NA	False	NA	NA	NA	24852444	24862168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_24852823_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
tx.14163	chr2	-	1052	4	NIC	ENSMUSG00000026939.13	novel	975	4	NA	NA	0	7	intron_retention	FALSE	canonical	0	0	junction_3	19.4307888557196	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCTGAAGCAATTAAACAC	NA	False	NA	NA	False	NA	NA	NA	25511975	25510108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_25510543_25511077_25511186_25511386_25511541_25511619
tx.14164	chr2	+	1101	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	105.177751330783	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAATGGGGGAATGGGGA	201	False	NA	NA	False	NA	NA	NA	26476670	26482699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482254_26482429
tx.14165	chr2	+	3060	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	1	-953	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	127.209643240335	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCCTGATATGTGGT	NA	False	NA	NA	False	NA	NA	NA	29825438	29849430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832565_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
tx.14166	chr2	+	1493	6	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	13782	953	178	-953	3prime_fragment	FALSE	canonical	3	492	junction_2	26.6983145535444	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCCTGATATGTGGT	NA	False	NA	NA	False	NA	NA	NA	29839219	29849430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
tx.14167	chr2	-	1809	11	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	104.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTCCATGAGCCACCC	NA	False	NA	NA	False	NA	NA	NA	30249275	30234814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_30235440_30235710_30235952_30236318_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.14168	chr2	+	1511	4	NIC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	14	3	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	225.252944240223	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCAGGCAGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	30697982	30713032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_30698378_30709640_30709845_30710460_30710714_30712373
tx.14169	chr2	+	4275	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	28.9025842270203	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	32178261	32197925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
tx.1417	chr11	+	2242	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	-5	-2	-5	0	multi-exon	TRUE	canonical	3	228	junction_1	27.0805712775824	117	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTAGCTCCTTGG	NA	False	NA	NA	False	NA	NA	NA	4845337	4878867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
tx.14170	chr2	-	1797	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	66	0	intron_retention	FALSE	canonical	3	1092	junction_4	84.0514128376198	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	32602703	32597449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_32598302_32599478_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
tx.14171	chr2	-	1181	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	131.97928099609	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2760	False	NA	NA	False	NA	NA	NA	34689801	34669228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675738_34680514_34680668_34685183_34685342_34687386_34687446_34689762
tx.14172	chr2	-	2937	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	0	-316	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTATCTTATTATT	NA	False	NA	NA	False	NA	NA	NA	37593871	37473483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
tx.14173	chr2	+	365	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1282	329	multi-exon	FALSE	canonical	0	0	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATTGAAGAAGATC	NA	False	NA	NA	False	NA	NA	NA	40447045	40447457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr2_+_40447295_40447341
tx.14174	chr2	-	2381	20	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-9	492	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	148.466137236129	3	2	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAATATTTAA	NA	False	NA	NA	False	NA	NA	NA	53081225	53034837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
tx.14175	chr2	-	1421	8	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39399	10016	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	38.7940664514141	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGACCAGTGAATTG	1569	False	NA	NA	False	NA	NA	NA	59881015	59799002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
tx.14176	chr2	+	3498	10	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	26	-9	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	112.133298101901	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTAGTTTGAACTTT	NA	False	NA	NA	False	NA	NA	NA	60040282	60079546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
tx.14177	chr2	-	1549	2	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-92	81107	-20	-81107	5prime_fragment	FALSE	canonical	3	663	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTTTACTCTAAGAATT	NA	False	NA	NA	False	NA	NA	NA	60213667	60205210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_60206574_60213481
tx.14178	chr2	-	1891	7	ISM	ENSMUSG00000027030.16	ENSMUST00000126663.8	2578	11	52132	-3	52132	0	3prime_fragment	FALSE	canonical	3	41	junction_5	6.20931200339905	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGAGTCTCCTCCATTTCG	NA	False	NA	NA	False	NA	NA	NA	68144731	68040788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707
tx.14179	chr2	+	472	3	FSM	ENSMUSG00000063714.16	ENSMUST00000146195.2	364	3	-42	-66	-42	5	multi-exon	FALSE	canonical	1	21	junction_2	38	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGCAAGCTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	72809817	72818956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_72809940_72817871_72817977_72818711
tx.1418	chr11	+	3787	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	86	212	-2	-150	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	NA	False	NA	NA	NA	4936909	4992579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
tx.14180	chr2	-	4217	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-73	-1748	0	2	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	73722972	73646861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
tx.14181	chr2	-	1204	2	ISM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	63	1956	-11	-1954	5prime_fragment	FALSE	canonical	3	299	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGGGGGGTCTGGCATAT	NA	False	NA	NA	False	NA	NA	NA	84557631	84555421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_84556501_84557506
tx.14182	chr2	-	3514	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	10	-116	1	116	multi-exon	TRUE	canonical	3	95	junction_1	34.6292592408193	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGCCTGTACCTCAAAT	NA	False	NA	NA	False	NA	NA	NA	94237023	94158165	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
tx.14183	chr2	+	3828	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-11	2352	0	-2352	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGCTGTGTCTATATT	NA	False	NA	NA	False	NA	NA	NA	101508773	101529662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
tx.14184	chr2	-	2000	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-803	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	654.943234181406	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTCTTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	105226496	105217272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105226229
tx.14185	chr2	+	587	2	NNC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	10	-56501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGGTTCGTGGTTCTG	NA	False	NA	NA	False	NA	NA	NA	112114931	112125477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_112115151_112125109
tx.14186	chr2	+	2540	7	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	26872	33	26857	-33	3prime_fragment	FALSE	canonical	3	424	junction_4	42.9249991910956	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCACTTAATAAATTCAGT	NA	False	NA	NA	False	NA	NA	NA	112236427	112244552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
tx.14187	chr2	+	3041	19	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	-16	31939	-16	-8995	5prime_fragment	FALSE	canonical	3	81	junction_8	8.9504810547317	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTTTCCTGATATTTA	NA	False	NA	NA	False	NA	NA	NA	118219082	118273776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
tx.14188	chr2	+	3736	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	253	0	253	0	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	NA	False	NA	NA	False	NA	NA	NA	119630247	119648585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
tx.14189	chr2	-	2047	8	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	4	11	combination_of_known_junctions	FALSE	canonical	3	389	junction_5	258.657365356298	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCCCTGACTTTCTTGG	9789	False	NA	NA	False	NA	NA	NA	120394320	120356732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
tx.1419	chr11	+	1990	9	ISM	ENSMUSG00000009090.18	ENSMUST00000109897.8	3942	21	44899	150	746	-150	3prime_fragment	FALSE	canonical	3	257	junction_6	28.743477520996	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	NA	False	NA	NA	NA	4981722	4992579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
tx.14190	chr2	+	2012	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	-20	666	0	-666	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAGCTGTATTAGCTCT	NA	False	NA	NA	False	NA	NA	NA	120398151	120431070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
tx.14191	chr2	-	1696	11	NNC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.7994185981002	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCGATCATTAGC	NA	False	NA	NA	False	NA	NA	NA	121273086	121269507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_121270031_121270107_121270153_121270328_121270519_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
tx.14192	chr2	+	2106	15	FSM	ENSMUSG00000003660.11	ENSMUST00000142327.2	2923	15	-30	847	-30	-847	multi-exon	FALSE	canonical	3	532	junction_10	58.9113827745383	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATGAAGATGTGGCCAC	NA	False	NA	NA	False	NA	NA	NA	127050275	127063790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664
tx.14193	chr2	-	731	5	NNC	ENSMUSG00000027378.17	novel	2260	20	NA	NA	-3953	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	34.4564943080401	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTATATCTAAATTTT	NA	False	NA	NA	False	NA	NA	NA	127590420	127582653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127590376
tx.14194	chr2	+	2266	8	FSM	ENSMUSG00000037902.19	ENSMUST00000049262.14	3644	8	37	1341	-21	298	multi-exon	FALSE	canonical	3	16	junction_7	35.4193536395697	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTAGTTGTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	129435511	129472807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
tx.14195	chr2	-	3045	20	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_19	27.8455375458768	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	NA	False	NA	NA	NA	130539396	130526032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
tx.14196	chr2	+	1382	12	ISM	ENSMUSG00000058793.15	ENSMUST00000089461.11	8073	13	7305	6665	7305	57	3prime_fragment	FALSE	canonical	2	258	junction_4	50.3153690599241	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGTCATTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	132135163	132147305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
tx.14197	chr2	+	2945	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	47	-334	combination_of_known_splicesites	FALSE	canonical	2	37	junction_12	207.575877447162	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGTGTATATTTTTA	NA	False	NA	NA	False	NA	NA	NA	146854962	146919586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
tx.14198	chr2	+	427	2	ISM	ENSMUSG00000019188.17	ENSMUST00000148156.2	2769	3	-49	5801	-24	-5801	5prime_fragment	FALSE	canonical	3	159	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTCTCTGCTACCTGT	NA	False	NA	NA	False	NA	NA	NA	152511356	152519560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_152511685_152519461
tx.1420	chr11	+	1207	3	FSM	ENSMUSG00000034209.5	ENSMUST00000037218.2	1110	3	-102	5	-102	-5	multi-exon	FALSE	canonical	3	9	junction_2	0.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAATTTAAGGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	5008025	5010380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_5008525_5009432_5009558_5009797
tx.14201	chr2	+	1297	2	FSM	ENSMUSG00000027605.19	ENSMUST00000149788.2	3563	2	8	2258	8	-2258	multi-exon	FALSE	canonical	3	60	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGAAAATTTCTTAC	2100	False	NA	NA	False	NA	NA	NA	155359960	155364953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_155360205_155363900
tx.14202	chr2	+	1130	2	ISM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	-24	17506	-12	401	5prime_fragment	FALSE	canonical	3	138	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGAAGGGTACTAGTG	NA	False	NA	NA	False	NA	NA	NA	156389491	156393386	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_156389804_156392568
tx.14203	chr2	+	2662	4	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-57	-15	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	80.6735534250365	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTAAAGTCAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	156682884	156697475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_156683011_156686075_156686302_156695048_156695149_156695265
tx.14204	chr2	-	3538	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	58	0	-12	0	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGCCTTGTCCTTT	8864	False	NA	NA	False	NA	NA	NA	157988298	157958321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
tx.14205	chr2	+	2957	6	NIC	ENSMUSG00000018326.10	novel	849	4	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	598.08648204085	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	NA	False	NA	NA	False	NA	NA	NA	163837441	163860508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_163837792_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
tx.14206	chr2	+	445	2	FSM	ENSMUSG00000070529.8	ENSMUST00000094344.6	459	2	12	2	12	-2	multi-exon	FALSE	canonical	2	4	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACACTCTTAATAATCAC	5	True	NA	NA	False	NA	NA	NA	164497977	164499286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164498119_164498982
tx.14207	chr2	+	2614	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	94	0	94	0	multi-exon	FALSE	canonical	3	86	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGTTTTTTGAGACG	3157	False	NA	NA	False	NA	NA	NA	164647111	164664050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164647352_164661676
tx.14208	chr2	+	1287	6	ISM	ENSMUSG00000027540.14	ENSMUST00000126839.8	4292	10	35413	2448	16737	2200	3prime_fragment	FALSE	canonical	3	103	junction_1	14.5464772367745	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGTTTTTAACATTTA	NA	False	NA	NA	False	NA	NA	NA	167809704	167818857	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
tx.14209	chr2	-	564	5	FSM	ENSMUSG00000078880.11	ENSMUST00000108990.9	1628	5	-25	1089	0	263	multi-exon	FALSE	canonical	2	5	junction_1	103.562481140614	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAGTCTTTGCAAGAAG	NA	False	NA	NA	False	NA	NA	NA	176328136	176315723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_176315941_176317097_176317159_176317363_176317491_176324514_176324570_176328032
tx.1421	chr11	-	2400	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	1342	junction_9	1044.5656674397	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	5049076	5019689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
tx.14210	chr2	+	1483	4	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3627	1124	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	111.283421945948	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCACGTGTGCAAATTT	NA	False	NA	NA	False	NA	NA	NA	175529702	175541877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_175529815_175533277_175533333_175540356_175540484_175540688
tx.14211	chr2	-	3803	5	NNC	ENSMUSG00000074527.12	novel	3823	5	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	34.8093019177346	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGGATAGACAGAAACAT	NA	False	NA	NA	False	NA	NA	NA	176619602	176605834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619512
tx.14212	chr2	+	1839	13	FSM	ENSMUSG00000039050.9	ENSMUST00000142376.2	1688	13	-17	-134	-17	134	multi-exon	TRUE	canonical	3	166	junction_6	20.4306074853936	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTCTAGCTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	179761179	179801219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821
tx.14213	chr2	+	3379	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	201	junction_1	24.4135379110307	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTGCTTGCTTCAC	4034	False	NA	NA	False	NA	NA	NA	180609026	180624319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
tx.14214	chr3	-	1574	8	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	260.875136290705	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTATTGCATTTGATC	NA	False	NA	NA	False	NA	NA	NA	10416368	10405017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416323
tx.14215	chr3	+	2853	8	NNC	ENSMUSG00000027601.14	novel	764	2	NA	NA	11429	-11	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	377.342587805072	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATACTATTATCTATTTGT	NA	False	NA	NA	False	NA	NA	NA	19253906	19274970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_19253997_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
tx.14216	chr3	+	1702	3	FSM	ENSMUSG00000037661.15	ENSMUST00000166278.7	1689	3	-10	-3	-10	3	multi-exon	FALSE	canonical	3	44	junction_2	125	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	30910088	30951344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_30910207_30931383_30931482_30949858
tx.14217	chr3	-	1851	11	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	9	16344	9	-381	5prime_fragment	FALSE	canonical	3	213	junction_9	16.2185079461706	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGAAGAAAGCCAGCCTT	NA	False	NA	NA	False	NA	NA	NA	36054818	36030325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
tx.14218	chr3	-	2189	7	ISM	ENSMUSG00000037325.11	ENSMUST00000108155.8	2437	18	-106	28170	-2	6296	5prime_fragment	FALSE	canonical	3	23	junction_4	5.76387215526353	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATATGAATACATGTCTA	NA	False	NA	NA	False	NA	NA	NA	36667540	36657189	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666160_36666227_36667398
tx.14219	chr3	-	1214	5	FSM	ENSMUSG00000050174.16	ENSMUST00000146324.8	1264	5	-30	80	-5	-4	multi-exon	FALSE	canonical	2	6	junction_4	11.0792599030802	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGATTGTAGCTCTAA	NA	False	NA	NA	False	NA	NA	NA	37474365	37459138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473971
tx.1422	chr11	-	554	2	ISM	ENSMUSG00000009079.17	ENSMUST00000130118.2	649	3	521	-281	521	-4	3prime_fragment	FALSE	canonical	3	4970	junction_1	0	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCATCCTCCTCCTCTGT	NA	False	NA	NA	False	NA	NA	NA	5020370	5019692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_5020104_5020227
tx.14220	chr3	+	3478	9	ISM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	1	10015	1	154	5prime_fragment	FALSE	canonical	3	683	junction_7	60.6727904418447	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGTGTATGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	41510166	41561284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
tx.14221	chr3	+	533	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	696	13	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTCAACATGCTTAG	6158	False	NA	NA	False	NA	NA	NA	54389576	54390359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr3_+_54389635_54389884
tx.14222	chr3	+	782	4	NNC	ENSMUSG00000027796.3	novel	5368	6	NA	NA	30743	-3630	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.84754619472471	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCACCGTTTGTTTTGTGC	651	False	NA	NA	False	NA	NA	NA	54693745	54705048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_54693779_54696606_54696829_54701652_54701910_54704778
tx.14226	chr3	-	894	5	ISM	ENSMUSG00000028063.16	ENSMUST00000036252.7	1536	10	8152	-1	-553	0	3prime_fragment	FALSE	canonical	3	147	junction_3	10.256095748383	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	3509	False	NA	NA	False	NA	NA	NA	88392467	88390511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233
tx.14227	chr3	-	986	6	NNC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	53.9051017993659	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	89177857	89175552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_89175890_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
tx.14228	chr3	-	4301	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	36	0	36	0	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	NA	False	NA	NA	NA	90340800	90298702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
tx.14229	chr3	+	916	2	FSM	ENSMUSG00000028145.10	ENSMUST00000196824.2	940	2	40	-16	34	16	multi-exon	FALSE	canonical	3	31	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCTGAGCTCACCCCAA	NA	False	NA	NA	False	NA	NA	NA	94217476	94225493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_94217596_94224696
tx.1423	chr11	-	2394	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	190	4	-9	-4	multi-exon	FALSE	canonical	3	2776	junction_9	796.06296616144	643	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCATCCTCCTCCTCTGT	NA	False	NA	NA	False	NA	NA	NA	5049076	5019692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
tx.14230	chr3	-	713	6	NNC	ENSMUSG00000038543.14	novel	752	6	NA	NA	-321	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.8124939024376	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTGCCTACTTCTTA	NA	False	NA	NA	False	NA	NA	NA	95799638	95791269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_95791550_95792281_95792381_95795452_95795609_95796168_95796228_95797034_95797122_95799606
tx.14232	chr3	-	4075	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	140	2316	140	818	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATAGCCTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	102111869	102063214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
tx.14233	chr3	-	2912	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	132	2	132	-2	multi-exon	FALSE	canonical	3	24	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTTTTGTGAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	115508589	115504083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_115506764_115508357
tx.14234	chr3	+	2170	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2122	32	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	74.6183176795975	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116655337	116697159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
tx.14235	chr3	-	2605	12	NNC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	143.339912719774	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTTTTTCTAGTTGTA	NA	False	NA	NA	False	NA	NA	NA	138195148	138164716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184053_138184101_138184630_138184692_138186448_138186562_138188827_138188880_138195018
tx.14236	chr3	+	2282	14	FSM	ENSMUSG00000040213.14	ENSMUST00000044392.11	4206	14	-40	1964	-11	379	multi-exon	FALSE	canonical	3	21	junction_2	23.3184793520062	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATAACCAACTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	142406800	142450667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
tx.14237	chr3	-	2732	4	ISM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	83058	614	4174	-614	3prime_fragment	FALSE	canonical	3	455	junction_2	5.73488351136175	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTTTAAGTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	142504707	142497276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663
tx.14238	chr3	-	512	2	ISM	ENSMUSG00000004591.17	ENSMUST00000174422.8	2904	22	87503	-255	8965	153	3prime_fragment	FALSE	canonical	3	461	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTTTAAAAAGAAGAAGA	3187	False	NA	NA	False	NA	NA	NA	142499916	142499316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_142499776_142499863
tx.14239	chr3	-	2519	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	224	1218	-1	-1218	multi-exon	TRUE	canonical	3	282	junction_5	25.8444868395563	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTGCAGTTTTCTAGT	NA	False	NA	NA	False	NA	NA	NA	144425872	144395822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
tx.1424	chr11	+	1903	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	72.0831767821036	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	5049268	5056093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_5049478_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
tx.14240	chr3	+	2297	15	NNC	ENSMUSG00000028256.17	novel	2564	17	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	24.2331363624105	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGTATAAGTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	144824332	144859656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
tx.14241	chr3	+	2451	16	NNC	ENSMUSG00000028256.17	novel	2425	16	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	18.7538440503985	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCAAGTGTCTCGCTAT	NA	False	NA	NA	False	NA	NA	NA	144824326	144859675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
tx.14242	chr4	-	2854	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	35	-5	35	5	multi-exon	TRUE	canonical	0	0	junction_11	124.875606744325	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTCATTATTTTGAACT	NA	False	NA	NA	False	NA	NA	NA	9669127	9575261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
tx.14243	chr4	+	2983	4	NNC	ENSMUSG00000046667.15	novel	3069	3	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	25.0377492776186	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGGAAGAGAATTTCCT	8	False	NA	NA	False	NA	NA	NA	12140308	12146731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_12140447_12140540_12140606_12143409_12143460_12144001
tx.14244	chr4	-	1453	4	NNC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	26	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	127.017933991841	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCATGCATGTATTTCT	9	True	NA	NA	False	NA	NA	NA	21767186	21757385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_21758476_21759369_21759425_21759622_21759794_21767049
tx.14245	chr4	-	1118	8	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	-14	-16	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	718.854928454459	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTGTGTTTTCTCAT	1	True	NA	NA	False	NA	NA	NA	40948308	40936416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721_40948046_40948271
tx.14246	chr4	+	415	2	ISM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	68	35927	68	-35488	5prime_fragment	FALSE	canonical	3	562	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCTCTCTGAGCAGAC	-18	True	NA	NA	False	NA	NA	NA	40970973	40976681	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_40971060_40976352
tx.14247	chr4	+	3366	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	68	2	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGTCAGGCTATT	-18	True	NA	NA	False	NA	NA	NA	40970973	41012610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
tx.14248	chr4	-	1403	3	ISM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	3714	0	-21	0	3prime_fragment	FALSE	canonical	3	1694	junction_1	175	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	3713	False	NA	NA	False	NA	NA	NA	41094469	41092721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_41093703_41093781_41094000_41094265
tx.1425	chr11	+	1873	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	462	-2	-45	0	multi-exon	FALSE	canonical	3	72	junction_2	51.4605431374369	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	5049387	5056093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
tx.14250	chr4	-	3078	3	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	97	20850	55	2024	5prime_fragment	FALSE	canonical	3	64	junction_2	4	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGCTTATTTTGTGTGT	337	False	44072721	NA	False	NA	NA	NA	44072681	44057675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_44060228_44066754_44066961_44072361
tx.14251	chr4	+	1704	6	ISM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	32081	2	-19679	-2	3prime_fragment	FALSE	canonical	3	418	junction_3	53.8494196811813	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTCTGCTTTGTGTGCT	1722	False	NA	NA	False	NA	NA	NA	48617254	48663129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
tx.14252	chr4	-	3278	9	NNC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	-105	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.1761889217903	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTATTGTTGGTGATGT	NA	False	NA	NA	False	NA	NA	NA	82778015	82722303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777987
tx.14253	chr4	-	4100	12	FSM	ENSMUSG00000028521.18	ENSMUST00000036195.13	4021	12	-72	-7	-72	0	multi-exon	FALSE	canonical	3	35	junction_4	6.03022689155527	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTAGAATTCCTTCC	5586	False	NA	NA	False	NA	NA	NA	103072072	103027845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
tx.14254	chr4	+	1387	3	ISM	ENSMUSG00000028519.17	ENSMUST00000146078.8	2462	15	-33	135476	-33	-72471	5prime_fragment	FALSE	canonical	3	42	junction_1	3	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTTGTAGCCTGATT	NA	False	NA	NA	False	NA	NA	NA	104224753	104463518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_104224915_104336270_104336473_104462494
tx.14255	chr4	+	1975	5	FSM	ENSMUSG00000061887.15	ENSMUST00000132506.8	1128	5	-82	-765	-82	765	multi-exon	FALSE	canonical	3	191	junction_1	7.51664818918645	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACAGACATCAGTTAGAG	NA	False	NA	NA	False	NA	NA	NA	106768975	106868496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875
tx.14256	chr4	+	640	2	ISM	ENSMUSG00000034610.15	ENSMUST00000106673.8	679	3	691	-275	107	275	3prime_fragment	FALSE	canonical	3	164	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCACAGAGAAAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	108317313	108336625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_108317398_108336069
tx.14257	chr4	+	891	7	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	185339	1909	21142	-1909	3prime_fragment	FALSE	canonical	3	1161	junction_1	93.0567329942093	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	NA	False	NA	NA	NA	109719123	109819248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
tx.14258	chr4	+	2799	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	0	-7	0	7	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGTCTTTTCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	115594940	115631639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
tx.14259	chr4	-	717	7	ISM	ENSMUSG00000028677.20	ENSMUST00000128122.9	1330	11	662	5417	-55	636	internal_fragment	FALSE	canonical	0	0	junction_2	369.949283310864	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGGTTGGTTGGGA	9848	False	NA	NA	False	NA	NA	NA	117146365	117134567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
tx.1426	chr11	+	1829	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	299	1	-37	-1	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	132	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGTTCTGTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	5470957	5475892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
tx.14260	chr4	+	3287	14	FSM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	187	5	-95	4	multi-exon	FALSE	canonical	2	62	junction_6	13.9750411501337	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	NA	False	NA	NA	NA	117692434	117726497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
tx.14261	chr4	-	2436	2	FSM	ENSMUSG00000050854.10	ENSMUST00000150044.2	717	2	-1	-1718	-1	642	multi-exon	FALSE	canonical	3	10	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAAGGAGCTAAATGCCA	9090	False	NA	NA	False	NA	NA	NA	118400160	118397495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_118399569_118399797
tx.14262	chr4	+	1214	5	FSM	ENSMUSG00000028626.6	ENSMUST00000140119.2	752	5	37	-499	37	-4	multi-exon	FALSE	canonical	3	62	junction_1	4.82182538049648	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGACTTCTTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	120910232	120912515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
tx.14263	chr4	-	1181	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_9	309.335169215497	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGCCTCCTGCAAGT	NA	False	NA	NA	False	NA	NA	NA	123033747	123020909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033702
tx.14264	chr4	-	1814	4	NIC	ENSMUSG00000028907.8	novel	4008	6	NA	NA	4	-3060	intron_retention	FALSE	canonical	3	1436	junction_2	128.691707407881	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTGACAGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	124587389	124575649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_124577142_124577545_124577649_124579881_124579944_124587232
tx.14265	chr4	+	1229	5	NNC	ENSMUSG00000028847.9	novel	1336	5	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	162.187391618461	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATCCTGTCCTGTTTTCC	7654	False	NA	NA	False	NA	NA	NA	126156146	126169672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_126156257_126166470_126166569_126166767_126166868_126167682_126167866_126168934
tx.14266	chr4	-	311	3	FSM	ENSMUSG00000028795.16	ENSMUST00000141361.8	428	3	121	-4	121	3	multi-exon	FALSE	canonical	3	87	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGCTCTCCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	129514587	129513063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129513240_129514249_129514273_129514475
tx.14269	chr4	-	2850	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	-61	0	-61	0	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	NA	False	NA	NA	NA	135301002	135269198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
tx.1427	chr11	-	664	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	-3	334	0	9	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTCTCTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	5657690	5654316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
tx.14271	chr4	+	2015	18	ISM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	22197	2188	-2067	12	3prime_fragment	FALSE	canonical	3	555	junction_9	296.706430470175	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	NA	False	NA	NA	False	NA	NA	NA	137343714	137383654	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
tx.14272	chr4	-	512	3	NNC	ENSMUSG00000085823.8	novel	714	2	NA	NA	-8	403	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	4.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGTATTTGTGCGTT	NA	False	NA	NA	False	NA	NA	NA	137611256	137609277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_137609451_137610538_137610721_137611099
tx.14273	chr4	+	3324	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	15	22	15	0	multi-exon	FALSE	canonical	3	21	junction_1	26.2752524039045	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAACTACAGCTTAGTG	5084	False	NA	NA	False	NA	NA	NA	137944456	137970459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.14274	chr4	+	3127	12	NIC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.9615581863273	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACTACAGCTTAGTGA	5084	False	NA	NA	False	NA	NA	NA	137944456	137970460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_137944606_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.14275	chr4	-	912	7	NNC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2953	-4	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_6	35.5387112878337	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4182	False	NA	NA	False	NA	NA	NA	141135621	141131667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135593
tx.14276	chr4	+	743	4	ISM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	4271	7	4271	-7	3prime_fragment	FALSE	canonical	3	61	junction_1	3.29983164553722	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGACGCACAGATGAAT	NA	False	NA	NA	False	NA	NA	NA	148249348	148250874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_148249413_148249484_148249581_148250100_148250231_148250421
tx.14277	chr4	+	1150	6	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	431	14	16	-14	3prime_fragment	FALSE	canonical	3	3072	junction_5	98.0399918400649	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGACCTCTGACCTTTT	9147	False	NA	NA	False	NA	NA	NA	148676390	148679062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
tx.14278	chr4	-	1177	2	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	24955	-1	24955	1	3prime_fragment	FALSE	canonical	3	481	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATTTTCCTGCATTTA	NA	False	NA	NA	False	NA	NA	NA	149833779	149828491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_149829395_149833505
tx.14279	chr4	+	1281	2	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	353	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	NA	False	NA	NA	NA	154104448	154105970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_154104495_154104735
tx.1428	chr11	-	639	4	NNC	ENSMUSG00000020477.11	novel	995	4	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_3	1216.61890317205	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTCTCTCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	5657693	5654323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_5654733_5657297_5657410_5657486_5657556_5657644
tx.14280	chr4	-	3817	2	FSM	ENSMUSG00000086810.2	ENSMUST00000138077.2	3414	2	-391	-12	-391	12	multi-exon	FALSE	canonical	3	15	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGCTGAATAGTGATT	NA	False	NA	NA	False	NA	NA	NA	154740166	154730198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_154733095_154739245
tx.14281	chr4	-	1775	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_7	625.276037002042	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGTCTACACGAGTCA	NA	False	NA	NA	False	NA	NA	NA	155170802	155158565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167772_155170661
tx.14282	chr4	-	2259	17	NIC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-56	31	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	50.979009160634	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTCTGATGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	155445874	155346525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155441937_155442060_155445608
tx.14283	chr4	-	3605	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	38	-1	33	1	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7458	False	NA	NA	False	NA	NA	NA	155753617	155739137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
tx.14284	chr5	+	2883	13	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	-12	4	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.6829171678492	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGTATTTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	8472837	8504793	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_8473040_8474796_8474888_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
tx.14286	chr5	-	1762	8	FSM	ENSMUSG00000107283.4	ENSMUST00000200864.4	878	8	0	-884	0	-3	multi-exon	FALSE	canonical	3	9	junction_7	132.664376283514	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTGTCTTTAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	31311536	31298000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311434
tx.14287	chr5	-	2114	3	FSM	ENSMUSG00000043059.17	ENSMUST00000031562.11	2213	3	101	-2	101	0	multi-exon	FALSE	canonical	3	184	junction_2	7	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	NA	False	NA	NA	NA	31359285	31356324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31357492_31357578_31358167_31358926
tx.14288	chr5	-	2386	7	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	3	1	intron_retention	FALSE	canonical	3	685	junction_2	55.9833804703582	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	32942980	32893647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896718_32922116_32922293_32931739_32931811_32942892
tx.14289	chr5	+	1639	4	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	37749	-470	-2043	-239	3prime_fragment	FALSE	canonical	3	70	junction_1	10.6562449087639	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGTTGCGCTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	34621429	34643561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_34621549_34622917_34623792_34633069_34633152_34642997
tx.1429	chr11	+	904	5	ISM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	-16	4035	5	-1201	5prime_fragment	FALSE	canonical	3	13	junction_2	33.1313673125635	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGTAAAGACATTTTC	NA	False	NA	NA	False	NA	NA	NA	5712133	5730675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205
tx.14290	chr5	-	3408	6	ISM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	-32	13536	1	1935	5prime_fragment	FALSE	canonical	2	71	junction_2	6.46838465151849	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTAAACAAGGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	36853313	36771364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
tx.14291	chr5	-	1661	7	NIC	ENSMUSG00000029128.13	novel	1697	8	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_5	224.672663124724	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGATTTTCATTTA	NA	False	NA	NA	False	NA	NA	NA	41865515	41782316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41860780_41860878_41865247
tx.14292	chr5	-	1109	3	Genic_Genomic	ENSMUSG00000104701.2	novel	1039	1	NA	NA	-5912	-2	multi-exon	FALSE	canonical	1	1	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACTAGTAAGTACAAATG	9807	False	NA	NA	False	NA	NA	NA	43971997	43965048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr5_-_43965699_43967113_43967196_43971620
tx.14293	chr5	-	1217	2	Antisense	novelGene_ENSMUSG00000039191.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATAGTGAGCAGGTGTGT	9399	False	NA	NA	False	NA	NA	NA	53698162	53696746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_53697678_53697876
tx.14294	chr5	+	973	9	ISM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	20	4697	20	1202	5prime_fragment	FALSE	canonical	3	64	junction_1	144.423855370226	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAATCATTAGCACAGAC	NA	False	NA	NA	False	NA	NA	NA	53713195	53810003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948
tx.14295	chr5	+	1460	6	FSM	ENSMUSG00000067219.10	ENSMUST00000087212.8	4206	6	1	2745	1	710	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACTTTGCT	2040	False	NA	NA	False	NA	NA	NA	72805138	72825676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_72805277_72816024_72816292_72818098_72818156_72820876_72820968_72824118_72824280_72824930
tx.14296	chr5	-	756	5	NIC	ENSMUSG00000029235.15	novel	1181	6	NA	NA	55	-138	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	37.1483512420134	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTGACTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	76478925	76460111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_76460446_76466973_76467118_76472152_76472244_76472839_76472961_76478859
tx.14297	chr5	-	1383	6	NIC	ENSMUSG00000055923.17	novel	2264	13	NA	NA	-25	136	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	35.981106153091	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	77053300	77043952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053117
tx.14298	chr5	-	741	5	FSM	ENSMUSG00000029322.13	ENSMUST00000031264.12	744	5	0	3	0	-1	multi-exon	TRUE	canonical	1	1	junction_1	0.82915619758885	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTTTTGTTTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	100720111	100701593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_100701855_100704345_100704462_100707617_100707743_100710490_100710629_100720010
tx.14299	chr5	-	2549	3	FSM	ENSMUSG00000063406.12	ENSMUST00000119437.8	3436	3	0	887	0	-887	multi-exon	FALSE	canonical	3	235	junction_2	11.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	108280415	108271813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_108273951_108277883_108277982_108280101
tx.1430	chr11	+	665	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	11	1170	-10	-1170	multi-exon	FALSE	canonical	3	68	junction_2	16.5	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTATAATGAGCTTATT	NA	False	NA	NA	False	NA	NA	NA	5712139	5730706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_5712241_5715508_5715572_5730205
tx.14300	chr5	-	2021	9	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	45450	7	-3332	-1	3prime_fragment	FALSE	canonical	3	348	junction_7	23.0837469878701	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	NA	False	NA	NA	NA	108732155	108717286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097
tx.14301	chr5	-	846	4	Genic_Genomic	ENSMUSG00000106028.2	novel	489	6	NA	NA	625	1630	multi-exon	FALSE	canonical	3	31	junction_2	12.2292908852294	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGCAGTAAGGCTCTCG	NA	False	NA	NA	False	NA	NA	NA	109701397	109698127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr5_-_109698395_109699328_109699371_109700490_109700560_109700929
tx.14302	chr5	+	874	4	ISM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	3408	2300	-3	325	3prime_fragment	FALSE	canonical	3	126	junction_2	7.03957069398096	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAATTCCCGATAGCT	NA	False	NA	NA	False	NA	NA	NA	110804724	110806062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_110804784_110804953_110805018_110805116_110805252_110805446
tx.14303	chr5	+	3150	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	-12	-5	-12	5	multi-exon	FALSE	canonical	3	46	junction_2	4.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCGTTGTCTCATCCAG	703	False	NA	NA	False	NA	NA	NA	113873851	113878666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_113874111_113874881_113875234_113876127
tx.14304	chr5	-	1870	3	FSM	ENSMUSG00000041609.17	ENSMUST00000118576.8	1874	3	6	-2	1	0	multi-exon	FALSE	canonical	3	4	junction_2	14.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGCCTCAGTTCCTGG	NA	False	NA	NA	False	NA	NA	NA	115791039	115786233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115787629_115789877_115789999_115790685
tx.14305	chr5	+	2456	15	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	8809	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.30324500126429	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGCCGTGACGTGTTA	NA	False	NA	NA	False	NA	NA	NA	120800240	120817656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_120800376_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
tx.14306	chr5	+	2201	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	179	4	101	0	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	122296519	122313332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
tx.14307	chr5	-	430	2	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCGTCCAATTGATGT	6416	False	NA	NA	False	NA	NA	NA	122988032	122987515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_-_122987809_122987895
tx.14308	chr5	+	579	3	FSM	ENSMUSG00000061882.13	ENSMUST00000166983.3	622	3	38	5	38	-5	multi-exon	FALSE	canonical	3	8	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAAGTGTGTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	124068789	124074703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124068924_124072134_124072328_124074451
tx.14309	chr5	+	1446	7	FSM	ENSMUSG00000023707.14	ENSMUST00000119269.6	1474	7	34	-6	-2	-1	multi-exon	FALSE	canonical	2	14	junction_5	31.3421973277773	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTTGCTATTATTTA	NA	False	NA	NA	False	NA	NA	NA	124250417	124253545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252541_124252709_124252777
tx.1431	chr11	+	2351	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	-3	-347	-3	14	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGCATTCGTGCATT	NA	False	NA	NA	False	NA	NA	NA	5738484	5750976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
tx.14310	chr5	+	409	2	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAATCTGATTCTATT	NA	False	NA	NA	False	NA	NA	NA	124565036	124568762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_124565134_124568450
tx.14311	chr5	-	2094	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	260	264	260	-252	multi-exon	FALSE	canonical	3	916	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCGCCTCAGAGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	125466818	125463292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_125465329_125466760
tx.14312	chr5	+	3227	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	7	5	7	-5	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCAGTACGCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	125552884	125594469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
tx.14313	chr5	+	1325	2	NNC	ENSMUSG00000015944.10	novel	7367	9	NA	NA	7640	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGATAGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	134171436	134173172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_134171547_134171957
tx.14314	chr5	-	412	3	NNC	ENSMUSG00000085042.9	novel	604	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCCGTGCCCCTGAGT	NA	False	NA	NA	False	NA	NA	NA	135041634	135040967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_135041187_135041298_135041405_135041547
tx.14315	chr5	+	1667	4	ISM	ENSMUSG00000007207.11	ENSMUST00000156626.8	2114	7	1546	-1	1340	0	3prime_fragment	FALSE	canonical	3	18	junction_1	6.12825877028341	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCTGTTTGGAACA	7222	False	NA	NA	False	NA	NA	NA	135071459	135079954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_135071521_135074450_135074589_135077764_135077959_135078680
tx.14316	chr5	-	2412	19	ISM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	193889	0	-11	0	3prime_fragment	FALSE	canonical	3	30	junction_13	19.9951382979852	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	136402213	136276988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175
tx.14317	chr5	+	2883	19	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-131	-109	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_16	43.3148108561745	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAGTCCGTGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	137016100	137025393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137023056_137023144_137023786_137023913_137024959
tx.14318	chr5	+	2801	20	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-117	-7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	42.0605683834917	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAATATTTATTTGTGA	NA	False	NA	NA	False	NA	NA	NA	137016114	137025495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_137016229_137016458_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
tx.14319	chr5	+	842	3	NNC	ENSMUSG00000087244.2	novel	944	6	NA	NA	1017	258	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	4	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTGTGTTTTT	1930	False	NA	NA	False	NA	NA	NA	137027256	137028406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_137027514_137027633_137027818_137028005
tx.1432	chr11	+	2335	13	FSM	ENSMUSG00000020476.15	ENSMUST00000102928.5	2295	13	-26	-14	16	14	multi-exon	FALSE	canonical	3	125	junction_7	84.6740072277201	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGCATTCGTGCATT	NA	False	NA	NA	False	NA	NA	NA	5738503	5750976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747283_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
tx.14320	chr5	+	2806	3	FSM	ENSMUSG00000018143.11	ENSMUST00000018287.10	2849	3	38	5	17	-5	multi-exon	FALSE	canonical	3	22	junction_1	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTCTGGTGTCTGGAT	NA	False	NA	NA	False	NA	NA	NA	139777305	139788403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_139777468_139784893_139784974_139785839
tx.14321	chr5	-	3412	5	FSM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	-76	-1	-31	1	multi-exon	FALSE	canonical	3	25	junction_4	6.20483682299543	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTATGTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	143166561	143157939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165298_143166303
tx.14322	chr5	+	634	2	ISM	ENSMUSG00000089889.3	ENSMUST00000162890.2	600	3	-21	1412	-2	339	5prime_fragment	FALSE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGTACCAGCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	143315060	143317044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_143315109_143316458
tx.14323	chr5	-	931	2	FSM	ENSMUSG00000066621.13	ENSMUST00000136018.2	493	2	-13	-425	-13	425	multi-exon	FALSE	canonical	3	82	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTAAGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	144160389	144154712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_144155567_144160312
tx.14324	chr5	+	1784	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	-28	0	-5	0	multi-exon	FALSE	canonical	3	31	junction_6	266.097419631784	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	NA	False	NA	NA	NA	145104028	145118850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115567_145115739_145117945
tx.14325	chr5	+	4167	5	FSM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	-13	3	-13	-3	multi-exon	FALSE	canonical	3	27	junction_3	175.330402383614	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTAGACTCTTTGTTT	1318	False	NA	NA	False	NA	NA	NA	145168551	145184108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145179729_145179835_145180384
tx.14326	chr5	-	2231	4	ISM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	490	122	415	-122	3prime_fragment	FALSE	canonical	3	117	junction_2	5.09901951359278	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTATTTTTTGTGT	3250	False	NA	NA	False	NA	NA	NA	146157296	146146888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211
tx.14327	chr5	-	1992	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	-12	2947	0	0	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTGCATTTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	146900607	146891329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
tx.14328	chr5	+	1038	1	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTATGAATTGTGTTTT	5257	False	NA	NA	False	NA	NA	NA	150806109	150807147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_150806100_150807100
tx.14329	chr6	-	1933	10	NIC	ENSMUSG00000032667.18	novel	2409	9	NA	NA	-32	-477	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	3.91893157523298	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTTGTTTGTTTA	-23	True	NA	NA	False	NA	NA	NA	5298362	5264623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277871_5277928_5278718_5278813_5289012_5289084_5298211
tx.1433	chr11	-	880	3	FSM	ENSMUSG00000020475.4	ENSMUST00000020768.4	840	3	-38	-2	-38	2	multi-exon	FALSE	canonical	3	39	junction_1	6	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGTTTCATATAGCTGA	8610	False	NA	NA	False	NA	NA	NA	5753771	5751637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_5751840_5752998_5753180_5753274
tx.14330	chr6	-	2828	4	FSM	ENSMUSG00000029569.10	ENSMUST00000149123.3	3337	4	84	425	3	-425	multi-exon	TRUE	canonical	3	13	junction_3	103.721850264167	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTTGTGTGCATCTT	15	True	NA	NA	False	NA	NA	NA	13608015	13581110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13607828
tx.14331	chr6	-	1457	7	ISM	ENSMUSG00000003500.14	ENSMUST00000160878.8	2314	13	7617	3	-1212	-2	3prime_fragment	FALSE	canonical	3	187	junction_6	26.9284030140833	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTGATCCTGTTTC	7830	False	NA	NA	False	NA	NA	NA	29204631	29200438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567
tx.14334	chr6	-	659	4	NNC	ENSMUSG00000029918.10	novel	1107	3	NA	NA	0	4	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	528.725721796178	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTAAGATTGGAATGGC	NA	False	NA	NA	False	NA	NA	NA	39787827	39779121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_39779479_39780084_39780116_39782304_39782546_39787797
tx.14335	chr6	+	2247	10	FSM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	189	169	-16	1	multi-exon	FALSE	canonical	3	26	junction_4	4.64545443563708	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTAGTACTTGATTT	NA	False	NA	NA	False	NA	NA	NA	42326950	42335327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
tx.14337	chr6	+	3063	3	NNC	ENSMUSG00000052751.17	novel	3057	3	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	2	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGCTGGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	48570822	48576013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_48570987_48571795_48571911_48573229
tx.14338	chr6	+	3148	23	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-37	-2	combination_of_known_junctions	FALSE	canonical	2	36	junction_21	64.6919113060493	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAAATCATTCATATTC	136	False	NA	NA	False	NA	NA	NA	49372500	49446432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
tx.14339	chr6	+	1028	2	ISM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	-58	4482	-4	-4482	5prime_fragment	FALSE	canonical	3	220	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAATTCTCTTCATTT	774	False	NA	NA	False	NA	NA	NA	52079924	52084686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_52080017_52083750
tx.1434	chr11	-	1574	11	FSM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	66	6	-14	2	multi-exon	FALSE	canonical	3	869	junction_10	541.870242770352	844	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAACCTTGTTCACTTGG	9571	False	NA	NA	False	NA	NA	NA	5828226	5822185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
tx.14340	chr6	-	3587	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	229	0	-228	0	multi-exon	FALSE	canonical	3	176	junction_3	4.02768199119819	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9932	False	NA	NA	False	NA	NA	NA	56774492	56754508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774443
tx.14341	chr6	+	2971	9	NNC	ENSMUSG00000062190.13	novel	2245	10	NA	NA	275	3	intron_retention	FALSE	canonical	3	6	junction_1	23.0349598436811	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGGAGTCTTAATATTT	NA	False	NA	NA	False	NA	NA	NA	57680346	57716427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_57680477_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
tx.14342	chr6	+	2270	17	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-75	-62	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	52.4486355875918	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGTTCTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	58572884	58669434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_58573003_58573993_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
tx.14343	chr6	+	602	3	FSM	ENSMUSG00000029913.15	ENSMUST00000173538.2	1938	3	28	1308	25	-1308	multi-exon	FALSE	canonical	3	137	junction_2	4.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTGCCTTCAAGTACTT	NA	False	NA	NA	False	NA	NA	NA	65756033	65808606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_65756178_65771283_65771368_65808232
tx.14344	chr6	+	245	2	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCCATGGTAAGTAAAGA	993	False	NA	NA	False	NA	NA	NA	67897144	67898481	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_67897263_67898354
tx.14345	chr6	-	603	2	FSM	ENSMUSG00000050732.10	ENSMUST00000142613.2	2076	2	1490	-17	1490	12	multi-exon	FALSE	canonical	3	289	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTCTTTCAAGTGT	9277	False	NA	NA	False	NA	NA	NA	72365404	72362193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72362637_72365244
tx.14346	chr6	-	1286	5	FSM	ENSMUSG00000030035.15	ENSMUST00000146328.4	981	5	-43	-262	-24	0	multi-exon	TRUE	canonical	3	42	junction_4	48.7769156466458	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	83098411	83096025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097855_83098183
tx.14348	chr6	+	1474	2	FSM	ENSMUSG00000030016.15	ENSMUST00000204580.3	3300	2	0	1826	0	895	multi-exon	FALSE	canonical	3	291	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTGGCTACCAAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	83891352	83906999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_83891462_83905634
tx.1435	chr11	-	1512	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	880.90807692971	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAACCTTGTTCACTTGG	9570	False	NA	NA	False	NA	NA	NA	5828227	5822185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823504_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
tx.14350	chr6	+	902	3	ISM	ENSMUSG00000046679.17	ENSMUST00000050497.14	2534	10	-7	24423	-7	144	5prime_fragment	FALSE	canonical	3	15	junction_1	10	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCCACGGGGCCCCTG	1446	False	NA	NA	False	NA	NA	NA	86415348	86422947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_86415470_86420708_86420958_86422415
tx.14351	chr6	+	2512	10	NIC	ENSMUSG00000046679.17	novel	2922	10	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_3	9.78661217060213	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	1805	False	NA	NA	False	NA	NA	NA	86415707	86447370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_86415830_86420708_86420958_86422415_86423251_86424322_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
tx.14352	chr6	+	1100	2	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTTGGTGTCCCTACA	28	False	NA	NA	False	NA	NA	NA	88193748	88195058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_88194640_88194849
tx.14353	chr6	-	2423	10	ISM	ENSMUSG00000030094.9	ENSMUST00000150279.3	4347	13	-94	5436	-1	-5436	5prime_fragment	FALSE	canonical	3	87	junction_8	18.5099239315189	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTAGAAGTGTTCCTCG	368	False	NA	NA	False	NA	NA	NA	91492871	91474690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
tx.14354	chr6	+	2357	5	ISM	ENSMUSG00000030105.9	ENSMUST00000204483.2	695	7	20082	-1774	20082	-1731	3prime_fragment	FALSE	canonical	3	458	junction_4	28.1547065337219	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGACAATTTTACCTTA	8684	False	NA	NA	False	NA	NA	NA	108791939	108800508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
tx.14356	chr6	+	1410	5	FSM	ENSMUSG00000059659.8	ENSMUST00000204081.2	907	5	-503	0	79	0	multi-exon	FALSE	canonical	2	4	junction_3	4.26468052730799	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAATTGTTATTCACTT	NA	False	NA	NA	False	NA	NA	NA	128415798	128480244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_128416351_128416477_128416660_128465853_128466007_128479128_128479327_128479919
tx.14357	chr6	-	1235	5	ISM	ENSMUSG00000030243.17	ENSMUST00000141504.8	3671	6	54	5195	54	-25	5prime_fragment	FALSE	canonical	3	123	junction_2	24.7840674627875	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTCTTTATTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	142312461	142307871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392
tx.14358	chr6	+	1761	17	FSM	ENSMUSG00000030263.14	ENSMUST00000132948.2	1761	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	14.1684894660652	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	NA	False	NA	NA	NA	145091202	145120654	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_145091249_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
tx.14359	chr6	-	1669	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-2	25	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	258.951618702032	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAATATTAAGCCATATT	NA	False	NA	NA	False	NA	NA	NA	148113522	148082688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_148083238_148083385_148083469_148084586_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
tx.1436	chr11	-	279	3	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	1378	0	1378	0	3prime_fragment	FALSE	canonical	3	94	junction_2	1.5	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	NA	False	NA	NA	NA	5847404	5846636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_5846782_5847125_5847175_5847319
tx.14360	chr6	-	2762	7	NIC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	2	21	junction_6	1019.83555319255	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGTCTCATGACTT	NA	False	NA	NA	False	NA	NA	NA	148847967	148822559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148843430_148843521_148847789
tx.14361	chr7	-	3416	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9536	False	NA	NA	False	NA	NA	NA	3218999	3204497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
tx.14362	chr7	-	2233	12	FSM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	-12	3	-12	-3	multi-exon	FALSE	canonical	2	8	junction_9	6.85022772137618	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCGGTCTCCAGTGCCA	NA	False	NA	NA	False	NA	NA	NA	4535464	4525934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535185_4535275_4535376
tx.14363	chr7	+	1815	5	FSM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	28	2040	-2	178	multi-exon	FALSE	canonical	2	8	junction_1	5.71729831301464	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATTGGTGAGTTCTTGA	2982	False	NA	NA	False	NA	NA	NA	6366306	6382668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_6366347_6374304_6374396_6376125_6376253_6378517_6378614_6381207
tx.14364	chr7	+	1833	4	FSM	ENSMUSG00000070828.11	ENSMUST00000145237.8	1829	4	-1	-3	-1	3	multi-exon	FALSE	canonical	3	19	junction_1	4.49691252107735	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTTGTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	11131840	11136248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_11131924_11132578_11133051_11134886_11135047_11135130
tx.14365	chr7	-	367	2	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCCTGCTTCATAACTG	NA	False	NA	NA	False	NA	NA	NA	11285369	11270080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_11270242_11285163
tx.14366	chr7	-	1186	3	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-137	-5631	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_2	1	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGAGTGTGAGTGGAG	NA	False	NA	NA	False	NA	NA	NA	23937122	23933103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_23933903_23936042_23936101_23936793
tx.14367	chr7	+	1195	3	NNC	ENSMUSG00000064264.15	novel	1045	3	NA	NA	391	-13	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	126	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	NA	False	NA	NA	NA	24206945	24215092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_24207302_24209970_24210179_24214461
tx.14368	chr7	-	2554	14	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24741	-323	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	23.3121346363171	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGTGTCTTGTGCCTT	NA	False	NA	-57	True	NA	NA	NA	26410603	26364974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26392289_26392411_26392894_26393053_26410317
tx.14369	chr7	+	2004	4	ISM	ENSMUSG00000063160.13	ENSMUST00000134215.2	3153	9	12580	-160	12580	0	3prime_fragment	FALSE	canonical	3	88	junction_2	6.79869268479038	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGGGAAATCAAGGTG	NA	False	NA	NA	False	NA	NA	NA	26973382	26981566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_26973570_26976051_26976358_26978928_26979052_26980178
tx.1437	chr11	-	468	4	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	756	0	756	0	3prime_fragment	FALSE	canonical	3	77	junction_3	8.80656320908194	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	NA	False	NA	NA	NA	5848026	5846636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831
tx.14370	chr7	-	3991	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-42	2214	-42	1644	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	NA	False	NA	NA	NA	27713582	27686492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
tx.14371	chr7	+	1138	7	NNC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	2	-6287	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	92.0048307910454	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCCTGAAAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	29683381	29708230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29707938
tx.14372	chr7	+	2524	17	ISM	ENSMUSG00000023072.15	ENSMUST00000141704.8	2825	20	27	8230	7	-2117	5prime_fragment	FALSE	canonical	2	50	junction_16	33.5018073206506	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTCTGTACTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	35096486	35129882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
tx.14374	chr7	-	625	5	FSM	ENSMUSG00000040212.13	ENSMUST00000038876.13	736	5	107	4	5	1	multi-exon	FALSE	canonical	3	47	junction_4	7.77817459305202	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGACTCGGCTCCTCTTC	4465	False	NA	NA	False	NA	NA	NA	45570721	45567450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570665
tx.14375	chr7	+	1232	8	NIC	ENSMUSG00000030851.16	novel	872	6	NA	NA	50	-102	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.34248118673448	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAAGGCTAGAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	46510880	46527422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_46510986_46511186_46511320_46515832_46515951_46519022_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
tx.14376	chr7	-	3691	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	NA	False	NA	NA	NA	48530789	48516176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
tx.14377	chr7	+	1873	11	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	7819	11	1964	-11	3prime_fragment	FALSE	canonical	3	505	junction_3	52.4457815272115	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGCATCACACTGAAT	NA	False	NA	NA	False	NA	NA	NA	49435912	49508002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
tx.14378	chr7	+	2605	18	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	-7	4966	4	3093	5prime_fragment	FALSE	canonical	3	67	junction_15	9.6774986044305	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCCTGGAAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	55443905	55471881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725
tx.14379	chr7	+	2617	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-8	-23	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	44.7788215247215	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTCCACATGTTAATAG	NA	False	NA	NA	False	NA	NA	NA	67925734	68012812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67999981_68000165_68003356_68003492_68007932_68008037_68010989
tx.1438	chr11	-	741	6	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	70	0	70	0	3prime_fragment	FALSE	canonical	3	38	junction_4	23.9115035077261	28	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	NA	False	NA	NA	NA	5848712	5846636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831_5847937_5848159_5848236_5848425
tx.14380	chr7	-	612	5	FSM	ENSMUSG00000101970.9	ENSMUST00000187421.7	519	5	135	-228	135	0	multi-exon	FALSE	canonical	3	58	junction_4	79.8780320238299	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGGGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	73207586	73193783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207522
tx.14381	chr7	-	748	2	ISM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	-8	10303	-8	-10303	5prime_fragment	FALSE	canonical	3	32	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCAGCCGGACCACTCC	NA	False	NA	NA	False	NA	NA	NA	75431855	75429812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_75430505_75431799
tx.14382	chr7	-	1140	4	ISM	ENSMUSG00000039176.18	ENSMUST00000154403.8	2167	8	3100	7	-58	-7	3prime_fragment	FALSE	canonical	3	315	junction_2	42.967688118192	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGTCTTGTCTACTGA	NA	False	NA	NA	False	NA	NA	NA	79101728	79099136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607
tx.14383	chr7	+	1681	8	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	37452	-5	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	148.870715037976	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGACTGGTTATTTTCA	3013	False	NA	NA	False	NA	NA	NA	81862433	81956622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_81862770_81909339_81909409_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
tx.14384	chr7	+	3610	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	-18	18	-6	-18	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGAACATAACTTCCAA	NA	False	NA	NA	False	NA	NA	NA	82297830	82427042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
tx.14387	chr7	-	1434	8	ISM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	79	13781	-20	417	5prime_fragment	FALSE	canonical	3	561	junction_2	33.487737627803	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCCAGGAGTTTGAGAC	NA	False	NA	NA	False	NA	NA	NA	99770693	99745098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
tx.14388	chr7	+	2437	2	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	6918	-245	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTTCTTACTCTGTA	NA	False	NA	NA	False	NA	NA	NA	103881631	103884114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_103882780_103882825
tx.14389	chr7	+	3335	11	FSM	ENSMUSG00000016626.11	ENSMUST00000084763.5	3272	11	-53	-10	-53	1	multi-exon	FALSE	canonical	2	8	junction_7	2.19089023002066	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTCATGTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	106766143	106797310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_106766289_106780365_106780453_106780877_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353_106796525_106796983
tx.1439	chr11	+	2455	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	86	0	86	0	multi-exon	FALSE	canonical	3	192	junction_4	17.3205080756888	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTGTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	5905778	5917780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
tx.14390	chr7	-	383	2	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAACATGAATAATTTAG	NA	False	NA	NA	False	NA	NA	NA	109389001	109388260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_109388571_109388928
tx.14391	chr7	-	3385	4	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	-6	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	275.587050171488	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATTGTTGTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	118454913	118443007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_118445318_118449843_118449913_118451625_118452564_118454845
tx.14392	chr7	+	1749	5	ISM	ENSMUSG00000030917.14	ENSMUST00000118737.3	1395	6	39	6	39	0	3prime_fragment	FALSE	canonical	0	0	junction_1	32.4759526419165	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTTTTCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	119701751	119720209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_119702180_119703852_119704053_119714608_119714778_119715442_119715582_119719396
tx.14393	chr7	-	3363	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-27	0	2	0	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	122969136	122878493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
tx.14394	chr7	+	1702	7	NNC	ENSMUSG00000030682.5	novel	1838	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	146.258523018508	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	NA	False	NA	NA	NA	126575524	126579671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_126575733_126575902_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
tx.14395	chr7	-	1673	4	ISM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	1414	0	20	0	3prime_fragment	FALSE	canonical	0	0	junction_1	326.589446655379	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	1670	False	NA	NA	False	NA	NA	NA	126624284	126621301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047
tx.14396	chr7	+	3820	20	ISM	ENSMUSG00000030830.19	ENSMUST00000106306.9	5195	31	13884	0	657	0	3prime_fragment	FALSE	canonical	1	2	junction_5	3.43922300056938	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGGGGAAAGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	126909346	126934310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_126909509_126909797_126909936_126910389_126910588_126910714_126910846_126913230_126913392_126913483_126913636_126916448_126916539_126921066_126921121_126921223_126921295_126921652_126921795_126923716_126923828_126924193_126924274_126924368_126924456_126926880_126926957_126927358_126927473_126927670_126927728_126927824_126927927_126928596_126928693_126929300_126929412_126932623
tx.14397	chr7	-	985	3	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	25.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6930	False	NA	NA	False	NA	NA	NA	127021194	127018138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_127018814_127019181_127019278_127020980
tx.14398	chr7	+	1522	10	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	38.5313724991294	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGCCATGTCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	127172554	127182474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
tx.14399	chr7	+	1847	6	NIC	ENSMUSG00000042289.12	novel	1899	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	12	junction_1	30.7805133160576	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACCTTTTACCC	1883	False	NA	NA	False	NA	NA	NA	127399774	127402973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_127399887_127400298_127400419_127400632_127400789_127401005_127401286_127401407_127401571_127401957
tx.144	chr1	-	3159	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	69	65	2	-65	multi-exon	TRUE	canonical	3	57	junction_1	6.25316246521123	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTTACAAATTTCCCA	755	False	NA	NA	False	NA	NA	NA	53824314	53794729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
tx.1440	chr11	-	2816	2	ISM	ENSMUSG00000053838.15	ENSMUST00000109805.8	2635	3	5999	-278	5999	-17	3prime_fragment	FALSE	canonical	3	350	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTGGGGAGGAAAGGG	2993	False	NA	NA	False	NA	NA	NA	6063410	6055707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_6058356_6063242
tx.14400	chr7	+	1721	7	FSM	ENSMUSG00000042289.12	ENSMUST00000106272.8	1725	7	2	2	2	-2	multi-exon	FALSE	canonical	0	0	junction_5	32.540999779765	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCTACCTTTTACC	1896	False	NA	NA	False	NA	NA	NA	127399787	127402972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401500_127401571_127401957
tx.14401	chr7	-	635	7	ISM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	8320	0	147	0	3prime_fragment	FALSE	canonical	3	1333	junction_1	71.7998761992124	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	130140791	130134255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740
tx.14402	chr7	-	2172	5	NIC	ENSMUSG00000040177.11	novel	6773	6	NA	NA	-11	476	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	36.9932426261878	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACGTTGTTTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	130964450	130944438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_130945534_130952379_130952832_130959188_130959396_130963461_130963666_130964236
tx.14403	chr7	+	2140	9	FSM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	-12	0	-12	0	multi-exon	FALSE	canonical	3	44	junction_4	579.695609781547	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTGTGTTACCTTGG	NA	False	NA	NA	False	NA	NA	NA	131162096	131173624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
tx.14404	chr7	+	683	4	NIC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-28	-2078	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	91.8634251968045	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGATGTGGCTGCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	136496314	136729917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_136496417_136552996_136553134_136723217_136723358_136729613
tx.14405	chr7	+	705	4	NIC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-26	-2078	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	106.094297678999	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGATGTGGCTGCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	136496316	136729917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_136496417_136687677_136687839_136723217_136723358_136729613
tx.14406	chr7	+	496	3	NIC	ENSMUSG00000025461.12	novel	3210	14	NA	NA	3733	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTCTGTTACCAGAT	8574	False	NA	NA	False	NA	NA	NA	139808588	139811058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_139808732_139810212_139810385_139810877
tx.14408	chr7	+	807	4	NIC	ENSMUSG00000045752.14	novel	895	4	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	63.0202789231812	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	NA	False	NA	NA	NA	142623168	142624830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_142623251_142623491_142623558_142623672_142624030_142624528
tx.14409	chr7	+	1698	3	ISM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	2491	0	-37	0	3prime_fragment	FALSE	canonical	3	87	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGTCTGGGATCATT	NA	False	NA	NA	False	NA	NA	NA	144471362	144474871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_144471418_144472960_144473079_144473346
tx.1441	chr11	-	3401	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	232	294	232	1	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTCTGTCTGTGAC	9690	False	NA	NA	False	NA	NA	NA	6150183	6055984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
tx.14410	chr8	+	645	2	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGCAGCCTTGGTAT	NA	False	NA	NA	False	NA	NA	NA	12586905	12589204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_12587060_12588713
tx.14411	chr8	-	1381	9	NIC	ENSMUSG00000038515.11	novel	1271	9	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	164.244434837227	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGTTCTCCATTTTTTC	3648	False	NA	NA	False	NA	NA	NA	13250609	13226924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_13227143_13228805_13228948_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
tx.14412	chr8	-	2756	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	NA	False	NA	NA	NA	13337849	13305963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
tx.14413	chr8	+	426	3	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCCTGCTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	19756575	19757328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_19756598_19756704_19756785_19757004
tx.14414	chr8	+	2340	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-105	-2739	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	19834656	20043149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
tx.14415	chr8	+	1231	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-20	-3596	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	36	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCAGTGTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	19834741	20042292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
tx.14416	chr8	+	2344	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	9	12349	9	-2739	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	20016474	20043149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
tx.14417	chr8	+	2177	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	9	-2739	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	26	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	20016474	20043149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
tx.14418	chr8	+	1370	4	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	-109	303	multi-exon	FALSE	canonical	3	112	junction_3	241.687125570781	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGGCAGGAAGGGGATG	NA	False	NA	NA	False	NA	NA	NA	20697875	20727569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717493_20727081
tx.14419	chr8	-	1314	8	NNC	ENSMUSG00000052906.8	novel	2808	8	NA	NA	0	-1423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.8089298606087	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATGTGAACTGTCGT	4670	False	NA	NA	False	NA	NA	NA	34131995	34111036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_34111658_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
tx.1442	chr11	-	465	2	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	234	87560	234	-70326	5prime_fragment	FALSE	canonical	3	343	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGCACACAGTGACCCAT	9692	False	NA	NA	False	NA	NA	NA	6150181	6143250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_6143477_6149942
tx.14423	chr8	+	3609	12	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-34	-2	combination_of_known_junctions	FALSE	canonical	3	90	junction_10	11.7353742277127	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1449	False	NA	NA	False	NA	NA	NA	70687232	70715753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
tx.14424	chr8	-	932	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_3	293.880077582677	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	71213581	71211294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_71211671_71211754_71211884_71212036_71212114_71213050_71213185_71213365
tx.14425	chr8	+	1160	2	Antisense	novelGene_ENSMUSG00000002908.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAGGAATCCTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	71304873	71306118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr8_+_71305241_71305325
tx.14426	chr8	-	2658	8	NNC	ENSMUSG00000034911.9	novel	2438	13	NA	NA	-943	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.14934395500694	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTATGGTAGAGAGCTCT	NA	False	NA	NA	False	NA	NA	NA	71843873	71836920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_71838438_71838559_71838683_71838830_71838917_71839993_71840222_71841399_71841650_71842664_71842830_71843284_71843426_71843725
tx.14427	chr8	+	2455	7	FSM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	-4	-41	2	5	multi-exon	FALSE	canonical	3	94	junction_6	8.31998931623246	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTCCATGTCTCATC	NA	False	NA	NA	False	NA	NA	NA	71858655	71862553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
tx.14428	chr8	+	1481	3	Antisense	novelGene_ENSMUSG00000083922.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	73175523	73193330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr8_+_73175625_73188725_73189100_73192324
tx.14429	chr8	+	962	2	ISM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	6365	30437	175	233	internal_fragment	FALSE	canonical	3	83	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGGAAGACAAAGACA	NA	False	NA	NA	False	NA	NA	NA	75726671	75728169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_75726742_75727277
tx.1443	chr11	-	1926	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	25	5	-1	-5	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	424	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGGTGGTGTTGTCTGG	4514	False	NA	NA	False	NA	NA	NA	6217747	6208923	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
tx.14430	chr8	-	2620	13	FSM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	433	6021	433	-6021	multi-exon	FALSE	canonical	1	1	junction_5	3.65433532488012	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCCAAACTCCTTG	4739	False	NA	NA	False	NA	NA	NA	80784202	80698502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
tx.14431	chr8	-	2729	13	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	21878	1467	-40	-1467	3prime_fragment	FALSE	canonical	3	1409	junction_7	117.257788180099	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAATAAATATAACTTTTA	NA	False	NA	NA	False	NA	NA	NA	81444248	81426602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150
tx.14432	chr8	-	592	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	758	1	11	-1	multi-exon	FALSE	canonical	3	145	junction_2	17	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTGCAAGCTATTTT	8291	False	NA	NA	False	NA	NA	NA	84738029	84736851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84737122_84737339_84737402_84737769
tx.14433	chr8	+	1417	11	ISM	ENSMUSG00000003808.19	ENSMUST00000156970.8	1708	13	4185	-1	4185	0	3prime_fragment	FALSE	canonical	3	551	junction_7	49.8413482963693	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	85587833	85595886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
tx.14434	chr8	+	1354	9	NNC	ENSMUSG00000060038.15	novel	1333	9	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	87.6366789649174	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	85798366	85801791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800307_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
tx.14435	chr8	-	1002	3	Antisense	novelGene_ENSMUSG00000110341.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAACTAAAGCATTGATTA	NA	False	NA	NA	False	NA	NA	NA	86333844	86329345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr8_-_86330197_86333140_86333237_86333789
tx.14436	chr8	+	4611	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	6	734	0	1	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	86567636	86787271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
tx.14437	chr8	+	556	5	NIC	ENSMUSG00000097248.10	novel	447	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	86.1434124004848	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	206	False	NA	NA	False	NA	NA	NA	88199740	88252182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_88199859_88240436_88240525_88248363_88248442_88250923_88251056_88252042
tx.14438	chr8	+	1586	4	NIC	ENSMUSG00000036810.17	novel	1616	5	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	70.0333254006024	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTAGAGATTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	88845383	88861741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_88845498_88846407_88846480_88851709_88851784_88860415
tx.14439	chr8	-	1737	10	NNC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	1	-314	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	118.014228060397	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTAATGCTCCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	91860624	91850510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_91851310_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
tx.1444	chr11	-	1981	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	17	5	12	-5	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACTAAATTCTCCCTTT	5355	False	NA	NA	False	NA	NA	NA	6224853	6220373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
tx.14440	chr8	+	1659	3	ISM	ENSMUSG00000055932.16	ENSMUST00000125471.8	3887	4	-3	34052	-3	1250	5prime_fragment	FALSE	canonical	3	300	junction_1	9.5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTCATGGTACTCTTT	NA	False	NA	NA	False	NA	NA	NA	92040159	92137342	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_92040249_92128434_92128513_92135850
tx.14441	chr8	+	2646	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-247	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	76.1876630433038	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3499	False	NA	NA	False	NA	NA	NA	105897058	105944621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_105897202_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
tx.14442	chr8	-	935	4	NNC	ENSMUSG00000014837.16	novel	3313	7	NA	NA	5320	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.5426385841741	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTTGGGTGTCTGGT	1084	False	NA	NA	False	NA	NA	NA	106010362	106008312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_106008777_106009618_106009717_106009806_106010113_106010295
tx.14443	chr8	+	1321	3	NNC	ENSMUSG00000005699.17	novel	1273	3	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	106427787	106430126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_106427999_106428805_106429029_106429239
tx.14444	chr8	-	5166	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	142	0	-3	0	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	NA	False	NA	NA	NA	106553840	106494939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
tx.14445	chr8	+	2382	2	ISM	ENSMUSG00000000303.13	ENSMUST00000167688.2	3203	17	-11	62869	-11	-47426	5prime_fragment	FALSE	canonical	3	854	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGGAAAAAGGAAGGAAGG	5066	False	NA	NA	False	NA	NA	NA	107329999	107333125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_107330175_107330918
tx.14446	chr8	+	3810	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	-3	602	-3	-602	multi-exon	FALSE	canonical	3	69	junction_2	14.9330686662985	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTGGAATGATCAGCC	1110	False	NA	NA	False	NA	NA	NA	107409696	107577469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
tx.14447	chr8	+	2381	5	FSM	ENSMUSG00000044676.11	ENSMUST00000212754.2	4863	5	-46	2528	-30	-797	multi-exon	FALSE	canonical	3	11	junction_2	6.21992765231236	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAACCCACCAACCAAAC	905	False	NA	NA	False	NA	NA	NA	110806347	110816845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_110806637_110809309_110809375_110810288_110810416_110810975_110811084_110815053
tx.14448	chr8	+	3554	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	-7	-2	-7	2	multi-exon	TRUE	canonical	3	60	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTGTTTCATT	3633	False	NA	NA	False	NA	NA	NA	110944613	110951120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_110944719_110947671
tx.14449	chr8	-	2610	9	NNC	ENSMUSG00000031949.18	novel	2762	9	NA	NA	21	-106	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_8	15.189943219117	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAGAACAGGAGTGA	NA	False	NA	NA	False	NA	NA	NA	112718913	112697602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717020_112718812
tx.1445	chr11	+	818	2	FSM	ENSMUSG00000020456.18	ENSMUST00000125929.2	779	2	-26	-13	-18	13	multi-exon	FALSE	canonical	3	605	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCTCTTGTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	6241614	6247690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_6241694_6246951
tx.14450	chr8	+	2194	15	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	94320	0	94320	0	3prime_fragment	TRUE	canonical	3	114	junction_1	26.7940939273519	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	9936	False	NA	NA	False	NA	NA	NA	118319349	118361881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
tx.14451	chr8	-	3219	15	FSM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	16	1	0	-1	multi-exon	FALSE	canonical	1	17	junction_9	12.1866856085832	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGTGTGTAAAGCCCA	1080	False	NA	NA	False	NA	NA	NA	120331945	120324714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
tx.14452	chr8	+	2181	5	FSM	ENSMUSG00000031828.10	ENSMUST00000034287.10	2181	5	-6	6	0	-6	multi-exon	FALSE	canonical	3	4	junction_3	6.86931583201704	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTATCTTGTTTGAATA	NA	False	NA	NA	False	NA	NA	NA	120589004	120603728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_120589187_120591741_120591819_120596360_120597432_120601113_120601272_120603035
tx.14455	chr8	+	994	3	FSM	ENSMUSG00000031967.16	ENSMUST00000133606.2	419	3	-63	-512	-26	512	multi-exon	FALSE	canonical	3	684	junction_2	47.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGACTGGAGATTTTTG	7469	False	NA	NA	False	NA	NA	NA	124204615	124208544	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_124204787_124207087_124207176_124207809
tx.14456	chr8	+	2300	7	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	34416	3	-4263	-3	3prime_fragment	FALSE	canonical	3	537	junction_6	28.7614711414806	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTTTTGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	129446550	129459678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
tx.14457	chr8	-	3807	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	-16	-1454	12	-309	multi-exon	FALSE	canonical	3	23	junction_3	18.4451137763426	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTGGTTATTTGATC	NA	False	NA	NA	False	NA	NA	NA	129960515	129943143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
tx.14458	chr9	+	2031	4	FSM	ENSMUSG00000031937.8	ENSMUST00000034413.8	1991	4	-35	-5	-35	5	multi-exon	FALSE	canonical	3	5	junction_3	3.68178700572909	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTTTGTTTTTCAGTGA	NA	False	NA	NA	False	NA	NA	NA	15150305	15170717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_15150655_15168525_15168853_15168946_15169088_15169503
tx.14459	chr9	+	4135	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	-147	0	-121	0	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	NA	False	NA	NA	NA	19533276	19561027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
tx.1446	chr11	+	4145	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-18	0	-18	0	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	6241614	6306642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
tx.14460	chr9	-	2037	13	ISM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	6092	5	6076	-5	3prime_fragment	FALSE	canonical	3	91	junction_10	30.2002575412124	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTTTCCCCATCCCT	NA	False	NA	NA	False	NA	NA	NA	21193173	21184757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110
tx.14461	chr9	-	1768	11	FSM	ENSMUSG00000003309.15	ENSMUST00000115433.11	2586	11	-27	845	-27	3	multi-exon	FALSE	canonical	2	2	junction_6	7.33552997403732	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGTGCTTCTTGGGT	1292	False	NA	NA	False	NA	NA	NA	21223660	21206753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214068_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
tx.14462	chr9	+	3454	22	FSM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	24	0	-17	0	multi-exon	FALSE	canonical	3	79	junction_1	41.7821257447013	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6604	False	NA	NA	False	NA	NA	NA	21232017	21266324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
tx.14463	chr9	+	994	6	ISM	ENSMUSG00000033335.18	ENSMUST00000169194.9	1591	15	-298	18659	0	5067	5prime_fragment	FALSE	canonical	3	562	junction_1	70.2156677672441	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGTATAGCGGAGGTT	5879	False	NA	NA	False	NA	NA	NA	21336240	21384063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908
tx.14464	chr9	-	1677	9	FSM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	-4	0	-4	0	multi-exon	FALSE	canonical	3	105	junction_8	44.5222907654132	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5892	False	NA	NA	False	NA	NA	NA	21996727	21983541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996644
tx.14465	chr9	-	1098	5	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	49	43050	49	-7102	5prime_fragment	FALSE	canonical	3	472	junction_1	29.3545141332641	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTAGTCCTCTGAAAACA	7232	False	NA	NA	False	NA	NA	NA	22300435	22286357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
tx.14466	chr9	+	1112	2	ISM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	-19	6685	-19	-4482	5prime_fragment	FALSE	canonical	3	165	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCTAGGTTTCGTAAC	NA	False	NA	NA	False	NA	NA	NA	35179141	35180576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_35179375_35179697
tx.14467	chr9	+	3245	4	ISM	ENSMUSG00000001942.9	ENSMUST00000002007.5	3339	9	11966	-797	-9060	-603	3prime_fragment	FALSE	canonical	3	33	junction_1	0.471404520791032	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTGGCTTATTGTATT	5643	False	NA	NA	False	NA	NA	NA	37544915	37560348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_37545051_37553935_37554094_37556047_37556244_37557592
tx.14468	chr9	+	2250	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	23	1594	23	40	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGCAGAAGTTGATACAGC	NA	False	NA	NA	False	NA	NA	NA	43978340	44005330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
tx.14469	chr9	-	2082	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	18	3233	-7	434	multi-exon	FALSE	canonical	3	40	junction_7	6.83852557930183	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTTAAGTTTGATG	NA	False	NA	NA	False	NA	NA	NA	44216950	44206969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
tx.1447	chr11	+	3204	2	ISM	ENSMUSG00000020456.18	ENSMUST00000140765.8	702	3	-15	14101	-15	2156	5prime_fragment	FALSE	canonical	3	55	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTTTAATCTCCTGTA	NA	False	NA	NA	False	NA	NA	NA	6241969	6249833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_6242292_6246951
tx.14470	chr9	+	2379	9	FSM	ENSMUSG00000032114.10	ENSMUST00000213388.2	2344	9	-37	2	-33	0	multi-exon	FALSE	canonical	2	2	junction_1	9.53939201416946	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGGCTCATCCTTT	NA	False	NA	NA	False	NA	NA	NA	44308358	44314263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44308744_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
tx.14471	chr9	-	1722	6	FSM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	-16	-912	-16	912	multi-exon	FALSE	canonical	3	18	junction_5	143.058869001541	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTTTCGTTTTAT	9695	False	NA	NA	False	NA	NA	NA	45896708	45879069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896599
tx.14472	chr9	+	880	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	159	-93	46	0	multi-exon	FALSE	canonical	3	16	junction_1	1.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCGTGTTTGCAAAC	NA	False	NA	NA	False	NA	NA	NA	50664365	50667936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_50664778_50665811_50665935_50667591
tx.14473	chr9	-	1005	4	ISM	ENSMUSG00000034007.11	ENSMUST00000037408.9	5158	31	339261	366	211966	-366	3prime_fragment	FALSE	canonical	3	63	junction_3	5.24933858267454	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTATCAAGTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	55487628	55457532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490
tx.14474	chr9	+	1876	15	FSM	ENSMUSG00000032322.15	ENSMUST00000059206.8	1863	15	-19	6	-19	6	multi-exon	FALSE	canonical	1	2	junction_9	2.96922995583236	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCACATTCTTCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	55997226	56036166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035010_56035145_56035872
tx.14475	chr9	+	579	5	NIC	ENSMUSG00000032295.16	novel	545	5	NA	NA	-1	115	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	94.8376902924149	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAACTGTGCATTTTTG	NA	False	NA	NA	False	NA	NA	NA	57038050	57041554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57041416
tx.14476	chr9	-	1107	7	FSM	ENSMUSG00000040722.8	ENSMUST00000214256.2	1025	7	46	-128	-18	93	multi-exon	FALSE	canonical	3	62	junction_6	45.7262385167301	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTACGTATATGTA	NA	False	NA	NA	False	NA	NA	NA	57375297	57350800	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375098
tx.14477	chr9	+	2498	7	ISM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	43	9	-39	-9	intron_retention	FALSE	canonical	3	310	junction_5	38.7542112407012	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGGTGCTTGGAATAA	580	False	NA	NA	False	NA	NA	NA	58489617	58560152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540
tx.14479	chr9	-	3429	24	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	50	junction_17	70.6780554601603	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61854042	61824558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
tx.1448	chr11	+	790	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	380	0	-45	0	multi-exon	FALSE	canonical	3	36680	junction_4	732.852474922477	328	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	NA	False	NA	NA	NA	6365822	6369817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
tx.14480	chr9	-	3387	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	14	-3	0	3	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61854042	61824558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
tx.14481	chr9	-	4569	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTCTGTAAAATGCT	NA	False	NA	NA	False	NA	NA	NA	62888162	62785647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
tx.14482	chr9	+	1171	7	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	13	-3415	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	82.8063336278626	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTTTGTGATTTTCAC	9227	False	NA	NA	False	NA	NA	NA	63509954	63544195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668
tx.14483	chr9	+	1675	12	ISM	ENSMUSG00000032212.11	ENSMUST00000217593.2	3319	20	-74	11805	12	16	5prime_fragment	FALSE	canonical	3	132	junction_6	36.3799963198377	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAGAAAGATGAGAAGAAC	NA	False	NA	NA	False	NA	NA	NA	70450087	70487528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448
tx.14484	chr9	+	2973	2	FSM	ENSMUSG00000032212.11	ENSMUST00000215714.2	1066	2	50	-1957	-15	1957	multi-exon	FALSE	canonical	3	203	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTTTCAAAATTATCA	NA	False	NA	NA	False	NA	NA	NA	70450125	70453986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_70450364_70451251
tx.14485	chr9	-	972	2	FSM	ENSMUSG00000111348.2	ENSMUST00000216737.2	1377	2	407	-2	407	2	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTTGTCATGGGACTTA	NA	False	NA	NA	False	NA	NA	NA	75221746	75217614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_75218186_75221345
tx.14487	chr9	-	986	5	FSM	ENSMUSG00000097177.9	ENSMUST00000181448.3	602	5	17	-401	0	401	multi-exon	FALSE	canonical	3	17	junction_4	50.4746223363781	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAGAAGACAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	88740906	88738883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_88739637_88739866_88739925_88740278_88740354_88740442_88740498_88740861
tx.14488	chr9	-	1252	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.56165113888	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	106324870	106317251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323029_106324729
tx.14489	chr9	+	1605	13	ISM	ENSMUSG00000032591.16	ENSMUST00000035211.14	2262	18	1617	-3	1570	3	3prime_fragment	FALSE	canonical	3	16	junction_8	10.5944823165436	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTCTTAGTTTCTGT	8280	False	NA	NA	False	NA	NA	NA	107959251	107962205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
tx.1449	chr11	-	621	4	ISM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	4989	906	4898	3	3prime_fragment	FALSE	canonical	3	3219	junction_3	43.6882898116494	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCAGTATTTCTTC	NA	False	NA	NA	False	NA	NA	NA	6389454	6378134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375
tx.14490	chr9	+	4659	27	FSM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-146	-1	108	1	multi-exon	FALSE	canonical	3	222	junction_10	41.4654094097091	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGACTGATCCACAAC	NA	False	NA	NA	False	NA	NA	NA	108367908	108379517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
tx.14491	chr9	-	471	4	ISM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	789	326	72	-2	3prime_fragment	FALSE	canonical	3	428	junction_3	34.198765409815	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTGCTCAGTTTG	8932	False	NA	NA	False	NA	NA	NA	108443844	108443061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754
tx.14492	chr9	+	1490	13	ISM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	1502	1449	-38	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	71.2064194203491	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGATTTGGATTTTGTT	373	False	NA	NA	False	NA	NA	NA	110948704	111053287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
tx.14493	chr9	+	1555	2	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGACAGTTTTTACTC	1237	False	NA	NA	False	NA	NA	NA	111353202	111361790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr9_+_111353258_111360290
tx.14494	chr9	-	1110	6	ISM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	4342	2	4342	-2	3prime_fragment	FALSE	canonical	3	526	junction_5	49.4101204208207	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTCTCCGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	114215401	114204203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269
tx.14495	chr9	-	1968	4	ISM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	7800	1331	3087	-1331	3prime_fragment	FALSE	canonical	3	105	junction_2	7.58653778449403	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAACTAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	119758831	119755653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616
tx.14496	chrUn_JH584304v1	-	2687	6	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	309.65464634008	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59721	52668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
tx.14497	chrX	-	3275	9	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	-11	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	366.28779668452	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAATGTCATTCTGCTC	NA	False	NA	NA	False	NA	NA	NA	23227934	23085535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732
tx.14498	chrX	-	3856	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	-14	-616	3	-135	multi-exon	TRUE	canonical	3	25	junction_4	10.7695042700313	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGATTCTTCAGTCTCA	NA	False	NA	NA	False	NA	NA	NA	48377133	48098718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
tx.14499	chrX	-	1632	7	FSM	ENSMUSG00000036109.18	ENSMUST00000114875.8	4649	7	-86	3103	72	80	multi-exon	FALSE	canonical	0	0	junction_6	9.88966913276453	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATGTGACTGAAAAATG	NA	False	NA	NA	False	NA	NA	NA	50294795	50209248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50294650
tx.145	chr1	-	3020	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	-11	1573	-11	-1573	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAATATTGCCTTCTGA	6689	False	NA	NA	False	NA	NA	NA	54478141	54436735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
tx.1450	chr11	-	576	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	-54	-3	37	3	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCAGTATTTCTTC	NA	False	NA	NA	False	NA	NA	NA	6394406	6378134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
tx.14500	chrX	+	971	2	Genic_Genomic	ENSMUSG00000051851.6	novel	401	1	NA	NA	-128	703	multi-exon	FALSE	canonical	3	9	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTCTTACTTAGTATAG	NA	False	NA	NA	False	NA	NA	NA	52609870	52611102	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_+_52610392_52610652
tx.14501	chrX	+	4165	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_14	180.447880286802	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	NA	False	NA	NA	NA	67722354	67761569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
tx.14502	chrX	-	3395	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	197	8	-3	-8	multi-exon	FALSE	canonical	3	43	junction_4	6.51683479938452	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTATGTCCTGATGTG	NA	False	NA	NA	False	NA	NA	NA	70536258	70463673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
tx.14504	chrX	+	790	5	ISM	ENSMUSG00000067768.13	ENSMUST00000081827.4	1077	9	3288	-3	370	0	3prime_fragment	FALSE	canonical	3	151	junction_4	67.6659995862028	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	72261325	72266059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
tx.14505	chrX	+	1810	10	FSM	ENSMUSG00000009995.18	ENSMUST00000114180.11	1786	10	-23	-1	-11	1	multi-exon	FALSE	canonical	3	23	junction_6	91.4165611600053	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	73326344	73333755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332053_73332120_73332267_73332321_73332710_73332789_73332904
tx.14506	chrX	+	1551	2	Genic_Genomic	ENSMUSG00000081205.5	novel	1068	1	NA	NA	-55	757	multi-exon	FALSE	canonical	2	69	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAGTAATAATGGTCAA	NA	False	NA	NA	False	NA	NA	NA	79500292	79502172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_+_79500994_79501322
tx.14507	chrX	+	1634	3	Genic_Genomic	ENSMUSG00000094861.2	novel	1035	1	NA	NA	-947	475	multi-exon	FALSE	canonical	2	3	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTCTCTGTCATTTC	NA	False	NA	NA	False	NA	NA	NA	90435158	90437615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_+_90435200_90435916_90435973_90436078
tx.14508	chrX	+	1338	10	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	48	4697	-7	-4697	5prime_fragment	FALSE	canonical	3	1025	junction_6	94.1469825378788	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGGCCCTGCTGCAGG	NA	False	NA	NA	False	NA	NA	NA	95139695	95207461	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355
tx.14509	chrX	-	490	2	ISM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	5544	-9	2425	-2	3prime_fragment	FALSE	canonical	3	1497	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAAACCTGTCCTGTTC	NA	False	NA	NA	False	NA	NA	NA	100123414	100122817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_100123199_100123305
tx.1451	chr11	-	681	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	43	909	43	0	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	767	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTGTCTCAGTATTTC	NA	False	NA	NA	False	NA	NA	NA	6394400	6378137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
tx.14510	chrX	-	1856	7	FSM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	0	3	0	0	multi-exon	FALSE	canonical	3	84	junction_4	20.0637871688163	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCAGCCTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	100463415	100458538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
tx.14511	chrX	-	1863	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	-39	-3739	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	36.636635428974	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTTGTATTTGATCAT	NA	False	NA	NA	False	NA	NA	NA	103714709	103584313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_103584775_103588433_103588511_103592686_103592741_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
tx.14512	chrX	+	3565	22	FSM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	-10	-470	-10	467	multi-exon	FALSE	canonical	3	75	junction_1	51.4515821537341	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATTAATAATTTAATATT	NA	False	NA	NA	False	NA	NA	NA	133208893	133263855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
tx.14514	chrX	+	1872	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_1	20.2546016719384	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	NA	False	NA	NA	NA	149371202	149426874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_149371268_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
tx.14515	chrX	+	1606	2	NNC	ENSMUSG00000041229.16	novel	2556	12	NA	NA	-7	-27422	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAATTATTTAAT	NA	False	NA	NA	False	NA	NA	NA	150303660	150306565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_150304085_150305383
tx.14516	chrX	-	2053	7	NIC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	26	1	intron_retention	FALSE	canonical	3	44	junction_2	53.7339123211155	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGAGTCTTTTGTCCG	NA	False	NA	NA	False	NA	NA	NA	151124771	151119846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_151120562_151121720_151122392_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
tx.14517	chrX	+	3725	12	NIC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-24	-14	intron_retention	TRUE	canonical	3	25	junction_1	179.30540915451	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	158309659	158376063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
tx.14518	chrY	+	599	3	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	53	junction_1	6	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	60513147	60519912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrY_+_60513385_60518877_60519027_60519699
tx.14519	chrY	+	362	2	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	2985	5937	at_least_one_novel_splicesite	FALSE	canonical	3	404	junction_1	0	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	156	False	NA	NA	False	NA	NA	NA	90804704	90833671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrY_+_90804950_90833554
tx.1452	chr11	-	594	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	17	0	1	0	multi-exon	FALSE	canonical	3	436	junction_3	5.24933858267454	265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	6478762	6475590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
tx.14520	chr1	+	1493	15	ISM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	36	11755	-13	11	5prime_fragment	FALSE	canonical	3	97	junction_4	18.9797152728047	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTATTTAGTGAAACAT	9850	False	NA	NA	False	NA	NA	NA	9918532	9959313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094
tx.14521	chr1	+	3472	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	6	-750	6	-167	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCGACATCTAATTTCTA	9945	False	NA	NA	False	NA	NA	NA	9918627	9970828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
tx.14522	chr1	+	1457	9	NNC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-3	9	intron_retention	TRUE	canonical	3	7	junction_8	8.66656650583148	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTGTGAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	9978859	9992759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_9978916_9981899_9982038_9982134_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9992548
tx.14523	chr1	+	3406	7	FSM	ENSMUSG00000056763.17	ENSMUST00000118263.8	2162	7	-5	-1239	1	882	multi-exon	FALSE	canonical	2	28	junction_1	36.6397628570686	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTTGCTTCTCACTT	NA	False	NA	NA	False	NA	NA	NA	10109992	10139440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
tx.14524	chr1	+	4348	30	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	28	junction_1	29.4810041825238	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTCGGTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	10109992	10206994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
tx.14525	chr1	+	2344	18	NIC	ENSMUSG00000056763.17	novel	2162	7	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	28	junction_1	34.2997170285018	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTGTACTAATTTCT	NA	False	NA	NA	False	NA	NA	NA	10110004	10178778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593
tx.14526	chr1	+	1446	3	NNC	ENSMUSG00000067813.4	novel	1926	4	NA	NA	-2722	-272	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTTGTTACTTAGT	NA	False	NA	NA	False	NA	NA	NA	13736272	13771675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_13736383_13742349_13742989_13770978
tx.14527	chr1	-	3134	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	-37	810	-14	3	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGACTTTGATTCATAT	NA	False	NA	NA	False	NA	NA	NA	16589508	16414519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
tx.14528	chr1	-	1830	3	FSM	ENSMUSG00000042215.9	ENSMUST00000044691.9	1860	3	30	0	-24	0	multi-exon	FALSE	canonical	3	40	junction_1	4.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGCATTGGCCATTAT	NA	False	NA	NA	False	NA	NA	NA	33796846	33784564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_33786098_33787297_33787408_33796659
tx.14529	chr1	-	2298	7	NNC	ENSMUSG00000042197.14	novel	3578	13	NA	NA	6617	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	132.138080136735	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	33816401	33800625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349
tx.1453	chr11	+	1833	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	25	0	2	0	multi-exon	TRUE	canonical	3	315	junction_9	41.5204843093617	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	6496911	6546744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
tx.14530	chr1	-	3199	13	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	109	8095	8	7903	5prime_fragment	FALSE	canonical	3	234	junction_5	31.6503247306494	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGCTGTCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	33853499	33808720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
tx.14531	chr1	+	2697	3	Antisense	novelGene_ENSMUSG00000102279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGGTTGTGGTATT	NA	False	NA	NA	False	NA	NA	NA	36024627	36033719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr1_+_36024686_36026666_36026768_36031181
tx.14532	chr1	-	5563	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	9	3461	9	-2	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAATGTGTGCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	36283377	36182568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
tx.14533	chr1	-	814	6	ISM	ENSMUSG00000037470.15	ENSMUST00000174716.8	3064	19	-196	37585	2	-20215	5prime_fragment	FALSE	canonical	3	419	junction_4	18.7552659272003	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTATATCAAAAAGCAACG	NA	False	NA	NA	False	NA	NA	NA	36283384	36255270	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
tx.14534	chr1	-	2699	4	NIC	ENSMUSG00000079610.10	novel	2646	4	NA	NA	0	18	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	27.1947707391615	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATTGTTGGTGGTGGT	7026	False	NA	NA	False	NA	NA	NA	36586300	36576569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_36578616_36580904_36581144_36581842_36581947_36585990
tx.14535	chr1	-	2285	10	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-28	-1087	intron_retention	FALSE	canonical	3	484	junction_1	32.9256551253289	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGTGTGTGGCTCTGAT	NA	False	NA	NA	False	NA	NA	NA	36749056	36738281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
tx.14536	chr1	+	882	4	FSM	ENSMUSG00000026051.9	ENSMUST00000027217.9	902	4	13	7	13	-7	multi-exon	FALSE	canonical	2	3	junction_3	0.816496580927726	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAAGCATCAGAATTCA	NA	False	NA	NA	False	NA	NA	NA	43769774	43781731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_43770124_43776359_43776408_43777719_43777878_43781404
tx.14537	chr1	+	3114	24	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	-1	12403	0	-6	5prime_fragment	FALSE	canonical	3	286	junction_23	36.0920373584054	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGACTTGAAAGAAGA	3311	False	NA	NA	False	NA	NA	NA	43973173	44029757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670
tx.14538	chr1	+	4013	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	7	629	0	6	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGGCGTGTGGCTTAA	3311	False	NA	NA	False	NA	NA	NA	43973173	44041502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
tx.14539	chr1	+	2856	2	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACCTGCTGAATCACTC	NA	False	NA	NA	False	NA	NA	NA	45596619	45599568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_+_45597671_45597763
tx.1454	chr11	+	1657	9	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	133.856266196245	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	6496913	6546744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_6497030_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
tx.14540	chr1	-	2069	2	ISM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	510	26605	510	1491	5prime_fragment	FALSE	canonical	3	284	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTTTTAAAGTGTAC	438	False	NA	NA	False	NA	NA	NA	46892696	46873308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_46875312_46892630
tx.14541	chr1	+	1883	6	ISM	ENSMUSG00000026031.16	ENSMUST00000097722.9	1771	11	-108	20749	-65	0	5prime_fragment	FALSE	canonical	0	0	junction_1	1.54919333848297	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTGCATTTGCTTT	1195	False	NA	NA	False	NA	NA	NA	58750601	58772386	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_58750752_58752729_58752819_58765464_58765892_58768214_58768321_58770310_58770447_58771411
tx.14542	chr1	+	2021	5	FSM	ENSMUSG00000026031.16	ENSMUST00000114309.8	2010	5	-11	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_2	1.6393596310755	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTGCATTTGCTTT	3035	False	NA	NA	False	NA	NA	NA	58752441	58772386	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_58752819_58765464_58765892_58768214_58768321_58770310_58770447_58771411
tx.14543	chr1	+	2083	9	FSM	ENSMUSG00000026029.15	ENSMUST00000027189.15	2585	9	13	489	13	6	multi-exon	FALSE	canonical	2	10	junction_6	4.14578098794425	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTGTTTTGCTTT	2937	False	NA	NA	False	NA	NA	NA	58834545	58886173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_58834898_58863073_58863407_58866365_58866472_58868031_58868171_58868254_58868309_58870764_58870827_58872791_58872934_58883502_58884005_58885780
tx.14544	chr1	+	1823	9	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	4	242	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	37.3053280376946	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTGGTGTTGGGAGTA	NA	False	NA	NA	False	NA	NA	NA	64571971	64637096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64614354_64614419_64615337_64615489_64636392
tx.14545	chr1	+	1860	6	FSM	ENSMUSG00000026240.13	ENSMUST00000122884.2	2578	6	4	714	4	-62	multi-exon	FALSE	canonical	3	42	junction_3	130.042147013959	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTCAATATTTGTT	NA	False	NA	NA	False	NA	NA	NA	86514867	86533986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86526724_86526928_86528804_86528911_86532779
tx.14546	chr1	+	1311	2	ISM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	33271	-2	-11592	2	3prime_fragment	FALSE	canonical	3	11	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTGCCTTTTTGGTCT	NA	False	NA	NA	False	NA	NA	NA	87225355	87238563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_87225486_87237382
tx.14547	chr1	-	1485	3	Antisense	novelGene_ENSMUSG00000026288.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTTACCCATTGGTCA	NA	False	NA	NA	False	NA	NA	NA	87601712	87598473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr1_-_87599759_87600472_87600558_87601597
tx.14548	chr1	+	3047	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-40	-3	-20	0	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7268	False	NA	NA	False	NA	NA	NA	87683757	87720147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
tx.14549	chr1	-	3720	3	ISM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	8218	642	-23	-642	3prime_fragment	FALSE	canonical	3	369	junction_1	6	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTCGGTCTGCCCTGC	8623	False	NA	NA	False	NA	NA	NA	88197137	88190834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_88194381_88195669_88195749_88197042
tx.1455	chr11	-	2319	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	-21	-8	3	8	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCAGGCTCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	6576064	6566414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
tx.14550	chr1	+	1076	3	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	4	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTTTTTTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	88698153	88699479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_+_88698328_88698411_88698634_88698799
tx.14551	chr1	+	2310	14	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	30.9888317351218	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	90981167	91056666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91038076_91038170_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
tx.14552	chr1	-	1329	12	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	124.787157635487	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	False	NA	NA	False	NA	NA	NA	91326484	91303552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316169_91318328_91318386_91318853_91318920_91326372
tx.14553	chr1	+	1372	5	FSM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	-17	4471	-17	1	multi-exon	FALSE	canonical	3	11	junction_1	8.86002257333467	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGTTTTGGATTCT	8938	False	NA	NA	False	NA	NA	NA	91468418	91482840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_91468587_91471872_91472020_91474649_91474953_91479775_91480162_91482472
tx.14554	chr1	+	2121	2	FSM	ENSMUSG00000097814.6	ENSMUST00000181489.3	3849	2	46	1682	34	1651	multi-exon	FALSE	canonical	3	20	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTCGTATGTTATCT	NA	False	NA	NA	False	NA	NA	NA	96799991	96807277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_96800394_96805558
tx.14555	chr1	-	1387	10	ISM	ENSMUSG00000056536.15	ENSMUST00000190811.7	3015	26	-10	89822	0	1	5prime_fragment	TRUE	canonical	3	56	junction_7	9.73475382835978	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACTTTTTCAGTCAGTT	NA	False	NA	NA	False	NA	NA	NA	105591397	105574352	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
tx.14556	chr1	+	584	3	Antisense	novelGene_ENSMUSG00000099860.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCAGGTAATAGTAACAC	NA	False	NA	NA	False	NA	NA	NA	119233273	119247242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr1_+_119233438_119234108_119234328_119247041
tx.14557	chr1	-	2087	4	NIC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	36	-3	combination_of_known_splicesites	TRUE	canonical	2	24	junction_3	489.375792889949	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCGCCCTTTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	119432488	119398037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_119399556_119403624_119403803_119405644_119405854_119432306
tx.14558	chr1	+	4584	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	26	2128	26	1	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	NA	False	NA	NA	NA	127701926	127733670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
tx.14559	chr1	+	4632	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	63	2	63	-2	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	5265	False	NA	NA	False	NA	NA	NA	131755777	131776601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
tx.1456	chr11	-	908	4	FSM	ENSMUSG00000000384.16	ENSMUST00000131815.8	853	4	-42	-13	3	13	multi-exon	FALSE	canonical	3	41	junction_1	235.927013195936	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTGTGTGATTCTGCA	NA	False	NA	NA	False	NA	NA	NA	6576064	6573186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_6573462_6573815_6574284_6575148_6575214_6575964
tx.14560	chr1	+	3453	14	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	93.6120029728652	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	132405104	132433397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424595_132424767_132425667_132425746_132431501
tx.14561	chr1	+	827	3	NNC	ENSMUSG00000116158.2	novel	496	2	NA	NA	-1055	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTATTTTTCCCCT	7799	False	NA	NA	False	NA	NA	NA	133253894	133257463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_133254146_133254872_133255079_133257093
tx.14562	chr1	-	1374	9	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	258.248305899574	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289682	134273834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_134274032_134275771_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
tx.14563	chr1	-	1404	3	FSM	ENSMUSG00000041889.8	ENSMUST00000159918.2	1404	3	6	-6	6	3	multi-exon	FALSE	canonical	3	26	junction_2	3.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCCGTCCTTCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	135301182	135298791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_135299735_135299934_135300103_135300889
tx.14564	chr1	+	1902	2	FSM	ENSMUSG00000026404.13	ENSMUST00000129218.7	1364	2	24	-562	24	562	multi-exon	FALSE	canonical	3	59	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACAAATACTGAATGTT	NA	False	NA	NA	False	NA	NA	NA	136343032	136346092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_136343162_136344319
tx.14565	chr1	-	3056	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	49	5266	14	2	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACATGTACTCATATGTGA	1748	False	NA	NA	False	NA	NA	NA	156301852	156257360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
tx.14566	chr1	+	1124	7	FSM	ENSMUSG00000033488.12	ENSMUST00000119891.7	1125	7	-5	6	-2	-6	multi-exon	FALSE	canonical	1	3	junction_6	19.7624784770422	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAACTTGCTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	157286144	157316624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157316012
tx.14568	chr1	+	771	2	NIC	ENSMUSG00000097503.3	novel	1135	3	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTTCCATTCCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	169796988	169799965	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_169797145_169799350
tx.14569	chr1	-	1214	6	ISM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	23809	0	-7424	0	3prime_fragment	FALSE	canonical	3	181	junction_3	51.7323883075197	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	NA	False	NA	NA	NA	169978706	169969570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511
tx.1457	chr11	+	1154	2	ISM	ENSMUSG00000041046.8	ENSMUST00000139540.2	1333	4	16173	-6	16173	3	3prime_fragment	FALSE	canonical	3	12	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTTCTCATTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	6624737	6627478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_6624896_6626482
tx.14570	chr1	+	1030	6	FSM	ENSMUSG00000026649.15	ENSMUST00000151340.8	793	6	-66	-171	5	8	multi-exon	FALSE	canonical	0	0	junction_1	4.40908153700972	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGACCTGGGTTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	170941491	170954519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_170941666_170950614_170950763_170952602_170952666_170952838_170952920_170953602_170953780_170954132
tx.14574	chr1	-	1458	2	FSM	ENSMUSG00000103156.2	ENSMUST00000193209.2	600	2	75	-933	75	933	multi-exon	FALSE	canonical	1	1	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGTTATAGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	180596146	180590128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_180591486_180596045
tx.14575	chr1	-	3702	21	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	13	8832	13	12	5prime_fragment	FALSE	canonical	3	480	junction_16	74.1277781941426	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAACCAAAGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	180971756	180923534	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
tx.14576	chr1	+	1194	5	ISM	ENSMUSG00000038576.16	ENSMUST00000153348.8	1898	9	174	36398	174	4794	5prime_fragment	FALSE	canonical	3	24	junction_2	4.15331193145904	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTCAGAAATTAATTTT	NA	False	NA	NA	False	NA	NA	NA	182591750	182686399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_182591962_182592570_182592754_182660627_182660841_182681521_182681696_182685986
tx.14577	chr1	+	1427	2	ISM	ENSMUSG00000038576.16	ENSMUST00000085724.5	2983	8	127331	6	127331	-6	3prime_fragment	FALSE	canonical	3	28	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACGACAGTTTGAAGT	NA	False	NA	NA	False	NA	NA	NA	182719790	182724150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_182719831_182722763
tx.14578	chr1	+	2263	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	-3	-3	0	3	multi-exon	FALSE	canonical	3	16	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTGAAATCATTTGATT	958	False	NA	NA	False	NA	NA	NA	192855884	192858611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_192856089_192856552
tx.14579	chr10	+	3970	2	ISM	ENSMUSG00000038587.11	ENSMUST00000215696.2	5931	3	7196	-1	7196	1	3prime_fragment	FALSE	canonical	3	1663	junction_1	0	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	4304963	4309471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_4307940_4308477
tx.1458	chr11	-	2346	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	49	2245	-14	-26	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTCTTTAATCGTTAAT	NA	False	NA	NA	False	NA	NA	NA	8961142	8945381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
tx.14580	chr10	-	3173	2	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	175	-367	intron_retention	FALSE	canonical	3	770	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAACTTTAATTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	5755425	5749526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_5752533_5755258
tx.14581	chr10	-	1911	3	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	117	147967	-11	-2271	5prime_fragment	FALSE	canonical	3	116	junction_2	6.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTCTTCCAGTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	13744584	13676161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_13677694_13704986_13705143_13744361
tx.14582	chr10	+	1489	8	Fusion	ENSMUSG00000078452.11_ENSMUSG00000053219.16	novel	1579	9	NA	NA	-14	0	multi-exon	FALSE	canonical	3	10	junction_1	17.7350109175297	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	22034453	22250038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr10_+_22034618_22049079_22049150_22049774_22049866_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
tx.14583	chr10	+	1413	7	NIC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	36.5957647822805	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	22034465	22059816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_22034618_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
tx.14584	chr10	+	4117	18	FSM	ENSMUSG00000019978.17	ENSMUST00000218903.2	4115	18	0	-2	0	0	multi-exon	FALSE	canonical	3	273	junction_1	40.1674694938122	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	25235753	25399413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
tx.14587	chr10	-	841	7	NIC	ENSMUSG00000039480.15	novel	761	7	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	39.4883949196892	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCTTCGTAATACC	NA	False	NA	NA	False	NA	NA	NA	34294559	34273062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_34273238_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
tx.14588	chr10	+	1924	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	81	0	55	0	multi-exon	TRUE	canonical	3	1084	junction_4	88.4199902429095	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTGTCTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	36850620	36877885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
tx.1459	chr11	-	1161	8	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	4	731	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_5	46.4880937137979	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	8961187	8946608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496_8960625_8961058
tx.14591	chr10	-	1008	2	Antisense	novelGene_ENSMUSG00000038280.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTCAGCTCATTTTCTG	NA	False	NA	NA	False	NA	NA	NA	42516005	42512495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_-_42513406_42515907
tx.14592	chr10	+	3664	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	246	2122	-64	0	multi-exon	TRUE	canonical	3	208	junction_15	23.0789947788026	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTTGTTATTGTTC	NA	False	NA	NA	False	NA	NA	NA	42637737	42706388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
tx.14593	chr10	+	959	8	ISM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	-5	8474	-5	-8474	5prime_fragment	TRUE	canonical	3	170	junction_2	12.1117247967009	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAATTTAAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	52109709	52188998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909
tx.14594	chr10	+	1714	8	FSM	ENSMUSG00000019872.14	ENSMUST00000020022.8	1961	8	238	9	44	-9	multi-exon	FALSE	canonical	1	1	junction_1	1.57790871674104	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGAGTTCTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	57670707	57687917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_57670881_57677006_57677221_57678515_57678661_57681662_57681760_57683450_57683621_57683972_57684154_57685141_57685267_57687308
tx.14595	chr10	+	836	4	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	-2	-1560	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	29.5108266385218	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	941	False	NA	NA	False	NA	NA	NA	58333767	58336634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_58333885_58334990_58335036_58335183_58335242_58336018
tx.14596	chr10	+	2630	15	FSM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	70	1343	2	5	multi-exon	FALSE	canonical	3	22	junction_8	56.7996838163088	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTGGTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	59159187	59207783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
tx.14597	chr10	+	1977	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	-36	297	15	210	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTCCAGGCTTATG	NA	False	NA	NA	False	NA	NA	NA	59715411	59734046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
tx.14598	chr10	+	1194	2	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTGGGCTGCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61751919	61759353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_61752029_61758268
tx.14599	chr10	-	656	2	FSM	ENSMUSG00000097134.3	ENSMUST00000219021.2	388	2	-52	-216	-52	216	multi-exon	FALSE	canonical	3	19	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATCTTTAAAAATGCAT	NA	False	NA	NA	False	NA	NA	NA	66753570	66751198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_66751739_66753454
tx.1460	chr11	+	1219	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	34	-1	-7	1	multi-exon	FALSE	canonical	3	2502	junction_1	159.654656602932	2407	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTCTGCGGTA	NA	False	NA	NA	False	NA	NA	NA	9068540	9086168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
tx.14600	chr10	+	1752	6	ISM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-174	35747	-29	-35747	5prime_fragment	FALSE	canonical	3	63	junction_2	12.9676520619579	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTAGCCTGCATGTTTC	NA	False	NA	NA	False	NA	NA	NA	67815370	67842381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329
tx.14601	chr10	-	1319	3	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	37	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTCTTGTGGGTGATT	NA	False	NA	NA	False	NA	NA	NA	74555803	74550608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_-_74551462_74553522_74553756_74555570
tx.14602	chr10	-	862	2	Antisense	novelGene_ENSMUSG00000000903.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTCCTGTCTCCAAGA	3205	False	NA	NA	False	NA	NA	NA	75786738	75784768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_-_75785445_75786552
tx.14603	chr10	+	719	2	NNC	ENSMUSG00000020229.5	novel	2055	15	NA	NA	40168	193	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTGACTTCATGTAAG	NA	False	NA	NA	False	NA	NA	NA	76023452	76025292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_76023772_76024892
tx.14604	chr10	-	2017	11	FSM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	0	-1	0	1	multi-exon	FALSE	canonical	2	10	junction_3	2.63818119165458	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTGTTCTGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	76073671	76043059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072656_76073583
tx.14605	chr10	+	2282	12	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	30570	0	-4791	0	3prime_fragment	FALSE	canonical	3	231	junction_9	29.9407127669288	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	NA	False	NA	NA	NA	76335330	76351691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
tx.14606	chr10	+	1883	3	FSM	ENSMUSG00000009291.14	ENSMUST00000167006.2	831	3	550	-1602	550	0	multi-exon	FALSE	canonical	3	637	junction_1	17.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	77428720	77434566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_77428852_77429697_77429745_77432861
tx.14607	chr10	-	1478	5	NIC	ENSMUSG00000052151.13	novel	1566	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	25.791229129299	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	79369611	79362268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79369457
tx.14608	chr10	-	2171	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	14	junction_1	63.0349880798134	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	NA	False	NA	NA	NA	79390950	79376079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_79377034_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
tx.14609	chr10	+	1184	4	FSM	ENSMUSG00000020310.10	ENSMUST00000217748.2	944	4	-208	-32	-180	0	multi-exon	FALSE	canonical	1	3	junction_3	3.29983164553722	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGGCATATTCTTTCG	2975	False	NA	NA	False	NA	NA	NA	79500212	79504371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_79500502_79500745_79501013_79501264_79501592_79504070
tx.1461	chr11	+	1152	8	ISM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	816	-3	536	0	3prime_fragment	FALSE	canonical	3	2674	junction_7	130.54063406793	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	NA	False	NA	NA	NA	9069322	9086170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
tx.14610	chr10	-	1483	9	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	338.39360864975	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCATGGCTTGGCGTCT	NA	False	NA	NA	False	NA	NA	NA	79602779	79594374	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602709
tx.14611	chr10	+	2069	15	FSM	ENSMUSG00000035486.15	ENSMUST00000105351.2	2100	15	27	4	27	-4	multi-exon	FALSE	canonical	1	5	junction_11	2.25876975726313	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	80192319	80201319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_80192502_80193817_80193926_80194075_80194193_80194620_80194751_80195075_80195164_80195243_80195340_80195988_80196188_80196273_80196401_80196519_80196597_80196955_80197029_80197237_80197316_80198842_80199000_80199849_80199980_80200056_80200168_80200923
tx.14612	chr10	-	467	4	NIC	ENSMUSG00000035215.10	novel	468	4	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	3	184	junction_3	2016.46428736594	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTTCCTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	80691045	80688664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_80688935_80689591_80689664_80690451_80690546_80691014
tx.14613	chr10	-	487	4	FSM	ENSMUSG00000048240.15	ENSMUST00000092285.10	3362	4	25	2850	13	238	multi-exon	FALSE	canonical	2	3	junction_3	3.68178700572909	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGACCTAGCTGGAG	4469	False	NA	NA	False	NA	NA	NA	80850734	80787307	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_80787581_80788664_80788781_80833825_80833879_80850689
tx.14614	chr10	+	2006	11	NIC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	59.7863696840676	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1331	False	NA	NA	False	NA	NA	NA	81104016	81109070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_81104154_81104691_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
tx.14615	chr10	-	3014	21	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-22	7	combination_of_known_junctions	TRUE	canonical	0	0	junction_20	33.8096140173176	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGACTGAGGACTCTTT	7818	False	NA	NA	False	NA	NA	NA	81121637	81109033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
tx.14618	chr10	+	2508	5	NNC	ENSMUSG00000061371.8	novel	2360	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	16.2018517460196	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	81883949	81900579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350_81897000_81900022
tx.14619	chr10	+	2997	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	-13	518	-13	-43	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCAGTCTGAGCGTTT	NA	False	NA	NA	False	NA	NA	NA	82465679	82486115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
tx.1462	chr11	-	2759	2	FSM	ENSMUSG00000035455.13	ENSMUST00000171080.8	2844	2	0	85	0	-85	multi-exon	FALSE	canonical	3	48	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGAGTTGCTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	11758962	11750372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_11753064_11758894
tx.14620	chr10	+	971	3	NNC	ENSMUSG00000056821.14	novel	1056	3	NA	NA	-85	54	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	23	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTGATAGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	82647871	82660130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_82647970_82654864_82654958_82659350
tx.14624	chr10	+	3277	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-369	1	-329	-1	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATCTGTGTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	84753150	84852310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
tx.14627	chr10	-	3275	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	13	3460	0	176	multi-exon	FALSE	canonical	3	18	junction_8	13.3450365304858	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAATTAGGTTTTAATGA	NA	False	NA	NA	False	NA	NA	NA	89279816	89248144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
tx.1463	chr11	-	2862	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	13	86	2	-86	multi-exon	FALSE	canonical	3	411	junction_2	109.5	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGAGTTGCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	11758946	11750373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_11753064_11756095_11756216_11758894
tx.14630	chr10	+	1399	7	ISM	ENSMUSG00000020024.8	ENSMUST00000218076.2	1692	10	10468	-143	10468	143	3prime_fragment	FALSE	canonical	0	0	junction_4	86.9701417473581	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTGTGTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	94586413	94626198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
tx.14631	chr10	-	1126	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	13	522	13	-3	multi-exon	FALSE	canonical	3	29	junction_2	28.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGCCTCTTTCAATGA	NA	False	NA	NA	False	NA	NA	NA	95159957	95011129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_95011841_95158447_95158752_95159846
tx.14632	chr10	-	3378	2	NIC	ENSMUSG00000020027.19	novel	2222	3	NA	NA	36	402	intron_retention	FALSE	canonical	3	447	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAACGAAAAAAGAACC	NA	False	NA	NA	False	NA	NA	NA	95252683	95247879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_95251054_95252479
tx.14633	chr10	+	1709	7	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_6	29.3338068143605	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCTTCAAATGATTGG	NA	False	NA	NA	False	NA	NA	NA	120359239	120374524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120373440
tx.14634	chr10	+	1571	11	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_5	36.8544434227408	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCTTCAAATGATTGG	NA	False	NA	NA	False	NA	NA	NA	120359243	120374524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364492_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690_120373794_120374077
tx.14635	chr10	+	2239	10	FSM	ENSMUSG00000020218.12	ENSMUST00000020439.11	2294	10	45	10	-19	3	multi-exon	FALSE	canonical	3	14	junction_1	5.2704627669473	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTACTGTATGGGTCT	NA	False	NA	NA	False	NA	NA	NA	120869909	120936545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_120870396_120870870_120871011_120911150_120911260_120918030_120918172_120919792_120919889_120920813_120920910_120926015_120926112_120931903_120932000_120932545_120932642_120935662
tx.14636	chr10	-	1285	3	Antisense	novelGene_ENSMUSG00000047642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATTTGGTTATGACTG	4723	False	NA	NA	False	NA	NA	NA	121493422	121489806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_-_121490799_121492206_121492422_121493344
tx.14637	chr10	+	1720	6	FSM	ENSMUSG00000006731.11	ENSMUST00000219523.2	1497	6	-225	2	-72	-1	multi-exon	FALSE	canonical	3	48	junction_1	9.6	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCAATTTTTTTGTTT	282	False	NA	NA	False	NA	NA	NA	127001021	127004390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569
tx.14638	chr10	+	2417	12	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	502	-304	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	40.5731662331376	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCACACGAATACATGTC	NA	False	NA	NA	False	NA	NA	NA	127932750	127954890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823
tx.14639	chr10	+	1434	8	ISM	ENSMUSG00000044005.14	ENSMUST00000135441.2	1529	11	971	3	971	0	3prime_fragment	FALSE	canonical	3	100	junction_3	6.16110247224224	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTTTATTTTATAT	309	False	NA	NA	False	NA	NA	NA	128040603	128045808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
tx.1464	chr11	-	2985	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	2	-86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	293.968630223627	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGAGTTGCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	11758930	11750373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_11753064_11756095_11756216_11758021_11758161_11758894
tx.14640	chr10	+	1008	4	FSM	ENSMUSG00000025389.8	ENSMUST00000026455.8	2144	4	-1	1137	-1	-1137	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTGGTTAGTGCAAACTT	363	False	NA	NA	False	NA	NA	NA	128061705	128066544	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_128062111_128062916_128063082_128063501_128063583_128066187
tx.14641	chr10	-	625	3	Antisense	novelGene_ENSMUSG00000039994.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	8.5	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACATCCGGCTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	128068166	128064989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_-_128065342_128066773_128066877_128067996
tx.14642	chr10	+	1652	8	ISM	ENSMUSG00000025359.11	ENSMUST00000054125.9	2130	11	8968	114	8968	-114	3prime_fragment	FALSE	canonical	3	56	junction_3	11.004637241469	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGGGCTTTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	128551094	128555993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
tx.14643	chr11	+	2171	6	FSM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	402	0	-5	0	multi-exon	FALSE	canonical	2	3	junction_1	4.60434577328853	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGTGGTGATGAGG	NA	False	NA	NA	False	NA	NA	NA	3280802	3292971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_3281005_3281914_3282032_3282108_3282229_3283208_3283413_3283504_3283584_3291522
tx.14644	chr11	+	672	4	NIC	ENSMUSG00000075702.11	novel	707	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	68.794379615392	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	3464866	3467351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_3465074_3466260_3466297_3466841_3466921_3467001
tx.14645	chr11	+	1932	5	ISM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	35947	-2	5079	2	3prime_fragment	FALSE	canonical	3	438	junction_1	29.5338788512447	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	NA	False	NA	NA	NA	3635440	3640372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
tx.14646	chr11	-	3410	17	NIC	ENSMUSG00000009073.17	novel	1795	16	NA	NA	70	923	combination_of_known_junctions	TRUE	canonical	3	6	junction_1	88.7967306549064	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGGCTGTATTTAATT	8915	False	NA	NA	False	NA	NA	NA	4799466	4728890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_4730035_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
tx.14647	chr11	-	1941	15	FSM	ENSMUSG00000034164.18	ENSMUST00000062821.13	1947	15	6	0	6	0	multi-exon	TRUE	canonical	3	8	junction_2	4.11815294439988	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCTTGGTCTCTATGTG	7868	False	NA	NA	False	NA	NA	NA	5102251	5056264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_5056970_5060689_5060775_5066879_5066925_5078869_5078915_5079008_5079072_5079427_5079481_5079621_5079721_5080631_5080779_5081481_5081572_5081919_5082041_5084348_5084411_5085353_5085432_5093826_5093931_5094294_5094409_5102121
tx.14648	chr11	+	1229	3	FSM	ENSMUSG00000041046.8	ENSMUST00000045374.8	1233	3	4	0	4	0	multi-exon	FALSE	canonical	2	5	junction_1	3.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTATTTCTCATTTTAT	NA	False	NA	NA	False	NA	NA	NA	6608524	6627475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_6608628_6624762_6624896_6626482
tx.14649	chr11	-	1841	9	NNC	ENSMUSG00000069910.3	novel	2505	12	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.6974869470066	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATTTTTTAATTCT	NA	False	NA	NA	False	NA	NA	NA	34724457	34700013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_34700670_34704152_34704285_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
tx.1465	chr11	-	1561	11	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	7374	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	32.5590233268751	8	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	NA	False	NA	NA	False	NA	NA	NA	11823255	11764100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133
tx.14650	chr11	+	2469	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	328	4579	328	-4579	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGAGACCCCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35660638	35677533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
tx.14651	chr11	+	500	2	NNC	ENSMUSG00000020346.17	novel	2976	3	NA	NA	235	1720	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGATCATGATTTCTT	NA	False	NA	NA	False	NA	NA	NA	49136292	49138007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_49136445_49137659
tx.14652	chr11	-	568	5	ISM	ENSMUSG00000049321.18	ENSMUST00000109128.8	2782	7	-4	6931	-4	0	5prime_fragment	FALSE	canonical	3	18	junction_2	26.0516314268416	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTCTTTAATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	50806996	50796816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_50796985_50801262_50801353_50801576_50801704_50803106_50803229_50806935
tx.14653	chr11	+	2779	5	FSM	ENSMUSG00000020364.15	ENSMUST00000109122.8	4165	5	-54	1440	-17	-3	multi-exon	FALSE	canonical	1	1	junction_2	2.77263412660235	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGATAGTCCACCTAGT	NA	False	NA	NA	False	NA	NA	NA	50950066	50962186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_50950230_50950612_50950869_50951686_50951814_50952229_50952326_50960049
tx.14654	chr11	-	1966	2	Genic_Genomic	ENSMUSG00000081297.2	novel	596	1	NA	NA	-1188	1196	multi-exon	FALSE	canonical	3	4	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTTGTAGTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	52371118	52368138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr11_-_52368313_52369326
tx.14655	chr11	-	194	2	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTCTAATCTGATCT	9061	False	NA	NA	False	NA	NA	NA	53260734	53201237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_53201378_53260680
tx.14656	chr11	+	1852	12	NIC	ENSMUSG00000018906.15	novel	1997	3	NA	NA	-54	-2	combination_of_known_junctions	TRUE	canonical	1	6	junction_1	24.1373480367652	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTATTTTGGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	54003974	54022486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_54004156_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
tx.14657	chr11	+	2136	16	ISM	ENSMUSG00000037533.21	ENSMUST00000207429.2	5164	29	-59	53501	-2	3979	5prime_fragment	FALSE	canonical	3	58	junction_8	14.6827184888297	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAATAAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	54413712	54533669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536
tx.14658	chr11	-	2811	18	FSM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	23	0	5	0	multi-exon	FALSE	canonical	3	102	junction_1	53.1161161918674	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGACTGGCTAATTCT	3605	False	NA	NA	False	NA	NA	NA	54846925	54801610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
tx.1466	chr11	+	1066	3	NNC	ENSMUSG00000086391.2	novel	1075	4	NA	NA	14005	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	3	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGTAAATATTTTATTT	2724	False	NA	NA	False	NA	NA	NA	11832127	11835321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_11832389_11832956_11833080_11834639
tx.14660	chr11	+	2935	6	ISM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	502	1	-23	-1	3prime_fragment	FALSE	canonical	3	119	junction_1	8.42377587546108	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	971	False	NA	NA	False	NA	NA	NA	58222077	58238550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
tx.14661	chr11	-	958	7	FSM	ENSMUSG00000000301.17	ENSMUST00000000310.14	953	7	-8	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_6	14.4846662217517	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTCTGGTCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	59937311	59861442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937169
tx.14662	chr11	-	1333	9	NNC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	23	-404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	115.513459713576	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCAAGCCTCATTTTTA	NA	False	NA	NA	False	NA	NA	NA	60307902	60291867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576_60307723_60307811
tx.14663	chr11	-	4276	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_9	124.703302202656	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTTTGGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	61470512	61408076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61470392
tx.14664	chr11	-	3444	8	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	109.403204818185	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTTTGGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	61470512	61408076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61470392
tx.14665	chr11	+	2081	9	ISM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	244	1176	244	4	3prime_fragment	FALSE	canonical	3	145	junction_1	27.7398630133604	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGGATTCTAATAATC	NA	False	NA	NA	False	NA	NA	NA	62172553	62206076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
tx.14666	chr11	-	795	5	NIC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	2115	2	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	747.804578416046	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATGACATATTTCTTT	6451	False	NA	NA	False	NA	NA	NA	62427196	62415769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_62416114_62418317_62418433_62424710_62424781_62424871_62425049_62427107
tx.14667	chr11	+	950	4	NIC	ENSMUSG00000020895.15	novel	779	5	NA	NA	12	0	intron_retention	FALSE	canonical	3	348	junction_3	26.9814751264641	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4666	False	NA	NA	False	NA	NA	NA	68961650	68963856	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_68962118_68962199_68962301_68963248_68963346_68963571
tx.14668	chr11	+	1290	3	NIC	ENSMUSG00000018470.9	novel	750	7	NA	NA	1030	-3	intron_retention	FALSE	canonical	3	49	junction_1	1	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGACCACGTCTGAAATT	NA	False	NA	NA	False	NA	NA	NA	69222179	69223865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_69222407_69222561_69222651_69222891
tx.14669	chr11	+	428	2	ISM	ENSMUSG00000018554.14	ENSMUST00000148395.2	679	3	529	0	529	0	3prime_fragment	FALSE	canonical	3	89	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTGTCCTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	69831898	69832421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_69831957_69832051
tx.1467	chr11	-	447	4	FSM	ENSMUSG00000078974.11	ENSMUST00000166950.8	754	4	307	0	-11	0	multi-exon	FALSE	canonical	3	4864	junction_3	651.205207459386	861	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATCAAATTTTAGTAA	NA	False	NA	NA	False	NA	NA	NA	16458177	16451637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458103
tx.14670	chr11	+	741	4	NNC	ENSMUSG00000018919.11	novel	478	4	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	4.96655480858378	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAATGTGCCAGTGAT	NA	False	NA	NA	False	NA	NA	NA	70400786	70402001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_70400873_70401040_70401178_70401394_70401579_70401667
tx.14671	chr11	+	767	4	FSM	ENSMUSG00000018919.11	ENSMUST00000179986.8	478	4	14	-303	14	7	multi-exon	FALSE	canonical	2	3	junction_1	5.71547606649408	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAGTGATGAAAGATGAG	NA	False	NA	NA	False	NA	NA	NA	70400809	70402011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70400912_70401040_70401178_70401394_70401579_70401667
tx.14672	chr11	-	1355	8	ISM	ENSMUSG00000020798.15	ENSMUST00000021154.7	1804	11	11777	-10	11777	5	3prime_fragment	FALSE	canonical	1	2	junction_5	5.11101251999952	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTTCTTAGACCATCT	NA	False	NA	NA	False	NA	NA	NA	72429350	72388975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_72389301_72390180_72390353_72390463_72390563_72395881_72395948_72420359_72420550_72427353_72427507_72427996_72428146_72429149
tx.14673	chr11	-	1450	7	NNC	ENSMUSG00000020774.10	novel	1746	7	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	6.49144736471682	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGATGACTGTGATA	NA	False	NA	NA	False	NA	NA	NA	73215488	73195817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73215080_73215344_73215451
tx.14674	chr11	+	3497	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	14	6	14	-6	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCAACTCTGTATTGGT	NA	False	NA	NA	False	NA	NA	NA	75239272	75296525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
tx.14675	chr11	+	2249	11	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	13913	-2	-490	0	3prime_fragment	FALSE	canonical	3	264	junction_8	29.1719042916296	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	75560611	75564736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
tx.14676	chr11	-	1359	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	29	-6	combination_of_known_splicesites	FALSE	canonical	2	14	junction_5	68.0458668840364	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	NA	False	NA	NA	NA	77404167	77398930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403985
tx.14677	chr11	-	2650	15	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	14.9114734622815	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6257	False	NA	NA	False	NA	NA	NA	78067492	78056931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78062065_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
tx.1468	chr11	-	799	2	ISM	ENSMUSG00000087060.8	ENSMUST00000139493.8	941	4	14553	-5	14477	0	3prime_fragment	FALSE	canonical	3	10	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGTATCGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	16886565	16885153	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_16885842_16886454
tx.14680	chr11	+	2568	23	NIC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	0	-19047	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	31.0287789635194	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTACACAGCATTTC	3478	False	NA	NA	False	NA	NA	NA	85243992	85474823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_85244060_85245419_85245488_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722
tx.14681	chr11	+	1728	9	NNC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	0	-2481	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	100.903419169025	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGGTGGACCTGTTA	NA	False	NA	NA	False	NA	NA	NA	86375510	86387370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_86375626_86376886_86377117_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
tx.14682	chr11	-	2070	8	ISM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	52692	-2	-1112	2	3prime_fragment	FALSE	canonical	3	1101	junction_5	59.7583569426887	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGAATTGCAGTTTTA	6731	False	NA	NA	False	NA	NA	NA	86595635	86585478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465
tx.14683	chr11	-	442	2	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	122	37527	122	-6786	5prime_fragment	FALSE	canonical	3	155	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCGTTGCTTTGTCAG	8649	False	NA	NA	False	NA	NA	NA	86698450	86697198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_86697454_86698263
tx.14684	chr11	-	3622	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-69	271	-69	-271	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATAAAGCTGCTATTG	NA	False	NA	NA	False	NA	NA	NA	86999603	86980249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
tx.14685	chr11	-	3471	10	FSM	ENSMUSG00000007646.14	ENSMUST00000153073.8	2061	10	15	-1425	15	-521	multi-exon	FALSE	canonical	3	11	junction_2	58.9867112048589	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTGTGTATACATCT	NA	False	NA	NA	False	NA	NA	NA	87295317	87267991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_87270314_87271657_87271719_87279073_87279154_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
tx.14686	chr11	-	1595	10	NNC	ENSMUSG00000069769.14	novel	6436	14	NA	NA	-35502	57	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	5.3356476460191	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTAAATATAATTCCAT	NA	False	NA	NA	False	NA	NA	NA	88516475	88234657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_88235487_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88516415
tx.14687	chr11	+	3286	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-5	-2103	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	47.8420251975186	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCATGGGTTTCTCTAT	NA	False	NA	NA	False	NA	NA	NA	93777027	93825924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706
tx.14688	chr11	-	3355	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	93	-6	-9	6	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTTTGCTTCCTGC	2298	False	NA	NA	False	NA	NA	NA	94568248	94554670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
tx.14689	chr11	-	2236	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	-5	320	-5	2	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGTTGCAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	96668362	96658700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
tx.1469	chr11	-	1030	4	FSM	ENSMUSG00000087060.8	ENSMUST00000123734.8	787	4	-75	-168	1	0	multi-exon	FALSE	canonical	3	11	junction_1	8.25967446224258	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGTATCGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	16901117	16885153	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_16885927_16886454_16886565_16900881_16900931_16901019
tx.14690	chr11	-	3931	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	150	junction_3	570.471345078397	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACTTTCTCCCCCCTCT	NA	False	NA	NA	False	NA	NA	NA	96714840	96708243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
tx.14691	chr11	+	1395	2	FSM	ENSMUSG00000047040.10	ENSMUST00000062172.6	1242	2	-148	-5	-56	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGGTCTTATTTATACAC	NA	False	NA	NA	False	NA	NA	NA	96820071	96826474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96820336_96825343
tx.14692	chr11	+	734	6	ISM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	52	4638	52	-258	5prime_fragment	FALSE	canonical	3	499	junction_3	74.0988528926056	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTACAAGGAGCCAGCAG	4508	False	NA	NA	False	NA	NA	NA	97690442	97724952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909
tx.14693	chr11	-	2510	15	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-65	2388	combination_of_known_junctions	TRUE	canonical	3	15	junction_14	36.7548414137095	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACCATCAGGGGACCC	2309	False	NA	NA	False	NA	NA	NA	98041294	97979528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
tx.14694	chr11	+	2550	12	NIC	ENSMUSG00000017499.16	novel	4802	13	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	177.064586432734	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGGGCTGCATTTG	35	False	NA	NA	False	NA	NA	NA	98798644	98812719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802216_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
tx.14695	chr11	+	1840	6	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	5888	-8	1161	8	3prime_fragment	FALSE	canonical	3	22	junction_1	5.76194411635517	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGACAGATGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	100312410	100315658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
tx.14696	chr11	+	2156	12	FSM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	82	2	-5	-2	multi-exon	FALSE	canonical	2	3	junction_1	9.12538915733062	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTTGAGTGACACTGT	NA	False	NA	NA	False	NA	NA	NA	100436514	100462787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100436735_100440628_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
tx.14697	chr11	+	2165	3	FSM	ENSMUSG00000006782.17	ENSMUST00000150414.8	2904	3	739	0	372	0	multi-exon	FALSE	canonical	3	73	junction_1	6	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	NA	False	NA	NA	NA	100467088	100472554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100467732_100469738_100469879_100471172
tx.14698	chr11	-	2012	14	ISM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	-69	9701	30	-3447	5prime_fragment	FALSE	canonical	3	434	junction_6	54.57745161559	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCAACCAAACTGTGCTC	NA	False	NA	NA	False	NA	NA	NA	100830275	100788762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
tx.14699	chr11	-	1901	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	-13	2324	-13	2	multi-exon	FALSE	canonical	3	8	junction_1	3.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACGTTCTCATTATTTG	NA	False	NA	NA	False	NA	NA	NA	101875638	101864292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_101865766_101872442_101872670_101875437
tx.147	chr1	-	2005	10	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	27318	1854	-7622	-1850	3prime_fragment	FALSE	canonical	2	1032	junction_2	208.482583575514	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	55039322	55026181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173
tx.1470	chr11	-	941	4	FSM	ENSMUSG00000087060.8	ENSMUST00000139493.8	941	4	1	-1	1	1	multi-exon	FALSE	canonical	3	10	junction_1	8.73053390247253	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGAAGGTGTATCGTTT	NA	False	NA	NA	False	NA	NA	NA	16901117	16885157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_16885842_16886454_16886565_16900881_16900931_16901019
tx.14700	chr11	+	1073	5	FSM	ENSMUSG00000034793.16	ENSMUST00000124594.8	895	5	251	-429	35	0	multi-exon	FALSE	canonical	3	149	junction_3	4.76313972081441	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	False	NA	NA	False	NA	NA	NA	102082885	102084907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
tx.14701	chr11	+	1115	2	ISM	ENSMUSG00000034773.17	ENSMUST00000133930.8	2813	11	-22	13627	-22	-9054	5prime_fragment	FALSE	canonical	3	336	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAGAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	102139685	102142386	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_102139919_102141504
tx.14702	chr11	-	2280	4	FSM	ENSMUSG00000020925.17	ENSMUST00000124869.8	407	4	-216	-1657	-18	3	multi-exon	FALSE	non_canonical	0	0	junction_1	267.304237818175	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTCTTGTTCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	102588578	102575508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102577323_102581026_102581163_102582936_102583025_102588336
tx.14703	chr11	-	889	6	ISM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	35	29759	3	1703	5prime_fragment	FALSE	canonical	3	142	junction_4	515.263583032995	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAGACTCTGCCAGATT	8501	False	NA	NA	False	NA	NA	NA	102771758	102759057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
tx.14704	chr11	+	836	3	FSM	ENSMUSG00000020695.15	ENSMUST00000126931.2	831	3	-4	-1	-4	1	multi-exon	FALSE	canonical	0	0	junction_2	2	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGTGGCTCAGTGGATA	1493	False	NA	NA	False	NA	NA	NA	105183464	105217718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_105183728_105216327_105216730_105217547
tx.14705	chr11	+	1910	4	ISM	ENSMUSG00000020681.15	ENSMUST00000001964.8	2418	14	10340	-693	8943	-18	intron_retention	FALSE	canonical	1	2	junction_1	1.69967317119759	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCACTGTTGAAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	105876373	105880772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_105876544_105876815_105876915_105878841_105878965_105879254
tx.14706	chr11	+	2540	10	ISM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	57903	0	-8696	0	3prime_fragment	FALSE	canonical	3	32	junction_8	10.8979554091015	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGTGCCCAGGGATG	NA	False	NA	NA	False	NA	NA	NA	106033341	106046272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
tx.14707	chr11	-	914	5	FSM	ENSMUSG00000020713.7	ENSMUST00000103071.4	862	5	-49	-3	-49	3	multi-exon	FALSE	canonical	0	0	junction_4	0.866025403784439	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCGGCTAGAGGTCTTT	7008	False	NA	NA	False	NA	NA	NA	106192740	106191093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_106191393_106191590_106191753_106191920_106192038_106192221_106192383_106192565
tx.14708	chr11	+	2761	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	-57	-8	-34	0	multi-exon	FALSE	canonical	0	0	junction_10	15.3330523078346	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTTGAATTTATAACC	5062	False	NA	NA	False	NA	NA	NA	106680043	106709687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
tx.14709	chr11	-	3435	17	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	82	537	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	117.959589876152	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCCAAGCGGTGGTGG	1212	False	NA	NA	False	NA	NA	NA	107080096	107056951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107077460_107077518_107077634_107077749_107079942
tx.1471	chr11	+	2770	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	89	0	89	0	multi-exon	FALSE	canonical	3	579	junction_5	55.0962793662149	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	17109351	17150375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
tx.14710	chr11	+	939	6	NNC	ENSMUSG00000020610.18	novel	2816	9	NA	NA	-19	-890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.673924077151	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGTGTTTTCTGTAGG	NA	False	NA	NA	False	NA	NA	NA	109316752	109320981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_109316785_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749
tx.14711	chr11	-	2604	9	NIC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	164.810497238495	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7789	False	NA	NA	False	NA	NA	NA	113456562	113135679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113452831_113452951_113456501
tx.14712	chr11	+	2582	12	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	-2604	1	intron_retention	FALSE	canonical	3	226	junction_3	31.6172878748634	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	113542908	113553227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
tx.14713	chr11	-	1629	3	NNC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	853	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	83.5	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGACTGCAGACCATT	6505	False	NA	NA	False	NA	NA	NA	115507878	115505003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_115506418_115507346_115507478_115507794
tx.14714	chr11	+	3489	25	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-10	-22	combination_of_known_junctions	TRUE	canonical	3	54	junction_22	172.677761668954	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6790	False	NA	NA	False	NA	NA	NA	115714864	115746582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
tx.14715	chr11	+	3532	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-2	-22	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_23	160.438568929045	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6798	False	NA	NA	False	NA	NA	NA	115714872	115746582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
tx.14716	chr11	+	1650	2	FSM	ENSMUSG00000020793.6	ENSMUST00000055872.3	1940	2	290	0	-257	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCATTTCATATGCTGT	NA	False	NA	NA	False	NA	NA	NA	116172054	116174764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_116172677_116173736
tx.14717	chr11	+	1208	2	FSM	ENSMUSG00000050628.7	ENSMUST00000144310.2	343	2	-14	-851	-14	-3	multi-exon	FALSE	canonical	3	1535	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTTTGTGTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	116325320	116329900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_116325448_116328819
tx.14718	chr11	+	1327	4	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	37916	-12	-1915	12	intron_retention	FALSE	canonical	3	367	junction_1	5.79271573232759	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGATATTTTTCAGAG	NA	False	NA	NA	False	NA	NA	NA	117043979	117048397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_117044105_117046045_117046298_117047186_117047366_117047626
tx.14719	chr11	-	2900	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-25	3	at_least_one_novel_splicesite	TRUE	canonical	3	72	junction_9	62.8793418727409	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	NA	False	NA	NA	NA	117671509	117656810	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
tx.1472	chr11	-	1539	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	5	0	5	0	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	372	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTCTCTTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	17161563	17153197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
tx.14720	chr11	+	2516	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	-189	0	-189	0	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	117716560	117730734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
tx.14721	chr11	+	2205	9	ISM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	6369	0	20	0	3prime_fragment	FALSE	canonical	3	36	junction_7	7.01338006955277	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	117723118	117730734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
tx.14722	chr11	+	2662	17	FSM	ENSMUSG00000039908.15	ENSMUST00000050880.8	2695	17	11	22	11	8	multi-exon	FALSE	canonical	3	19	junction_1	16.3122605346408	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATATTCTGTGGGTCCA	NA	False	NA	NA	False	NA	NA	NA	119246393	119271883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
tx.14723	chr11	+	3885	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	54.3336283547972	2	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	NA	False	NA	NA	NA	121342790	121507990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469620_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
tx.14724	chr12	+	2378	8	NIC	ENSMUSG00000079179.10	novel	823	8	NA	NA	-11	885	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	72.4704021216487	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGTTTTTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	3285514	3301262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063_3288113_3288833_3289010_3291521_3291579_3297351_3297439_3299866
tx.14725	chr12	+	2296	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	NA	False	NA	NA	NA	3622485	3831398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
tx.14726	chr12	+	2303	20	FSM	ENSMUSG00000071454.14	ENSMUST00000164607.9	2390	20	84	3	-6	0	multi-exon	FALSE	canonical	0	0	junction_4	90.3998198218487	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGTGTGTGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	3622516	3831395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
tx.14727	chr12	-	3298	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-41	2011	-6	639	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTTGAAATGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	11315808	11290931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
tx.14728	chr12	+	2504	3	Genic_Genomic	ENSMUSG00000113402.2	novel	324	1	NA	NA	-282	18678	multi-exon	FALSE	canonical	1	1	junction_1	20.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	18437473	18456757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr12_+_18437882_18453327_18453389_18454722
tx.14729	chr12	-	1608	4	NNC	ENSMUSG00000073158.5	novel	2245	4	NA	NA	10429	-326	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.8602979164381	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATAGATGTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	24136818	24093528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_24094850_24124359_24124421_24124622_24124750_24136719
tx.1473	chr11	+	2031	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	-23	-6	-23	6	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGCGTTGATTCTTT	2448	False	NA	NA	False	NA	NA	NA	17161894	17183802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
tx.14730	chr12	+	3675	8	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2959	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	82.5170359652466	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	30631465	30641218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30634226_30634295_30635468_30635590_30637198_30637254_30638472_30638567_30638650
tx.14731	chr12	+	2521	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	-66	1	-50	-1	multi-exon	TRUE	canonical	0	0	junction_1	2.34608870919344	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTATTTATTAACACTA	NA	False	NA	NA	False	NA	NA	NA	51640073	51652543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
tx.14733	chr12	+	1026	4	NNC	ENSMUSG00000095595.3	novel	3922	5	NA	NA	9117	-2517	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	46.2913478836908	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAAGCACTGTGGATTT	NA	False	NA	NA	False	NA	NA	NA	55180370	55186372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_55180420_55182452_55182520_55183902_55184001_55185560
tx.14734	chr12	+	1704	11	NIC	ENSMUSG00000012076.9	novel	2609	10	NA	NA	20	-8	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	58.9460770535241	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTCATTTGTAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	55883128	55916513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946_55915306_55916182
tx.14735	chr12	+	4009	3	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	105	2286	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	3.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTATGTTTTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	57277302	57288954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_57277398_57281366_57281475_57285148
tx.14736	chr12	+	625	7	ISM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	63	3786	4	1037	5prime_fragment	FALSE	canonical	3	479	junction_6	28.2159332450459	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGGCGAGAACTGTTTG	NA	False	NA	NA	False	NA	NA	NA	59113732	59116998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927
tx.14737	chr12	+	1687	7	FSM	ENSMUSG00000055884.9	ENSMUST00000223051.2	1682	7	-3	-2	-3	2	multi-exon	FALSE	canonical	3	55	junction_4	45.9737243796207	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTAGTAGTTACTGGT	9277	False	NA	NA	False	NA	NA	NA	65122373	65140860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426
tx.14738	chr12	-	2786	20	FSM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	33	6	33	2	multi-exon	FALSE	canonical	2	8	junction_17	3.93154724147013	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATAGCCTGCTTGGATTC	6233	False	NA	NA	False	NA	NA	NA	70274424	70237590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
tx.14739	chr12	-	1100	5	ISM	ENSMUSG00000021056.9	ENSMUST00000218426.2	1980	9	29706	-1	12424	1	3prime_fragment	FALSE	canonical	2	7	junction_2	10.0623058987491	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGATGGTTTGAACTAC	1070	False	NA	NA	False	NA	NA	NA	76263814	76250758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_76251085_76253561_76253769_76259148_76259332_76261186_76261493_76263736
tx.1474	chr11	+	1061	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-22	1942	-7	610	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	445	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTTGTATGTCCTGACT	7309	False	NA	NA	False	NA	NA	NA	17207571	17217234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
tx.14740	chr12	+	2966	12	FSM	ENSMUSG00000021065.17	ENSMUST00000171770.10	2765	12	-94	-107	-71	0	multi-exon	FALSE	canonical	3	35	junction_1	20.7412233753807	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	77284827	77522763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
tx.14741	chr12	+	997	7	NNC	ENSMUSG00000059060.16	novel	2187	11	NA	NA	18	-181250	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.3156328315757	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCCCTTTTCCTTCTT	8731	False	NA	NA	False	NA	NA	NA	79344142	79374180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_79344360_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994
tx.14742	chr12	+	485	4	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATTGTATATTGGAAGC	NA	False	NA	NA	False	NA	NA	NA	80345445	80353289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_+_80345504_80345858_80345916_80345997_80346110_80353031
tx.14743	chr12	+	2961	3	ISM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	133	15226	8	-1472	5prime_fragment	FALSE	canonical	3	212	junction_2	10.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTCACTTAGGTTTCT	2796	False	NA	NA	False	NA	NA	NA	80510001	80529670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_80510055_80522496_80522963_80527228
tx.14744	chr12	+	3187	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7380	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	44.458470009162	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGGTGCCTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	81066201	81233185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_81066280_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
tx.14745	chr12	-	3135	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9320	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.7081346910826	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGGCCATCGTATGGAT	NA	False	NA	NA	False	NA	NA	NA	83653316	83593623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83651973_83652098_83653189
tx.14746	chr12	-	3552	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-7	15	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	26.5375206076227	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGTTCTTATTTGCAAA	NA	False	NA	NA	False	NA	NA	NA	83968671	83840829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
tx.14747	chr12	+	1590	2	FSM	ENSMUSG00000021241.8	ENSMUST00000222166.2	1588	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	86	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820048	84821862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84820146_84820369
tx.14748	chr12	-	1092	5	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	10.6389614154766	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTCCAGGTCACTG	NA	False	NA	NA	False	NA	NA	NA	86516816	86471840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr12_-_86472015_86474587_86474843_86476368_86476447_86508048_86508306_86516488
tx.14749	chr12	-	2143	5	ISM	ENSMUSG00000020964.15	ENSMUST00000167466.2	5544	21	34107	1716	-1062	306	3prime_fragment	FALSE	canonical	3	350	junction_1	43.1566912540802	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTACATTTGTGTGTG	6575	False	NA	NA	False	NA	NA	NA	91781796	91775110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747
tx.1475	chr11	-	910	2	ISM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	7821	1133	7821	-1133	3prime_fragment	FALSE	canonical	3	181	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTTGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	17896054	17889888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_17890351_17895606
tx.14750	chr12	-	3744	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-2	212	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	88.9223882705254	2	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTTTGGAAAGCTTTG	NA	False	NA	NA	False	NA	NA	NA	91815916	91775204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808629_91809999_91810038_91815732
tx.14751	chr12	-	2330	11	FSM	ENSMUSG00000021186.10	ENSMUST00000021603.9	5829	11	127	3372	31	0	multi-exon	FALSE	canonical	3	12	junction_2	1.74355957741627	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTTTGGTTAATTAT	NA	False	NA	NA	False	NA	NA	NA	101785187	101716195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784992
tx.14752	chr12	+	2479	14	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-5	3624	-5	-3624	5prime_fragment	FALSE	canonical	3	176	junction_8	16.3149475878073	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGAAGCTTTATCATAA	NA	False	NA	NA	False	NA	NA	NA	101942241	101969059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886
tx.14753	chr12	+	1952	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.6430622198209	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTGGTCATGGTGTT	4850	False	NA	NA	False	NA	NA	NA	108860197	108994380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_108860252_108863834_108863933_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
tx.14754	chr12	+	2652	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.6713610367747	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTGGTCATGGTGTT	4869	False	NA	NA	False	NA	NA	NA	108860216	108994380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_108860252_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
tx.14755	chr12	+	2496	4	NNC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	66.001683480213	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	5353	False	NA	NA	False	NA	NA	NA	110704432	110761462	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_110704712_110719963_110720083_110745729_110745913_110759547
tx.14756	chr12	+	2020	3	ISM	ENSMUSG00000021271.6	ENSMUST00000170060.4	3723	8	16035	0	16008	0	3prime_fragment	FALSE	canonical	3	47	junction_1	12.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTTTCTTGATGTGT	NA	False	NA	NA	False	NA	NA	NA	110832747	110836430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_110832803_110833141_110833260_110834583
tx.14757	chr12	+	3756	11	FSM	ENSMUSG00000021282.18	ENSMUST00000050993.11	1969	11	-94	-1693	-94	28	multi-exon	FALSE	canonical	3	20	junction_1	700.620753332357	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTCATTTTACTGT	NA	False	NA	NA	False	NA	NA	NA	111505121	111513050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_111505382_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
tx.14758	chr12	+	956	4	NIC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	240.92230190573	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAAGTTGAGAATAAGCC	1562	False	NA	NA	False	NA	NA	NA	111679715	111700657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_111679853_111689045_111689244_111690773_111690838_111700100
tx.14759	chr13	+	3285	3	NIC	ENSMUSG00000097709.9	novel	442	4	NA	NA	-1	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	16	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCACATGTGACTCTTA	NA	False	NA	NA	False	NA	NA	NA	3528232	3538064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_3528391_3529908_3530002_3535030
tx.1476	chr11	+	428	2	FSM	ENSMUSG00000086468.2	ENSMUST00000148496.2	388	2	-30	-10	4	10	multi-exon	FALSE	canonical	3	24	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTATGCTGTGTTTGTGG	NA	False	NA	NA	False	NA	NA	NA	17903973	17905108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_17904086_17904792
tx.14760	chr13	-	2706	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099820.10	2736	10	39	-9	29	0	multi-exon	FALSE	canonical	0	0	junction_5	22.4152725712726	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTCTCTGGAATAGT	NA	False	NA	NA	False	NA	NA	NA	12476345	12454295	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
tx.14761	chr13	+	1831	6	ISM	ENSMUSG00000005397.9	ENSMUST00000222142.2	3803	14	-65	24854	51	-24854	5prime_fragment	FALSE	canonical	3	684	junction_5	39.004615111548	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGGAGGAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	13612186	13651195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743
tx.14762	chr13	+	1447	9	ISM	ENSMUSG00000039242.11	ENSMUST00000221974.2	2439	13	-4	4457	0	-1099	5prime_fragment	TRUE	canonical	3	178	junction_5	12.5673187275568	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGGGTTAATATGTTA	NA	False	NA	NA	False	NA	NA	NA	14129205	14169231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999
tx.14763	chr13	+	1196	11	ISM	ENSMUSG00000039219.19	ENSMUST00000110533.2	3020	15	-22	10553	-7	35	5prime_fragment	FALSE	canonical	3	58	junction_10	8.57671265695663	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGTAAATAAAAACTG	1421	False	NA	NA	False	NA	NA	NA	14238361	14329714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565
tx.14764	chr13	+	2562	7	NIC	ENSMUSG00000041112.18	novel	3748	5	NA	NA	-24	-1825	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	14.4308696896618	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGGTGTTTTGATT	NA	False	NA	NA	False	NA	NA	NA	20656871	20790698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_20657458_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
tx.14765	chr13	-	2455	5	NIC	ENSMUSG00000022228.15	novel	4366	6	NA	NA	7	-1586	intron_retention	FALSE	canonical	3	7	junction_2	5.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGCAAGAGACTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	21637893	21627935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_21630000_21631955_21632065_21633443_21633504_21633610_21633687_21637747
tx.14766	chr13	+	756	2	ISM	ENSMUSG00000035910.16	ENSMUST00000160363.2	661	4	14816	-436	14816	436	3prime_fragment	FALSE	canonical	3	14	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTTTCAGAGATAATTT	NA	False	NA	NA	False	NA	NA	NA	25386252	25389954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_25386451_25389396
tx.14767	chr13	-	2099	4	FSM	ENSMUSG00000048978.15	ENSMUST00000057866.13	2222	4	124	-1	12	1	multi-exon	FALSE	canonical	2	3	junction_1	1.69967317119759	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGGTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	25453941	25436021	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_25437735_25446182_25446383_25452004_25452074_25453824
tx.14768	chr13	-	4247	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	10	-1	10	1	multi-exon	FALSE	canonical	3	102	junction_19	19.2909994862811	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTTGTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	31158027	30997900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
tx.14769	chr13	-	894	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	129	1063	129	-1063	multi-exon	FALSE	canonical	3	325	junction_1	9.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATTTATTTCCTGACA	NA	False	NA	NA	False	NA	NA	NA	36301380	36163440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_36163891_36276788_36276910_36301057
tx.1477	chr11	-	3356	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	-2	277	-2	-277	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTTTAAAAGATCTG	1334	False	NA	NA	False	NA	NA	NA	20062915	20012580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
tx.14770	chr13	+	1815	4	ISM	ENSMUSG00000021428.10	ENSMUST00000226006.2	2307	5	-31	2452	6	79	5prime_fragment	FALSE	canonical	3	187	junction_3	20.3960780543711	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTCTCTGAATGGA	4744	False	NA	NA	False	NA	NA	NA	38221226	38229125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884
tx.14771	chr13	+	1996	5	FSM	ENSMUSG00000021367.9	ENSMUST00000021796.9	2139	5	143	0	143	0	multi-exon	FALSE	canonical	1	1	junction_4	2.44948974278318	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTGTGAATTATTTCT	NA	False	NA	NA	False	NA	NA	NA	42455094	42461466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_42455435_42457032_42457202_42458421_42458581_42458730_42458845_42460252
tx.14772	chr13	+	1481	4	NNC	ENSMUSG00000054021.7	novel	435	4	NA	NA	-1	-3744	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	91.46705539276	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTCTTTATGTGTATGT	NA	False	NA	NA	False	NA	NA	NA	43519112	43526464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_43519217_43521870_43521941_43524194_43524345_43525307
tx.14773	chr13	+	1147	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	501	-3255	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	296.576735432839	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAATGAAAGCTTAGATG	NA	False	NA	NA	False	NA	NA	NA	51255416	51303275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_51255548_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
tx.14774	chr13	+	1817	7	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	379	junction_1	14.3488288333539	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	NA	False	NA	NA	NA	54937264	54944588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
tx.14775	chr13	+	2240	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	92	4252	36	-868	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATTTGTTGTAAGTCC	NA	False	NA	NA	False	NA	NA	NA	56850914	56885938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
tx.14776	chr13	-	1545	10	ISM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	10452	0	242	0	3prime_fragment	FALSE	canonical	0	0	junction_5	59.2785848117509	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGATCTTCACTGTC	NA	False	NA	NA	False	NA	NA	NA	58411550	58381159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011
tx.14777	chr13	-	730	3	ISM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	863	1872	863	-1872	3prime_fragment	FALSE	canonical	3	402	junction_2	26	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCCTGATGGTGGTGCA	NA	False	NA	NA	False	NA	NA	NA	58532176	58529502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_58529824_58530221_58530418_58531963
tx.14778	chr13	-	2516	2	ISM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	37366	0	37358	0	3prime_fragment	FALSE	canonical	3	476	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	59786228	59782809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_59785216_59786118
tx.14779	chr13	+	1442	2	FSM	ENSMUSG00000089875.3	ENSMUST00000162450.3	4862	2	-47	3467	-46	-167	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTCAGAAAGGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	59917732	59919754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_59918161_59918740
tx.1478	chr11	-	502	3	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	15	junction_2	26	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTTTTCTTTTTTA	264	False	NA	NA	False	NA	NA	NA	20089378	20087208	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_20087398_20088488_20088566_20089142
tx.14780	chr13	-	3071	2	ISM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	-26	47572	-26	980	5prime_fragment	FALSE	canonical	3	25	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTTTTGTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	59970987	59966946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_59969925_59970894
tx.14782	chr13	-	1376	11	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	31.255239560752	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACAGTGTGATATTACAG	NA	False	NA	NA	False	NA	NA	NA	64277144	64244955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64268408_64268496_64270132_64270167_64276999
tx.14783	chr13	+	426	3	Antisense	novelGene_ENSMUSG00000113712.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	7	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGCCTTGGTTCCAT	1844	False	NA	NA	False	NA	NA	NA	65705737	65978913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr13_+_65705820_65859114_65859290_65978744
tx.14784	chr13	-	1628	2	Genic_Genomic	ENSMUSG00000114434.2	novel	1508	1	NA	NA	-12533	-1264	multi-exon	FALSE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGGAAAGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	66711817	66699040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr13_-_66700522_66711670
tx.14785	chr13	-	2740	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	884	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	75.9189534964754	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66950624	66939249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_66941596_66942701_66942763_66942962_66943090_66945899_66946010_66950528
tx.14786	chr13	+	1468	2	FSM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	-265	2754	-265	175	multi-exon	FALSE	canonical	3	18	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCCAGAGTCTTAGCTT	NA	False	NA	NA	False	NA	NA	NA	81859194	81898640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_81860102_81898079
tx.14788	chr13	-	3241	5	ISM	ENSMUSG00000021687.15	ENSMUST00000153558.8	1255	8	16715	-2314	16715	-123	3prime_fragment	FALSE	canonical	3	93	junction_1	9.12071817347735	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTGTATAATTTTA	NA	False	NA	NA	False	NA	NA	NA	94366351	94337940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221
tx.14789	chr13	-	1169	4	NNC	ENSMUSG00000052485.8	novel	1161	4	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.816496580927726	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGTTCCCATTTTTC	9045	False	NA	NA	False	NA	NA	NA	98831349	98822744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_98823028_98824855_98824992_98828511_98829226_98831313
tx.1479	chr11	-	978	3	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	32	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAACATGTTGTTTTTCT	264	False	NA	NA	False	NA	NA	NA	20089378	20087214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_20087398_20088488_20088566_20088660
tx.14790	chr13	-	1389	11	ISM	ENSMUSG00000041685.17	ENSMUST00000109403.2	1523	14	261	8622	-6	2040	5prime_fragment	TRUE	canonical	3	252	junction_1	32.5416655996585	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTCTCCTGGAGCTCACT	NA	False	NA	NA	False	NA	NA	NA	98951696	98898969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
tx.14791	chr13	-	1617	10	ISM	ENSMUSG00000049658.14	ENSMUST00000109379.9	7567	38	-232	54640	0	789	5prime_fragment	FALSE	canonical	3	17	junction_2	4.08550584685561	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAGAGAAAAAGAGGAGGA	6759	False	NA	NA	False	NA	NA	NA	100240578	100214452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
tx.14792	chr13	-	1303	11	ISM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-12	12009	-8	28	5prime_fragment	FALSE	canonical	3	174	junction_10	20.4195984289604	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAATCAAGAGATTCA	NA	False	NA	NA	False	NA	NA	NA	100787567	100765995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
tx.14793	chr13	-	1171	3	FSM	ENSMUSG00000021629.11	ENSMUST00000225129.2	589	3	202	-784	202	0	multi-exon	FALSE	canonical	3	263	junction_2	22.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	3660	False	NA	NA	False	NA	NA	NA	100943269	100939155	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100939970_100940369_100940499_100943041
tx.14794	chr13	-	2576	4	ISM	ENSMUSG00000021709.15	ENSMUST00000188997.7	5084	24	86406	-816	55403	0	3prime_fragment	FALSE	canonical	3	24	junction_3	31.6262900483478	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	103970397	103955298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005
tx.14795	chr13	+	3744	11	FSM	ENSMUSG00000042743.14	ENSMUST00000044385.14	3048	11	63	-759	-25	759	multi-exon	FALSE	canonical	3	36	junction_7	16.2775919595006	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTCTTTGACTTATA	NA	False	NA	NA	False	NA	NA	NA	104246311	104279002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
tx.14796	chr13	-	2053	4	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTCTTAGCCATTTC	5962	False	NA	NA	False	NA	NA	NA	107852121	107847330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_107848917_107849772_107849894_107850971_107851195_107851998
tx.14797	chr13	+	1993	8	FSM	ENSMUSG00000021696.10	ENSMUST00000225550.2	2351	8	22	336	22	-336	multi-exon	FALSE	canonical	3	9	junction_3	34.299997025049	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATAAAGACACTGAATTA	NA	False	NA	NA	False	NA	NA	NA	108350965	108420271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_108351035_108393200_108393333_108403723_108403869_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
tx.14798	chr13	+	1681	8	ISM	ENSMUSG00000021756.13	ENSMUST00000184276.8	3009	18	-115	13416	14	7513	5prime_fragment	FALSE	canonical	3	350	junction_7	23.2922865396444	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGTACTAGCATTTG	NA	False	NA	NA	False	NA	NA	NA	112600659	112627663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016
tx.14799	chr13	+	1234	2	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTTTCACCATTTTCA	91	False	NA	NA	False	NA	NA	NA	114335165	114349165	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_114335276_114348041
tx.148	chr1	-	4264	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	77	1854	-10	-1850	multi-exon	TRUE	canonical	2	1032	junction_2	157.733865172392	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	55066563	55026181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
tx.1480	chr11	-	453	2	NNC	ENSMUSG00000085035.2	novel	627	2	NA	NA	-7385	190	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	23	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTTGGCCTCCATTAT	9171	False	NA	NA	False	NA	NA	NA	20103729	20095376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_20095695_20103594
tx.14800	chr13	-	2360	4	FSM	ENSMUSG00000095930.2	ENSMUST00000178142.2	4103	4	-64	1807	-64	-1807	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTGTCTTGCCCGTT	NA	False	NA	NA	False	NA	NA	NA	120217482	120173436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_120174332_120175643_120175913_120189115_120190060_120217230
tx.14801	chr13	-	3007	7	FSM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	-14	74	-13	-73	multi-exon	FALSE	canonical	3	32	junction_6	50.5426112854842	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	NA	False	NA	NA	NA	120252355	120226796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
tx.14802	chr13	-	1428	2	FSM	ENSMUSG00000094027.3	ENSMUST00000225881.2	830	2	0	-598	0	598	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGTCTCTCGTGAGT	NA	False	NA	NA	False	NA	NA	NA	120677483	120675530	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_120676775_120677299
tx.14803	chr14	-	1216	5	NIC	ENSMUSG00000021772.16	novel	738	5	NA	NA	11	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	44.9687391417638	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGAACTCTTCCAGCTT	NA	False	NA	NA	False	NA	NA	NA	4198447	4189251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_4189750_4191150_4191393_4191594_4191853_4192727_4192871_4198372
tx.14806	chr14	-	2785	18	FSM	ENSMUSG00000033885.16	ENSMUST00000036682.9	2812	18	24	3	12	-3	multi-exon	TRUE	canonical	3	68	junction_2	18.5091392369855	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTAGCTTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	14371538	14304658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
tx.14807	chr14	-	3528	3	ISM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	16553	8	15997	-8	3prime_fragment	FALSE	canonical	3	95	junction_2	20.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTCATTTCCTACGGGG	NA	False	NA	NA	False	NA	NA	NA	20010764	19922634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_19926004_19941353_19941470_20010721
tx.14808	chr14	+	1725	8	FSM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-20	2778	1	497	multi-exon	FALSE	canonical	3	134	junction_7	47.5106862308097	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAATATGTTCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	20398307	20418632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
tx.14809	chr14	-	2137	11	ISM	ENSMUSG00000021816.12	ENSMUST00000161989.2	2322	12	14680	0	-7717	0	3prime_fragment	FALSE	canonical	3	102	junction_2	34.294168600507	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTAATCTGGCTCGTT	NA	False	NA	NA	False	NA	NA	NA	20581828	20557738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727
tx.1481	chr11	+	1434	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	1	1392	1	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	1259	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	False	NA	NA	False	NA	NA	NA	20151432	20175464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
tx.14810	chr14	-	1108	5	ISM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	33726	5	-2111	4	3prime_fragment	FALSE	canonical	3	147	junction_2	13.6106575888162	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGATATTAAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	24503394	24498768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238
tx.14811	chr14	-	932	3	Antisense	novelGene_ENSMUSG00000007817.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	2	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAATTTGTCTAGCCTGG	2436	False	NA	NA	False	NA	NA	NA	25591535	25590215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr14_-_25590907_25591157_25591288_25591424
tx.14812	chr14	+	1103	4	NIC	ENSMUSG00000040640.12	novel	3339	8	NA	NA	-20	3	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	17.7451088722749	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGTCTGTTTATTT	2374	False	NA	NA	False	NA	NA	NA	27344432	27375762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_27344572_27345639_27345707_27374643_27375441_27375662
tx.14813	chr14	+	2079	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	127	1536	123	674	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGGTGTGAGTCGTGT	NA	False	NA	NA	False	NA	NA	NA	30547673	30597631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
tx.14814	chr14	+	1426	6	FSM	ENSMUSG00000021918.11	ENSMUST00000227199.2	1317	6	-105	-4	0	4	multi-exon	FALSE	canonical	3	40	junction_5	7.98999374217527	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTATTTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	30673367	30686279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889
tx.14815	chr14	+	1725	9	NIC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	45	junction_1	29.3087017795057	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTATTTGCTTCCCCATT	3526	False	NA	NA	False	NA	NA	NA	30723356	30733946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
tx.14817	chr14	-	1529	2	FSM	ENSMUSG00000021891.9	ENSMUST00000227852.2	692	2	-20	-817	-12	-265	multi-exon	FALSE	canonical	3	247	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTAGCTCTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	31217009	31214543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_31215922_31216858
tx.14818	chr14	-	1306	4	FSM	ENSMUSG00000037833.15	ENSMUST00000225854.2	1150	4	-155	-1	-155	1	multi-exon	FALSE	canonical	3	20	junction_3	4.71404520791032	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTTGCCAATAATTTCC	NA	False	NA	NA	False	NA	NA	NA	40615378	40582338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_40582697_40594486_40594635_40596036_40596197_40614738
tx.14819	chr14	+	1017	3	Antisense	novelGene_ENSMUSG00000091847.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	11	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGATCCATTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	41085315	41102275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr14_+_41085428_41089611_41090056_41101814
tx.1482	chr11	-	2584	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	44	2176	9	-2176	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCAGATAAAATGTGTTG	3099	False	NA	NA	False	NA	NA	NA	20199374	20179212	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
tx.14820	chr14	+	631	7	FSM	ENSMUSG00000037628.11	ENSMUST00000226621.2	634	7	4	-1	4	1	multi-exon	FALSE	canonical	3	26	junction_1	78.2254576351089	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTCTCCAGCATAGT	NA	False	NA	NA	False	NA	NA	NA	46998055	47008978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_46998106_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
tx.14821	chr14	+	417	2	FSM	ENSMUSG00000055128.16	ENSMUST00000140114.3	419	2	2	0	2	0	multi-exon	FALSE	canonical	3	59	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTAGACGTGAAGATGA	633	False	NA	NA	False	NA	NA	NA	47069677	47077871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_47069837_47077613
tx.14822	chr14	-	1043	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	0	1732	0	-1732	multi-exon	FALSE	canonical	3	47	junction_1	5.3665631459995	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGCTTCCGCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	47426870	47393083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
tx.14823	chr14	+	4322	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	-2	combination_of_known_junctions	TRUE	canonical	3	329	junction_35	142.357057734826	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	NA	False	NA	NA	NA	47886773	47974016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
tx.14824	chr14	+	2457	9	NIC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	5	17	intron_retention	FALSE	canonical	3	13	junction_8	38.1042976578758	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGCCTCCTGTAGTCCT	NA	False	NA	NA	False	NA	NA	NA	49303992	49328353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49327656
tx.14825	chr14	+	1307	3	NIC	ENSMUSG00000072572.10	novel	2334	4	NA	NA	33	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAACCTCATTGCAATTC	NA	False	NA	NA	False	NA	NA	NA	52131099	52133259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_52131372_52131545_52131677_52132355
tx.14829	chr14	+	1338	3	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	4453	1217	-223	537	3prime_fragment	FALSE	canonical	3	186	junction_1	24	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	NA	False	NA	NA	NA	54706046	54707737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_54706239_54706492_54706623_54706721
tx.1483	chr11	-	2155	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	16	0	16	0	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3071	False	NA	NA	False	NA	NA	NA	20199402	20188385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
tx.14830	chr14	-	2305	12	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	-2	0	intron_retention	FALSE	canonical	2	44	junction_11	118.32012885626	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3742	False	NA	NA	False	NA	NA	NA	54891154	54879617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54891136
tx.14831	chr14	+	2679	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	48	junction_1	27.5910366989435	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	55797961	55807521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_55798085_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
tx.14832	chr14	+	1855	4	NNC	ENSMUSG00000054509.8	novel	6387	35	NA	NA	22	-72474	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.0332779621949	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAGAAAGTGATGGTC	1109	False	NA	NA	False	NA	NA	NA	56813097	56824775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_56813188_56821615_56821749_56823013_56823210_56823339
tx.14833	chr14	-	2587	8	NNC	ENSMUSG00000040123.18	novel	5351	8	NA	NA	-1	405	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.6940132432954	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8903	False	NA	NA	False	NA	NA	NA	57049091	57030379	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57042218_57042321_57048196_57048317_57049048
tx.14834	chr14	-	3511	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	445	4724	4	26	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTTCTGCAAAGTGCA	NA	False	NA	NA	False	NA	NA	NA	57902442	57819701	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
tx.14835	chr14	-	2738	4	FSM	ENSMUSG00000021952.17	ENSMUST00000172539.8	707	4	-23	-2008	2	2008	multi-exon	FALSE	canonical	3	7	junction_1	139.907906217705	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGCCAATAGAGATTT	NA	False	NA	NA	False	NA	NA	NA	57902444	57877227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_57879618_57880538_57880681_57885875_57885982_57902344
tx.14836	chr14	-	2925	13	NIC	ENSMUSG00000071350.13	novel	2995	14	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	30.6467326516584	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTGATTATTAT	NA	False	NA	NA	False	NA	NA	NA	59678329	59639457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
tx.14837	chr14	-	2495	14	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	-7353	-7398	at_least_one_novel_splicesite	FALSE	canonical	3	358	junction_3	51.2783331985479	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAGAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	62953821	62930650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747
tx.14839	chr14	-	4560	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	26	-4	26	4	multi-exon	FALSE	non_canonical	0	0	junction_5	42.6759570646689	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	87378634	86892798	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
tx.1484	chr11	-	2780	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	9	-1	-2	0	multi-exon	FALSE	canonical	3	111	junction_1	11	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3053	False	NA	NA	False	NA	NA	NA	20199420	20188385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_20190699_20191885_20192239_20199306
tx.14840	chr14	-	3332	5	NIC	ENSMUSG00000022124.16	novel	3352	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	68.4945253286713	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9801	False	NA	NA	False	NA	NA	NA	103337002	103318469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336791
tx.14841	chr14	-	1668	6	ISM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	82031	-1	6172	1	3prime_fragment	FALSE	canonical	3	253	junction_3	22.7033037243481	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCATACTATTCT	NA	False	NA	NA	False	NA	NA	NA	121534715	121523753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546
tx.14842	chr15	+	1612	4	ISM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	4019	14	2225	-14	3prime_fragment	FALSE	canonical	3	119	junction_1	10.4986771653491	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGTCAAAAAAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	5219059	5247803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_5219285_5237849_5237932_5241479_5241612_5246630
tx.14843	chr15	-	2789	4	ISM	ENSMUSG00000005360.15	ENSMUST00000125997.2	4435	6	8364	-602	105	0	3prime_fragment	FALSE	canonical	3	51	junction_2	3.68178700572909	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	8672626	8663607	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383
tx.14844	chr15	-	687	2	ISM	ENSMUSG00000054115.13	ENSMUST00000191316.2	1391	3	-167	12305	-80	-12305	5prime_fragment	FALSE	canonical	3	227	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGGGAATCTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	9140606	9139439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_9139791_9140270
tx.14845	chr15	+	3203	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	11	4884	11	-246	multi-exon	FALSE	canonical	2	16	junction_6	5.43473386468287	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGCTGTTTCCAGACAC	43	False	NA	NA	False	NA	NA	NA	9140647	9197685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
tx.14846	chr15	-	1926	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	127	7	127	2	multi-exon	TRUE	canonical	3	660	junction_1	60.8163473021321	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCTTTCTGCTTCAG	92	False	NA	NA	False	NA	NA	NA	10470475	10446848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
tx.14847	chr15	-	3636	9	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	1	233	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	108.224015357036	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTAATTTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	12824726	12808498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823708_12824552
tx.14848	chr15	+	2794	7	NIC	ENSMUSG00000022270.17	novel	579	6	NA	NA	-49	-7	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	10.719919153924	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTATTCCTTTTTATGT	25	False	NA	NA	False	NA	NA	NA	25933588	25973766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_25933713_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
tx.14849	chr15	+	551	3	ISM	ENSMUSG00000022235.16	ENSMUST00000070918.14	1155	6	16617	0	13310	0	3prime_fragment	TRUE	canonical	1	1	junction_2	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCGTAGCTTCACTTT	NA	False	NA	NA	False	NA	NA	NA	31585560	31590265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_31585584_31588313_31588406_31589829
tx.1485	chr11	-	3901	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	0	25	0	0	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	7761	False	NA	NA	False	NA	NA	NA	20282713	20252204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
tx.14850	chr15	-	1068	2	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGACTCTCCAATTTC	NA	False	NA	NA	False	NA	NA	NA	36828267	36825372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_36826212_36828038
tx.14852	chr15	-	2038	13	NNC	ENSMUSG00000050891.11	novel	915	12	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	38.5748730825305	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTATCCTTGATCTC	NA	False	NA	NA	False	NA	NA	NA	58805575	58771775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58794155_58794233_58795753_58795818_58798284_58798335_58800532_58800599_58805527
tx.14853	chr15	+	1338	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	6.0736223860962	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGAAGTCATGATTGTC	NA	False	NA	NA	False	NA	NA	NA	61909852	62121376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_61910051_61978996_61979315_62021087_62021202_62047315_62047398_62114022_62114151_62114282_62114411_62121006
tx.14857	chr15	-	3382	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	-20	0	-20	0	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	NA	False	NA	NA	NA	75713784	75626278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
tx.14858	chr15	+	2891	4	FSM	ENSMUSG00000033728.15	ENSMUST00000137649.8	2832	4	5	-64	-1	18	multi-exon	FALSE	canonical	3	40	junction_1	33.8066397160216	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTAGGCTATCCCACTA	NA	False	NA	NA	False	NA	NA	NA	76594847	76599348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76595731_76597066_76597421_76597600_76598186_76598279
tx.14859	chr15	+	1420	6	FSM	ENSMUSG00000022455.5	ENSMUST00000023089.5	1413	6	-2	-5	-2	5	multi-exon	FALSE	canonical	3	14	junction_3	3.32264954516723	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGCCTTATTCTCAT	1998	False	NA	NA	False	NA	NA	NA	82183152	82198829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_82183270_82189871_82189981_82190244_82190387_82190546_82190640_82192723_82192829_82197975
tx.1486	chr11	-	2530	6	ISM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	0	4652	0	-4627	5prime_fragment	FALSE	canonical	3	286	junction_2	12.5698050899765	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTCAGTAGTTACAGTT	7761	False	NA	NA	False	NA	NA	NA	20282713	20256831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
tx.14860	chr15	-	3207	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	-35	14	-26	-10	multi-exon	FALSE	canonical	3	62	junction_10	172.10531659423	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACAGTCCCTTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	83317051	83260332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
tx.14861	chr15	-	2234	13	NNC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	-15	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	26.455413224686	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTGTCCCA	NA	False	NA	NA	False	NA	NA	NA	83395109	83367954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83393853_83393998_83394934
tx.14862	chr15	-	3858	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-13	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_21	32.0725194338633	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTACTCTGGTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	85016178	84948887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011959_85012073_85013871_85014061_85016029
tx.14863	chr15	-	2476	6	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	29499	-1262	-408	0	3prime_fragment	FALSE	canonical	3	571	junction_1	43.1212244724103	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	88585475	88571236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975
tx.14864	chr15	+	1860	5	ISM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	648	4	648	-4	3prime_fragment	FALSE	canonical	3	800	junction_2	51.5770055354128	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAACTTCTGTTTATTG	NA	False	NA	NA	False	NA	NA	NA	88747036	88749925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
tx.14866	chr15	-	2912	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-17	0	-17	0	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCCATGGGACTAC	5199	False	NA	NA	False	NA	NA	NA	89310083	89300607	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
tx.14867	chr15	-	1213	11	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_3	114.705056558113	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	1653	False	NA	NA	False	NA	NA	NA	89313629	89310562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
tx.14868	chr15	-	1536	9	NIC	ENSMUSG00000022621.17	novel	1640	9	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	17.0765738659721	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGGTCTCAGTTACCTT	1359	False	NA	NA	False	NA	NA	NA	89476085	89466733	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_89467634_89467801_89467886_89468112_89468211_89468546_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89476022
tx.14869	chr15	+	1403	8	NIC	ENSMUSG00000052369.9	novel	1455	8	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.5683069266455	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACTGTCTCTGACTGCC	7678	False	NA	NA	False	NA	NA	NA	97862107	97868157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_97862161_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
tx.1487	chr11	+	1616	2	FSM	ENSMUSG00000049800.14	ENSMUST00000109586.3	5515	2	1	3898	1	58	multi-exon	FALSE	canonical	3	14	junction_1	0	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATATATCTATATTATT	NA	False	NA	NA	False	NA	NA	NA	20581979	20599123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_20582274_20597801
tx.14873	chr15	+	3656	15	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	-297	9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6.13787173112595	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTACTTTTTATTTACA	NA	False	NA	NA	False	NA	NA	NA	99122444	99140707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_99122585_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
tx.14874	chr15	+	3189	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	106	junction_21	27.793351723029	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	NA	False	NA	NA	NA	99193106	99214899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
tx.14875	chr15	-	2024	11	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-5	2	intron_retention	FALSE	canonical	2	8	junction_2	106.776823327911	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGTCTCTTTAGTAAC	NA	False	NA	NA	False	NA	NA	NA	99670351	99633470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_99634318_99636545_99636703_99637145_99637203_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
tx.14876	chr15	-	1861	15	ISM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	2	4892	2	139	5prime_fragment	FALSE	canonical	1	68	junction_7	32.718340360085	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGTCTTAGTTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	100320881	100295335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
tx.14877	chr15	+	2863	8	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	81	junction_1	12.9362644830535	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2413	False	NA	NA	False	NA	NA	NA	100366981	100377045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
tx.14878	chr15	-	954	2	ISM	ENSMUSG00000098112.9	ENSMUST00000182814.8	1901	10	24218	3	5432	-3	3prime_fragment	FALSE	canonical	2	83	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGAGGTGTCTTGCCCT	8816	False	NA	NA	False	NA	NA	NA	100543168	100538966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_100539446_100542693
tx.14879	chr15	+	2545	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	-68	0	-68	0	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	101164658	101172676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
tx.1488	chr11	-	3351	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	11	0	11	0	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTGGGTTATTACAT	NA	False	NA	NA	False	NA	NA	NA	20781045	20773575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
tx.14880	chr15	+	4135	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-99	3718	-52	7	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATCTTGTCAGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	102314715	102341121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
tx.14881	chr15	-	3263	3	FSM	ENSMUSG00000036061.11	ENSMUST00000231198.2	491	3	-2	-2770	-2	0	multi-exon	FALSE	canonical	3	15	junction_2	46	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTGCAAATTACT	NA	False	NA	NA	False	NA	NA	NA	103071747	103061716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_103064629_103066043_103066346_103071698
tx.14882	chr15	-	656	8	NIC	ENSMUSG00000022487.15	novel	767	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	42.0432236283236	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAAGTACTTTTTTTTT	8427	False	NA	NA	False	NA	NA	NA	103338832	103310884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103338782
tx.14883	chr15	-	922	11	NIC	ENSMUSG00000022487.15	novel	700	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	51.2206989409555	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAAGTACTTTTTTTTT	8423	False	NA	NA	False	NA	NA	NA	103338836	103310884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338285_103338422_103338603_103338685_103338782
tx.14885	chr16	-	2102	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	-91	-1732	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTTCTCCATGTTTTCC	NA	False	NA	NA	False	NA	NA	NA	4359771	4299823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
tx.14886	chr16	-	2608	7	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	232.266190680722	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	NA	False	NA	NA	NA	4607798	4584703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607239_4607330_4607694
tx.14887	chr16	+	2084	17	FSM	ENSMUSG00000022517.18	ENSMUST00000229038.2	2250	17	-18	184	1	81	multi-exon	FALSE	canonical	3	40	junction_1	129.828191757415	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCTCCATGGGCCAC	2925	False	NA	NA	False	NA	NA	NA	4704113	4755101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
tx.14888	chr16	-	3433	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	29	766	29	241	multi-exon	TRUE	canonical	3	113	junction_1	25.0911382243075	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGCACCACCATACC	9727	False	NA	NA	False	NA	NA	NA	13720962	13651777	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
tx.14889	chr16	+	967	5	FSM	ENSMUSG00000022792.17	ENSMUST00000159683.2	1528	5	557	4	-15	-4	multi-exon	FALSE	canonical	3	45	junction_2	137.095769446034	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTCTTTACACAAGA	NA	False	NA	NA	False	NA	NA	NA	16121401	16127492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073_16125245_16127195
tx.1489	chr11	-	2075	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-31	0	-31	0	multi-exon	TRUE	canonical	3	305	junction_7	61.1714853284106	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	NA	False	NA	NA	NA	21321232	21271672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
tx.14890	chr16	+	1689	2	ISM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	-20	17675	-20	734	5prime_fragment	FALSE	canonical	3	254	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACTGTCTTTTTTTGTTT	3439	False	NA	NA	False	NA	NA	NA	17269830	17287623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_17270653_17286756
tx.14891	chr16	-	1552	5	ISM	ENSMUSG00000003528.16	ENSMUST00000129270.8	816	6	136	-459	136	0	intron_retention	FALSE	canonical	3	1746	junction_4	71.2758724955367	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	17745071	17743086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519
tx.14893	chr16	-	2979	7	FSM	ENSMUSG00000022853.8	ENSMUST00000023559.7	2981	7	3	-1	3	1	multi-exon	FALSE	canonical	3	14	junction_3	3.35410196624968	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGTGTAAAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	21606554	21580035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_21582087_21584975_21585318_21589165_21589271_21592244_21592357_21594094_21594262_21596548_21596653_21606456
tx.14894	chr16	+	2186	10	ISM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	18356	5	-550	-5	3prime_fragment	FALSE	canonical	3	339	junction_4	52.3388768000552	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	NA	False	NA	NA	False	NA	NA	NA	21846758	21866626	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
tx.14895	chr16	+	3231	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	2	-3	2	0	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	29398199	29470697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
tx.14896	chr16	-	2901	3	NNC	ENSMUSG00000047434.15	novel	3470	4	NA	NA	30564	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGCTACAGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	30849681	30773967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_30776553_30826531_30826665_30849498
tx.14897	chr16	-	2274	7	NIC	ENSMUSG00000022772.13	novel	2804	6	NA	NA	12	9	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	18.8826787176914	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTAATTTTTATTTAA	NA	False	NA	NA	False	NA	NA	NA	31821969	31794630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_31794848_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
tx.14898	chr16	-	2324	3	FSM	ENSMUSG00000035578.17	ENSMUST00000126793.2	713	3	-12	-1599	-7	1599	multi-exon	FALSE	canonical	2	4	junction_1	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCAGCCTACTTTTG	1165	False	NA	NA	False	NA	NA	NA	32876567	32868277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_32870484_32873993_32874065_32876520
tx.14899	chr16	+	2888	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	-61	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	48.533493589479	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACGAATGTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	33201144	33319015	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33317400
tx.1490	chr11	-	1289	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	119	550	119	-455	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	1786	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	21521815	21507241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
tx.14900	chr16	+	2680	13	FSM	ENSMUSG00000035506.17	ENSMUST00000059056.15	3166	13	-241	727	-190	0	multi-exon	FALSE	canonical	3	33	junction_4	11.0754984838908	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	33338457	33483778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
tx.14901	chr16	+	3429	11	FSM	ENSMUSG00000022906.16	ENSMUST00000114878.8	3548	11	119	0	119	0	multi-exon	FALSE	canonical	3	21	junction_5	7.49399759807808	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTGAATCGTGAATG	NA	False	NA	NA	False	NA	NA	NA	35758958	35792975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_35759431_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
tx.14902	chr16	+	2104	7	FSM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	0	200	0	1	multi-exon	TRUE	canonical	3	15	junction_1	6.0184900284226	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGTCTTGTTTTTTT	3912	False	NA	NA	False	NA	NA	NA	38562625	38589211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
tx.14903	chr16	-	1476	6	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	886.293856460711	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850051	55835869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_55836787_55837553_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
tx.14904	chr16	+	1116	6	FSM	ENSMUSG00000052917.16	ENSMUST00000201011.2	914	6	-76	-126	0	7	multi-exon	FALSE	canonical	3	14	junction_5	10.507140429251	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTTCTTCTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	55895766	55946909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55946503
tx.14905	chr16	+	2154	6	NIC	ENSMUSG00000022744.13	novel	1540	6	NA	NA	11	-11	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	183.063486255452	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTAAATTGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	58548298	58554603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_58548448_58549542_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
tx.14906	chr16	-	1962	7	FSM	ENSMUSG00000004843.8	ENSMUST00000231259.2	1722	7	-240	0	-34	0	multi-exon	FALSE	canonical	1	1	junction_6	119.881422895941	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCCTAACGCGCATCA	NA	False	NA	NA	False	NA	NA	NA	65359646	65336013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65350904_65350961_65359360
tx.14907	chr16	+	2886	6	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	17462	3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.2727787306346	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTTGTGTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	72820770	72842986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_72820840_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
tx.14908	chr16	-	2223	5	NNC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	1	503	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	130.840312977308	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTTCCCGTAATCTA	3193	False	NA	NA	False	NA	NA	NA	78373595	78341073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373184
tx.14909	chr16	-	2568	14	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	93893	4763	-52248	2	3prime_fragment	FALSE	canonical	3	25	junction_10	13.9699593168201	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGCAAGACGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	84876761	84751335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727
tx.1491	chr11	+	1193	4	NNC	ENSMUSG00000049904.8	novel	1568	4	NA	NA	169	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	27.8846831711525	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATCTGTGTAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	22462256	22469236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_22462376_22467187_22467292_22467407_22467522_22468380
tx.14910	chr16	-	2395	5	ISM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	49934	610	49885	-610	3prime_fragment	FALSE	canonical	3	176	junction_4	15.6584641647896	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCAGCATTGGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	87179566	87174148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502
tx.14911	chr16	-	1665	10	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	39.6842475822944	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	NA	False	NA	NA	NA	93400703	93380344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93393185_93393224_93396099_93396196_93398525_93398687_93400453
tx.14912	chr17	-	2244	6	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10140	-12881	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	272.183320576409	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACCCAAACCACTCG	2328	False	NA	NA	False	NA	NA	NA	6744561	6721681	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_6723410_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
tx.14914	chr17	+	1711	2	Antisense	novelGene_ENSMUSG00000097624.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTCATTCATTGTAA	NA	False	NA	NA	False	NA	NA	NA	15461224	15463990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_+_15461391_15462445
tx.14915	chr17	+	2978	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	44	1398	-2	-1398	multi-exon	TRUE	canonical	2	12	junction_2	12.6526677028997	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAGTCTTTGAACTCA	NA	False	NA	NA	False	NA	NA	NA	15616507	15652302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
tx.14916	chr17	+	623	2	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	15	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGACAGGAGGGATCATA	NA	False	NA	NA	False	NA	NA	NA	17724926	17727492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_+_17725212_17727154
tx.14917	chr17	+	2051	4	FSM	ENSMUSG00000023882.16	ENSMUST00000167749.2	822	4	-16	-1213	9	4	multi-exon	FALSE	canonical	3	11	junction_1	10.1980390271856	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTTGTTTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21643503	21655420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_21643580_21647998_21648091_21650456_21650584_21653664
tx.14918	chr17	+	2710	6	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	38.4010416525385	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21787244	21808961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_21787508_21789277_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
tx.14919	chr17	+	2336	5	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	25	576	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	12.0933866224478	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGTTTGTGAGCACCAT	NA	False	NA	NA	False	NA	NA	NA	21869569	21882032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_21869695_21871186_21871266_21875011_21875249_21876434_21876528_21880230
tx.1492	chr11	+	1378	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	190	0	190	0	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTATCTGTGTAGTTC	NA	False	NA	NA	False	NA	NA	NA	22462277	22469234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
tx.14920	chr17	-	3172	5	NIC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	32.101401838549	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181464	22145940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_22148471_22149346_22149474_22151973_22152095_22172868_22173035_22181236
tx.14921	chr17	-	3664	5	FSM	ENSMUSG00000096433.3	ENSMUST00000179996.3	4882	5	-9	1227	-9	-1227	multi-exon	TRUE	canonical	2	8	junction_3	10.6066017177982	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTTTCATTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	22444606	22417472	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_22420791_22421656_22421784_22424285_22424334_22442991_22443076_22444519
tx.14922	chr17	+	536	3	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTGTAGTATTGTTC	NA	False	NA	NA	False	NA	NA	NA	22975889	22986026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_+_22975989_22982523_22982644_22985709
tx.14923	chr17	-	2550	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	24	1	24	-1	multi-exon	FALSE	canonical	3	32	junction_1	3.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCGCCTGACCACATTCA	NA	False	NA	NA	False	NA	NA	NA	23959348	23955160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_23956974_23957113_23957336_23958833
tx.14924	chr17	-	693	3	FSM	ENSMUSG00000023911.13	ENSMUST00000024704.10	694	3	3	-2	3	2	multi-exon	FALSE	canonical	3	11	junction_1	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTAGTTTTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	24005052	23995887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_23996074_23998601_23999031_24004974
tx.14925	chr17	+	1263	6	FSM	ENSMUSG00000050762.6	ENSMUST00000059482.6	1253	6	2	-12	2	12	multi-exon	FALSE	canonical	2	6	junction_4	4.88262224629348	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAGAAAA	4533	False	NA	NA	False	NA	NA	NA	24257119	24264940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24257336_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
tx.14926	chr17	-	1585	9	FSM	ENSMUSG00000024142.16	ENSMUST00000179163.3	3340	9	7	1748	7	3	multi-exon	FALSE	canonical	3	12	junction_8	23.0813777751676	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	9594	False	NA	NA	False	NA	NA	NA	24698045	24694272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
tx.14927	chr17	+	808	5	NIC	ENSMUSG00000041429.4	novel	893	6	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	115.832853716033	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGATTTCTTGGCCCGTTG	913	False	NA	NA	False	NA	NA	NA	24851660	24857807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_24851738_24852900_24853140_24854561_24854722_24857397_24857504_24857581
tx.14928	chr17	+	1852	5	NIC	ENSMUSG00000041199.4	novel	1745	6	NA	NA	5	2	intron_retention	FALSE	canonical	3	41	junction_1	16.0682139642214	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGTGACCATGAGCAT	NA	False	NA	NA	False	NA	NA	NA	25946710	25950434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_25946822_25947176_25947621_25947799_25947903_25948041_25948144_25949342
tx.14929	chr17	+	1263	2	ISM	ENSMUSG00000024186.16	ENSMUST00000139639.2	1241	3	61	-4	61	0	intron_retention	FALSE	canonical	3	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCATTCTTCTGTGGGC	NA	False	NA	NA	False	NA	NA	NA	26426876	26430293	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_26427277_26429430
tx.1493	chr11	-	698	2	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTTGGTTCCATTTC	NA	False	NA	NA	False	NA	NA	NA	22560639	22550330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_22550607_22560217
tx.14930	chr17	+	1096	3	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	1	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGCTCCAGCCTGGTG	NA	False	NA	NA	False	NA	NA	NA	27449605	27455728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_+_27449685_27453543_27453685_27454852
tx.14931	chr17	+	400	3	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTGTTCCATCTTCC	NA	False	NA	NA	False	NA	NA	NA	27457791	27458368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_+_27457828_27457913_27458160_27458250
tx.14932	chr17	+	2580	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	284	0	-5	0	multi-exon	FALSE	canonical	3	64	junction_10	10.6092512939298	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	False	NA	NA	False	NA	NA	NA	28396386	28424860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
tx.14933	chr17	+	2042	10	ISM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	9255	6	0	-6	3prime_fragment	FALSE	canonical	3	110	junction_1	15.2542242682049	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCTCCTGCCCTTCCC	NA	False	NA	NA	False	NA	NA	NA	28436006	28447576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
tx.14935	chr17	+	1394	9	ISM	ENSMUSG00000007570.17	ENSMUST00000114803.9	2025	10	2347	0	213	0	3prime_fragment	FALSE	canonical	3	100	junction_3	22.1232343928278	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	2653	False	NA	NA	False	NA	NA	NA	28534839	28545546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
tx.14938	chr17	-	2477	13	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-1476	2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_12	27.4969695299925	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGACCCCCCCTCTCCTT	6648	False	NA	NA	False	NA	NA	NA	29404553	29376887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29404334
tx.14939	chr17	-	1348	7	NIC	ENSMUSG00000062202.15	novel	1272	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	40.0641846153006	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCCCTGTCAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	30795233	30728447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_30728501_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
tx.1494	chr11	-	2605	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	462	-10	-94	10	multi-exon	FALSE	canonical	3	288	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGATACTCTTTCTGTT	4431	False	NA	NA	False	NA	NA	NA	22809639	22784736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_22787196_22809493
tx.14940	chr17	+	1710	11	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-2	155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	267.401589374484	4	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAACTATGAAGC	NA	False	NA	NA	False	NA	NA	NA	32255381	32276160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529
tx.14941	chr17	-	1765	2	ISM	ENSMUSG00000002625.11	ENSMUST00000235387.2	800	4	-14	5825	4	-5825	5prime_fragment	FALSE	canonical	3	395	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCTTTTTTTCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	32569577	32562724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_32564373_32569460
tx.14942	chr17	+	2034	9	ISM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	13262	-800	3473	5	3prime_fragment	FALSE	canonical	3	28	junction_1	14.0973180073374	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTCCGTTTATTTGG	NA	False	NA	NA	False	NA	NA	NA	32700697	32712253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
tx.14943	chr17	+	671	6	NIC	ENSMUSG00000048440.17	novel	2227	13	NA	NA	2	529	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	29.990665214363	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCGTTGACTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	32755533	32763928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_32755630_32755971_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856
tx.14944	chr17	-	2414	5	FSM	ENSMUSG00000003929.12	ENSMUST00000235063.2	812	5	22	-1624	22	687	multi-exon	FALSE	canonical	2	6	junction_3	15.2540978100968	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTTTTTTTCCAAT	NA	False	NA	NA	False	NA	NA	NA	33577820	33552659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33577707
tx.14945	chr17	-	479	2	FSM	ENSMUSG00000092564.3	ENSMUST00000174467.2	462	2	-18	1	-18	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATATTCCCTTTTAC	1205	False	NA	NA	False	NA	NA	NA	34128201	34127156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34127561_34128126
tx.14946	chr17	-	531	6	FSM	ENSMUSG00000073422.12	ENSMUST00000173425.9	709	6	260	-82	260	0	multi-exon	FALSE	canonical	3	139	junction_4	24.8885515850159	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	34246225	34245006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176
tx.14947	chr17	+	1646	6	ISM	ENSMUSG00000039656.18	ENSMUST00000173354.9	2502	10	3474	-4	-653	0	3prime_fragment	FALSE	canonical	3	65	junction_3	64.1791243318261	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	False	NA	NA	False	NA	NA	NA	34254643	34257373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
tx.14948	chr17	+	1536	6	NIC	ENSMUSG00000040482.17	novel	1519	7	NA	NA	20	-5	intron_retention	FALSE	canonical	3	41	junction_1	52.9580966425343	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTCTCTTGCTGTGTCT	2996	False	NA	NA	False	NA	NA	NA	35056014	35058157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35056218_35056368_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
tx.14949	chr17	+	1184	8	ISM	ENSMUSG00000007034.16	ENSMUST00000169230.2	2246	18	9786	82	9786	-2	3prime_fragment	FALSE	canonical	3	13	junction_4	6.91641053537726	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTTTATGGCTTTATT	4175	False	NA	NA	False	NA	NA	NA	35146480	35149330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
tx.1495	chr11	-	2712	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	15	-125	15	7	multi-exon	FALSE	canonical	3	85	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAGTGATACTCTTTCT	3597	False	NA	NA	False	NA	NA	NA	22810473	22784739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_22787196_22810217
tx.14950	chr17	+	1497	7	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	788	9	422	-9	3prime_fragment	FALSE	canonical	3	37	junction_2	6.22941053034359	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAATCTGGGTCACT	2507	False	NA	NA	False	NA	NA	NA	35482493	35486466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
tx.14952	chr17	+	3335	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19741	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	56.2899635814414	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	NA	False	NA	NA	NA	43347199	43400080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_43347446_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
tx.14953	chr17	+	1615	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	26	3177	-8	-3177	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGGCTGTTTCCTGA	NA	False	NA	NA	False	NA	NA	NA	44389761	44394273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_44389874_44391537_44392402_44393634
tx.14954	chr17	+	4491	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	-6	-1907	-6	-1358	multi-exon	FALSE	canonical	3	41	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATATGCATGATTGAA	NA	False	NA	NA	False	NA	NA	NA	45744784	45751130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_45745154_45747008
tx.14955	chr17	-	2106	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	40	junction_13	662.162844877372	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	45906823	45896125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906720
tx.14956	chr17	-	3250	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	-12	0	-12	0	multi-exon	TRUE	canonical	3	10	junction_7	5.44426303552648	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7111	False	NA	NA	False	NA	NA	NA	46513583	46482280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
tx.14957	chr17	-	2646	12	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	-1	4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	147.723328618678	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTCCTTCCCACTT	5832	False	NA	NA	False	NA	NA	NA	46593926	46568792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46591341_46591471_46593271_46593366_46593885
tx.14958	chr17	-	2544	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_7	97.6076328982524	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5831	False	NA	NA	False	NA	NA	NA	46593927	46568799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593271_46593366_46593885
tx.14959	chr17	-	1290	8	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-19	237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.326382569461	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGCCTGTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	46985232	46978146	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_46978168_46978360_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
tx.1496	chr11	+	1199	2	NNC	ENSMUSG00000092626.2	novel	663	2	NA	NA	875	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTGTACTTGATTAAC	NA	False	NA	NA	False	NA	NA	NA	22809805	22811264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_22810580_22810839
tx.14960	chr17	-	909	2	ISM	ENSMUSG00000032717.15	ENSMUST00000113280.8	1281	4	12354	2	12282	-2	3prime_fragment	FALSE	canonical	2	6	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAGGACTCTTTACA	NA	False	NA	NA	False	NA	NA	NA	48131812	48126254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_48127090_48131738
tx.14961	chr17	+	1158	3	NNC	ENSMUSG00000051682.16	novel	513	2	NA	NA	-41	13	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.5	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGCCTGATGATCCTAT	NA	False	NA	NA	False	NA	NA	NA	48579425	48582401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_48579460_48579716_48579847_48581407
tx.14962	chr17	-	3536	9	NIC	ENSMUSG00000023994.14	novel	3706	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	13.067134345372	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	48716782	48693916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
tx.14964	chr17	+	1388	10	ISM	ENSMUSG00000071054.13	ENSMUST00000182378.8	3628	14	3480	-14	-147	0	3prime_fragment	FALSE	canonical	3	524	junction_3	43.549319281437	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	NA	False	NA	2	True	NA	NA	NA	56908249	56913294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
tx.14965	chr17	+	2773	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-10	14	combination_of_known_junctions	FALSE	canonical	3	71	junction_10	30.9070689904469	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGCAACCCTGCCATTT	NA	False	NA	NA	False	NA	NA	NA	64170999	64446206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
tx.14966	chr17	-	3399	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	74	0	-38	0	multi-exon	TRUE	canonical	3	62	junction_1	10.1775897605147	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCCTTTCCTCATT	NA	False	NA	NA	False	NA	NA	NA	66079673	65958723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
tx.14967	chr17	-	1853	2	ISM	ENSMUSG00000024096.18	ENSMUST00000232848.2	793	5	6855	-1416	6855	4	3prime_fragment	FALSE	canonical	3	596	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTATTGTCCACTCTTC	NA	False	NA	NA	False	NA	NA	NA	66159185	66155408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_66157191_66159114
tx.14968	chr17	+	4184	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-43	0	-1	0	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGATCAAGTATGAGA	NA	False	NA	NA	False	NA	NA	NA	66430564	66459169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
tx.14969	chr17	+	2005	7	ISM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	25047	0	4951	0	3prime_fragment	FALSE	canonical	3	130	junction_2	27.5560035805872	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGATCAAGTATGAGA	NA	False	NA	NA	False	NA	NA	NA	66455654	66459169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
tx.1497	chr11	-	776	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	123	3609	-7	14	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	987	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCTCTCAAAGTCCAAT	NA	False	NA	NA	False	NA	NA	NA	22932259	22849744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_22850058_22906410_22906693_22932078
tx.14970	chr17	-	1604	8	NIC	ENSMUSG00000056121.17	novel	1939	8	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	98.8728311251067	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGTCTTGAGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	78725538	78685310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_78685859_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
tx.14971	chr17	-	2416	3	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	-28	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGTGTTCATTTATAGT	NA	False	NA	NA	False	NA	NA	NA	79662548	79641151	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_79643146_79653068_79653188_79662245
tx.14972	chr17	+	1675	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112349.9	1728	14	55	-2	27	2	multi-exon	FALSE	canonical	3	262	junction_11	233.064406873892	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84013646	84100306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
tx.14973	chr17	+	1080	2	ISM	ENSMUSG00000055817.19	ENSMUST00000176054.3	765	6	2135	27341	2135	0	internal_fragment	FALSE	canonical	3	1051	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTGTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84098484	84100304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_84099231_84099970
tx.14974	chr17	+	4524	4	NNC	ENSMUSG00000071037.7	novel	741	4	NA	NA	-3	-36018	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	37.6769897358528	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGTCCATCTGTGATG	2224	False	NA	NA	False	NA	NA	NA	85398030	85437918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_85398292_85403917_85404091_85421210_85421276_85433893
tx.14975	chr17	+	3244	2	NNC	ENSMUSG00000037104.10	novel	4648	3	NA	NA	-435	-1211	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCGTTTTATACATT	NA	False	NA	NA	False	NA	NA	NA	87414671	87444056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_87414909_87441049
tx.14976	chr17	+	353	2	FSM	ENSMUSG00000034709.9	ENSMUST00000189734.2	695	2	-2	344	-2	-344	multi-exon	FALSE	canonical	3	72	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAGAAAAAGACTGAGTT	NA	False	NA	NA	False	NA	NA	NA	88837641	88850520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_88837747_88850272
tx.14977	chr17	+	2488	2	FSM	ENSMUSG00000033855.16	ENSMUST00000137138.2	767	2	-13	-1708	-13	2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAGGTAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	88905098	88944965	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_88905170_88942548
tx.14978	chr17	+	1254	10	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-15	3	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_6	46.65343727826	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCCCCTCCCATTTC	NA	False	NA	NA	False	NA	NA	NA	95057512	95082563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071311_95074284_95074376_95078561_95078667_95079284_95079389_95082319
tx.14979	chr17	+	1280	10	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	10	3	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	48.1350979465191	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCCCCTCCCATTTC	NA	False	NA	NA	False	NA	NA	NA	95057549	95082563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
tx.1498	chr11	+	1936	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	105	443	-2	186	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	1656	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	22940623	22953337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
tx.14980	chr18	-	1888	4	NIC	ENSMUSG00000063889.17	novel	2662	10	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	34.3737626039914	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTGTATGTCTAT	76	False	NA	NA	False	NA	NA	NA	3337613	3266353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_3267733_3273421_3273579_3325360_3325479_3337379
tx.14981	chr18	-	3068	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	50	93	24	2	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTAGTCTCTGGTTT	-2	True	NA	NA	False	NA	NA	NA	5334389	5210121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
tx.14982	chr18	+	1097	2	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	9592742	9597953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr18_+_9592989_9597102
tx.14983	chr18	+	926	2	NNC	ENSMUSG00000042942.19	novel	8420	33	NA	NA	-21233	-4614	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATATGGTGAATAACAGT	NA	False	NA	NA	False	NA	NA	NA	10532552	10533675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_10532598_10532794
tx.14984	chr18	+	3485	10	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	2615	3	60	-3	3prime_fragment	FALSE	canonical	3	761	junction_8	42.1420291073407	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTTATGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	13107594	13126004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
tx.14985	chr18	-	2144	7	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	-11	-2146	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	63.5883025581138	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCATTTCTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	31742975	31715366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_31716823_31727629_31727688_31730091_31730149_31735775_31735854_31738805_31738864_31740274_31740318_31742581
tx.14986	chr18	+	670	3	ISM	ENSMUSG00000024382.14	ENSMUST00000142213.8	2781	14	25262	-2	8347	2	3prime_fragment	FALSE	canonical	3	118	junction_2	6.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCTATTTTATTGAA	1021	False	NA	NA	False	NA	NA	NA	32398668	32403206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_32398790_32400216_32400370_32402810
tx.14987	chr18	-	3100	15	ISM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	13	1104	0	891	intron_retention	FALSE	canonical	3	906	junction_9	81.1178281317759	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCCATATAATATTTG	NA	False	NA	NA	False	NA	NA	NA	34784775	34765839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442
tx.14988	chr18	+	1886	8	FSM	ENSMUSG00000038555.8	ENSMUST00000043484.8	1926	8	37	3	37	-3	multi-exon	FALSE	canonical	2	3	junction_2	2.56347977784662	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGATCTCTGCGTT	NA	False	NA	NA	False	NA	NA	NA	34973678	34980513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_34973841_34975506_34975580_34975909_34975987_34978304_34978426_34978627_34978742_34978997_34979146_34979241_34979373_34979453
tx.14989	chr18	+	3400	2	FSM	ENSMUSG00000046668.10	ENSMUST00000235169.2	857	2	-13	-2530	-13	5	multi-exon	FALSE	canonical	3	58	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTTCTTGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	35963353	35994746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_35963453_35991445
tx.1499	chr11	+	1288	3	FSM	ENSMUSG00000049811.18	ENSMUST00000151877.2	1047	3	-230	-11	-144	0	multi-exon	TRUE	canonical	3	12	junction_2	2	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCCTGACACGGTTTG	NA	False	NA	NA	False	NA	NA	NA	22970325	22973741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_22971134_22971493_22971662_22973429
tx.14990	chr18	+	1638	9	ISM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	76	2551	2	14	5prime_fragment	FALSE	canonical	3	53	junction_4	7.36545993132812	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTGCACTTCTTGTA	NA	False	NA	NA	False	NA	NA	NA	36868196	36872899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207
tx.14991	chr18	+	1733	3	FSM	ENSMUSG00000019143.16	ENSMUST00000124204.2	769	3	-541	-423	-541	182	multi-exon	FALSE	canonical	3	117	junction_1	4.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGTTCATTTCCTAG	2212	False	NA	NA	False	NA	NA	NA	36922524	36924929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36923304_36923521_36923669_36924122
tx.14992	chr18	+	2955	10	ISM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	15342	5505	15342	-5505	3prime_fragment	FALSE	canonical	2	46	junction_9	8.02465337123013	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTGTGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	44528935	44552531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
tx.14993	chr18	+	3363	9	ISM	ENSMUSG00000034653.12	ENSMUST00000037763.11	7215	30	36527	16	9038	-16	3prime_fragment	FALSE	canonical	3	38	junction_3	9.32737905308882	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTATCAAATGAAATACTAT	NA	False	NA	NA	False	NA	NA	NA	44997339	45022768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
tx.14994	chr18	-	1645	4	ISM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	24277	8	3199	-8	3prime_fragment	FALSE	canonical	3	48	junction_3	14.6590889515307	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCCGTTGGTTGTAC	NA	False	NA	NA	False	NA	NA	NA	46420718	46415225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416
tx.14995	chr18	+	2088	9	NIC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	-19	-664	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	242.403460165073	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGTTACTTGTGACTT	NA	False	NA	NA	False	NA	NA	NA	52598745	52624339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_52598858_52608667_52608757_52609371_52609445_52612498_52612576_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
tx.14996	chr18	-	1211	6	NNC	ENSMUSG00000024592.16	novel	726	6	NA	NA	14	526	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	44.1017006474807	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTACTCTGATTTA	NA	False	NA	NA	False	NA	NA	NA	57108412	57090159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_57090994_57091189_57091260_57091594_57091652_57095472_57095591_57106455_57106557_57108381
tx.14997	chr18	-	1021	4	NIC	ENSMUSG00000024592.16	novel	726	6	NA	NA	7	517	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	32.7854981491648	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATGTGTTTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	57108419	57090168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_57090994_57091594_57091652_57106455_57106557_57108381
tx.14998	chr18	-	4462	25	FSM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	67	0	14	0	multi-exon	FALSE	canonical	2	677	junction_9	198.19802369656	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	NA	False	NA	NA	NA	60981976	60946826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
tx.14999	chr18	+	586	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183083.8	483	3	74	-177	-37	-3	multi-exon	FALSE	canonical	3	10	junction_1	32.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACGAATGACTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	61772686	61780540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_61772804_61778233_61778437_61780274
tx.15	chr1	+	1596	10	NIC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-2	-15	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	7.71402442564879	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACCTAGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	9978860	9991476	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9991052
tx.1500	chr11	+	4448	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-47	1603	-10	413	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGTGCATATCATCCC	NA	False	NA	NA	False	NA	NA	NA	23206030	23246646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
tx.15000	chr18	-	2125	10	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	16.5492157883652	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGAGTTTGGATCTTT	NA	False	NA	NA	False	NA	NA	NA	67378373	67358118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378176
tx.15001	chr18	+	2731	7	NNC	ENSMUSG00000038903.14	novel	1235	8	NA	NA	43	8199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.5470053837925	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGTGTAAGACCACAC	NA	False	NA	NA	False	NA	NA	NA	70058579	70085314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70083301
tx.15002	chr18	-	3463	8	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	6	2	intron_retention	FALSE	non_canonical	0	0	junction_5	77.2488689567818	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	70605569	70585280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602568_70602849_70604743_70605051_70605361
tx.15003	chr18	-	2423	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_9	93.0357690406634	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663341	70641755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661896_70663258
tx.15004	chr18	+	2835	15	FSM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	-2	0	-2	0	multi-exon	FALSE	canonical	3	25	junction_10	20.6853245819645	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCATAAGGTTGCCATG	NA	False	NA	NA	False	NA	NA	NA	74401243	74415803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
tx.15005	chr18	+	2584	11	NIC	ENSMUSG00000024563.17	novel	1305	8	NA	NA	56	433	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.1644197742522	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGCCTCATTT	NA	False	NA	NA	False	NA	NA	NA	76375172	76438798	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
tx.15006	chr18	-	2704	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	18	3314	6	12	multi-exon	FALSE	canonical	3	70	junction_1	76	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTTCTGTCATTAAAC	NA	False	NA	NA	False	NA	NA	NA	88912428	88886606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_88889043_88905332_88905458_88912285
tx.15007	chr18	-	2620	3	FSM	ENSMUSG00000056153.16	ENSMUST00000123826.2	2921	3	-20	321	-20	0	multi-exon	FALSE	canonical	3	11	junction_1	105.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAATTGTTGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	88912360	88886618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_88889043_88905336_88905458_88912285
tx.15008	chr18	-	2739	4	NIC	ENSMUSG00000056153.16	novel	2814	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	88.3792333576666	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAATTGTTGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	88912405	88886618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_88889043_88905115_88905190_88905336_88905458_88912285
tx.15009	chr19	+	4314	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	3	0	3	0	multi-exon	TRUE	canonical	3	230	junction_1	37.3718386086055	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCTGTCCCTGTCTCC	NA	False	NA	NA	False	NA	NA	NA	3373287	3435733	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
tx.1501	chr11	+	3012	14	ISM	ENSMUSG00000020290.15	ENSMUST00000020538.13	5145	26	26551	584	-2052	-584	3prime_fragment	FALSE	canonical	3	1745	junction_9	167.79181945064	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	NA	False	NA	NA	NA	23232591	23247013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
tx.15010	chr19	+	2868	9	NNC	ENSMUSG00000045098.20	novel	2975	10	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_7	94.9986842014141	6	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTCTTGAGTCTGG	NA	False	NA	NA	False	NA	NA	NA	3818135	3858835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
tx.15011	chr19	-	1823	10	FSM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	57	44	-24	-44	multi-exon	FALSE	canonical	2	3	junction_9	3.58322566591047	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTATCGTCGTGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	3979751	3963534	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3979695
tx.15012	chr19	-	1394	8	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_4	123.357618495237	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTTGGAACCTTGGG	NA	False	NA	NA	False	NA	NA	NA	4675665	4672620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674180_4674712_4674792_4675040_4675125_4675220_4675324_4675460
tx.15013	chr19	-	1095	9	FSM	ENSMUSG00000006464.10	ENSMUST00000235498.2	1244	9	-9	158	0	-158	multi-exon	FALSE	canonical	2	10	junction_2	3.11247489949718	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTGTTTGTTTGTT	5074	False	NA	NA	False	NA	NA	NA	4956655	4948987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
tx.15014	chr19	-	1782	6	ISM	ENSMUSG00000024901.16	ENSMUST00000025834.15	4110	7	44	3783	9	1486	5prime_fragment	FALSE	canonical	1	3	junction_3	4.35430821141545	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAAACGAACCACGC	8750	False	NA	NA	False	NA	NA	NA	4993111	4983527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_4984584_4984930_4985126_4986145_4986248_4988076_4988207_4991787_4991941_4992965
tx.15015	chr19	-	2295	20	FSM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	253	2543	137	-7	multi-exon	FALSE	canonical	3	368	junction_1	46.7672968579718	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTCTTGGTTGTGC	9293	False	NA	NA	False	NA	NA	NA	5438478	5430093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
tx.15016	chr19	-	1429	7	ISM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	261	-1	11	1	3prime_fragment	FALSE	canonical	3	533	junction_3	37.9853773034952	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCAGCTTTTTCC	6701	False	NA	NA	False	NA	NA	NA	6134712	6130790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381
tx.15017	chr19	+	1047	7	NNC	ENSMUSG00000047656.10	novel	1103	7	NA	NA	-9	-15	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	14.8174071805952	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGCTTCAAACCAGGAT	NA	False	NA	NA	False	NA	NA	NA	6973530	6976397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976073_6976137_6976259
tx.15018	chr19	+	1857	19	ISM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	5708	0	-3896	0	3prime_fragment	FALSE	canonical	3	621	junction_2	74.7074954508797	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCTTGTTTCCCTCA	4308	False	NA	NA	False	NA	NA	NA	8740144	8748286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
tx.15019	chr19	+	972	5	NIC	ENSMUSG00000069833.14	novel	830	6	NA	NA	-26	5	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	30.5563004959697	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTGATCACCATGAT	NA	False	NA	NA	False	NA	NA	NA	8966621	9054283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9053939
tx.1502	chr11	+	1946	14	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-4	-56616	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	6.44962271269372	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGATGAAGAAGA	338	False	NA	NA	False	NA	NA	NA	23256911	23314036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790
tx.15020	chr19	+	1971	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	34	-1	34	1	multi-exon	FALSE	canonical	3	22	junction_4	8.51377560192891	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTAGGCGGCAGTGGCC	4002	False	NA	NA	False	NA	NA	NA	9995591	10012820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
tx.15021	chr19	+	2329	8	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	27.7319531315376	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	NA	False	NA	NA	NA	10554817	10567194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_10554928_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
tx.15022	chr19	-	2471	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	-34	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	12.9229818620786	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTCCCTGTTTACA	9755	False	NA	NA	False	NA	NA	NA	10582782	10569560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
tx.15023	chr19	-	631	5	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_3	5.40254569624358	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCCCTACAGTCATACA	NA	False	NA	NA	False	NA	NA	NA	23934134	23884646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr19_-_23885008_23885116_23885214_23894351_23894383_23932923_23932974_23934042
tx.15024	chr19	+	2033	4	FSM	ENSMUSG00000024837.16	ENSMUST00000087525.5	1130	4	-65	-838	23	0	multi-exon	FALSE	canonical	0	0	junction_2	61.5304802516606	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	NA	False	NA	NA	NA	25483004	25581693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_25483566_25487043_25487228_25537230_25537376_25580550
tx.15025	chr19	-	3369	7	NNC	ENSMUSG00000040451.19	novel	4036	10	NA	NA	-3449	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	60.6538447988987	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	4127	False	NA	NA	False	NA	NA	NA	32219675	32100129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219462
tx.15026	chr19	-	2798	10	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	-1	264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	137.875144807016	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCACTGAATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	32689721	32649957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32678998_32679939_32680039_32684234_32684410_32689665
tx.15027	chr19	-	2458	6	ISM	ENSMUSG00000033610.17	ENSMUST00000112460.3	2760	7	36882	-4	36814	4	3prime_fragment	FALSE	canonical	3	103	junction_2	13.4966662550424	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGTACATGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	34818435	34788289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156
tx.15028	chr19	+	1432	8	ISM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	2206	-26	2206	14	3prime_fragment	FALSE	canonical	3	71	junction_7	21.0092302358283	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTGTACAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	36389353	36433618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
tx.15029	chr19	-	1833	4	ISM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	25045	8	25045	-8	3prime_fragment	FALSE	canonical	3	233	junction_1	22.8813364023074	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTACTTCCTAGTCTT	6470	False	NA	NA	False	NA	NA	NA	38782636	38776579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548
tx.1503	chr11	-	1764	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	70	1189	-30	-153	multi-exon	TRUE	canonical	3	225	junction_2	27.6394193137265	137	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	23447960	23439735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
tx.15030	chr19	-	2550	22	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	18.3974759187614	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCCAGTCTTTACCC	9866	False	NA	NA	False	NA	NA	NA	40502217	40283198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
tx.15031	chr19	-	2162	9	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-19181	-5	intron_retention	FALSE	canonical	2	12	junction_8	19.94993734326	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTAAGTCTTCCAGCCT	2510	False	NA	NA	False	NA	NA	NA	42295574	42271478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42295464
tx.15032	chr19	-	3364	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	103	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_20	73.0809653740288	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	NA	False	NA	NA	NA	44095618	44061773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095546
tx.15033	chr19	-	3414	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	88	0	77	0	multi-exon	FALSE	canonical	3	185	junction_2	31.5901883501824	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	NA	False	NA	NA	NA	44095831	44061773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
tx.15034	chr19	+	1228	5	NNC	ENSMUSG00000025226.12	novel	1243	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.9772492000501	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	6320	False	NA	NA	False	NA	NA	NA	46316629	46318884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_46316730_46316841_46316966_46317113_46317268_46317526_46318033_46318540
tx.15035	chr19	+	2131	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	38	2353	16	403	multi-exon	FALSE	canonical	3	63	junction_6	14.4473967456865	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATTGTCCTTTAGACAA	NA	False	NA	NA	False	NA	NA	NA	46385372	46474890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
tx.15036	chr19	+	1709	11	NIC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	53.7699730332832	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGATACCACAATGGAT	5968	False	NA	NA	False	NA	NA	NA	46695890	46729523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698101_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
tx.15037	chr19	+	1461	7	ISM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	36531	719	1149	-105	3prime_fragment	FALSE	canonical	3	251	junction_3	18.5060050314005	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	47115737	47119585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
tx.15038	chr19	-	1468	8	ISM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	8417	12	7560	-7	3prime_fragment	FALSE	canonical	3	124	junction_2	7.9256751466744	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGCATTTCAATTCATT	NA	False	NA	NA	False	NA	NA	NA	47517141	47489483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075
tx.15039	chr19	-	796	2	FSM	ENSMUSG00000042694.18	ENSMUST00000182714.2	690	2	-52	-54	-4	54	multi-exon	FALSE	canonical	3	136	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTAAGGTATTCCATA	NA	False	NA	NA	False	NA	NA	NA	47525537	47524299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_47524811_47525252
tx.1504	chr11	-	848	2	ISM	ENSMUSG00000020283.6	ENSMUST00000130811.2	367	3	14844	-634	14665	634	3prime_fragment	FALSE	canonical	3	429	junction_1	0	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCAGTGTTGAATTT	NA	False	NA	NA	False	NA	NA	NA	23601008	23598821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_23599591_23600929
tx.15040	chr19	-	2267	11	FSM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	4	-8	0	8	multi-exon	FALSE	canonical	3	26	junction_10	157.939355450122	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTTTCACCAAAAAGCAT	7445	False	NA	NA	False	NA	NA	NA	55304458	55286743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
tx.15041	chr19	+	728	5	NNC	ENSMUSG00000025086.14	novel	2513	6	NA	NA	-1	-9808	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	89.3602260516389	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAGATGTTGGATTAT	NA	False	NA	NA	False	NA	NA	NA	57441364	57462250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57462023
tx.15042	chr19	+	1331	8	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	-1	19	intron_retention	FALSE	canonical	2	13	junction_5	11.9608203936768	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGATCTGCCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	58500451	58541536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
tx.15043	chr19	+	2320	9	NNC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	-27	5	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	126.932006897394	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTACTTGATGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	60799995	60824670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810777_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
tx.15044	chr19	-	1012	5	NNC	ENSMUSG00000063698.10	novel	1218	13	NA	NA	9843	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.7204227340122	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTGAAAGAAATCATCAA	NA	False	NA	NA	False	NA	NA	NA	60840019	60827198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60839617
tx.15045	chr19	-	1505	2	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGTCTGAGGCATTG	NA	False	NA	NA	False	NA	NA	NA	61301957	61291315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr19_-_61292709_61301845
tx.15046	chr1_GL456210v1_random	-	1424	3	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCTAATATTTAATATTC	NA	False	NA	NA	False	NA	NA	NA	113811	111432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_GL456210v1_random_-_112591_112852_113004_113696
tx.15047	chr2	+	2652	6	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	243	363	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	229.161602368285	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGGACTTGCTTCTA	4335	False	NA	NA	False	NA	NA	NA	4886617	4913311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_4886672_4889142_4889417_4901499_4901591_4904274_4904375_4910282_4910496_4911391
tx.15048	chr2	-	2376	9	ISM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	17623	5382	-9118	-4725	internal_fragment	FALSE	canonical	3	118	junction_2	15.4591194768654	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGATTGGGTTCATTA	NA	False	NA	NA	False	NA	NA	NA	5051126	5030836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
tx.15049	chr2	-	1119	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-22	2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	320.411692814981	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTACTGTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	5849774	5799473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_5799692_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
tx.1505	chr11	-	1751	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	52	2343	52	634	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCAGTGTTGAATTT	NA	False	NA	NA	False	NA	NA	NA	23615907	23598821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
tx.15050	chr2	-	2098	12	NIC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	-1	-1738	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	13.1840123565697	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTTGATGATTGATTC	9028	False	NA	NA	False	NA	NA	NA	13549480	13515562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13529761_13529809_13530428_13530506_13538194_13538305_13549379
tx.15051	chr2	+	3030	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-546	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	14.5140677711421	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGGTTCAAATGTTC	3799	False	NA	NA	False	NA	NA	NA	16360568	16756500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_16360983_16361295_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
tx.15052	chr2	+	1885	6	ISM	ENSMUSG00000036617.18	ENSMUST00000114604.9	4786	18	-158	65613	-158	286	5prime_fragment	FALSE	canonical	3	184	junction_4	5.56417109729742	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGACAGAGAAACCAGG	4638	False	NA	NA	False	NA	NA	NA	20524443	20749083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269
tx.15053	chr2	-	1500	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	24.8445164976097	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9372	False	NA	NA	False	NA	NA	NA	24825209	24815363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24825039
tx.15054	chr2	-	3414	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	104	-263	-11	263	multi-exon	FALSE	canonical	3	13	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGTTAATGGTAAAT	8366	False	NA	NA	False	NA	NA	NA	25086794	25082714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25085938_25086603
tx.15055	chr2	+	1699	2	NNC	ENSMUSG00000044628.6	novel	1137	2	NA	NA	-624	0	intron_retention	FALSE	canonical	3	42	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTGTTCACTGATTGA	NA	False	NA	NA	False	NA	NA	NA	25132316	25134273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_25132536_25132793
tx.15056	chr2	+	1933	9	FSM	ENSMUSG00000015085.9	ENSMUST00000028328.3	1935	9	-3	5	-3	-5	multi-exon	FALSE	canonical	1	2	junction_1	1.69096865730859	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGTGAAGTGTCCATAG	NA	False	NA	NA	False	NA	NA	NA	25285882	25291328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_25286102_25287407_25287526_25288012_25288164_25288302_25288463_25288543_25288772_25289293_25289549_25289628_25289749_25290575_25290711_25290781
tx.15057	chr2	-	3438	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	63	5	-36	-5	multi-exon	FALSE	canonical	3	168	junction_1	2.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	26800626	26795278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26798314_26799004_26799086_26800304
tx.15058	chr2	+	1852	9	NIC	ENSMUSG00000015846.16	novel	673	4	NA	NA	49	14	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	28.6879765755621	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGAGATATCACTCCA	5064	False	NA	NA	False	NA	NA	NA	27630261	27650209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_27630495_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
tx.15059	chr2	+	1645	10	ISM	ENSMUSG00000026812.17	ENSMUST00000156857.8	1711	11	18	227	3	-227	5prime_fragment	FALSE	canonical	3	29	junction_1	12.154357040244	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAAAGAAAAGG	3461	False	NA	NA	False	NA	NA	NA	28531257	28562292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
tx.1506	chr11	+	3378	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	181	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	23616187	23682876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
tx.15060	chr2	+	747	3	ISM	ENSMUSG00000057738.15	ENSMUST00000129241.3	7585	57	52101	-267	172	0	3prime_fragment	TRUE	canonical	3	542	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	6045	False	NA	NA	False	NA	NA	NA	29920492	29921463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_29920611_29920686_29920835_29920982
tx.15061	chr2	-	1643	11	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	105.548519648548	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	NA	False	NA	NA	NA	30249283	30234820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_30235440_30235710_30235830_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.15062	chr2	+	922	4	NNC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	14	548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	246.72251619988	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGAGTACTTGCAAATC	NA	False	NA	NA	False	NA	NA	NA	30697982	30711201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_30698096_30709640_30709845_30710460_30710629_30710764
tx.15063	chr2	+	1562	3	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	-568	-941	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	4.5	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCTTGTACTGTGACAC	7632	False	NA	NA	False	NA	NA	NA	30909262	30912653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_30909404_30909796_30909900_30911335
tx.15064	chr2	+	1573	10	NIC	ENSMUSG00000046854.17	novel	1794	11	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	2.21108319357027	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACGAAATGGAGGTTCA	9758	False	NA	NA	False	NA	NA	NA	32465854	32473789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_32466033_32466662_32466864_32467883_32467938_32468120_32468276_32468491_32468617_32468947_32468983_32469069_32469126_32469952_32470066_32470290_32470442_32473284
tx.15065	chr2	+	2067	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	0	-4	0	0	multi-exon	FALSE	canonical	3	40	junction_1	98.788775790685	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	NA	False	NA	NA	NA	32515448	32525070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
tx.15066	chr2	+	1150	4	FSM	ENSMUSG00000053746.9	ENSMUST00000138214.2	908	4	-94	-148	-15	0	multi-exon	FALSE	canonical	3	42	junction_3	3.85861230093008	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGCTTCCTGTGGGGT	8176	False	NA	NA	False	NA	NA	NA	32665782	32667609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32665908_32666315_32666819_32666994_32667041_32667133
tx.15067	chr2	+	3024	10	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	57.8179347628996	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	NA	NA	NA	34296864	34514962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_34297267_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
tx.15068	chr2	+	2196	10	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	20241	726	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	91.2068602574647	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTTCATTTACTTT	NA	False	NA	NA	False	NA	NA	NA	38424878	38476504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_38425002_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
tx.15069	chr2	+	377	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1280	329	multi-exon	TRUE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATTGAAGAAGATC	NA	False	NA	NA	False	NA	NA	NA	40447043	40447457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr2_+_40447305_40447341
tx.1507	chr11	+	1655	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1067	2	0	-2	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	222	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTCTAGTCATTAACAC	NA	False	NA	NA	False	NA	NA	NA	26337201	26421874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
tx.15070	chr2	+	2684	9	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	81072	34331	-209	4863	internal_fragment	FALSE	canonical	3	18	junction_8	5.02493781056044	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGATGTTATTATTTCA	NA	False	NA	NA	False	NA	NA	NA	49590381	49630459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094
tx.15071	chr2	+	4177	7	ISM	ENSMUSG00000036202.17	ENSMUST00000112693.10	8509	36	37986	2	-166	0	3prime_fragment	FALSE	canonical	3	521	junction_3	89.7100266909384	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	52000829	52012393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
tx.15072	chr2	-	3254	9	ISM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	45368	-1399	-607	1399	3prime_fragment	FALSE	canonical	3	580	junction_8	46.1302503786832	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATTGTCTTGTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	53035928	53026850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835
tx.15073	chr2	+	2625	9	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	-6	2067	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_8	20.2727495668447	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATATTGTGAAATTATT	NA	False	NA	NA	False	NA	NA	NA	68691778	68903952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68902373
tx.15074	chr2	+	384	2	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	3818	False	NA	NA	False	NA	NA	NA	69673981	69676544	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_69674115_69676293
tx.15075	chr2	-	4038	21	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_18	66.7850844126142	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	NA	NA	NA	70655761	70542750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
tx.15076	chr2	-	3271	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	-18	68	-18	-18	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAATATAATCTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	74409310	74350702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
tx.15077	chr2	+	1417	5	FSM	ENSMUSG00000002111.9	ENSMUST00000002180.8	2034	5	618	-1	-66	1	multi-exon	FALSE	canonical	3	17	junction_1	7.28010988928052	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGTGTCTCATTCAAGA	9235	False	NA	NA	False	NA	NA	NA	90927058	90946102	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_90927339_90929774_90929872_90943599_90943791_90944589_90944756_90945419
tx.15079	chr2	+	2824	13	ISM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	1887	1	0	-1	3prime_fragment	FALSE	canonical	3	316	junction_1	27.1625763791941	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	91482091	91502670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
tx.1508	chr11	-	1823	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-25	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	30.8175635348128	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTTAAGCATTCCATC	NA	False	NA	NA	False	NA	NA	NA	26543647	26421400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543385
tx.15080	chr2	+	1459	2	ISM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	1698	-21	425	21	3prime_fragment	FALSE	canonical	3	102	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGACTGCTCTTGTGG	5140	False	NA	NA	False	NA	NA	NA	91542964	91551911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_91543211_91550698
tx.15081	chr2	+	1479	6	NNC	ENSMUSG00000032679.13	novel	681	5	NA	NA	0	-353	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	100.476066802	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGGAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103926184	103945341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_103926273_103928069_103928190_103928356_103928422_103934515_103934595_103941084_103941190_103944319
tx.15082	chr2	+	1149	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	-23	-2804	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	161.88984213858	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTATAGTGCATTC	NA	False	NA	NA	False	NA	NA	NA	112209532	112241781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112241683
tx.15083	chr2	+	580	3	FSM	ENSMUSG00000085316.2	ENSMUST00000126467.2	1710	3	-90	1220	-90	-1057	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTCCCACTCGGTTTA	NA	False	NA	NA	False	NA	NA	NA	116730542	116742052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_116730813_116741201_116741318_116741858
tx.15084	chr2	+	1643	11	NNC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	37.1619428986161	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGTTTTTTCTGTCC	280	False	NA	NA	False	NA	NA	NA	119039483	119047531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045311_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
tx.15085	chr2	+	1192	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	59.4635742843185	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTTCTCATGTTCCCC	NA	False	NA	143	True	NA	NA	NA	119857984	119863077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862321_119862482_119862594
tx.15086	chr2	-	1797	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	164	0	-1	0	multi-exon	FALSE	canonical	3	29	junction_5	57.8321709777525	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	NA	NA	NA	120439837	120434718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
tx.15087	chr2	-	1503	7	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	5.52016505389306	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGGTAAGTTCAAGT	NA	False	NA	NA	False	NA	NA	NA	121244230	121224835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_121224969_121227433_121227602_121227941_121228370_121236809_121236935_121240857_121241032_121242630_121242772_121243896
tx.15088	chr2	-	1708	11	NNC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	25.4943130913543	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCGATCATTAGCCT	NA	False	NA	NA	False	NA	NA	NA	121273096	121269505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_121270049_121270107_121270153_121270328_121270501_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
tx.15089	chr2	+	1205	4	ISM	ENSMUSG00000027242.15	ENSMUST00000132373.2	3155	9	-36	13368	-4	-12792	5prime_fragment	FALSE	canonical	3	43	junction_1	5.73488351136175	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAAGGTAGAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	121337199	121350478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898
tx.1509	chr11	-	1637	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	255	-3	-43	3	multi-exon	FALSE	canonical	3	73	junction_12	13.1368332899862	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTTAAGCATTCCATC	NA	False	NA	NA	False	NA	NA	NA	26543665	26421400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
tx.15090	chr2	-	2652	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	-38	-1	4	1	multi-exon	FALSE	canonical	3	55	junction_3	121.804595048791	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	NA	False	NA	NA	NA	126517460	126470831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
tx.15091	chr2	-	1429	6	ISM	ENSMUSG00000027364.15	ENSMUST00000028842.9	1361	7	2951	-370	2945	-1	3prime_fragment	FALSE	canonical	2	5	junction_2	2.41660919471891	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTCAGTGGCAGAGTG	NA	False	NA	NA	False	NA	NA	NA	126622413	126602970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_126603612_126611790_126611924_126617643_126617787_126619818_126620029_126621850_126622047_126622307
tx.15092	chr2	+	4509	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	-41	343	-41	-343	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTAGTCTTCCTGTGCC	2293	False	NA	NA	False	NA	NA	NA	127089786	127102684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
tx.15093	chr2	-	3010	6	FSM	ENSMUSG00000034800.16	ENSMUST00000110368.9	2981	6	-29	0	-21	0	multi-exon	FALSE	canonical	1	3	junction_5	12.1983605455815	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAGTGTCTCTATTCA	NA	False	NA	NA	False	NA	NA	NA	127426618	127417452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127423996_127426549
tx.15094	chr2	+	1868	6	ISM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	3	6499	3	3	5prime_fragment	FALSE	canonical	3	70	junction_4	9.64157663455516	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTCAGTCCTCCATC	NA	False	NA	NA	False	NA	NA	NA	128907864	128931704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913
tx.15095	chr2	+	1952	4	ISM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	18083	-1	424	1	3prime_fragment	FALSE	canonical	3	289	junction_2	22.3954360429878	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	128960997	128968515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_128961117_128964989_128965187_128965630_128965885_128967133
tx.15096	chr2	-	2513	8	FSM	ENSMUSG00000037773.15	ENSMUST00000110277.2	1689	8	-85	-739	-71	5	multi-exon	FALSE	canonical	0	0	junction_7	13.0868371321129	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGTTTGTTTTTA	7563	False	NA	NA	False	NA	NA	NA	130266692	130260139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331_130265473_130266412
tx.15097	chr2	-	2993	2	FSM	ENSMUSG00000079043.4	ENSMUST00000110262.3	3015	2	17	5	17	-5	multi-exon	FALSE	canonical	3	43	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATCCACAAAGTCTTAC	NA	False	NA	NA	False	NA	NA	NA	130471930	130455764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130458663_130471835
tx.15098	chr2	+	2277	6	FSM	ENSMUSG00000027333.19	ENSMUST00000151627.8	2223	6	-57	3	-37	2	multi-exon	FALSE	canonical	3	113	junction_5	11.7234807118023	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	131333805	131367089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131363092_131363978_131364140_131366662
tx.15099	chr2	+	1708	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110180.2	1617	8	-86	-5	-16	0	multi-exon	FALSE	canonical	3	8	junction_5	45.6709616134134	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	NA	False	NA	NA	NA	131333826	131367092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131362567_131362974_131363092_131363978_131364140_131366662
tx.151	chr1	-	2263	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	160	0	160	0	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	173	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4615	False	NA	NA	False	NA	NA	NA	55127023	55116993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
tx.1510	chr11	+	2070	11	FSM	ENSMUSG00000020467.16	ENSMUST00000020759.12	2037	11	-33	0	-33	0	multi-exon	FALSE	canonical	0	0	junction_10	1.00498756211209	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCATGTTTGTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	28803170	28876743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_28803325_28804464_28804555_28817465_28817515_28817652_28818040_28860609_28860733_28864587_28864708_28865660_28865781_28866849_28866970_28871402_28871527_28871610_28871807_28876156
tx.15101	chr2	+	453	2	Antisense	novelGene_ENSMUSG00000074758.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	283	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	1069	False	NA	NA	False	NA	NA	NA	143991091	143998264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_+_143991331_143998050
tx.15102	chr2	+	3750	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	28	23	12	-22	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGGGCTGCAGCCTAG	NA	False	NA	NA	False	NA	NA	NA	144210930	144249573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
tx.15103	chr2	+	3874	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	27	8	27	-8	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCACTGTGGTATCTG	NA	False	NA	NA	False	NA	NA	NA	150628681	150673670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
tx.15105	chr2	+	2921	2	ISM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	50153	5	50079	-5	3prime_fragment	FALSE	canonical	3	126	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTCCATGCAGCCTG	8077	False	NA	NA	False	NA	NA	NA	152118911	152123767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_152118954_152120888
tx.15107	chr2	+	1280	8	FSM	ENSMUSG00000038241.17	ENSMUST00000109618.2	1254	8	-22	-4	0	4	multi-exon	FALSE	canonical	3	36	junction_1	9.61291648072041	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTAACTCATTCATTTA	NA	False	NA	NA	False	NA	NA	NA	155798491	155809718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477
tx.15108	chr2	+	2789	5	NIC	ENSMUSG00000027628.11	novel	2766	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	64.3481740222673	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTGTGTGAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	156389515	156410078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_156389804_156391771_156391948_156392568_156393370_156397746_156397977_156408784
tx.15109	chr2	+	3621	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	-4	887	-4	-887	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	157870412	157919240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
tx.1511	chr11	+	2558	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-2	151	-2	-3	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	NA	False	NA	NA	NA	29080745	29111677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
tx.15110	chr2	+	350	3	NNC	ENSMUSG00000074593.12	novel	443	4	NA	NA	1253	18	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	2	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTCATTTCCTTGCC	737	False	NA	NA	False	NA	NA	NA	164558477	164560006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_164558546_164558914_164559085_164559894
tx.15111	chr2	-	1509	7	NNC	ENSMUSG00000053166.15	novel	3702	12	NA	NA	37576	-1353	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	6.90410505906933	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGGAGTTTGAGGTTCT	NA	False	NA	NA	False	NA	NA	NA	164985803	164955599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_164955984_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561
tx.15112	chr2	-	1152	9	NNC	ENSMUSG00000017670.17	novel	639	6	NA	NA	0	1229	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	114.629225658206	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTTAAAAGCTCCACAG	NA	False	NA	NA	False	NA	NA	NA	165168399	165149603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_165149982_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
tx.15113	chr2	-	1932	9	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	6066	5	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	171.281885717667	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGTTGTGTTTAATTTA	NA	False	NA	NA	False	NA	NA	NA	165687976	165669043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_165669638_165669852_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940
tx.15114	chr2	-	2267	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	164.953988074912	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTTGCTCTCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	165740903	165669104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_165669638_165669852_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
tx.15115	chr2	+	1202	4	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	84655	2691	62586	-2691	3prime_fragment	FALSE	canonical	3	194	junction_1	17.0163320241336	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTTAGTAGACTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	166732162	166737281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_166732358_166733686_166733826_166735420_166735539_166736531
tx.15116	chr2	+	669	4	Antisense	novelGene_ENSMUSG00000017969.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_2	1.24721912892465	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	46	False	NA	NA	False	NA	NA	NA	167062880	167065658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_+_167063236_167063338_167063420_167065106_167065243_167065561
tx.15117	chr2	+	447	2	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGTCCCGTGAGAGT	NA	False	NA	NA	False	NA	NA	NA	168847931	168878546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_168848074_168878241
tx.15118	chr2	-	899	2	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	NA	False	NA	NA	NA	170537924	170533574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_-_170534117_170537567
tx.1512	chr11	+	4360	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	-26	791	-26	-791	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGCTTCTGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	29122863	29170006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
tx.15120	chr2	+	572	2	ISM	ENSMUSG00000027523.21	ENSMUST00000238267.2	1071	7	1672	0	1339	0	3prime_fragment	FALSE	canonical	3	915	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	174187781	174188537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_174187851_174188034
tx.15121	chr2	-	3412	4	NNC	ENSMUSG00000078902.4	novel	1436	3	NA	NA	11	10128	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	59.0160053620108	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAAAAATGAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	175017653	174997919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_175001033_175013387_175013449_175013640_175013768_175017542
tx.15122	chr2	+	596	3	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	32	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGGTAATGACCCTT	NA	False	NA	NA	False	NA	NA	NA	179056723	179058676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_179056894_179057552_179057714_179058411
tx.15123	chr2	+	1618	7	NNC	ENSMUSG00000038840.8	novel	1178	7	NA	NA	-433	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	5.87839736284947	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCAGCTAGGCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	180570382	180575803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_180571307_180572597_180572698_180573051_180573131_180573211_180573258_180574711_180574784_180574922_180575129_180575612
tx.15124	chr3	-	1467	6	ISM	ENSMUSG00000039795.15	ENSMUST00000108377.8	936	8	-10	3222	-6	817	5prime_fragment	FALSE	canonical	3	548	junction_1	96.3327566303384	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATATATGTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	10416383	10408900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
tx.15125	chr3	+	3768	17	ISM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	17040	-2	16560	2	3prime_fragment	FALSE	canonical	3	160	junction_4	31.8658687901334	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCACTTAGTGACTGT	NA	False	NA	NA	False	NA	NA	NA	20129014	20172656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
tx.15126	chr3	+	4128	4	ISM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	39804	0	34328	0	3prime_fragment	FALSE	canonical	3	107	junction_2	11.5854314646552	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTCTGGCCCTTCCC	NA	False	NA	NA	False	NA	NA	NA	27276917	27299107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_27277046_27280221_27280292_27293680_27293853_27295349
tx.15127	chr3	+	3418	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-14	70	-1	63	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGCTAATCTTTTTCT	8778	False	NA	NA	False	NA	NA	NA	30656778	30672580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
tx.15128	chr3	+	2246	4	ISM	ENSMUSG00000051860.14	ENSMUST00000172593.2	1511	8	5616	-1679	439	0	3prime_fragment	FALSE	canonical	2	5	junction_3	2.44948974278318	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCTCTTCTCTCTTT	971	False	NA	NA	False	NA	NA	NA	30810809	30821323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_30810898_30812474_30812594_30816287_30816399_30819395
tx.15129	chr3	+	2128	5	NIC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	102.806857747915	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30910098	30951339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_30910207_30931383_30931711_30944090_30944191_30948277_30948390_30949858
tx.1513	chr11	+	2343	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	67	0	67	0	multi-exon	FALSE	canonical	3	259	junction_3	30.8097333552481	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTTATTCTTACTT	NA	False	NA	NA	False	NA	NA	NA	29122956	29159641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
tx.15130	chr3	-	1873	12	NIC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	37	351	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	8.60616730621008	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCTTCCTAATGAAATA	NA	False	NA	NA	False	NA	NA	NA	40801200	40773591	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789741_40791523_40791568_40793848_40793941_40801075
tx.15131	chr3	+	2508	13	FSM	ENSMUSG00000037818.17	ENSMUST00000108077.10	3277	13	-62	831	-3	-1	multi-exon	FALSE	non_canonical	0	0	junction_6	7.57554545157567	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGGTGGGTTCTGTCAG	NA	False	NA	NA	False	NA	NA	NA	40848694	40890741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
tx.15132	chr3	-	1582	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	257	1168	257	1026	multi-exon	FALSE	canonical	3	569	junction_2	17	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCGAGTCGGACTCTA	NA	False	NA	NA	False	NA	NA	NA	41037224	41021928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_41023160_41024714_41024871_41037029
tx.15133	chr3	+	2970	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	196	326	196	-326	multi-exon	FALSE	canonical	3	63	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCGTTTCTTTCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	51391582	51403327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_51392002_51400776
tx.15134	chr3	+	906	2	ISM	ENSMUSG00000027751.14	ENSMUST00000199655.5	836	9	-12	12915	0	-1385	5prime_fragment	FALSE	canonical	3	325	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAAAAGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	54600243	54601392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_54600281_54600523
tx.15135	chr3	+	1499	5	ISM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	26690	3639	26690	-3639	3prime_fragment	FALSE	canonical	2	9	junction_1	3.04138126514911	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTTTATATCACCGTTT	NA	False	NA	NA	False	NA	NA	NA	54689692	54705039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_54690194_54693484_54693743_54696606_54696829_54701652_54701910_54704778
tx.15136	chr3	-	742	2	ISM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	113309	2670	113227	-2670	3prime_fragment	FALSE	canonical	3	225	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGTATAGATAGTAATT	NA	False	NA	NA	False	NA	NA	NA	57370022	57365872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_57366532_57369939
tx.15137	chr3	+	2275	10	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	-288	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	45.5520323840878	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATTGTTCTGGTGAA	NA	False	NA	NA	False	NA	NA	NA	57643495	57742252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
tx.15138	chr3	+	4050	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	542	4825	542	2878	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGCTAGTTCCTGAGA	2316	False	NA	NA	False	NA	NA	NA	69224735	69463310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
tx.15139	chr3	-	733	5	NNC	ENSMUSG00000034151.14	novel	2467	17	NA	NA	76410	12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1.92028643696715	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGAGTATCAATGACTC	NA	False	NA	NA	False	NA	NA	NA	74974600	74945201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_74945397_74947190_74947327_74959679_74959938_74968839_74968963_74974579
tx.1514	chr11	-	1560	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	99	5	-22	-5	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTTTGGATGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	29197310	29171536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
tx.15140	chr3	-	1117	3	FSM	ENSMUSG00000034109.16	ENSMUST00000125405.2	817	3	-304	4	-5	-4	multi-exon	FALSE	canonical	3	30	junction_2	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	75864261	75817166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_75817366_75818881_75818957_75863418
tx.15142	chr3	+	4404	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	88	0	88	0	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	9482	False	NA	NA	False	NA	NA	NA	88523537	88555359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.15143	chr3	+	4233	22	FSM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	156	1	12	1	multi-exon	FALSE	canonical	3	33	junction_1	68.5955314781911	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTGGAAATGAAGCGC	NA	False	NA	NA	False	NA	NA	NA	88528754	88555356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
tx.15144	chr3	+	2555	10	FSM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	-42	-125	-12	125	multi-exon	FALSE	canonical	3	344	junction_7	30.6195289897731	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATCTGGGTGTGGTGGC	-4	True	NA	NA	False	NA	NA	NA	88593097	88609045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567
tx.15145	chr3	+	2875	14	FSM	ENSMUSG00000028060.15	ENSMUST00000198042.5	2567	14	-16	-292	-3	0	multi-exon	FALSE	canonical	3	104	junction_11	80.4603618093109	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	16	False	NA	NA	False	NA	NA	NA	88593117	88620161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
tx.15146	chr3	+	2008	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	104	0	-35	0	multi-exon	FALSE	canonical	3	250	junction_3	89.4627094877463	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	89072250	89084228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
tx.15147	chr3	+	1809	6	ISM	ENSMUSG00000032657.16	ENSMUST00000147696.8	2977	11	2260	0	1235	0	3prime_fragment	FALSE	canonical	1	1	junction_1	10.998181667894	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	3984	False	NA	NA	False	NA	NA	NA	89092770	89096596	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_89092917_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
tx.15148	chr3	+	1429	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	29	26519	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	236.773098134057	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGTGGCTGTGTTGTC	169	False	NA	NA	False	NA	NA	NA	89366453	89402839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402075
tx.15149	chr3	+	2285	10	FSM	ENSMUSG00000027936.19	ENSMUST00000136970.8	2214	10	-66	-5	-21	0	multi-exon	TRUE	canonical	3	9	junction_1	29.0814097846327	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	NA	NA	NA	90161581	90171432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_90161866_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
tx.1515	chr11	-	913	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	5	0	3	0	multi-exon	FALSE	canonical	3	382	junction_1	0	261	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTGTCTTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	29465028	29462875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_29463677_29464916
tx.15150	chr3	+	1299	6	FSM	ENSMUSG00000028148.12	ENSMUST00000029794.11	1251	6	-48	0	-48	0	multi-exon	FALSE	canonical	0	0	junction_3	1.01980390271856	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTAGTTGATTCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	94249357	94254659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_94249689_94250561_94250764_94251715_94251855_94253455_94253567_94253854_94253980_94254268
tx.15151	chr3	+	4306	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	19	0	5	0	multi-exon	FALSE	canonical	0	0	junction_10	84.9941174435031	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	NA	NA	NA	95341719	95404551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
tx.15152	chr3	+	1690	15	NIC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-46	188	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	83.0812240877466	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATAGTGTGTTATTAACA	NA	False	NA	NA	False	NA	NA	NA	95466941	95495170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_95467035_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
tx.15153	chr3	+	1518	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_2	105.267194425529	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	NA	NA	NA	95466975	95494907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
tx.15154	chr3	+	4867	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	101	38	99	-38	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAACACTGTTTAATAAAA	NA	False	NA	NA	False	NA	NA	NA	97565628	97581090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
tx.15155	chr3	-	3009	19	ISM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	12799	4	-2846	-4	3prime_fragment	FALSE	canonical	3	297	junction_17	47.5412751144327	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	101499201	101483538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096
tx.15156	chr3	+	1953	11	ISM	ENSMUSG00000058388.15	ENSMUST00000090685.11	3006	18	22624	0	-5350	0	3prime_fragment	FALSE	canonical	3	60	junction_5	14.324803663576	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	103898385	103914806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
tx.15157	chr3	+	1355	7	ISM	ENSMUSG00000058388.15	ENSMUST00000090685.11	3006	18	29005	0	1031	0	3prime_fragment	FALSE	canonical	3	60	junction_1	15.8078742685058	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	2951	False	NA	NA	False	NA	NA	NA	103904766	103914806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
tx.15158	chr3	+	1870	9	ISM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	3	0	3	0	intron_retention	TRUE	canonical	3	56	junction_1	13.9977676791694	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	NA	NA	NA	104688374	104693334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713
tx.15159	chr3	-	2152	2	ISM	ENSMUSG00000027905.16	ENSMUST00000132008.2	2257	7	-7	3421	1	-3421	5prime_fragment	FALSE	canonical	3	347	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCCACTCCC	NA	False	NA	NA	False	NA	NA	NA	105594767	105592225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_105594050_105594439
tx.1516	chr11	+	2635	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	-37	-173	3	173	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	NA	False	NA	NA	NA	29476410	29495452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
tx.15160	chr3	+	1692	8	ISM	ENSMUSG00000009108.16	ENSMUST00000058669.15	2054	9	462	0	59	0	3prime_fragment	FALSE	canonical	2	2	junction_6	1.66598625567009	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGGTTCCCTGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	108000566	108008748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_108000683_108002456_108002500_108002754_108002897_108003665_108003824_108005282_108005412_108005626_108005757_108007303_108007458_108007928
tx.15161	chr3	-	3062	2	FSM	ENSMUSG00000049300.12	ENSMUST00000168412.3	3059	2	4	-7	-1	7	multi-exon	FALSE	canonical	3	26	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTATTCTTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	110158310	110153417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_110155172_110157002
tx.15162	chr3	-	718	3	NNC	ENSMUSG00000054426.12	novel	739	3	NA	NA	29	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	22.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTATGGTGATT	973	False	NA	NA	False	NA	NA	NA	115681714	115675226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_115675488_115679862_115680030_115681424
tx.15163	chr3	+	2290	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	-14	128	-9	-113	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTGGATTGTATCAGAT	NA	False	NA	NA	False	NA	NA	NA	116388642	116422668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
tx.15164	chr3	-	3177	14	NIC	ENSMUSG00000028134.12	novel	3364	14	NA	NA	40	-162	combination_of_known_junctions	TRUE	canonical	3	6	junction_6	23.8597975856545	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACCTTTTCTGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	119576997	119512552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
tx.15165	chr3	-	1614	4	FSM	ENSMUSG00000028133.18	ENSMUST00000039761.12	1145	4	-1	-468	0	1	multi-exon	FALSE	canonical	3	76	junction_2	14.8548533034381	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTCTGAGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	120965344	120949045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_120949952_120950049_120950166_120952416_120952905_120965240
tx.15166	chr3	-	1458	2	ISM	ENSMUSG00000028127.11	ENSMUST00000197383.5	3156	19	53697	133	7383	0	3prime_fragment	FALSE	canonical	3	218	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGCCTGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	121555118	121552555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_121553959_121555063
tx.15167	chr3	-	2621	15	ISM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	35605	0	-10845	0	3prime_fragment	TRUE	canonical	3	145	junction_14	22.3132842284865	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGCCTGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	121573346	121552555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203
tx.15168	chr3	+	3096	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	215	0	170	0	multi-exon	TRUE	canonical	3	116	junction_1	21.0877740616698	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCTTTATTATTGA	NA	False	NA	NA	False	NA	NA	NA	122213641	122323840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
tx.15169	chr3	-	656	3	NNC	ENSMUSG00000105837.5	novel	655	3	NA	NA	-102	12	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTCTTGAAAATACTA	6859	False	NA	NA	False	NA	NA	NA	129325860	129321103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_129321464_129324707_129324814_129325670
tx.1517	chr11	+	2957	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	-12	-204	-2	173	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	NA	False	NA	NA	NA	29476444	29495452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
tx.15170	chr3	-	1522	4	ISM	ENSMUSG00000028018.16	ENSMUST00000161577.8	1975	10	-80	72965	-2	9433	5prime_fragment	FALSE	canonical	3	184	junction_1	16.8720676464584	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGCTAGTCAGGTCTT	NA	False	NA	NA	False	NA	NA	NA	132797588	132777556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_132777913_132787799_132788268_132790336_132790787_132797340
tx.15171	chr3	+	1981	13	FSM	ENSMUSG00000037994.15	ENSMUST00000051849.10	4818	13	-10	2847	4	5	multi-exon	FALSE	canonical	0	0	junction_3	1.55232800084976	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATACATTTCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	135013495	135048301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_135013543_135022814_135022955_135024040_135024222_135027646_135027818_135029389_135029533_135030269_135030398_135031854_135032031_135034752_135034860_135035528_135035679_135036343_135036453_135038176_135038314_135042114_135042336_135048030
tx.15172	chr3	-	2037	3	ISM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	129308	-5	38775	1	3prime_fragment	FALSE	canonical	3	85	junction_1	7	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	138651523	138631665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_138633474_138647490_138647620_138651423
tx.15173	chr3	-	2017	13	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	15	433	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	45.7355775688419	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTAAGTAGAAATCTAAAT	7018	False	NA	NA	False	NA	NA	NA	142101439	141948007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142017976_142020166_142020210_142058494_142058647_142097473_142097612_142101346
tx.15174	chr3	-	2398	6	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	20375	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	5.74804314527997	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTATTTCCTTAATCT	NA	False	NA	NA	False	NA	NA	NA	144534743	144528383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672_144533898_144534158
tx.15175	chr3	+	1056	2	ISM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	1032	-2	-12	0	3prime_fragment	FALSE	canonical	3	242	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTTAGCATCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	145644828	145650584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_145644852_145649551
tx.15176	chr3	-	3476	4	FSM	ENSMUSG00000053870.8	ENSMUST00000066568.6	3518	4	40	2	5	-2	multi-exon	FALSE	canonical	3	25	junction_3	2.16024689946929	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGAAATTTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	154799000	154790556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798935
tx.15177	chr4	-	3230	19	FSM	ENSMUSG00000045205.17	ENSMUST00000084892.12	6754	19	0	3524	0	-3524	multi-exon	FALSE	canonical	3	48	junction_13	8.17176711475418	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTAAGCCAGTGTGGT	-10	True	NA	NA	False	NA	NA	NA	11322137	11264838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
tx.15178	chr4	+	481	2	ISM	ENSMUSG00000045751.17	ENSMUST00000154349.9	3603	19	95057	-1	21371	0	3prime_fragment	FALSE	canonical	3	239	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	NA	False	NA	NA	False	NA	NA	NA	24600218	24602950	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_24600323_24602573
tx.15179	chr4	-	3875	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	0	10	combination_of_known_junctions	TRUE	canonical	3	78	junction_1	36.6180404503927	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTATGTAATGCTTA	-6	True	NA	NA	False	NA	NA	NA	25281821	25248589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
tx.1518	chr11	-	618	5	FSM	ENSMUSG00000020460.16	ENSMUST00000102844.4	637	5	19	0	19	0	multi-exon	FALSE	canonical	0	0	junction_3	5966.04937856703	1888	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	NA	False	NA	NA	NA	29497841	29495845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680
tx.15180	chr4	-	2191	15	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	0	5647	0	-4105	5prime_fragment	FALSE	canonical	3	188	junction_2	18.7215089658709	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCACAGTCATTTTTTAAA	-6	True	NA	NA	False	NA	NA	NA	25281821	25254251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
tx.15181	chr4	-	2385	21	NNC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	207.784166865524	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	34614935	34570795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34610361_34610459_34611021_34611077_34614864
tx.15182	chr4	+	434	2	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGACCGCTGCTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	37224060	37225130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_37224096_37224731
tx.15183	chr4	+	2831	8	NNC	ENSMUSG00000028437.15	novel	3456	7	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	138.977314255065	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCTGCCTTAACCTC	24	False	NA	NA	False	NA	NA	NA	41349026	41389766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_41349232_41366889_41366931_41371724_41371850_41378459_41378625_41378946_41379871_41387174_41387358_41388095_41388198_41388680
tx.15184	chr4	+	1731	6	NIC	ENSMUSG00000028437.15	novel	3456	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	120.399335546339	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCTGCCTTAACCTC	-9	True	NA	NA	False	NA	NA	NA	41349037	41389766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_41349232_41366889_41366931_41371724_41371850_41387174_41387358_41388095_41388198_41388680
tx.15185	chr4	-	4197	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	158	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTTGTTTTCTTGCT	-16	True	NA	NA	False	NA	NA	NA	41503100	41495603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_41499691_41502990
tx.15186	chr4	+	2009	5	NNC	ENSMUSG00000028480.15	novel	2320	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	107.627540620419	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	-23	True	NA	NA	False	NA	NA	NA	43957683	43979118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_43957774_43968111_43968193_43968571_43968676_43970499_43970578_43977462
tx.15187	chr4	+	1209	7	ISM	ENSMUSG00000028318.15	ENSMUST00000054723.9	1235	11	7438	-248	-2471	0	3prime_fragment	FALSE	canonical	3	175	junction_6	9.53356643071673	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATCTCCCTCCTTTCAT	8025	False	NA	NA	False	NA	NA	NA	45026672	45032360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
tx.15188	chr4	-	1814	2	FSM	ENSMUSG00000045973.19	ENSMUST00000132815.3	1005	2	10	-819	10	819	multi-exon	FALSE	canonical	3	9	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	-6	True	NA	NA	False	NA	NA	NA	45408750	45398421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_45400180_45408694
tx.1519	chr11	-	582	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	209	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	2322	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	NA	False	NA	NA	NA	29497900	29495845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
tx.15190	chr4	-	2061	2	FSM	ENSMUSG00000039611.3	ENSMUST00000042750.3	2989	2	24	904	24	-904	multi-exon	FALSE	canonical	1	1	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTGGAGGTGGTGAT	24	False	NA	NA	False	NA	NA	NA	49597852	49585409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_49587242_49597623
tx.15191	chr4	-	1810	2	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAGAGAAAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	53947493	53945468	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_-_53947050_53947264
tx.15192	chr4	-	1484	11	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	13	-12617	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	95.5351244307558	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCATCTCAGAATTGGA	9	False	56802327	NA	False	NA	NA	NA	56802318	56789082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_56789436_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
tx.15194	chr4	+	4055	21	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	74.8175113192092	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	74170153	74324098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_74170324_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
tx.15195	chr4	+	2031	9	ISM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	93543	-1	82669	1	3prime_fragment	FALSE	canonical	3	245	junction_1	11.4503002144049	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	4062	False	NA	NA	False	NA	NA	NA	74263715	74324098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
tx.15196	chr4	-	2766	6	FSM	ENSMUSG00000008489.19	ENSMUST00000107110.8	3671	6	-3	908	-3	-902	multi-exon	FALSE	canonical	0	0	junction_5	41.6461282714252	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGTATAACCATAGGTT	NA	False	NA	NA	False	NA	NA	NA	91260274	91139907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
tx.15197	chr4	+	244	2	ISM	ENSMUSG00000085843.2	ENSMUST00000133455.2	2251	3	-10	2773	-10	-2773	5prime_fragment	FALSE	canonical	3	30	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTCTCTTACCTAGAAT	NA	False	NA	NA	False	NA	NA	NA	98681994	98684364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_98682120_98684245
tx.15198	chr4	+	2181	14	NIC	ENSMUSG00000073791.14	novel	2121	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	4.74933816628712	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGTCTTGTTAATTG	2018	False	NA	NA	False	NA	NA	NA	99717679	99769985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_99717792_99719626_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
tx.15199	chr4	-	3056	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	15	4898	15	-4898	multi-exon	TRUE	canonical	3	64	junction_5	8.06903804675625	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATTGCCTTGACAGGT	NA	False	NA	NA	False	NA	NA	NA	104967072	104891968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
tx.152	chr1	+	593	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	181	0	-1	0	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	6967	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACAGTCTTTGGTAATT	NA	False	NA	NA	False	NA	NA	NA	55127471	55130466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
tx.1520	chr11	+	1623	7	FSM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	150	0	150	0	multi-exon	FALSE	canonical	3	50	junction_1	322.410409605866	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29668712	29692916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_29668883_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
tx.15200	chr4	+	1895	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	302	998	-89	4	multi-exon	TRUE	canonical	3	121	junction_13	39.9235428457496	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTGGTTTATTTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	106768968	106905893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
tx.15201	chr4	-	1524	4	NNC	ENSMUSG00000028619.16	novel	389	4	NA	NA	-35	856	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	34.7211110933328	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTCATAGAGGAGGTGG	NA	False	NA	NA	False	NA	NA	NA	107035779	107021998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_107022887_107033670_107033822_107034761_107034902_107035434
tx.15202	chr4	+	885	4	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16169	-13502	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.6024689946929	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAACCAAGTGTTAAGC	NA	False	NA	NA	False	NA	NA	NA	109075512	109097518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109097142
tx.15203	chr4	+	5025	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	7	158	7	-158	multi-exon	TRUE	canonical	3	117	junction_16	21.9326225188771	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATATCATTTTGCATTG	NA	False	NA	NA	False	NA	NA	NA	109137471	109244856	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
tx.15204	chr4	+	2356	13	FSM	ENSMUSG00000034401.17	ENSMUST00000084354.4	2239	13	-164	47	3	3	multi-exon	FALSE	canonical	3	19	junction_11	28.7691964897643	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCTCTGGTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	111577237	111686334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663180_111679937_111680030_111685382
tx.15205	chr4	+	725	3	NIC	ENSMUSG00000085399.8	novel	1015	5	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTGTGTGCATGT	NA	False	NA	NA	False	NA	NA	NA	114766453	114779166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_114766856_114773385_114773508_114778965
tx.15206	chr4	+	2267	2	ISM	ENSMUSG00000034210.15	ENSMUST00000132306.2	2368	4	-46	12381	-10	-12381	5prime_fragment	FALSE	canonical	3	178	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCTTAGAGAAGTTAAGT	NA	False	NA	NA	False	NA	NA	NA	115594930	115598748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_115596038_115597588
tx.15207	chr4	-	1257	8	FSM	ENSMUSG00000028699.10	ENSMUST00000030465.10	1985	8	2	726	2	713	multi-exon	FALSE	canonical	0	0	junction_3	1.48461497791618	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTGGAGAGATGGGTC	NA	False	NA	NA	False	NA	NA	NA	116024795	116019791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_116020233_116020503_116020588_116020824_116020978_116021058_116021158_116021263_116021339_116021515_116021723_116024204_116024270_116024662
tx.1521	chr11	+	1454	6	ISM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	15069	0	-66	0	3prime_fragment	FALSE	canonical	3	887	junction_5	19.4874318472189	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29683631	29692916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
tx.15210	chr4	+	1295	7	FSM	ENSMUSG00000006390.16	ENSMUST00000102673.11	1248	7	-42	-5	-10	5	multi-exon	FALSE	canonical	0	0	junction_2	45.4376862673853	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTGTGTGTGTAAAT	NA	False	NA	NA	False	NA	NA	NA	118285279	118289815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_118285413_118287692_118287753_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
tx.15211	chr4	-	2688	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	-34	2	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_16	185.670099376472	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCTTTCTCTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	120427507	120397062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422518_120422637_120424446_120424625_120427347
tx.15213	chr4	+	2280	15	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	505	2	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_14	92.6910602650613	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAATTTGATGCCAGT	NA	False	NA	NA	False	NA	NA	NA	123177392	123192617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
tx.15214	chr4	+	1443	9	ISM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	9949	0	-2104	0	3prime_fragment	FALSE	canonical	3	344	junction_1	38.2424420637595	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCCAGTTTTATGTT	2922	False	NA	NA	False	NA	NA	NA	123186652	123192625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
tx.15215	chr4	+	1585	4	FSM	ENSMUSG00000028889.18	ENSMUST00000144851.3	724	4	-99	-762	-99	-2	multi-exon	FALSE	canonical	3	495	junction_1	37.6061460697879	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTAAATGGTTTATTT	2107	False	NA	NA	False	NA	NA	NA	124745044	124749033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_124745601_124745692_124745813_124747666_124747810_124748267
tx.15216	chr4	-	4353	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6787	False	NA	NA	False	NA	NA	NA	126096440	126057874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
tx.15217	chr4	-	2520	2	FSM	ENSMUSG00000043962.17	ENSMUST00000130477.2	578	2	-16	-1926	8	1926	multi-exon	FALSE	canonical	3	431	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTTATCAGACCCTTAA	6795	False	NA	NA	False	NA	NA	NA	126096432	126077931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_126080382_126096362
tx.15218	chr4	-	2614	3	FSM	ENSMUSG00000043962.17	ENSMUST00000168568.8	521	3	14	-2107	2	1926	multi-exon	FALSE	canonical	3	517	junction_2	84.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTTATCAGACCCTTAA	6789	False	NA	NA	False	NA	NA	NA	126096438	126077931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_126080382_126088109_126088198_126096362
tx.15219	chr4	-	1875	10	FSM	ENSMUSG00000023232.18	ENSMUST00000105996.8	1878	10	1	2	1	-2	multi-exon	FALSE	canonical	2	4	junction_9	3.01027048536535	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTCCCATGTCTTG	7797	False	NA	NA	False	NA	NA	NA	130169378	130147289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130169250
tx.1522	chr11	-	704	3	NNC	ENSMUSG00000060923.6	novel	863	4	NA	NA	158	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.5	24	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTACTGTTGCCTA	NA	False	NA	NA	False	NA	NA	NA	30599429	30455990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_30456440_30582207_30582334_30599300
tx.15220	chr4	+	1132	2	FSM	ENSMUSG00000037583.3	ENSMUST00000042706.3	1132	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTAGTTGCTTGTGGAA	NA	False	NA	NA	False	NA	NA	NA	133280686	133283847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_133281277_133283305
tx.15221	chr4	+	1309	9	ISM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	11774	0	-3500	0	3prime_fragment	FALSE	canonical	3	9	junction_1	6.25999201277446	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAAGGTCTCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	134603620	134623483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_134603813_134607200_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
tx.15222	chr4	+	1268	9	NNC	ENSMUSG00000028825.8	novel	701	5	NA	NA	-226	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.16145667145271	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAAGGTCTCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	134606894	134623483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_134607046_134607200_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
tx.15223	chr4	-	1658	5	NNC	ENSMUSG00000043924.17	novel	1801	5	NA	NA	4118	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	7.44983221287567	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTTGTCACCTTGCA	NA	False	NA	NA	False	NA	NA	NA	135108838	135096886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_135098022_135099187_135099273_135104301_135104388_135107962_135108150_135108673
tx.15224	chr4	-	1845	5	FSM	ENSMUSG00000043924.17	ENSMUST00000105859.8	1801	5	-44	0	-7	0	multi-exon	FALSE	canonical	3	9	junction_3	5.49431524395898	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTTGTCACCTTGCA	5685	False	NA	NA	False	NA	NA	NA	135125545	135096886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135098022_135099187_135099273_135104301_135104388_135107962_135108150_135125193
tx.15225	chr4	+	742	3	Antisense	novelGene_ENSMUSG00000037188.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	1.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACAGTGTTCCTGTGCC	351	False	NA	NA	False	NA	NA	NA	135272528	135274603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr4_+_135272579_135273574_135273632_135273968
tx.15226	chr4	+	2381	11	ISM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	10	41256	10	-6095	5prime_fragment	FALSE	canonical	3	584	junction_9	208.215657432384	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCTCCAGAAGAGGGCGT	580	False	NA	NA	False	NA	NA	NA	137321527	137344586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668
tx.15227	chr4	+	1681	6	FSM	ENSMUSG00000028750.13	ENSMUST00000030530.6	1618	6	-59	-4	-59	4	multi-exon	FALSE	canonical	1	1	junction_2	1.01980390271856	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTCTGAAGTTGATG	NA	False	NA	NA	False	NA	NA	NA	138452576	138471890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_138452800_138453041_138453169_138458834_138458936_138461572_138461718_138463292_138463397_138470909
tx.15228	chr4	+	2306	7	NNC	ENSMUSG00000028737.16	novel	4142	15	NA	NA	18721	0	intron_retention	FALSE	canonical	3	14	junction_1	86.9471423081607	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATTTTGATCGTGTGT	5533	False	NA	NA	False	NA	NA	NA	139369140	139376998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_139369278_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
tx.15229	chr4	-	1998	10	FSM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	-23	4	-23	-4	multi-exon	FALSE	canonical	3	57	junction_6	13.4421485642992	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTCTGGCCCTATATT	NA	False	NA	NA	False	NA	NA	NA	139974118	139754160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
tx.1523	chr11	-	587	5	ISM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	11053	828	4986	149	3prime_fragment	TRUE	canonical	3	85	junction_1	6.75925291729789	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTCACTTCATTCA	NA	False	NA	NA	False	NA	NA	NA	30893099	30881601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038
tx.15230	chr4	-	1078	5	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	7317	185	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	47.4368000607124	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCACGGCTGGCAAGAT	NA	False	NA	NA	False	NA	NA	NA	140477919	140472990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477831
tx.15231	chr4	+	701	2	ISM	ENSMUSG00000036622.16	ENSMUST00000151517.8	4266	26	19638	0	2121	0	3prime_fragment	FALSE	canonical	3	128	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	140733848	140734641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_140734160_140734251
tx.15232	chr4	-	963	3	FSM	ENSMUSG00000040842.18	ENSMUST00000039939.7	3200	3	9	2228	0	1338	multi-exon	FALSE	canonical	3	50	junction_2	204	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAGTTTAATGAATTTT	NA	False	NA	NA	False	NA	NA	NA	140867077	140842539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_140843176_140845837_140846090_140867002
tx.15233	chr4	+	2077	3	NIC	ENSMUSG00000028919.12	novel	3414	17	NA	NA	7077	351	intron_retention	FALSE	canonical	3	67	junction_1	4.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCAGATATTTTTTTTT	3911	False	NA	NA	False	NA	NA	NA	140981313	140985226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_140982092_140983614_140983720_140984032
tx.15234	chr4	+	3337	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	549	0	3	0	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	143139544	143147661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
tx.15235	chr4	-	4465	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-229	5	-212	-5	multi-exon	TRUE	canonical	2	51	junction_4	9.87139526330723	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGAGCTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	147989373	147958060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
tx.15238	chr4	-	1889	8	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	22	5662	22	-461	5prime_fragment	FALSE	canonical	1	98	junction_2	82.2164887380151	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGATGGTTTGTTAAAG	NA	False	NA	NA	False	NA	NA	NA	149251142	149240109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
tx.1524	chr11	+	1958	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	37	1233	13	138	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCTGGATGTGACTT	NA	False	NA	NA	False	NA	NA	NA	30904431	31051471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
tx.15240	chr4	-	2653	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	164	43	2	-43	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACATGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	154384347	154362985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
tx.15241	chr4	-	2461	6	NIC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	-98	-3165	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.38093073590279	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCGTGTGATAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	154419477	154403746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
tx.15242	chr4	+	429	2	NNC	ENSMUSG00000029056.14	novel	2508	19	NA	NA	0	-13847	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTCCAGCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	155048579	155049764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_155048727_155049482
tx.15243	chr4	+	1496	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	141	1451	135	165	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGTGTGATTGTGAGA	NA	False	NA	NA	False	NA	NA	NA	155575961	155642275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
tx.15244	chr4	+	2645	10	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	284.418488399066	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9712	False	NA	NA	False	NA	NA	NA	155648296	155675454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155673784
tx.15245	chr4	+	2801	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	208.120662116956	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9714	False	NA	NA	False	NA	NA	NA	155648298	155675454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
tx.15246	chr4	-	3489	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	93.6566068144688	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7421	False	NA	NA	False	NA	NA	NA	155753654	155739138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753447
tx.15247	chr4	+	2624	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	69	junction_5	54.3310166939659	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8249	False	NA	NA	False	NA	NA	NA	156194432	156211722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
tx.15248	chr4	+	2768	10	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	9	junction_3	76.5216018883266	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	NA	False	NA	NA	NA	156194441	156211722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
tx.15249	chr5	+	765	5	NNC	ENSMUSG00000040274.12	novel	11525	8	NA	NA	2019	-1156	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	42.6577953016796	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTGCCATTTCGTTTT	705	False	NA	NA	False	NA	NA	NA	3522967	3571069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_3523011_3523118_3523229_3565453_3565505_3569358_3569495_3570644
tx.1525	chr11	-	1298	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	-31	-249	-15	4	multi-exon	FALSE	canonical	3	22	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTGTCATTTCTGATT	NA	False	NA	NA	False	NA	NA	NA	30936365	30926702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_30927747_30936111
tx.15250	chr5	+	1549	3	NNC	ENSMUSG00000053178.6	novel	1368	2	NA	NA	16	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGATTACATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	4242382	4247642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_4242419_4245994_4246201_4246335
tx.15251	chr5	-	5528	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	26	-4	26	4	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTACCTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	21156794	21098021	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
tx.15252	chr5	-	1338	5	NIC	ENSMUSG00000105987.5	novel	345	4	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.74536878161602	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTCTGAGGTCTTCTT	5260	False	NA	NA	False	NA	NA	NA	23917661	23903289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_23904335_23905278_23905472_23915363_23915407_23916113_23916149_23917639
tx.15253	chr5	-	357	2	NNC	ENSMUSG00000038135.5	novel	221	2	NA	NA	-748	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGCGGGCCTCGGAGT	NA	False	NA	NA	False	NA	NA	NA	24957070	24955999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_24956188_24956901
tx.15254	chr5	-	2942	16	FSM	ENSMUSG00000028944.15	ENSMUST00000030784.14	3331	16	379	10	379	-6	multi-exon	FALSE	canonical	3	8	junction_12	63.6806616381038	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTAAAGTTTTTATGT	NA	False	NA	NA	False	NA	NA	NA	25305261	25067751	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
tx.15255	chr5	-	2165	4	NIC	ENSMUSG00000044681.20	novel	3018	4	NA	NA	76	-813	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	81.5693297481079	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTCTCTGCCTGT	NA	False	NA	NA	False	NA	NA	NA	28414944	28406629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_28408435_28412284_28412382_28414121_28414326_28414885
tx.15256	chr5	+	2997	11	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	38	5567	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	52.8295371927485	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGGACCAGAGCGAGC	2997	False	NA	NA	False	NA	NA	NA	29639699	29656920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
tx.15257	chr5	+	1410	9	NIC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-20	98	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	19.6050854372023	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCCCTTATTTTATA	NA	False	NA	NA	False	NA	NA	NA	30869217	30944376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30944046
tx.15258	chr5	-	1953	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-21	1	intron_retention	FALSE	canonical	1	1	junction_3	89.7490328019689	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTCTGCTGAATTGG	NA	False	NA	NA	False	NA	NA	NA	31359668	31356323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_31357492_31357578_31358167_31358926_31359083_31359627
tx.15259	chr5	-	1806	6	FSM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	242	-3	-18	3	multi-exon	FALSE	canonical	1	2	junction_2	1.4142135623731	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTGACCTCCCACCATC	NA	False	NA	NA	False	NA	NA	NA	33375557	33371267	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_33371997_33372892_33373068_33373676_33373869_33373940_33374165_33374587_33374808_33375291
tx.1526	chr11	-	1318	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	-6	3	-6	-3	multi-exon	FALSE	canonical	3	30	junction_1	6	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTCTAAGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	30936356	30926709	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_30927747_30929564_30929601_30936111
tx.15260	chr5	-	1756	6	ISM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	15654	3	-9787	-3	3prime_fragment	FALSE	canonical	3	739	junction_1	55.7185785891923	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCCTGGCACCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	33416684	33405069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481
tx.15261	chr5	+	2354	15	NIC	ENSMUSG00000037313.17	novel	2899	16	NA	NA	10	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	252.930175086698	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAGGTCGCCAAGATAT	NA	False	NA	NA	False	NA	NA	NA	33815907	33836325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33835963
tx.15262	chr5	-	436	2	ISM	ENSMUSG00000005299.7	ENSMUST00000149886.2	3056	7	9781	-217	9781	217	3prime_fragment	FALSE	canonical	3	470	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTTTAATTTTCATCA	NA	False	NA	NA	False	NA	NA	NA	33901125	33899660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_33899957_33900985
tx.15263	chr5	+	3798	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	-48	11	21	3	multi-exon	FALSE	canonical	3	389	junction_14	43.2925501438664	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	NA	False	NA	NA	NA	34731168	34789641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
tx.15264	chr5	-	1065	4	ISM	ENSMUSG00000036553.17	ENSMUST00000129664.8	3411	12	15338	-2	15338	0	3prime_fragment	FALSE	canonical	3	78	junction_3	17.2497987105808	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	NA	False	NA	NA	NA	35858257	35854524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928
tx.15265	chr5	-	3839	13	NIC	ENSMUSG00000029192.18	novel	4590	14	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	27.1779117830802	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	8930	False	NA	NA	False	NA	NA	NA	36739736	36647951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36739698
tx.15266	chr5	-	1905	8	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	15977	-347	-1713	347	3prime_fragment	FALSE	canonical	3	157	junction_7	33.0448056988306	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAATCTGGCCTCCGATTT	NA	False	NA	NA	False	NA	NA	NA	36972020	36963917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672
tx.15267	chr5	+	3280	6	FSM	ENSMUSG00000031558.16	ENSMUST00000172998.8	3265	6	1	-16	1	16	multi-exon	FALSE	canonical	3	145	junction_5	11.9833217431562	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTTCTTTTGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	48140496	48340515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587
tx.15268	chr5	-	4714	25	FSM	ENSMUSG00000029191.17	ENSMUST00000204965.3	4751	25	37	0	-12	0	multi-exon	FALSE	canonical	3	270	junction_12	80.615847887097	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	11	False	NA	NA	False	NA	NA	NA	65492976	65419194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
tx.15269	chr5	-	2642	19	FSM	ENSMUSG00000029217.17	ENSMUST00000071944.13	2659	19	-1	18	-1	0	multi-exon	FALSE	canonical	1	2	junction_5	3.16471674858358	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTATCTCTTTAGCTGAA	NA	False	NA	NA	False	NA	NA	NA	73025788	72913076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_72913723_72914705_72914864_72914946_72915066_72917685_72917751_72920906_72921124_72921466_72921639_72922854_72922930_72926047_72926182_72928489_72928570_72931173_72931229_72936763_72936830_72939345_72939519_72941060_72941102_72943259_72943389_72944080_72944163_72946482_72946588_72980798_72980985_72982386_72982474_73025736
tx.1527	chr11	-	1348	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	2	2590	2	-1911	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGTCTGTGGAGTTAG	NA	False	NA	NA	False	NA	NA	NA	31320072	31309896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
tx.15270	chr5	-	2680	13	ISM	ENSMUSG00000070733.14	ENSMUST00000101127.12	11340	63	-13	97129	-13	874	5prime_fragment	FALSE	canonical	3	41	junction_1	11.2875915155636	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATATTGTCCCTTCT	NA	False	NA	NA	False	NA	NA	NA	73413975	73274793	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
tx.15271	chr5	-	2083	6	ISM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	3045	11	2611	3	3prime_fragment	FALSE	canonical	3	127	junction_2	12.687001221723	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAGCCAATACGCTGGC	NA	False	NA	NA	False	NA	NA	NA	73493290	73479552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162
tx.15272	chr5	+	1615	10	NNC	ENSMUSG00000029154.14	novel	620	3	NA	NA	-10759	-148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTGTTTTAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	73576914	73610620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_73577309_73578796_73578923_73581257_73581338_73585909_73586016_73587754_73587891_73589166_73589317_73591566_73591712_73595777_73595840_73598647_73598804_73610360
tx.15273	chr5	+	1903	3	NNC	ENSMUSG00000106968.2	novel	848	2	NA	NA	-42	954	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGAATCTGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	74103681	74106673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_74103968_74104279_74104339_74105115
tx.15274	chr5	+	1748	4	FSM	ENSMUSG00000029249.16	ENSMUST00000113449.2	6924	4	119	5057	119	-5057	multi-exon	FALSE	canonical	3	119	junction_1	347.74543690592	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCTGAGTGCAAATCAA	4520	False	NA	NA	False	NA	NA	NA	77414161	77429222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549
tx.15275	chr5	+	3097	18	NIC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	29	60	combination_of_known_junctions	FALSE	canonical	3	72	junction_14	69.4558185225946	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGGAGTGGCATTATG	NA	False	NA	NA	False	NA	NA	NA	86952383	86984578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
tx.15276	chr5	-	2293	8	NNC	ENSMUSG00000029410.12	novel	2274	16	NA	NA	-11054	429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.25905486623571	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTTTTTCCTTGCCGCT	NA	False	NA	NA	False	NA	NA	NA	92387934	92374108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_92375087_92376505_92376594_92378261_92378426_92379578_92379686_92382032_92382176_92383590_92383777_92386603_92387003_92387706
tx.15277	chr5	+	3580	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	0	1448	0	-1448	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGACGTGCTTTCGCC	NA	False	NA	NA	False	NA	NA	NA	93241295	93321369	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
tx.15278	chr5	+	1504	5	ISM	ENSMUSG00000058013.12	ENSMUST00000201700.4	3478	9	9	12053	-1	3	5prime_fragment	FALSE	canonical	3	719	junction_4	22.6867251933813	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATAGTACTTTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	93241305	93305564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709
tx.15279	chr5	-	1510	3	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTCGTGTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	96447919	96445402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_-_96445449_96445497_96446698_96447655
tx.1528	chr11	-	975	4	NNC	ENSMUSG00000020303.3	novel	544	2	NA	NA	2	733	intron_retention	FALSE	canonical	3	7	junction_1	66.9676538835479	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCCAACTGTAGGATC	NA	False	NA	NA	False	NA	NA	NA	31320072	31314707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_31314967_31315331_31315544_31317725_31317869_31319711
tx.15280	chr5	+	741	6	FSM	ENSMUSG00000105078.3	ENSMUST00000198837.3	677	6	-58	-6	4	6	multi-exon	FALSE	canonical	1	1	junction_2	2.03960780543711	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTCTGCACCCAATAACT	NA	False	NA	NA	False	NA	NA	NA	100054116	100098957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_100054265_100067054_100067126_100070875_100070973_100072700_100072803_100089084_100089247_100098796
tx.15282	chr5	+	2887	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	0	-3	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.86939558874797	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCATTATTCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	100994084	101046968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
tx.15283	chr5	+	1884	10	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	50404	49	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	5.55999822364302	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACCAATTCAGACATCC	4836	False	NA	NA	False	NA	NA	NA	103727835	103746218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_103727978_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
tx.15284	chr5	+	1035	7	ISM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	-21	19242	-18	71	5prime_fragment	FALSE	canonical	3	25	junction_1	3.39934634239519	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTGAAAAATATGGAGATG	NA	False	NA	NA	False	NA	NA	NA	106024412	106044442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357
tx.15285	chr5	-	1711	5	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	-12	735	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	72.3165783206036	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCATGATTTACTGTGT	NA	False	NA	NA	False	NA	NA	NA	108134911	108056833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_108058028_108059477_108059655_108062211_108062320_108072450_108072586_108134814
tx.15286	chr5	+	3193	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	179	1	-10	-1	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGCCTCCCAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	108817150	108832422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
tx.15288	chr5	-	436	3	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	2228	1630	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_2	23	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGCAGTAAGGCTCTCG	NA	False	NA	NA	False	NA	NA	NA	109699794	109698127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_109698395_109699328_109699371_109699667
tx.1529	chr11	-	716	2	ISM	ENSMUSG00000020303.3	ENSMUST00000152094.2	447	3	-28	-23	-1	23	intron_retention	FALSE	canonical	3	18	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTAGATTCTGAAATTG	NA	False	NA	NA	False	NA	NA	NA	31320075	31317975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_31318328_31319711
tx.15290	chr5	-	1468	8	FSM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	-63	0	-6	0	multi-exon	FALSE	canonical	1	3	junction_7	232.416937104552	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109706865	109702574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705616_109706670
tx.15291	chr5	-	1211	8	NNC	ENSMUSG00000033467.13	novel	1405	8	NA	NA	-127	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	231.923280770313	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109706986	109702574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706913
tx.15292	chr5	+	2490	6	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	248	269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.9714949216282	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATACCGCACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	110071513	110092071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_110071633_110076627_110076764_110088291_110088419_110088605_110088667_110089940_110090072_110090155
tx.15293	chr5	+	2803	14	NIC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	3	-1	combination_of_known_junctions	TRUE	canonical	3	11	junction_1	24.5195248851138	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	112490951	112526279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_112490989_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
tx.15294	chr5	+	3307	14	FSM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	37	1	20	-1	multi-exon	FALSE	canonical	3	34	junction_1	19.6098031274724	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	112490985	112526279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
tx.15295	chr5	-	2330	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	-14	4217	-14	1411	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCATTCTGCTGTGCAAC	525	False	NA	NA	False	NA	NA	NA	113163394	113062564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
tx.15296	chr5	+	1272	2	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTGCCTGCTTGCTTA	NA	False	NA	NA	False	NA	NA	NA	113482759	113484314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_113483478_113483760
tx.15297	chr5	+	857	3	ISM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	2418	0	1374	0	3prime_fragment	FALSE	canonical	3	17	junction_2	359	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	6068	False	NA	NA	False	NA	NA	NA	113913281	113916334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_113913390_113914831_113915140_113915893
tx.15299	chr5	+	3616	21	FSM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	26	825	26	525	multi-exon	TRUE	canonical	0	0	junction_10	2.74727137356323	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAATACCTAAAGAAAC	1412	False	NA	NA	False	NA	NA	NA	117258219	117412457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
tx.153	chr1	+	2007	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	36	797	7	164	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	472	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55170425	55193261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
tx.1530	chr11	+	2003	2	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACATGGTGTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	31495647	31499649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_+_31496002_31498000
tx.15300	chr5	+	3880	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	4	-1	4	0	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGACCTGCCCGCTT	NA	False	NA	NA	False	NA	NA	NA	118114852	118148266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
tx.15301	chr5	+	4795	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	349	-162	0	-1	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	NA	False	NA	NA	NA	119809082	119822788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
tx.15303	chr5	-	528	2	FSM	ENSMUSG00000029454.16	ENSMUST00000128782.8	358	2	-169	-1	-169	1	multi-exon	FALSE	canonical	3	204	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCTTAAAGTTGCTAT	9924	False	NA	NA	False	NA	NA	NA	121664064	121663113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_121663303_121663725
tx.15304	chr5	-	1775	12	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	15222	2732	-312	-2732	internal_fragment	TRUE	canonical	3	28	junction_4	16.0906522835182	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGGAATGTCACTCAGT	NA	False	NA	NA	False	NA	NA	NA	122902240	122881413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836
tx.15305	chr5	-	700	3	NNC	ENSMUSG00000072591.11	novel	2429	6	NA	NA	-1330	17	intron_retention	FALSE	canonical	1	4	junction_2	4	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGTGTTGTCCCTCC	NA	False	NA	NA	False	NA	NA	NA	128679087	128656152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_128656350_128662335_128662471_128678719
tx.15306	chr5	-	1632	8	ISM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	8539	12	25	-12	3prime_fragment	FALSE	canonical	3	313	junction_2	27.7613738412028	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTGTAAAAGTTTGACT	NA	False	NA	NA	False	NA	NA	NA	134197074	134176904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050
tx.15307	chr5	+	1075	6	NNC	ENSMUSG00000040557.15	novel	1790	6	NA	NA	-9	397	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.1687404574316	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAGGACTCAGGTTCC	3403	False	NA	NA	False	NA	NA	NA	134961212	134966525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_134961265_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134965987
tx.15308	chr5	-	1545	13	NIC	ENSMUSG00000039959.14	novel	3253	13	NA	NA	34	8	combination_of_known_junctions	FALSE	canonical	2	166	junction_11	29.2616311157727	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAATTTGTTATCATAAC	9644	False	NA	NA	False	NA	NA	NA	135518078	135464960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
tx.15309	chr5	+	2288	17	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	1327	104	870	-104	3prime_fragment	FALSE	canonical	3	145	junction_7	17.0714262365509	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCGTGAGTCCAATATA	NA	False	NA	NA	False	NA	NA	NA	137017199	137025398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
tx.1531	chr11	+	1483	5	FSM	ENSMUSG00000020299.7	ENSMUST00000102829.4	2000	5	-23	540	-23	-540	multi-exon	FALSE	canonical	3	12	junction_4	0.707106781186548	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTGAACAGCAGATGTG	2261	False	NA	NA	False	NA	NA	NA	31915568	31929111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_31915952_31923555_31923642_31925036_31925136_31926785_31926831_31928241
tx.15310	chr5	-	1379	9	FSM	ENSMUSG00000029713.16	ENSMUST00000150063.9	1569	9	566	-376	168	0	multi-exon	FALSE	canonical	3	641	junction_6	43.7428565596715	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTCTCCTTGCTTACTG	4311	False	NA	NA	False	NA	NA	NA	137528993	137526388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956
tx.15311	chr5	-	2439	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	183.295568157341	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1956	False	NA	NA	False	NA	NA	NA	138185484	138176878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185292
tx.15312	chr5	+	1342	2	FSM	ENSMUSG00000085227.2	ENSMUST00000141454.2	624	2	-392	-326	-381	-3	multi-exon	FALSE	canonical	3	10	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGAGGACACAAGTTTAT	5794	False	NA	NA	False	NA	NA	NA	138261923	138264920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138262364_138264018
tx.15313	chr5	+	4122	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	11	1	5	-1	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	NA	False	NA	NA	NA	139186402	139235594	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.15314	chr5	+	3667	7	FSM	ENSMUSG00000036817.15	ENSMUST00000100517.10	1522	7	0	-2145	0	-347	multi-exon	FALSE	canonical	3	11	junction_6	372.028971392761	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTTTTGCTTATTAC	NA	False	NA	NA	False	NA	NA	NA	139186421	139216240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139213287
tx.15315	chr5	+	3691	20	FSM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	25	-2	1	2	multi-exon	FALSE	canonical	3	84	junction_6	213.143404315789	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCGATTTCAAGTGATTA	NA	False	NA	NA	False	NA	NA	NA	139186422	139235552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.1532	chr11	-	2187	3	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_2	7	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTATTGCATACCATCAT	NA	False	NA	NA	False	NA	NA	NA	31937015	31930695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_31932543_31934463_31934750_31936961
tx.15320	chr5	-	3136	5	FSM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	16	-764	-12	-1	multi-exon	FALSE	canonical	3	38	junction_4	36.6401419211225	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGCAAACTTATTT	2776	False	NA	NA	False	NA	NA	NA	146157770	146146002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157749
tx.15323	chr5	-	3512	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	0	3667	0	3443	multi-exon	TRUE	canonical	3	299	junction_1	51.9975293216472	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTTTTGACCCAAG	5418	False	NA	NA	False	NA	NA	NA	148336714	148267886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
tx.15324	chr5	-	291	2	NNC	ENSMUSG00000106951.2	novel	3994	2	NA	NA	-4	5611	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTTCAGTTGATGAGC	NA	False	NA	NA	False	NA	NA	NA	148932037	148921254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_148921436_148931927
tx.15325	chr5	+	1870	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	-14	2714	-14	-722	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTCTCCATTGTA	NA	False	NA	NA	False	NA	NA	NA	149601680	149683350	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
tx.15326	chr5	+	1192	7	NIC	ENSMUSG00000056602.14	novel	592	4	NA	NA	-31	447	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	2.26691175145591	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGACATCTTTTAGT	1244	False	NA	NA	False	NA	NA	NA	150119899	150269836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510
tx.15327	chr6	+	3113	18	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	28.9182118357714	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTATTTGAAATTCATA	-8	True	NA	NA	False	NA	NA	NA	11907855	12081197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
tx.15328	chr6	-	2586	15	FSM	ENSMUSG00000003500.14	ENSMUST00000159124.8	2600	15	13	1	-9	0	multi-exon	FALSE	canonical	1	64	junction_14	59.8544152123146	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATCCTGTTTCTG	-2	True	NA	NA	False	NA	NA	NA	29216350	29200436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
tx.15329	chr6	+	1369	6	ISM	ENSMUSG00000058440.15	ENSMUST00000115208.8	2492	12	67010	11639	-1060	-20	internal_fragment	FALSE	canonical	3	271	junction_5	110.457955802197	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGAGGCTTTACTGA	NA	False	NA	NA	False	NA	NA	NA	30115053	30140883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
tx.1533	chr11	+	2277	5	FSM	ENSMUSG00000020297.11	ENSMUST00000020537.9	2239	5	-39	1	-39	-1	multi-exon	FALSE	canonical	1	5	junction_2	2.06155281280883	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGACTGTCTGTCCA	NA	False	NA	NA	False	NA	NA	NA	31950423	32009201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_31950597_31951730_31951881_31967650_31967735_32005012_32005124_32007442
tx.15330	chr6	-	2307	10	ISM	ENSMUSG00000038784.14	ENSMUST00000044163.10	3337	11	6	5727	6	1787	5prime_fragment	FALSE	canonical	3	46	junction_3	50.2625207053359	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTCAAAATTAATGAG	7661	False	NA	NA	False	NA	NA	NA	35110644	35027616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
tx.15331	chr6	-	332	2	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCCCTTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	39539689	39538117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_-_39538218_39539457
tx.15332	chr6	+	2523	8	FSM	ENSMUSG00000046947.13	ENSMUST00000140364.8	3542	8	0	1019	0	-2	multi-exon	FALSE	canonical	3	19	junction_2	10.7437689582647	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTTCTTCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	39550806	39564684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560744_39560997_39562660_39562790_39563774_39563829_39564302
tx.15333	chr6	+	2395	9	NIC	ENSMUSG00000029860.17	novel	2605	10	NA	NA	-25	3	intron_retention	FALSE	canonical	3	26	junction_3	4.92442890089805	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTAGTACTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	42326941	42335329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
tx.15334	chr6	-	2537	8	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	211	4	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	11.1721227405812	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGCTGTGGTATTAAGT	NA	False	NA	NA	False	NA	NA	NA	43602689	43321930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43602626
tx.15335	chr6	+	3108	3	FSM	ENSMUSG00000052751.17	ENSMUST00000118229.2	3138	3	27	3	18	-2	multi-exon	FALSE	canonical	3	41	junction_2	5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGCTGGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	48570851	48576013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_48570987_48571724_48571911_48573226
tx.15336	chr6	+	819	7	ISM	ENSMUSG00000005225.16	ENSMUST00000101385.3	1838	14	20926	-1	20926	1	3prime_fragment	FALSE	canonical	3	262	junction_6	17.650936393165	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCCCTAGTTAATTTC	4339	False	NA	NA	False	NA	NA	NA	54601057	54618019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
tx.15337	chr6	+	1447	3	ISM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	61455	3764	60923	-3764	3prime_fragment	FALSE	canonical	3	641	junction_2	24	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATGGTTAAGAATACTG	275	False	NA	NA	False	NA	NA	NA	54855355	54866721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_54855440_54861749_54861832_54865440
tx.15338	chr6	-	2917	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	5	-3	0	3	multi-exon	FALSE	canonical	3	18	junction_1	0.866025403784439	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGATTTTTTTGGGGG	NA	False	NA	NA	False	NA	NA	NA	57802139	57729246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
tx.15339	chr6	-	1443	11	FSM	ENSMUSG00000056698.12	ENSMUST00000141833.8	2509	11	-8	1074	-8	704	multi-exon	FALSE	canonical	3	36	junction_10	7.7	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTGGCCTGGAACTT	NA	False	NA	NA	False	NA	NA	NA	72575386	72545606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
tx.1534	chr11	+	809	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	17	-5	-14	5	multi-exon	FALSE	canonical	3	400	junction_3	16.768646337734	482	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGCCATAGTACTCT	NA	False	NA	NA	False	NA	NA	NA	32155431	32158989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
tx.15340	chr6	+	2082	11	NNC	ENSMUSG00000034930.17	novel	2191	12	NA	NA	-1957	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.1765642063869	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTCTTTCACTTGTC	1116	False	NA	NA	False	NA	NA	NA	83122858	83129558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126356_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
tx.15341	chr6	-	2742	4	ISM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	2657	1078	2129	-1078	3prime_fragment	FALSE	canonical	3	165	junction_3	8.17856276425687	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCTTAAAAATTATTTT	NA	False	NA	NA	False	NA	NA	NA	86371479	86364065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390
tx.15342	chr6	+	545	2	FSM	ENSMUSG00000046679.17	ENSMUST00000143430.2	505	2	-34	-6	-18	6	multi-exon	FALSE	canonical	3	10	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCGGGTCTCAAATTAC	1753	False	NA	NA	False	NA	NA	NA	86415655	86416476	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_86415830_86416105
tx.15343	chr6	+	354	2	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTCGCGTTGTC	NA	False	NA	NA	False	NA	NA	NA	88129338	88131973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_88129564_88131844
tx.15344	chr6	+	2338	2	FSM	ENSMUSG00000030087.12	ENSMUST00000203607.2	2240	2	-98	0	-98	0	multi-exon	FALSE	canonical	3	353	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACCATTTTTTGGCCCT	NA	False	NA	NA	False	NA	NA	NA	90443283	90452217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_90444506_90451101
tx.15345	chr6	+	2229	11	FSM	ENSMUSG00000030089.16	ENSMUST00000044019.16	2412	11	183	0	183	0	multi-exon	FALSE	canonical	3	6	junction_2	19.246038553427	3	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCCTCCATCCTTC	NA	False	NA	NA	False	NA	NA	NA	90581889	90623394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
tx.15346	chr6	+	2780	12	NIC	ENSMUSG00000030095.11	novel	465	3	NA	NA	186	-4	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	39.0020130864214	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCAGTCGTTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	91453767	91465441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_91453845_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
tx.15347	chr6	-	3433	9	NIC	ENSMUSG00000030094.9	novel	4347	13	NA	NA	-30	-5436	intron_retention	FALSE	canonical	3	87	junction_7	19.6273883896967	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTAGAAGTGTTCCTCG	432	False	NA	NA	False	NA	NA	NA	91492807	91474690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_-_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
tx.15348	chr6	-	5271	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	55	8	-21	-8	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGACTTGTGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	92191851	92163700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
tx.15349	chr6	-	1244	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	162	3097	162	349	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCAACGCTGGTGCT	NA	False	NA	NA	False	NA	NA	NA	100264284	100208622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
tx.1535	chr11	+	1070	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	-9	676	-3	2	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	NA	False	NA	NA	NA	32176501	32182024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
tx.15350	chr6	+	2094	9	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	8	0	intron_retention	FALSE	canonical	3	21	junction_8	305.446292333038	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	NA	False	NA	NA	NA	106746138	106759435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756252_106758607
tx.15351	chr6	+	2419	2	ISM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	1892	152	-525	-152	3prime_fragment	FALSE	canonical	3	227	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAATGGTCTCCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	108639481	108643734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_108639606_108641439
tx.15352	chr6	+	1667	15	ISM	ENSMUSG00000030270.12	ENSMUST00000130191.8	2115	21	1976	-3	1921	3	3prime_fragment	FALSE	canonical	0	0	junction_6	5.90053612230382	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTCTCATGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	113261246	113281788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_113261423_113266945_113267010_113267127_113267232_113267365_113267471_113268998_113269041_113269326_113269403_113269482_113269537_113269963_113270026_113270669_113270717_113271572_113271755_113271986_113272115_113277523_113277627_113278600_113278659_113279009_113279084_113281396
tx.15353	chr6	+	2303	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	8.17117899020487	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	5827	False	NA	NA	False	NA	NA	NA	113448458	113460101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
tx.15354	chr6	+	2267	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	80	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	10.3632969597244	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	5836	False	NA	NA	False	NA	NA	NA	113448467	113460101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453386_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
tx.15355	chr6	-	1332	7	ISM	ENSMUSG00000030321.16	ENSMUST00000184428.6	2384	9	16243	-165	16243	-2	3prime_fragment	FALSE	canonical	1	3	junction_5	2.26691175145591	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCTCGTGTGATTTCC	9642	False	NA	NA	False	NA	NA	NA	115799130	115787691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_115788195_115789154_115789212_115791461_115791613_115792898_115793113_115794193_115794391_115797005_115797163_115799077
tx.15356	chr6	+	483	3	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTTACATTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	117860823	117861556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr6_+_117860850_117860941_117861273_117861430
tx.15357	chr6	-	3730	20	ISM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	2960	0	2890	0	3prime_fragment	FALSE	canonical	3	328	junction_16	55.4914582531237	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	NA	False	NA	NA	False	NA	NA	NA	118393475	118360341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423
tx.15358	chr6	+	3054	7	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	0	-3832	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	75.5036790862244	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGTTTTGAATGTC	NA	False	NA	NA	False	NA	NA	NA	120813172	120865971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_120813319_120825416_120825513_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
tx.15359	chr6	-	2356	8	ISM	ENSMUSG00000040669.15	ENSMUST00000081849.10	3683	13	13531	5	11661	2	3prime_fragment	FALSE	canonical	3	902	junction_5	80.0357063173324	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTGTCTTACTGCATT	NA	False	NA	NA	False	NA	NA	NA	122300443	122294694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966
tx.1536	chr11	+	1040	4	NNC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	161.765948895997	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	NA	False	NA	NA	NA	32176510	32182024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_32176697_32177751_32177950_32179848_32180054_32181573
tx.15360	chr6	-	1965	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	18	-1227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.705322126499	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCATTGACTTGTAT	9324	False	NA	NA	False	NA	NA	NA	122463380	122432445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463339
tx.15361	chr6	+	1233	4	ISM	ENSMUSG00000030116.15	ENSMUST00000118626.8	748	9	8171	-658	-669	0	3prime_fragment	FALSE	canonical	1	2	junction_1	68.5921926234239	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTCACGGGCATGTTT	7062	False	NA	NA	False	NA	NA	NA	122498788	122506249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_122498888_122502909_122502998_122503745_122503820_122505277
tx.15362	chr6	+	2470	8	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	193.677935906863	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTTCATCTTTTA	853	False	NA	NA	False	NA	NA	NA	122851497	122865900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr6_+_122851623_122857371_122857473_122857616_122857722_122858400_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
tx.15365	chr6	-	1614	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	293	2	218	-2	multi-exon	FALSE	canonical	3	25	junction_7	24.4991836598692	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGAGGAGCTAGTTTG	1650	False	NA	NA	False	NA	NA	NA	128277483	128205145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
tx.15367	chr6	+	529	2	ISM	ENSMUSG00000041671.14	ENSMUST00000137098.8	3011	10	15192	-104	7930	104	3prime_fragment	FALSE	canonical	3	73	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTAATGACTCATTTG	3014	False	NA	NA	False	NA	NA	NA	142306595	142307881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr6_+_142306723_142307479
tx.15369	chr6	+	876	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	39	-16	39	16	multi-exon	FALSE	canonical	3	46	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTGACTGCT	NA	False	NA	NA	False	NA	NA	NA	145196293	145197591	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_145196516_145196937
tx.1537	chr11	-	1644	5	ISM	ENSMUSG00000020289.16	ENSMUST00000109390.8	3531	12	19057	780	680	11	3prime_fragment	FALSE	canonical	3	164	junction_4	3.53553390593274	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTGAGACTTGGGGA	NA	False	NA	NA	False	NA	NA	NA	32187356	32182042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299
tx.15370	chr6	+	2299	13	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	22.1514672200286	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGTCATGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	147377365	147534111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr6_+_147377394_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
tx.15371	chr6	+	4074	8	FSM	ENSMUSG00000003452.16	ENSMUST00000111513.9	4049	8	-11	-14	-11	14	multi-exon	FALSE	canonical	3	6	junction_7	6.57763681898362	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATAGTAAACCTTAGCTC	171	False	NA	NA	False	NA	NA	NA	149310502	149459331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
tx.15372	chr7	-	1017	12	NNC	ENSMUSG00000064179.14	novel	1027	14	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	20.3640422037481	4	5	2	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGGAGTACAACTTGT	9181	False	NA	NA	False	NA	NA	NA	4518974	4507567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513390_4516579_4516613_4516809_4516837_4517323_4517379_4518929
tx.15373	chr7	-	1834	6	NNC	ENSMUSG00000066838.8	novel	2777	5	NA	NA	1	-984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.1119016958796	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCGTGCTAATGGTG	NA	False	NA	NA	False	NA	NA	NA	7212996	7206099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7210686_7210729_7212716
tx.15374	chr7	+	2583	4	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	-243	-155	intron_retention	FALSE	canonical	3	27	junction_3	4.02768199119819	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGACTTTAAATACTTTT	NA	False	NA	NA	False	NA	NA	NA	12713203	12718081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_12713574_12713811_12713907_12715772_12715855_12716045
tx.15375	chr7	-	1608	9	FSM	ENSMUSG00000053175.18	ENSMUST00000120537.8	1850	9	242	0	242	0	multi-exon	TRUE	canonical	3	615	junction_1	42.6314144733669	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5971	False	NA	NA	False	NA	NA	NA	19556453	19542386	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
tx.15376	chr7	+	3112	4	FSM	ENSMUSG00000068962.8	ENSMUST00000205309.2	1037	4	-24	-2051	-24	-3	multi-exon	TRUE	canonical	2	5	junction_1	13.589211407093	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTGATTCT	NA	False	NA	NA	False	NA	NA	NA	23874460	23882610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_23874575_23875533_23875592_23877174_23877302_23879797
tx.15377	chr7	-	1066	6	FSM	ENSMUSG00000062773.7	ENSMUST00000078001.7	1059	6	-12	5	-12	-5	multi-exon	FALSE	canonical	2	2	junction_5	1.72046505340853	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTGTGCGCGTGCAT	990	False	NA	NA	False	NA	NA	NA	24371487	24367436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_24367828_24367933_24368066_24369138_24369325_24369757_24369899_24370003_24370109_24371376
tx.15378	chr7	+	727	2	ISM	ENSMUSG00000074274.8	ENSMUST00000186424.2	493	3	358	-407	358	-1	3prime_fragment	FALSE	canonical	2	4	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTGTGTGTTTGCT	940	False	NA	NA	False	NA	NA	NA	24854851	24856051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_24855046_24855518
tx.15379	chr7	+	2220	6	ISM	ENSMUSG00000063160.13	ENSMUST00000134215.2	3153	9	5364	-172	5364	9	3prime_fragment	FALSE	canonical	3	79	junction_2	9.04212364436585	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGTGTGTGCATACGAG	NA	False	NA	NA	False	NA	NA	NA	26966166	26981578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
tx.1538	chr11	-	2112	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	47	706	-2	266	multi-exon	TRUE	canonical	3	148	junction_6	11.6770786871831	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTGTGTATGTGTG	4614	False	NA	NA	False	NA	NA	NA	32217660	32182668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
tx.15380	chr7	-	2154	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	85.4033627850801	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTATAGTCTTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	27055411	27041557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
tx.15381	chr7	-	1658	2	Genic_Genomic	ENSMUSG00000082016.4	novel	765	1	NA	NA	-54	904	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATCTGAAAGAAAG	8903	False	NA	NA	False	NA	NA	NA	27170014	27168291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr7_-_27169822_27169886
tx.15382	chr7	+	610	3	NNC	ENSMUSG00000007944.9	novel	2052	3	NA	NA	-6391	-1138	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	1.5	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTTGTGTGGTCTTA	NA	False	NA	NA	False	NA	NA	NA	27346948	27355633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_27347078_27354336_27354520_27355335
tx.15383	chr7	+	2146	5	ISM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	199	3995	199	-1578	3prime_fragment	FALSE	canonical	3	19	junction_1	18.3762754659371	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTACTTTTAGTGATGG	NA	False	NA	NA	False	NA	NA	NA	27388963	27401914	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
tx.15384	chr7	+	3489	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	-1	2408	-1	833	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGACTCAGCAGGACAGT	NA	False	NA	NA	False	NA	NA	NA	27430812	27450719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
tx.15385	chr7	+	779	5	FSM	ENSMUSG00000037640.16	ENSMUST00000042641.14	2727	5	-77	2025	2	-110	multi-exon	FALSE	canonical	3	15	junction_1	62.997519792449	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGGAAGTGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	27430858	27447861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_27431090_27436360_27436414_27437727_27437855_27440381_27440481_27447592
tx.15386	chr7	+	1921	6	NIC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	21.4811545313561	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCATATCTTTTTCTT	9003	False	NA	NA	False	NA	NA	NA	28392431	28398763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_28392528_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
tx.15387	chr7	-	1195	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	0	0	intron_retention	TRUE	canonical	3	18	junction_6	105.086868827651	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	NA	False	NA	NA	NA	28855608	28851934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855455
tx.1539	chr11	+	621	3	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	-9	-38782	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	15	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTAATTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	32483295	32509746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_32483560_32505123_32505289_32509554
tx.15391	chr7	+	3590	3	NNC	ENSMUSG00000049421.14	novel	4006	3	NA	NA	0	0	intron_retention	FALSE	canonical	2	2	junction_1	67.5	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTTGTTTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	29794586	29807047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_29794637_29799000_29799148_29803654
tx.15392	chr7	+	1284	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	69.7438461918516	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	NA	False	NA	NA	NA	30014246	30018471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_30014512_30014686_30014826_30015719_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
tx.15393	chr7	-	2412	11	NIC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	5	4	combination_of_known_junctions	TRUE	canonical	3	37	junction_10	7.82304288624318	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTTACTGTTCATC	NA	False	NA	NA	False	NA	NA	NA	30251712	30238554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30251632
tx.15394	chr7	-	1345	7	NNC	ENSMUSG00000006313.6	novel	1421	8	NA	NA	2773	8	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	11.4661337085446	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGTTCTGTTCTG	4680	False	NA	NA	False	NA	NA	NA	30309499	30302508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_30303068_30303196_30303281_30304485_30304666_30306299_30306408_30306555_30306631_30309038_30309240_30309361
tx.15398	chr7	-	2799	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	147	-2	-61	2	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAACTATTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	34088965	34044068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
tx.15399	chr7	-	2360	9	ISM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	18533	60	-14	-43	3prime_fragment	FALSE	canonical	3	572	junction_4	56.3132977191001	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGCCACTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	34070579	34044130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479
tx.154	chr1	-	1111	9	NNC	ENSMUSG00000025977.16	novel	658	5	NA	NA	75	-3990	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	8.61321658847611	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGAATACTATCTTCAGT	NA	False	NA	NA	False	NA	NA	NA	55402553	55343217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_55343618_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55402457
tx.1540	chr11	-	978	4	Antisense	novelGene_ENSMUSG00000020272.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.63299316185545	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGAAATGCACATTACGA	NA	False	NA	NA	False	NA	NA	NA	32564688	32562190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_-_32562751_32563436_32563569_32563965_32564062_32564498
tx.15401	chr7	-	2300	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	203	938	183	-288	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGAACTTCCTGGTTT	NA	False	NA	NA	False	NA	NA	NA	37718764	37660354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
tx.15402	chr7	+	3065	5	NIC	ENSMUSG00000074165.11	novel	3775	6	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	17.8044938147649	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGTGAAAATTTTGGA	NA	False	NA	NA	False	NA	NA	NA	41282961	41300305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_41283119_41284103_41284135_41296914_41297042_41297242_41297304_41297616
tx.15403	chr7	+	344	3	Antisense	novelGene_ENSMUSG00000108491.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	5.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGGCTGCAGACTGTTA	NA	False	NA	NA	False	NA	NA	NA	42155259	42158298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr7_+_42155413_42157017_42157122_42158211
tx.15404	chr7	+	1013	5	NIC	ENSMUSG00000054046.8	novel	1809	6	NA	NA	-69	-774	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	27.4988636128841	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTACTGTGCCTCTCTCAC	NA	False	NA	NA	False	NA	NA	NA	43361921	43376184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_43362129_43370390_43370581_43370691_43370961_43373178_43373316_43375974
tx.15405	chr7	+	1333	6	FSM	ENSMUSG00000067616.12	ENSMUST00000080211.12	1312	6	-21	0	-21	0	multi-exon	TRUE	canonical	1	1	junction_4	3.00665927567458	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGTTGAGTGTCAAC	NA	False	NA	NA	False	NA	NA	NA	43424006	43428687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43424226_43425903_43425979_43426304_43426462_43426911_43427178_43427753_43427891_43428208
tx.15406	chr7	+	1000	2	ISM	ENSMUSG00000067616.12	ENSMUST00000171458.2	1260	5	1620	-8	1469	3	3prime_fragment	FALSE	canonical	2	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGAGTGTCAACTGC	NA	False	NA	NA	False	NA	NA	NA	43427372	43428690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_43427891_43428208
tx.15407	chr7	+	2529	6	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	218	junction_1	214.949854617304	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896187	43901739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.15408	chr7	+	2049	7	FSM	ENSMUSG00000045411.17	ENSMUST00000187524.7	676	7	-13	-1360	-1	0	multi-exon	FALSE	canonical	0	0	junction_2	348.685826433418	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	43896209	43901739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_43896233_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
tx.15409	chr7	+	434	2	Antisense	novelGene_ENSMUSG00000008028.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATTGGTTGTTTTGCT	2898	False	NA	NA	False	NA	NA	NA	44023705	44025093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr7_+_44023994_44024947
tx.1541	chr11	+	773	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26140	-1707	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	21.9696760710454	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGATCCTTGTGGGTTT	1665	False	NA	NA	False	NA	NA	NA	32564734	32572880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_32564811_32565780_32565907_32567848_32567963_32572423
tx.15410	chr7	+	1345	5	FSM	ENSMUSG00000011658.17	ENSMUST00000209132.2	853	5	-20	-472	-6	-341	multi-exon	FALSE	canonical	3	96	junction_1	10.3531396204243	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATAAAATAAGTGTATGG	NA	False	NA	NA	False	NA	NA	NA	44545496	44547722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943
tx.15411	chr7	-	2076	14	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-2304	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	184.666242994693	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATTGACTGCCCACC	NA	False	NA	NA	False	NA	NA	NA	44555612	44549799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494
tx.15412	chr7	-	988	6	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	59.7943141109587	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	44647008	44640645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_44640879_44642167_44642456_44643786_44643874_44645967_44646111_44646301_44646417_44646886
tx.15413	chr7	-	783	6	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	60.7730203297483	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGCCCGAAAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	44647004	44640650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_44640879_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
tx.15414	chr7	-	1442	7	FSM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	17	3	10	-3	multi-exon	FALSE	canonical	3	94	junction_6	35.1362427637839	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTGTCTGTCTGTCT	6677	False	NA	NA	False	NA	NA	NA	44741628	44732339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
tx.15415	chr7	-	2491	16	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_15	102.490454840113	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9346	False	NA	NA	False	NA	NA	NA	44803984	44791258	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44803815
tx.15416	chr7	-	2604	6	FSM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	-38	-25	-13	20	multi-exon	FALSE	canonical	3	78	junction_5	4.63033476111609	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTTATTCTCCTTCAAA	4406	False	NA	NA	False	NA	NA	NA	44888277	44883035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
tx.15417	chr7	+	2256	11	NIC	ENSMUSG00000023467.19	novel	1749	13	NA	NA	-303	-1	intron_retention	FALSE	canonical	2	3	junction_1	28.2708330262835	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTAGTTAGTGTAC	7833	False	NA	NA	False	NA	NA	NA	45163701	45172017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_45164131_45164841_45164981_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168331_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
tx.15418	chr7	+	1196	2	FSM	ENSMUSG00000059824.13	ENSMUST00000210120.2	815	2	-122	-259	-122	41	multi-exon	FALSE	canonical	3	63	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTTGTGGCGGACA	NA	False	NA	NA	False	NA	NA	NA	45357190	45359579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_45357896_45359088
tx.15419	chr7	+	1323	2	ISM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	-291	21283	-291	-2510	5prime_fragment	FALSE	canonical	3	601	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAAAGGTGATTGCTT	4415	False	NA	NA	False	NA	NA	NA	46445235	46451941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_46445713_46451095
tx.1542	chr11	-	1281	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	129	223	0	0	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	40610	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	NA	False	NA	NA	NA	33113077	33102509	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
tx.15420	chr7	+	4302	30	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	29601	-227	-3	200	3prime_fragment	FALSE	canonical	3	493	junction_18	45.2812324466838	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	NA	False	NA	NA	NA	55521603	55580446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
tx.15421	chr7	-	3322	8	NIC	ENSMUSG00000030452.17	novel	3925	7	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	93.4351242787186	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	55612221	55581033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55594706_55594834_55611199_55611321_55611947
tx.15422	chr7	+	2643	8	FSM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	-64	2509	0	0	multi-exon	FALSE	canonical	3	20	junction_5	19.3454102556442	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	66339641	66364495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
tx.15423	chr7	-	1354	9	FSM	ENSMUSG00000030556.14	ENSMUST00000187953.8	2761	9	-55	1462	6	-468	multi-exon	FALSE	canonical	3	8	junction_7	25.6709953059869	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGTTGTCTTCTGTGT	541	False	NA	NA	False	NA	NA	NA	67295010	67164621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67290851_67291089_67294925
tx.15424	chr7	-	783	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	254	4103	6	132	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTTTTGTTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	73207889	73193651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
tx.15425	chr7	+	2277	2	ISM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	59	6623	5	17	5prime_fragment	FALSE	canonical	3	36	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGACTTATCGGGTGT	NA	False	NA	NA	False	NA	NA	NA	75498116	75517256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_75498222_75515084
tx.15426	chr7	+	1799	4	NNC	ENSMUSG00000097023.9	novel	1062	2	NA	NA	271	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.62466929133727	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTCTTGTTTGTATAT	NA	False	NA	NA	False	NA	NA	NA	79165453	79182339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_79165680_79173664_79173725_79177510_79177618_79180933
tx.15427	chr7	-	2003	2	FSM	ENSMUSG00000030545.10	ENSMUST00000139620.2	331	2	140	-1812	140	-3	multi-exon	FALSE	canonical	3	20	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTGCGTCTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	79389964	79385707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_79387659_79389912
tx.15428	chr7	+	2630	8	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	37268	0	37	0	3prime_fragment	FALSE	canonical	3	12	junction_3	5.00611870512435	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGGTGTGATGATTAT	NA	False	NA	NA	False	NA	NA	NA	80744615	80755360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
tx.15429	chr7	-	2174	5	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	23597	0	-5341	0	3prime_fragment	FALSE	canonical	3	689	junction_4	19.536824204563	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	81455582	81441821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489
tx.1543	chr11	-	990	2	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATCATTATTTAAT	NA	False	NA	NA	False	NA	NA	NA	33487247	33482576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_33483454_33487134
tx.15430	chr7	+	2636	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	25	4059	25	-4059	multi-exon	FALSE	canonical	3	13	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTATTTTTATAGGATTTT	NA	False	NA	NA	False	NA	NA	NA	89053587	89058283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_89054180_89056239
tx.15431	chr7	-	2749	12	FSM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	17	16	5	0	multi-exon	FALSE	canonical	2	2	junction_3	4.22702834093188	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATTTTACTGTCTAGA	NA	False	NA	NA	False	NA	NA	NA	92286333	92233406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
tx.15432	chr7	+	1854	13	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	17	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.2324760147995	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGTGTTTTGGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	97020829	97041368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_97020940_97022875_97022955_97027307_97027358_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
tx.15433	chr7	+	2103	15	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	271	184	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	51.4204358644479	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATCTCAGCCATCCCAT	NA	False	NA	NA	False	NA	NA	NA	97438018	97560673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_97438182_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
tx.15434	chr7	+	1451	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	827	2642	-30	-2642	multi-exon	FALSE	canonical	3	32	junction_2	24	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTTAAACCAACCAACC	NA	False	NA	NA	False	NA	NA	NA	98917522	98966917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_98918521_98964895_98965110_98966678
tx.15438	chr7	-	2381	7	FSM	ENSMUSG00000073968.5	ENSMUST00000082175.7	2388	7	4	3	4	-3	multi-exon	FALSE	canonical	2	5	junction_6	1.21335164821342	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGATCACGAGTCTGC	NA	False	NA	NA	False	NA	NA	NA	102336530	102326791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_102328045_102328242_102328344_102328880_102328904_102329343_102329605_102330869_102330966_102333254_102333719_102336347
tx.1544	chr11	-	1420	4	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_2	5.79271573232759	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGTAGTCATCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	33494452	33487354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_33487917_33490994_33491103_33492017_33492568_33494252
tx.15441	chr7	-	4079	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	5	1197	-4	-1197	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTCTACACAATTGAGG	NA	False	NA	NA	False	NA	NA	NA	108682533	108634715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
tx.15442	chr7	-	1525	9	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51209	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	19.1861766644634	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCCCTCACGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	108986815	108878426	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108935247_108935353_108937526_108937641_108986659
tx.15444	chr7	-	3410	8	ISM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	1559	14	1460	-1	3prime_fragment	FALSE	canonical	3	53	junction_1	8.82251294665401	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACATGTAGAACATCAG	NA	False	NA	NA	False	NA	NA	NA	119391722	119383067	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653
tx.15445	chr7	-	1484	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	31	4470	31	59	multi-exon	FALSE	canonical	3	85	junction_2	16	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTGATAGGATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	119494937	119456488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_-_119457280_119458602_119459139_119494780
tx.15446	chr7	+	1705	3	NIC	ENSMUSG00000030922.13	novel	936	4	NA	NA	0	975	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	31.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCACAGTCAATAGGA	NA	False	NA	NA	False	NA	NA	NA	119495092	119516954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_119495114_119513395_119513489_119515363
tx.15447	chr7	-	1662	11	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_8	41.0980534818865	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	NA	False	NA	NA	NA	121732147	121706484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121728145_121728240_121728896_121728957_121731942
tx.15448	chr7	-	3497	21	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	122969221	122878493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
tx.15449	chr7	-	3502	17	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1921	0	intron_retention	FALSE	canonical	3	720	junction_12	107.660182257648	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9163	False	NA	NA	False	NA	NA	NA	126099351	126090879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300
tx.1545	chr11	-	2508	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	0	-3	0	3	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATTTTTTAATTCT	NA	False	NA	NA	False	NA	NA	NA	34724468	34700013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
tx.15450	chr7	-	1712	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	264.211444680203	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	348	False	NA	NA	False	NA	NA	NA	126625606	126621301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126625399
tx.15451	chr7	-	1887	4	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-190	-1	intron_retention	FALSE	canonical	3	387	junction_1	176.98775852207	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGAGTTCCTAAGTTA	1460	False	NA	NA	False	NA	NA	NA	126624494	126621302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047
tx.15452	chr7	-	1715	2	ISM	ENSMUSG00000030677.9	ENSMUST00000206412.2	3586	4	-41	2105	21	-748	5prime_fragment	FALSE	canonical	3	876	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATAGAGCCTTTAAAGC	7946	False	NA	NA	False	NA	NA	NA	126641622	126633504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_126635113_126641515
tx.15453	chr7	-	1228	7	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	198.070413966571	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCTCCATAGCTCCTT	5520	False	NA	NA	False	NA	NA	NA	126795110	126792839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
tx.15454	chr7	+	3122	3	FSM	ENSMUSG00000030801.11	ENSMUST00000206071.2	1014	3	1	-2109	1	2109	multi-exon	FALSE	canonical	3	295	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTTTTGTAGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	127511688	127517371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_127511915_127514399_127514475_127514550
tx.15455	chr7	-	1061	2	ISM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	3113	111	3104	-111	3prime_fragment	FALSE	canonical	3	32	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTGTCTGTGAGATGA	NA	False	NA	NA	False	NA	NA	NA	127526163	127524998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_-_127525813_127525916
tx.15456	chr7	-	1042	5	NIC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	37.3965239026303	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	NA	NA	NA	127534633	127531809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534574
tx.15457	chr7	-	1104	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	531	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	442.132106954471	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATCGTTTTTATTGTCT	NA	False	NA	NA	False	NA	NA	NA	130148580	130134252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148524
tx.1546	chr11	+	1379	4	ISM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	9247	4771	9247	-4771	3prime_fragment	FALSE	canonical	3	60	junction_1	9.89949493661167	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTTCTGCTTGGAAT	NA	False	NA	NA	False	NA	NA	NA	35669557	35677341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_35669580_35672410_35672535_35674274_35674401_35676234
tx.15460	chr7	-	2873	12	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	46	9	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	105.850978984921	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTCTTGGTAATTACA	NA	False	NA	NA	False	NA	NA	NA	133378486	133322661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133378330
tx.15461	chr7	+	1420	4	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	319.381694319926	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	138448320	138484786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_138448434_138475817_138476014_138478184_138478447_138483937
tx.15462	chr7	-	654	2	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCTGTGTGAGGGTG	NA	False	NA	NA	False	NA	NA	NA	140640765	140638351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr7_-_140638918_140640677
tx.15463	chr7	+	2314	4	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	24	0	intron_retention	FALSE	canonical	3	329	junction_3	6.79869268479038	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	140795835	140798571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_140796765_140796912_140797626_140797798_140798082_140798182
tx.15464	chr7	+	3120	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	71	0	-5	0	multi-exon	TRUE	canonical	3	69	junction_6	10.2434125173206	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	140918863	140942933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
tx.15465	chr7	+	2252	7	ISM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	426	-18	315	8	3prime_fragment	FALSE	canonical	3	276	junction_3	12.6359276140166	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGCTGACAGGACCT	NA	False	NA	NA	False	NA	NA	NA	141047760	141051394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr7_+_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
tx.15466	chr7	+	1282	8	NIC	ENSMUSG00000025511.16	novel	1466	8	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	85.0104435360979	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	3738	False	NA	NA	False	NA	NA	NA	141055399	141073340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr7_+_141055474_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
tx.15468	chr7	+	1913	3	FSM	ENSMUSG00000031073.7	ENSMUST00000033389.7	1810	3	-103	0	-103	0	multi-exon	FALSE	canonical	2	3	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTGTTCTATTCCAAG	NA	False	NA	NA	False	NA	NA	NA	144450164	144454690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr7_+_144450669_144450852_144450957_144453385
tx.15469	chr7	+	1973	5	NNC	ENSMUSG00000031072.15	novel	2015	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	37.0337683742824	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGTCTGGGATCATT	NA	False	NA	NA	False	NA	NA	NA	144468910	144474871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr7_+_144469067_144470164_144470271_144471346_144471418_144472963_144473079_144473346
tx.1547	chr11	-	2108	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	1	0	1	0	multi-exon	FALSE	canonical	3	825	junction_11	73.3093807511866	831	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	35725332	35699207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
tx.15470	chr8	+	925	6	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	10102	-3	-108	3	3prime_fragment	FALSE	canonical	3	311	junction_2	19.3742096612997	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTCTAATTTGTAACAG	NA	False	NA	NA	False	NA	NA	NA	3560558	3565235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
tx.15471	chr8	+	1285	4	ISM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	1228	0	-763	0	3prime_fragment	FALSE	canonical	3	110	junction_2	12.9700509722291	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGATTCCCCCTTTGAC	NA	False	NA	NA	False	NA	NA	NA	4304307	4306220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_4304402_4304550_4304620_4304991_4305374_4305480
tx.15472	chr8	-	2337	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	439	2967	112	-6	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGAGTTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	4374974	4338348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
tx.15473	chr8	+	2082	6	NNC	ENSMUSG00000023235.15	novel	1061	6	NA	NA	-7328	976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.88923316932641	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACACAGCATGATTGATT	585	False	NA	NA	False	NA	NA	NA	4392259	4410996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_4392376_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
tx.15474	chr8	-	1225	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	471	1501	54	0	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5726	False	NA	NA	False	NA	NA	NA	8740050	8716575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
tx.15475	chr8	-	1169	9	ISM	ENSMUSG00000056228.11	ENSMUST00000210478.2	2007	15	20291	-4	-10064	4	3prime_fragment	FALSE	canonical	3	186	junction_7	21.2940719450273	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGGGCCTATGCTGC	NA	False	NA	NA	False	NA	NA	NA	11580450	11564016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294
tx.15476	chr8	+	616	2	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGCAGCCTTGGTAT	NA	False	NA	NA	False	NA	NA	NA	12586938	12589204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_12587064_12588713
tx.15477	chr8	-	3661	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	134	2	9	0	multi-exon	TRUE	canonical	3	142	junction_11	12.9206544206397	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	12722114	12664278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
tx.15478	chr8	+	2858	13	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-34	-1	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_7	12.8344155387856	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTAGTTTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	13338155	13371395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
tx.15479	chr8	+	4252	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	410	0	-35	0	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	NA	NA	NA	18645556	18853205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
tx.1548	chr11	-	1004	2	ISM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	140058	1	13085	-1	3prime_fragment	FALSE	canonical	3	308	junction_1	0	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	NA	False	NA	NA	False	NA	NA	NA	35731296	35729227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_35730072_35731136
tx.15480	chr8	+	1212	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	7	335	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	409.767684860038	15	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	NA	NA	NA	20016472	20046223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20045732
tx.15483	chr8	-	3210	12	NIC	ENSMUSG00000031557.17	novel	5176	12	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	41.1584320513503	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	8173	False	NA	NA	False	NA	NA	NA	25581364	25530848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25581298
tx.15484	chr8	-	2565	6	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	42703	65	32064	-65	3prime_fragment	FALSE	canonical	3	139	junction_1	9.98799279134702	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCTTCTTTCTCTTTCT	6874	False	NA	NA	False	NA	NA	NA	25549298	25530920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149
tx.15485	chr8	-	2140	3	ISM	ENSMUSG00000031489.16	ENSMUST00000081438.10	2795	4	1013	0	8	0	3prime_fragment	FALSE	canonical	1	3	junction_1	62.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	NA	False	NA	NA	NA	27718603	27715803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_27716557_27716753_27716822_27717284
tx.15486	chr8	+	2022	5	ISM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	-1	4909	-1	-4909	5prime_fragment	FALSE	canonical	3	141	junction_1	15.352117117844	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCAAGGCTGGGTGGGCA	NA	False	NA	NA	False	NA	NA	NA	31640341	31646173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805
tx.15487	chr8	-	856	7	NNC	ENSMUSG00000031516.12	novel	1249	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_2	140.748495156747	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	NA	False	NA	NA	NA	34575612	34557573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_34557997_34559664_34559750_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
tx.15488	chr8	+	974	3	ISM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	13228	-2	9310	2	3prime_fragment	FALSE	canonical	3	223	junction_1	44.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTTTCGTGTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	34634944	34638001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_34635012_34635610_34635766_34637249
tx.15489	chr8	-	2213	12	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	82.870206192456	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCATTTTATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	41087824	41004135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41087740
tx.1549	chr11	-	1818	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	131	0	-15	0	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	40583470	40570140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
tx.15490	chr8	+	1132	5	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_4	30.2572305408145	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTATGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	43806966	43824716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_+_43807091_43809132_43809201_43811094_43811168_43818030_43818205_43824023
tx.15491	chr8	-	1843	5	ISM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	50	19427	-49	21	5prime_fragment	FALSE	canonical	3	34	junction_3	2.95803989154981	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCTTTATCAGGCCAAC	NA	False	NA	NA	False	NA	NA	NA	54092050	54059328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
tx.15492	chr8	-	3630	12	NNC	ENSMUSG00000004319.16	novel	5684	12	NA	NA	-10218	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	65.6371191092257	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGTTAATATTGCACAT	NA	False	NA	NA	False	NA	NA	NA	61418485	61364955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61418315
tx.15493	chr8	-	2232	3	NIC	ENSMUSG00000092260.8	novel	2291	4	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	6.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTTGGAAAAGGTATC	9669	False	NA	NA	False	NA	NA	NA	70202615	70194289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_70196261_70197110_70197238_70202481
tx.15494	chr8	+	1630	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5759	0	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_1	79.2668554630496	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	481	False	NA	NA	False	NA	NA	NA	70611189	70620138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
tx.15495	chr8	+	1400	2	FSM	ENSMUSG00000109523.2	ENSMUST00000207684.2	1349	2	-56	5	-56	-5	multi-exon	FALSE	canonical	3	32	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATTGCGTTGGCGCAG	5062	False	NA	NA	False	NA	NA	NA	70782410	70784232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_70782927_70783348
tx.15496	chr8	-	3120	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	-83	-46	-20	-3	multi-exon	FALSE	canonical	3	54	junction_2	2	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCAGTGTGACCTGTGC	NA	False	NA	NA	False	NA	NA	NA	70929638	70902871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_70905670_70908115_70908299_70929499
tx.15497	chr8	+	1336	5	FSM	ENSMUSG00000031840.15	ENSMUST00000034301.12	1363	5	0	27	0	-27	multi-exon	FALSE	canonical	3	41	junction_1	7.43303437365925	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTGGCCCAGCCCCTG	NA	False	NA	NA	False	NA	NA	NA	71207359	71211254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_71207513_71208502_71208731_71209093_71209213_71209783_71209909_71210543
tx.15498	chr8	+	771	3	ISM	ENSMUSG00000019261.4	ENSMUST00000213083.2	4635	5	8933	0	3108	0	3prime_fragment	FALSE	canonical	3	276	junction_1	27	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	-23	True	NA	NA	False	NA	NA	NA	71367569	71370173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_71367639_71368994_71369219_71369695
tx.15499	chr8	+	2834	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	1	37	junction_11	40.1631222502545	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022242	72039352	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
tx.155	chr1	-	2358	4	FSM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	-4	-302	-4	302	multi-exon	FALSE	canonical	3	14	junction_1	26.1576417557513	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTATTAAATTTCTG	NA	False	NA	NA	False	NA	NA	NA	57416707	57398078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_57399823_57401724_57401923_57414406_57414679_57416563
tx.1550	chr11	-	1809	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	244	0	28	0	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	368	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	40585786	40570140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
tx.15500	chr8	+	3553	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	206	250	-50	-250	multi-exon	TRUE	canonical	3	153	junction_6	28.4113052926296	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCGCGGTTGTCAGC	NA	False	NA	NA	False	NA	NA	NA	72129145	72140950	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
tx.15501	chr8	+	1461	6	ISM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	238	8162	-18	88	5prime_fragment	FALSE	canonical	3	211	junction_4	16.5939748101532	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCACTACACCCAGCTACT	NA	False	NA	NA	False	NA	NA	NA	72129177	72133038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202
tx.15502	chr8	+	2931	4	NNC	ENSMUSG00000066880.16	novel	769	4	NA	NA	202	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.5358352374178	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	72676897	72688474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_72677029_72682045_72682173_72682981_72683043_72685862
tx.15503	chr8	+	1562	3	NNC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	-17	-8491	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	25	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCTGAAAGGTGATGAA	NA	False	NA	NA	False	NA	NA	NA	73197706	73204004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_73197834_73198593_73199315_73203290
tx.15504	chr8	-	3708	18	FSM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	85	-147	-6	6	multi-exon	FALSE	canonical	3	416	junction_13	64.9317448394025	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	NA	False	NA	NA	NA	73228985	73214326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
tx.15505	chr8	-	2464	11	NIC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	-79	4	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	23.2381152419898	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTACGTGTCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	78337406	78322606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731_78336949_78337290
tx.15506	chr8	-	1443	4	ISM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	429	77543	429	-77543	5prime_fragment	FALSE	canonical	2	10	junction_2	1.24721912892465	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGATGATGTCATGTCG	4735	False	NA	NA	False	NA	NA	NA	80784206	80770024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_80770777_80771679_80771837_80778056_80778250_80783865
tx.15507	chr8	-	3012	14	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	19692	1436	-2226	-1436	3prime_fragment	FALSE	canonical	3	1409	junction_7	113.528402723072	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTTTCTTTCCATTT	NA	False	NA	NA	False	NA	NA	NA	81446434	81426571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206
tx.15508	chr8	-	4300	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	14	5	14	-5	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCCTTTCTGTGGATG	8184	False	NA	NA	False	NA	NA	NA	84059101	84039655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
tx.15509	chr8	+	1208	4	ISM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	1440	-6	517	6	3prime_fragment	FALSE	canonical	3	529	junction_1	19.7709101684492	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTTCTGTATGGAGG	2508	False	NA	NA	False	NA	NA	NA	84725569	84727044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_84725870_84725952_84726050_84726144_84726257_84726345
tx.1551	chr11	-	3544	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	157.1472239653	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCAATCAGTGATTAATT	NA	False	NA	NA	False	NA	NA	NA	40624243	40592219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
tx.15510	chr8	-	2630	14	FSM	ENSMUSG00000005465.10	ENSMUST00000005601.9	2664	14	32	2	12	-2	multi-exon	FALSE	canonical	3	16	junction_12	6.10848667572056	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGCCAGAGTGCCTTA	5291	False	NA	NA	False	NA	NA	NA	84769186	84756924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_84757822_84757941_84758051_84758147_84758239_84758645_84758772_84760579_84760739_84760820_84760923_84762713_84762903_84762991_84763176_84765924_84765999_84766106_84766264_84767302_84767461_84767560_84767719_84768715_84768834_84769078
tx.15511	chr8	+	1664	6	NNC	ENSMUSG00000003812.14	novel	1715	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	7	junction_1	33.7970412906219	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGACTTGAATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	85635281	85638098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_85635500_85635571_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
tx.15514	chr8	-	2104	10	NIC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	11	2	combination_of_known_junctions	TRUE	canonical	3	8	junction_8	139.134183390187	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTTAAATAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	91860640	91850194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856472_91857668_91857781_91860527
tx.15515	chr8	-	1276	11	NNC	ENSMUSG00000031667.17	novel	2200	11	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_9	165.560985742415	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATCAGTGTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	91860664	91851092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_91851310_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
tx.15516	chr8	-	727	2	FSM	ENSMUSG00000031755.7	ENSMUST00000170208.2	491	2	-45	-191	-45	1	multi-exon	FALSE	canonical	3	32	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTTGTTTATAAATTA	5585	False	NA	NA	False	NA	NA	NA	94796886	94794580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_94795011_94796589
tx.15517	chr8	+	1620	3	NNC	ENSMUSG00000033313.12	novel	1901	3	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTCCTGTGATCTCGAG	1530	False	NA	NA	False	NA	NA	NA	105991279	105995952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_+_105991393_105993601_105993798_105994641
tx.15518	chr8	+	1027	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	277	1872	277	-1872	multi-exon	FALSE	canonical	2	9	junction_3	2.05480466765633	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGGTGAGCGTGGGTCT	NA	False	NA	NA	False	NA	NA	NA	106003048	106006699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
tx.15519	chr8	-	2271	8	FSM	ENSMUSG00000014837.16	ENSMUST00000171788.8	3552	8	10	1271	10	1	multi-exon	FALSE	canonical	3	15	junction_6	10.3628063333269	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTTGGGTGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	106016150	106008312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400_106015798_106016035
tx.1552	chr11	-	3905	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	-13	0	-13	0	multi-exon	FALSE	canonical	3	534	junction_10	59.4855104336938	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	NA	False	NA	NA	NA	40624262	40592221	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
tx.15520	chr8	+	2455	20	FSM	ENSMUSG00000014791.11	ENSMUST00000109375.4	3189	20	-49	783	-41	0	multi-exon	FALSE	canonical	2	9	junction_11	6.90778195396653	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTTAAATCAGCTC	NA	False	NA	NA	False	NA	NA	NA	106032191	106036609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
tx.15521	chr8	-	1482	8	ISM	ENSMUSG00000014778.11	ENSMUST00000014922.5	3928	22	16180	-3	-207	3	3prime_fragment	FALSE	canonical	2	3	junction_2	1.90595200916091	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTTCTCTTCTTTAAA	832	False	NA	NA	False	NA	NA	NA	106058405	106055791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_106056112_106056200_106056402_106056478_106056642_106056726_106056920_106057018_106057210_106057760_106057923_106058001_106058122_106058273
tx.15522	chr8	-	2251	4	FSM	ENSMUSG00000013150.16	ENSMUST00000155038.3	951	4	3	-1303	3	1303	multi-exon	FALSE	canonical	2	4	junction_2	11.1455023315337	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACATCATGGTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	106485259	106442745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_106444283_106449480_106449677_106454619_106454964_106485085
tx.15523	chr8	+	3252	10	NIC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	21	167	intron_retention	FALSE	canonical	2	6	junction_1	156.073186377971	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGCAAGAGGCCTGG	1882	False	NA	NA	False	NA	NA	NA	106895538	106924644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_106895833_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
tx.15524	chr8	-	2756	2	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTTGCCTTGGTCGTG	NA	False	NA	NA	False	NA	NA	NA	108408925	108404232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr8_-_108406853_108408789
tx.15525	chr8	-	482	3	ISM	ENSMUSG00000033732.11	ENSMUST00000212515.2	2957	13	-13	18361	-13	-2228	5prime_fragment	FALSE	canonical	3	689	junction_2	52	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTTTGAGAAAATTCAC	NA	False	NA	NA	False	NA	NA	NA	111573432	111569427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_111569647_111571094_111571232_111573306
tx.15526	chr8	-	872	8	NNC	ENSMUSG00000015023.8	novel	731	7	NA	NA	4	54	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	157.485081897963	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGTGTCATGGGCT	7690	False	NA	NA	False	NA	NA	NA	111724428	111707050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_111707300_111707622_111707726_111710212_111710306_111715171_111715233_111716105_111716242_111717108_111717160_111719688_111719738_111724298
tx.15527	chr8	-	1379	10	FSM	ENSMUSG00000031816.16	ENSMUST00000139782.8	1366	10	-18	5	-1	-5	multi-exon	FALSE	canonical	2	6	junction_9	24.8282992660481	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTGCTTGTATGT	NA	False	NA	NA	False	NA	NA	NA	121835067	121824300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121834932
tx.15528	chr8	-	1036	4	ISM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	30014	17	2044	3	3prime_fragment	FALSE	canonical	3	159	junction_2	21.6384431561566	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCTTTCTTCTACAGA	NA	False	NA	NA	False	NA	NA	NA	122526294	122523068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186
tx.15529	chr8	-	1483	5	NNC	ENSMUSG00000025317.8	novel	1249	7	NA	NA	3399	683	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	38.4081697038534	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGAACAAATAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	122650814	122642181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505_122650602_122650711
tx.1553	chr11	-	1995	14	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	-4	6176	-4	-6176	5prime_fragment	FALSE	canonical	3	534	junction_6	64.2459217502439	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTAAGTCAGGCTAG	NA	False	NA	NA	False	NA	NA	NA	40624253	40598397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
tx.15530	chr8	+	1745	15	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	0	3	combination_of_known_junctions	TRUE	canonical	1	1	junction_4	37.5312794716022	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8862	False	NA	NA	False	NA	NA	NA	123202881	123208486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123204000_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
tx.15531	chr8	+	2246	10	FSM	ENSMUSG00000015016.9	ENSMUST00000212790.2	2171	10	-73	-2	0	2	multi-exon	FALSE	canonical	3	16	junction_1	7.64489662745314	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACCTGTGAGCTGTGAG	9534	False	NA	NA	False	NA	NA	NA	123502243	123544621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr8_+_123502368_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
tx.15532	chr8	+	1516	4	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-23	18129	-23	-4151	5prime_fragment	FALSE	canonical	3	684	junction_2	44.783429475148	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	7472	False	NA	NA	False	NA	NA	NA	124204618	124212526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341
tx.15533	chr8	-	1703	14	ISM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	11	8654	0	-448	5prime_fragment	FALSE	canonical	3	213	junction_10	81.4508963775725	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGCCTCCAGTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	125448711	125406727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
tx.15534	chr8	+	1610	2	ISM	ENSMUSG00000025812.19	ENSMUST00000159940.2	746	4	23354	-1084	23354	-38	3prime_fragment	FALSE	canonical	3	82	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAACCTTGAGCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	128329558	128338413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr8_+_128329668_128336912
tx.15535	chr9	+	2693	11	ISM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	-1	-28	1	7	intron_retention	FALSE	canonical	3	217	junction_9	145.489381055801	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTCTGGAGTTTCTA	9117	False	NA	NA	False	NA	NA	NA	15217554	15228294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678
tx.15536	chr9	-	1687	9	FSM	ENSMUSG00000060510.15	ENSMUST00000068296.8	2266	9	-32	611	-23	-611	multi-exon	FALSE	canonical	3	22	junction_8	12.1140414395857	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATGTGGGAAAGCCTTC	NA	False	NA	NA	False	NA	NA	NA	20432736	20410971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432650
tx.15537	chr9	-	1203	5	NIC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-12	2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	41.5774878991023	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTTACTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	21042496	21034752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_21035437_21036159_21036278_21038419_21038640_21039855_21040008_21042467
tx.15538	chr9	+	2262	9	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	7	4025	4	2	intron_retention	FALSE	canonical	3	441	junction_8	36.9492895736846	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGGCGTTGTTGACA	8641	False	NA	NA	False	NA	NA	NA	21176595	21185043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086
tx.15539	chr9	-	1138	9	ISM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	-14	7286	-14	292	5prime_fragment	FALSE	canonical	3	103	junction_7	9.65336728815391	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTACGATTACTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	21199279	21192038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
tx.1554	chr11	-	1401	10	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	11	13017	5	6491	5prime_fragment	FALSE	canonical	3	534	junction_2	71.1602260942008	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTGTGATGATTTTAC	NA	False	NA	NA	False	NA	NA	NA	40624238	40605238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
tx.15540	chr9	+	3512	21	FSM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	0	-2	0	0	multi-exon	FALSE	canonical	2	185	junction_20	132.122244531343	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5866	False	NA	NA	False	NA	NA	NA	21336227	21418436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
tx.15541	chr9	-	3043	22	ISM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	-4	5671	-4	-5671	5prime_fragment	FALSE	canonical	3	152	junction_8	19.8113552266968	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAGTTTATGTGTACAT	6269	False	NA	NA	False	NA	NA	NA	21763918	21741212	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
tx.15542	chr9	+	3346	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	36	0	20	0	multi-exon	FALSE	canonical	3	30	junction_1	13.43515542748	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	NA	False	NA	NA	NA	22387046	22799576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
tx.15545	chr9	-	1539	6	NNC	ENSMUSG00000049073.8	novel	1879	2	NA	NA	-109696	-74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.33172990899	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTATTGCTAATTGTG	NA	False	NA	NA	False	NA	NA	NA	40151176	40038293	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_40039350_40063206_40063277_40071322_40071459_40108832_40108959_40121021_40121120_40151123
tx.15546	chr9	-	2247	5	FSM	ENSMUSG00000032018.15	ENSMUST00000217513.2	703	5	-56	-1488	-55	624	multi-exon	TRUE	canonical	2	2	junction_4	78.337411241373	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTTTGTGCATTGGGGT	NA	False	NA	NA	False	NA	NA	NA	42175607	42165404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42175501
tx.15547	chr9	-	2796	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5497	6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	21.2895057611856	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAGAGGAGTGTTTTAT	5118	False	NA	NA	False	NA	NA	NA	43111555	43035227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43111185
tx.15548	chr9	+	976	4	ISM	ENSMUSG00000032012.10	ENSMUST00000034510.9	5653	6	48032	3448	-2105	-1862	3prime_fragment	FALSE	canonical	3	13	junction_3	3.39934634239519	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCGCCTTCTGGAGCC	NA	False	NA	NA	False	NA	NA	NA	43703312	43715310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_43703477_43703744_43703863_43705386_43705539_43714768
tx.15549	chr9	+	1998	8	FSM	ENSMUSG00000032114.10	ENSMUST00000165839.3	2086	8	88	0	81	0	multi-exon	FALSE	canonical	3	14	junction_1	6.22044030202207	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGGCTCATCCTTT	NA	False	NA	NA	False	NA	NA	NA	44309560	44314263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
tx.1555	chr11	+	1577	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	1401	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	40624493	40630873	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
tx.15550	chr9	-	1358	10	NIC	ENSMUSG00000043923.9	novel	1080	11	NA	NA	-25	0	intron_retention	FALSE	canonical	3	36	junction_5	10.0995049383621	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCTGATTGAACCTG	8915	False	NA	NA	False	NA	NA	NA	44329361	44321459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
tx.15551	chr9	-	2378	2	NIC	ENSMUSG00000038717.10	novel	544	3	NA	NA	-7	18	intron_retention	FALSE	canonical	3	4613	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGATTATTTTTCAGCAG	NA	False	NA	NA	False	NA	NA	NA	44832012	44823836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_44826110_44831907
tx.15552	chr9	+	440	4	ISM	ENSMUSG00000059412.8	ENSMUST00000217549.2	258	6	1118	-265	1118	0	3prime_fragment	FALSE	canonical	3	206	junction_3	6.54896090146283	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGAGTGCTTATCATTC	508	False	NA	NA	False	NA	NA	NA	45319587	45321576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_45319673_45320810_45320848_45321000_45321032_45321289
tx.15554	chr9	-	3309	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	424	-148	-15	148	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCAGTGCAGTGAGAGA	NA	False	NA	NA	False	NA	NA	NA	53578387	53528175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
tx.15555	chr9	+	859	4	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-56	29773	-56	-21230	5prime_fragment	FALSE	canonical	3	205	junction_3	10.3387082795139	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTGAGTCAGGATATT	2570	False	NA	NA	False	NA	NA	NA	54771016	54790041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602
tx.15556	chr9	+	1453	3	ISM	ENSMUSG00000032313.12	ENSMUST00000034862.5	2408	11	103363	2	97111	-2	3prime_fragment	FALSE	canonical	2	4	junction_1	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCTGGCTAGTAGAGGT	NA	False	NA	NA	False	NA	NA	NA	55337595	55345627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_55337749_55342474_55342538_55344390
tx.15557	chr9	-	1659	9	NIC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	-16	12	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	16.1704785025057	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGCAGGCTACCTA	NA	False	NA	NA	False	NA	NA	NA	57055427	57050071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_57050611_57050734_57050898_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
tx.1556	chr11	-	2551	2	ISM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	4008	0	2635	0	3prime_fragment	FALSE	canonical	3	765	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	40642130	40639378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_40641887_40642087
tx.15560	chr9	-	994	2	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTCTTCTTTAGCTTT	NA	False	NA	NA	False	NA	NA	NA	63950147	63944043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr9_-_63944481_63949590
tx.15561	chr9	+	1545	6	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	4	36390	4	-10193	5prime_fragment	FALSE	canonical	3	111	junction_4	10.3846039885977	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTTTTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	64939699	64953543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901
tx.15562	chr9	+	2347	7	NNC	ENSMUSG00000032392.12	novel	2518	6	NA	NA	-74	2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	22.6255754991264	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGTCTGTGACTGTC	NA	False	NA	NA	False	NA	NA	NA	65122352	65146502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_65122390_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
tx.15563	chr9	+	2169	13	ISM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	19	3622	-16	-3622	5prime_fragment	FALSE	canonical	3	317	junction_12	30.2833837827501	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGTGACTCATTTTG	6170	False	NA	NA	False	NA	NA	NA	65201560	65234317	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063
tx.15564	chr9	-	3050	11	ISM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	5885	-1387	5884	-10	3prime_fragment	FALSE	canonical	3	144	junction_4	26.5209351268012	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAAAAGAAGGGGTTG	NA	False	NA	NA	False	NA	NA	NA	65786453	65739050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356
tx.15565	chr9	+	1404	9	ISM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	38	20659	7	2285	5prime_fragment	FALSE	canonical	3	101	junction_3	14.6666074809412	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTAGTTAAAATAGTCT	4690	False	NA	NA	False	NA	NA	NA	69305225	69319745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483
tx.15566	chr9	+	2385	10	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_9	87.4795214131094	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTCTTAATTACCTTC	NA	False	NA	NA	False	NA	NA	NA	69896751	69915539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914324
tx.15567	chr9	+	4643	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	-18	0	0	0	multi-exon	FALSE	canonical	3	179	junction_9	20.3906969292862	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	NA	False	NA	NA	NA	70114631	70307048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
tx.15569	chr9	-	974	10	NIC	ENSMUSG00000090626.10	novel	1264	11	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	69.9032841560571	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGTGAAATAAACAGAAT	7866	False	NA	NA	False	NA	NA	NA	72399253	72368382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_72368561_72369137_72369273_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
tx.1557	chr11	-	3472	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	40	0	40	0	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	235	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	40646098	40639378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
tx.15570	chr9	+	585	3	NNC	ENSMUSG00000110919.2	novel	348	3	NA	NA	-48	460	at_least_one_novel_splicesite	FALSE	canonical	3	3031	junction_2	19711.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGCGTCGTCATTA	NA	False	NA	NA	False	NA	NA	NA	78152783	78153877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_78152947_78153027_78153212_78153639
tx.15571	chr9	+	1024	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_3	8.87411967464942	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTCACATACATAGCAT	NA	False	NA	NA	False	NA	NA	NA	88948976	88958332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957256_88957340_88957565
tx.15572	chr9	+	1735	12	NNC	ENSMUSG00000041440.19	novel	2815	16	NA	NA	0	-17017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	20.9840553400051	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	96001414	96038501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96037918
tx.15573	chr9	+	2996	19	ISM	ENSMUSG00000037286.16	ENSMUST00000146934.8	2885	23	42413	-572	-2145	0	3prime_fragment	FALSE	canonical	3	363	junction_3	29.6233558172693	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	NA	False	NA	NA	NA	100769515	100839459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
tx.15574	chr9	+	4273	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	53	2	53	-2	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	102594919	102610615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
tx.15575	chr9	+	2692	5	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-39	0	intron_retention	FALSE	canonical	3	19	junction_1	18.0138835346518	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	NA	NA	NA	105272551	105282666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105280594_105280791_105282197
tx.15576	chr9	+	2738	6	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-26	0	intron_retention	FALSE	canonical	3	19	junction_1	19.6916225842362	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	NA	NA	NA	105272564	105282666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
tx.15577	chr9	-	2682	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-8	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.0594746552762	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGATTCCTGGGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	107166986	107132130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_-_107132540_107132578_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
tx.15578	chr9	+	1120	2	ISM	ENSMUSG00000010051.16	ENSMUST00000144392.2	1332	3	-33	868	-1	-868	5prime_fragment	FALSE	canonical	3	34	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGAGTATTACAATCTT	NA	False	NA	NA	False	NA	NA	NA	107454155	107455749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_107454278_107454751
tx.15579	chr9	+	3504	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	156.074429359841	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGCAGTGTGTGGCAT	NA	False	NA	NA	False	NA	NA	NA	108225086	108269725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108268178_108268268_108268877
tx.1558	chr11	-	680	5	FSM	ENSMUSG00000020415.17	ENSMUST00000121638.8	948	5	281	-13	281	3	multi-exon	FALSE	canonical	3	8449	junction_1	727.283129186976	1456	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	NA	False	NA	NA	NA	43316509	43311087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409
tx.15580	chr9	+	1144	4	FSM	ENSMUSG00000032611.10	ENSMUST00000035234.6	1101	4	-43	0	-14	0	multi-exon	FALSE	canonical	3	7	junction_3	2.62466929133727	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGTTTATTACCTGGG	5912	False	NA	NA	False	NA	NA	NA	108269989	108274969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_108270059_108270433_108270839_108272492_108272585_108274391
tx.15582	chr9	+	1241	4	NIC	ENSMUSG00000032599.13	novel	1199	4	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	53.6304225437598	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGTAGTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	108660981	108675193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_+_108661070_108673262_108673596_108673739_108673772_108674405
tx.15583	chr9	+	3249	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	383	0	22	0	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	109705029	109722963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
tx.15584	chr9	+	2607	24	ISM	ENSMUSG00000032481.18	ENSMUST00000200237.5	3078	25	8	7818	8	-108	5prime_fragment	FALSE	canonical	3	1144	junction_15	77.9669601876806	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGAAAGCGATGCCGG	2510	False	NA	NA	False	NA	NA	NA	109961112	110035113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066
tx.15585	chr9	-	2051	8	ISM	ENSMUSG00000056167.9	ENSMUST00000216785.2	1723	10	10	4362	6	3378	5prime_fragment	FALSE	canonical	3	407	junction_1	42.6906289004785	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCTTAAATTGCCTATA	NA	False	NA	NA	False	NA	NA	NA	114469242	114450957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_-_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
tx.15586	chr9	+	2725	20	FSM	ENSMUSG00000038775.15	ENSMUST00000051386.13	2909	20	-9	193	-9	0	multi-exon	TRUE	canonical	2	4	junction_1	8.09945109456443	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	4698	False	NA	NA	False	NA	NA	NA	118881836	118900394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr9_+_118881897_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
tx.15587	chr9	+	1381	3	ISM	ENSMUSG00000006932.18	ENSMUST00000163844.8	2222	14	7537	-988	891	-1	3prime_fragment	FALSE	canonical	3	713	junction_2	6.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGTCATTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	120786823	120789571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr9_+_120786947_120787657_120787719_120788374
tx.15588	chr9	-	2985	25	NIC	ENSMUSG00000040936.16	novel	4629	34	NA	NA	0	42	combination_of_known_junctions	TRUE	canonical	3	18	junction_8	5.47579902845238	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCCTGATAATGTATT	NA	False	NA	NA	False	NA	NA	NA	121106263	120985874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086488_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
tx.15589	chr9	+	1329	11	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-282	1097	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_3	32.5799017800852	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	124197646	124202493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr9_+_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
tx.1559	chr11	+	2780	17	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	-7	-946	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	NA	False	NA	NA	NA	43324563	43337862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
tx.15590	chrUn_JH584304v1	-	2964	6	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	279.918988280538	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	59029	52668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563
tx.15591	chrX	-	1784	2	FSM	ENSMUSG00000073293.5	ENSMUST00000103006.4	1775	2	-19	10	-19	-10	multi-exon	FALSE	canonical	3	9	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGAAATGCTGGAGTC	NA	False	NA	NA	False	NA	NA	NA	6085088	6080759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_6081851_6084395
tx.15592	chrX	+	1462	2	NNC	ENSMUSG00000031144.16	novel	2591	7	NA	NA	5228	-10	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTAGTCGTCCCGGCTC	NA	False	NA	NA	False	NA	NA	NA	7515375	7519485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_7515428_7518075
tx.15593	chrX	+	1516	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115688.8	1510	11	0	-6	0	6	multi-exon	FALSE	canonical	3	15	junction_8	67.1240642392875	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTTGACCTCAAGG	4039	False	NA	NA	False	NA	NA	NA	7588488	7594427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593450_7593511_7593585_7593732_7593988
tx.15594	chrX	+	1729	6	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-30	614	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	62.2427505818951	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGTCATTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	20827892	20853590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_20827952_20828088_20828218_20828775_20828835_20833967_20834048_20851664_20851705_20852228
tx.15595	chrX	-	3293	10	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	389.833899418461	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	NA	False	NA	NA	NA	23231311	23085523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732_23227824_23231194
tx.15596	chrX	+	2153	5	FSM	ENSMUSG00000036699.13	ENSMUST00000115258.9	2181	5	36	-8	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATGTCTCTGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	35459592	35462811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_35459666_35459756_35459812_35460161_35460221_35460431_35460560_35460973
tx.15599	chrX	+	769	3	NIC	ENSMUSG00000095698.3	novel	685	4	NA	NA	-37	93	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	8.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	6852	False	NA	NA	False	NA	NA	NA	36675043	36679369	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_36675169_36675331_36675744_36679137
tx.156	chr1	-	950	3	ISM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	36	2968	36	-2968	5prime_fragment	FALSE	canonical	3	59	junction_2	8.5	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGGCTACACAATGCT	NA	False	NA	NA	False	NA	NA	NA	57416667	57401348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_57401923_57414406_57414679_57416563
tx.1560	chr11	+	2697	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-18	946	-3	-946	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	NA	False	NA	NA	NA	43324567	43337862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
tx.15601	chrX	+	2517	3	Genic_Genomic	ENSMUSG00000083576.2	novel	1100	1	NA	NA	-57699	366	multi-exon	FALSE	canonical	2	5	junction_1	12.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGTGGCTTACTAAA	NA	False	NA	NA	False	NA	NA	NA	61240954	61300119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chrX_+_61241476_61249243_61249365_61298244
tx.15603	chrX	-	1405	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	-42	-613	-42	613	mono-exon	FALSE	NA	NA	NA	NA	NA	4	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGGAAAATGGTGGTA	NA	False	NA	NA	False	NA	NA	NA	68649893	68648488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_68648500_68649900
tx.15604	chrX	+	3519	19	FSM	ENSMUSG00000031351.16	ENSMUST00000164800.8	3557	19	14	24	-7	-24	multi-exon	FALSE	canonical	3	40	junction_12	13.3427050397503	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATAACTTCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	72030958	72075125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
tx.15605	chrX	-	3340	22	FSM	ENSMUSG00000031389.18	ENSMUST00000064376.13	3353	22	0	13	0	-7	multi-exon	FALSE	canonical	3	19	junction_18	9.77989051592099	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACAGATTCCTGAACAT	NA	False	NA	NA	False	NA	NA	NA	72954936	72937970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
tx.15606	chrX	-	2034	18	ISM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-27	8805	-11	1653	5prime_fragment	FALSE	canonical	3	125	junction_17	13.834163619279	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTAGACTCTTCTTATT	NA	False	NA	NA	False	NA	NA	NA	84820270	84754347	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_-_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
tx.15607	chrX	+	2340	8	NNC	ENSMUSG00000079508.9	novel	784	9	NA	NA	7	-12893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	161.293749009029	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGCATGTGTCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	93410729	93447674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93445925
tx.15608	chrX	+	1650	3	NIC	ENSMUSG00000071723.8	novel	1925	5	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	4	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTGGTCATAATTTT	4264	False	NA	NA	False	NA	NA	NA	93679682	93686853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_93680182_93684531_93685195_93686365
tx.15609	chrX	+	880	4	NIC	ENSMUSG00000086629.9	novel	747	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	5.09901951359278	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTGTAACAGACAATGA	NA	False	NA	NA	False	NA	NA	NA	107878269	107930503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_107878380_107879871_107879962_107915077_107915205_107929950
tx.1561	chr11	+	2199	12	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	1808	946	1776	-946	3prime_fragment	FALSE	canonical	3	210	junction_10	23.3659355076736	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	NA	False	NA	NA	NA	43329977	43337862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
tx.15610	chrX	+	2407	3	FSM	ENSMUSG00000079450.12	ENSMUST00000113343.8	3301	3	59	835	0	-835	multi-exon	FALSE	canonical	1	1	junction_2	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAATTATTCATTTAAA	NA	False	NA	NA	False	NA	NA	NA	122013250	122054513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_122013335_122027150_122027267_122052306
tx.15611	chrX	+	3843	5	FSM	ENSMUSG00000094004.8	ENSMUST00000180198.2	3836	5	0	-7	0	7	multi-exon	FALSE	canonical	3	42	junction_2	73.5272058492637	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	134274032	134284149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_134274160_134274357_134274477_134278675_134278976_134280276_134280862_134281437
tx.15612	chrX	+	914	8	NNC	ENSMUSG00000084330.2	novel	434	5	NA	NA	-2224	5369	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	2.61080955464244	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTGAGTTGCACTTT	NA	False	NA	NA	False	NA	NA	NA	134625522	134635592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_134625674_134627458_134627605_134628012_134628123_134628832_134628921_134629024_134629068_134629492_134629566_134635168_134635227_134635347
tx.15613	chrX	+	2758	3	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	-26	5	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	31	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTCCAGTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	134643455	134648076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_134643728_134645247_134645325_134645667
tx.15614	chrX	+	3777	7	NIC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	0	1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	54.6669207311169	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCTTCTTCACTTTAAA	NA	False	NA	NA	False	NA	NA	NA	134739782	134745480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
tx.15615	chrX	-	1759	7	FSM	ENSMUSG00000044348.15	ENSMUST00000125747.8	1737	7	-11	-11	-11	11	multi-exon	FALSE	canonical	0	0	junction_6	13.5359603361646	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAGTTTATTCATTTAA	NA	False	NA	NA	False	NA	NA	NA	135938792	135903519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099_135933250_135938678
tx.15616	chrX	+	2046	7	NNC	ENSMUSG00000094378.8	novel	2029	7	NA	NA	-4943	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	5.27309733985213	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	148562525	148609690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_148562635_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
tx.15619	chrX	+	2117	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	51	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_3	67.8576942333489	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3233	False	NA	NA	False	NA	NA	NA	151923033	151954939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
tx.1562	chr11	-	1127	7	ISM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	2791	-6	2791	6	3prime_fragment	FALSE	canonical	3	649	junction_5	60.272759647751	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTATGTTGTTAATTT	NA	False	NA	-101	True	NA	NA	NA	43636018	43620829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911
tx.15620	chrX	+	2186	11	FSM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	72	0	66	0	multi-exon	FALSE	canonical	3	216	junction_4	30.0765689532566	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3248	False	NA	NA	False	NA	NA	NA	151923048	151954939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
tx.15621	chrX	+	1329	2	FSM	ENSMUSG00000046550.9	ENSMUST00000049999.9	1309	2	-22	2	-22	-2	multi-exon	FALSE	canonical	3	21	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAGTCATCTAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	152615266	152617237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_+_152615545_152616186
tx.15622	chrX	+	3559	12	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	153	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	202.540354105848	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	NA	False	NA	NA	NA	158309836	158376077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
tx.15623	chrX	-	3625	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	92	-2	92	2	multi-exon	FALSE	canonical	3	54	junction_9	58.6501491899211	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTGTATTATTCT	NA	False	NA	NA	False	NA	NA	NA	161612358	161561912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
tx.15624	chrX	+	2085	5	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	59.8351903147303	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGAATGACTTCTT	NA	False	NA	NA	False	NA	NA	NA	162692136	162712547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162711021
tx.15625	chrX	+	1297	6	ISM	ENSMUSG00000031382.15	ENSMUST00000033755.6	1369	7	7597	-16	7597	10	3prime_fragment	FALSE	canonical	1	1	junction_1	1.62480768092719	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTGTATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	163228650	163242176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chrX_+_163228805_163233450_163233559_163235894_163236046_163237383_163237519_163238792_163238985_163241619
tx.15626	chrX	-	2389	13	NNC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	-12	7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	14.8237328482254	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGTTTTGCTCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	167456906	167437105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrX_-_167437965_167439677_167439732_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
tx.15627	chrY	+	448	4	NNC	ENSMUSG00000096768.9	novel	774	4	NA	NA	29	5937	intron_retention	FALSE	canonical	0	0	junction_1	935.207285400764	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	4154	False	NA	NA	False	NA	NA	NA	90796208	90833671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chrY_+_90796288_90796858_90796989_90804564_90804687_90833554
tx.1563	chr11	-	1466	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-22	-6	4	6	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	721	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTATGTTGTTAATTT	NA	False	NA	NA	False	NA	NA	NA	43638831	43620829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
tx.1564	chr11	-	2069	11	NNC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	9	7	intron_retention	FALSE	canonical	2	8	junction_10	71.3344236676795	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTATAATGTCTCAA	NA	False	NA	NA	False	NA	NA	NA	44361316	44345390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357822_44361254
tx.1565	chr11	-	1615	7	ISM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	5043	2	-1430	0	3prime_fragment	FALSE	canonical	3	188	junction_5	17.6202219685855	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	False	NA	NA	False	NA	NA	NA	44356282	44345399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191
tx.1566	chr11	-	2084	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	2	2	2	0	multi-exon	FALSE	canonical	2	61	junction_9	50.7897627480184	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	False	NA	NA	False	NA	NA	NA	44361323	44345399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
tx.1567	chr11	-	1230	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	0	1020	0	-1020	multi-exon	FALSE	canonical	3	110	junction_3	12.8	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGGAGTCATTTTTAG	6301	False	NA	NA	False	NA	NA	NA	45846321	45838689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
tx.1568	chr11	-	820	2	FSM	ENSMUSG00000069899.4	ENSMUST00000154156.2	784	2	-21	-15	-21	1	multi-exon	FALSE	canonical	3	114	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGACAGAGAGAGAGAGAAA	1766	False	NA	NA	False	NA	NA	NA	45943169	45942179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_45942889_45943058
tx.1569	chr11	+	1229	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	-30	-6	-3	6	multi-exon	FALSE	canonical	3	177	junction_1	179.5	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCATTCTTGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46327748	46332360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_46327837_46330632_46330803_46331389
tx.157	chr1	-	1235	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	610	2	-20	1	multi-exon	FALSE	canonical	3	47	junction_6	29.7341966257639	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTGGTGGAGTGGCCGT	NA	False	NA	NA	False	NA	NA	NA	57445650	57427397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
tx.1570	chr11	+	1053	2	FSM	ENSMUSG00000020397.16	ENSMUST00000152119.2	381	2	0	-672	0	3	multi-exon	FALSE	canonical	3	22	junction_1	0	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTCATTCTTGGAAAA	NA	False	NA	NA	False	NA	NA	NA	46327751	46332357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_46327837_46331389
tx.1571	chr11	+	1434	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	-17	1130	-4	64	multi-exon	FALSE	canonical	3	262	junction_1	137	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTGAAATTATAAAATGT	NA	False	NA	NA	False	NA	NA	NA	46327783	46332418	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_46328019_46330632_46330803_46331389
tx.1572	chr11	+	1106	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	-4	345	-1	1	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	7728	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTATATGTGAGTCC	NA	False	NA	NA	False	NA	NA	NA	48691182	48696916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
tx.1573	chr11	+	2626	2	ISM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	1203	0	218	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	49136275	49153854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_49136445_49151397
tx.1574	chr11	+	2731	3	FSM	ENSMUSG00000020346.17	ENSMUST00000156607.8	633	3	238	-2336	238	0	multi-exon	TRUE	canonical	3	30	junction_1	30.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	49136295	49153854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_49136445_49142376_49142502_49151397
tx.1575	chr11	+	2976	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	-24	-5	-15	5	multi-exon	FALSE	canonical	2	320	junction_10	53.5808204583287	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTTTGAATTTAGTT	NA	False	NA	NA	False	NA	NA	NA	49684989	49729445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
tx.1576	chr11	+	1508	6	ISM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	32676	-3	32676	3	3prime_fragment	FALSE	canonical	3	375	junction_2	70.8971085447072	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGACTTGTTTGAATTTAG	4748	False	NA	NA	False	NA	NA	NA	49717689	49729443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
tx.1577	chr11	+	2036	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	111	2528	-29	583	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATGTTTTAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	49737690	49774720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
tx.1578	chr11	+	1460	9	FSM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	40	2	40	-2	multi-exon	FALSE	canonical	3	193	junction_8	44.3931300991494	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTCGCCAGCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	49916214	49995578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
tx.1579	chr11	+	899	6	ISM	ENSMUSG00000020376.18	ENSMUST00000054684.14	1415	8	45821	23	-22507	-18	3prime_fragment	FALSE	canonical	3	67	junction_5	92.4683729715193	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCGTGTTGCTAAGTATC	NA	False	NA	NA	False	NA	NA	NA	49961993	49995562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49995375
tx.158	chr1	-	1225	9	FSM	ENSMUSG00000048495.17	ENSMUST00000160837.8	766	9	-39	-420	-11	-6	multi-exon	FALSE	canonical	3	10	junction_4	49.931828526502	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGTCTATTGGTGGAG	NA	False	NA	NA	False	NA	NA	NA	57445641	57427404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57432828_57432854_57433205_57433251_57435885_57435956_57440546_57440683_57445542
tx.1580	chr11	+	1142	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCTTGCTGCTACACTC	NA	False	NA	NA	False	NA	NA	NA	50065675	50090942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
tx.1581	chr11	-	1998	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	36	3	0	-3	multi-exon	TRUE	canonical	0	0	junction_1	263.494104027287	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCCTGTGATCCGTACG	NA	False	NA	NA	False	NA	NA	NA	50101618	50090981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
tx.1582	chr11	-	1884	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	0	789	0	-3	multi-exon	FALSE	canonical	3	390	junction_1	128.516496201532	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCCTGTGATCCGTACG	NA	False	NA	NA	False	NA	NA	NA	50101618	50090981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
tx.1583	chr11	+	696	2	ISM	ENSMUSG00000097887.3	ENSMUST00000180443.3	1235	3	-4	4100	-4	-4100	5prime_fragment	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATGTTTTTTGTTTTTGT	8234	False	NA	NA	False	NA	NA	NA	50127834	50175566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_50128207_50175242
tx.1584	chr11	-	2037	3	ISM	ENSMUSG00000020368.16	ENSMUST00000146979.2	708	5	2017	-1732	958	0	3prime_fragment	FALSE	canonical	3	3898	junction_2	74	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	NA	False	NA	-39	True	NA	NA	NA	50188188	50185293	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_50187163_50187884_50187965_50188100
tx.1585	chr11	-	3727	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_14	996.986871241829	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8148	False	NA	NA	False	NA	NA	NA	50216488	50185297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
tx.1586	chr11	-	3756	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	19	4	19	-4	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8155	False	NA	NA	False	NA	NA	NA	50216481	50185297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
tx.1587	chr11	+	2181	13	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	3	44	junction_10	144.892752483422	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	50268530	50277355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
tx.1588	chr11	+	1274	7	ISM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	5250	-1	22	0	3prime_fragment	FALSE	canonical	3	385	junction_4	39.3728614939557	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	50273795	50277355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
tx.1589	chr11	-	1893	14	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	13877	0	-2673	0	3prime_fragment	FALSE	canonical	3	52	junction_10	7.63129650783748	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGCCTCCAGCTTGCT	5548	False	NA	NA	False	NA	NA	NA	50308075	50280112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010
tx.159	chr1	-	1200	8	FSM	ENSMUSG00000048495.17	ENSMUST00000079998.13	1398	8	192	6	-11	-6	multi-exon	FALSE	canonical	3	102	junction_6	15.7025930524684	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGTCTATTGGTGGAG	NA	False	NA	NA	False	NA	NA	NA	57445641	57427404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
tx.1590	chr11	-	604	5	ISM	ENSMUSG00000049321.18	ENSMUST00000116378.8	3069	6	-19	7278	4	0	5prime_fragment	FALSE	canonical	3	29	junction_4	20.1308221391974	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTCTTTAATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	50806988	50796816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
tx.1591	chr11	+	2626	5	FSM	ENSMUSG00000020364.15	ENSMUST00000102766.10	2592	5	-32	-2	-32	2	multi-exon	FALSE	canonical	2	7	junction_3	1.29903810567666	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTCCACCTAGTTATTA	NA	False	NA	NA	False	NA	NA	NA	50950051	50962191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_50950230_50950898_50950982_50951686_50951814_50952229_50952326_50960049
tx.1592	chr11	-	1753	6	NNC	ENSMUSG00000086646.8	novel	937	5	NA	NA	-28	55141	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.80612053770501	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	51111273	51025518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_51026043_51077320_51077852_51080756_51081139_51089402_51089544_51110284_51110381_51111194
tx.1593	chr11	-	623	2	ISM	ENSMUSG00000045942.14	ENSMUST00000231433.2	855	4	1691	-148	1691	6	3prime_fragment	FALSE	canonical	2	4	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCATTTTTGTGAC	NA	False	NA	NA	False	NA	NA	NA	51145400	51144471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_51144880_51145185
tx.1594	chr11	+	1370	4	NIC	ENSMUSG00000020385.17	novel	742	7	NA	NA	14	443	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	34.3737626039914	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACAATTGTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	51153954	51163634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626
tx.1595	chr11	+	1909	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	14	4	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	39.9666527661916	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	51153954	51172597	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.1596	chr11	+	1909	13	FSM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	43	-3	-5	1	multi-exon	FALSE	canonical	3	35	junction_3	48.5840480221875	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATTGAGTATTCTT	NA	False	NA	NA	False	NA	NA	NA	51153983	51172594	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.1597	chr11	+	1825	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	35.3321898042513	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATTGAGTATTCTT	NA	False	NA	NA	False	NA	NA	NA	51153976	51172594	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_51154097_51157997_51158159_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.1598	chr11	+	1956	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	49.8634822681421	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	NA	False	NA	NA	NA	51153992	51172591	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
tx.1599	chr11	+	1855	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	32	1229	0	6	multi-exon	FALSE	canonical	3	19	junction_6	4.87054639873415	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTCTAAGACCCATCA	NA	False	NA	NA	False	NA	NA	NA	51475615	51494087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
tx.16	chr1	-	1933	2	ISM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	60	0	4	intron_retention	TRUE	canonical	3	538	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCAGTAATTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	10014343	10012243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_10012381_10012547
tx.160	chr1	+	1086	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	408	2046	-23	-2046	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	289	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGTGTTCTTTAAAGG	NA	False	NA	NA	False	NA	NA	NA	57445894	57455066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
tx.1600	chr11	-	1353	7	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	466	-302	466	-3	3prime_fragment	FALSE	canonical	3	1798	junction_2	628.220414256723	139	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGGGTAAATGTGGG	NA	False	NA	NA	False	NA	NA	NA	51497208	51491698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
tx.1601	chr11	-	746	2	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	4955	-298	4955	-7	3prime_fragment	FALSE	canonical	3	1943	junction_1	0	48	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAAGCCTGGGTAAATG	NA	False	NA	NA	False	NA	NA	NA	51492719	51491702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_51492306_51492576
tx.1602	chr11	-	1210	6	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	464	776	464	-7	3prime_fragment	FALSE	canonical	3	2171	junction_1	422.285969456718	177	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAAGCCTGGGTAAATG	NA	False	NA	NA	False	NA	NA	NA	51497210	51491702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
tx.1603	chr11	+	748	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	17	277	17	8	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	3449	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTGTGGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	51510578	51514264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
tx.1604	chr11	-	1932	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	16	-2	16	0	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	51526707	51514497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
tx.1605	chr11	-	660	3	ISM	ENSMUSG00000001054.10	ENSMUST00000147009.2	601	4	1330	-367	1330	-1	3prime_fragment	FALSE	canonical	3	275	junction_2	1.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGATTGCATGGTCTTG	NA	False	NA	NA	False	NA	NA	NA	51515331	51514498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_51514974_51515055_51515211_51515301
tx.1606	chr11	-	2369	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-28	26	-28	-26	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTCTCTGGTCTTATG	NA	False	NA	NA	False	NA	NA	NA	51541697	51533915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
tx.1607	chr11	-	823	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	-4	-6	-4	6	multi-exon	FALSE	canonical	3	574	junction_1	0	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGAATGCTTTTCCT	5180	False	NA	NA	False	NA	NA	NA	51579484	51576206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_51576920_51579374
tx.1608	chr11	-	1331	2	ISM	ENSMUSG00000036391.17	ENSMUST00000154325.2	4273	3	7189	2477	-7	-2477	3prime_fragment	FALSE	canonical	3	83	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATGGAAATTAATTTCAA	3766	False	NA	NA	False	NA	NA	NA	51647272	51633865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_51634828_51646903
tx.1609	chr11	+	1195	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	7	-1	0	1	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	377	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTGGGCAGCTGTT	3572	False	NA	NA	False	NA	NA	NA	51654520	51682753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
tx.161	chr1	-	2501	7	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	22.3737197026631	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTGACTACTTACT	NA	False	NA	NA	False	NA	NA	NA	58009298	57994406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58009179
tx.1610	chr11	+	1838	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	-4	-2	-4	2	multi-exon	FALSE	canonical	3	1066	junction_1	20	709	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGTTCAAGTTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	51858483	51868163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_51858785_51860970_51861071_51866726
tx.1611	chr11	-	1007	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	26	759	21	411	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	370	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTCACTTATTTCCT	NA	False	NA	NA	False	NA	NA	NA	51891285	51877082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
tx.1612	chr11	+	1709	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	354	5039	354	3047	multi-exon	TRUE	canonical	3	1809	junction_6	129.264586539908	725	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGGCAACTCCTTGG	NA	False	NA	NA	False	NA	NA	NA	51989861	52013566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
tx.1613	chr11	+	1228	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	28	184	0	-184	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	3629	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	439	False	NA	NA	False	NA	NA	NA	52122863	52137501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
tx.1614	chr11	-	1701	3	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGCTCTGAATGAAAAC	9403	False	NA	NA	False	NA	NA	NA	52249490	52234616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_52236052_52243249_52243343_52249317
tx.1615	chr11	+	1808	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	214	0	-61	0	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	1785	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5345	False	NA	NA	False	NA	NA	NA	52251900	52280224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
tx.1616	chr11	+	2465	3	FSM	ENSMUSG00000036275.14	ENSMUST00000109057.8	2472	3	7	0	7	0	multi-exon	FALSE	canonical	3	140	junction_1	2	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTGTTAGTGTGTT	4565	False	NA	NA	False	NA	NA	NA	52287261	52299555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_52287431_52293872_52294385_52297771
tx.1617	chr11	-	1082	8	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	30698	1757	-2518	1309	3prime_fragment	FALSE	canonical	3	1816	junction_4	182.057290825875	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCAACTTTGTTC	NA	False	NA	-64	True	NA	NA	NA	53160586	53152397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514
tx.1618	chr11	-	2599	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	262	1757	216	1309	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCAACTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	53191022	53152397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
tx.1619	chr11	+	1259	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	3	5	3	-5	multi-exon	FALSE	canonical	3	238	junction_3	30.2691628926573	140	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGAATGATGTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	53215508	53224123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
tx.162	chr1	-	2440	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	67	5	-9	0	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	NA	False	NA	NA	NA	58009220	57994411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
tx.1620	chr11	-	486	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	4	1031	4	0	multi-exon	FALSE	canonical	3	5710	junction_1	0	2215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2951	False	NA	NA	False	NA	NA	NA	53321650	53319779	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_53319978_53321362
tx.1621	chr11	-	408	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	-3	0	1	0	multi-exon	FALSE	canonical	3	885	junction_2	2412.5	403	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2944	False	NA	NA	False	NA	NA	NA	53321657	53319779	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_53319978_53321362_53321530_53321614
tx.1622	chr11	+	2285	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	3	2	3	1	multi-exon	FALSE	canonical	2	5	junction_9	19.4950915296646	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGAGAGAACTCCTTA	922	False	NA	NA	False	NA	NA	NA	53458208	53491930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
tx.1623	chr11	+	1362	9	ISM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	3	14182	3	28	5prime_fragment	FALSE	canonical	3	61	junction_1	8.55496931613434	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGGGTAAGTTTTGCTC	922	False	NA	NA	False	NA	NA	NA	53458208	53477750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661
tx.1624	chr11	+	2148	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	-11	-1	-11	1	multi-exon	FALSE	canonical	3	46	junction_1	9.82940913537621	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	False	NA	NA	False	NA	NA	NA	53660829	53668150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
tx.1625	chr11	-	1040	6	NIC	ENSMUSG00000020388.13	novel	1182	7	NA	NA	-7	3	combination_of_known_splicesites	FALSE	canonical	2	11	junction_5	88.019543284432	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTGTCTGGCCTGATAA	NA	False	NA	NA	False	NA	NA	NA	53959847	53945750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53959665
tx.1626	chr11	-	1181	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	1	0	1	0	multi-exon	FALSE	canonical	3	190	junction_5	18.9245578254523	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTAGTGTCTGGCCTGA	NA	False	NA	NA	False	NA	NA	NA	53959839	53945753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
tx.1627	chr11	+	2228	16	FSM	ENSMUSG00000018906.15	ENSMUST00000093107.12	2263	16	51	-16	0	3	multi-exon	FALSE	canonical	3	31	junction_12	14.6945190084225	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGAGTGTTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	53991800	54022494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
tx.1628	chr11	+	2223	16	FSM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	15	-8	-2	-2	multi-exon	FALSE	canonical	3	35	junction_12	14.0816665680357	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTATTTTGGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	53991803	54022486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
tx.1629	chr11	+	2554	21	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	9.20584053739798	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATATTGTACTTAATT	NA	False	NA	NA	False	NA	NA	NA	54194652	54252361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
tx.163	chr1	+	2379	7	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	44	9162	44	-9161	5prime_fragment	FALSE	canonical	3	186	junction_3	14.4539498638492	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATCGCAAGACAGAAGT	5183	False	NA	NA	False	NA	NA	NA	58035173	58055896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517
tx.1630	chr11	+	1233	9	ISM	ENSMUSG00000020333.18	ENSMUST00000127731.2	4358	10	3574	4	3574	0	3prime_fragment	FALSE	canonical	3	38	junction_7	9.16429893663449	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATATTGTACTTAATT	NA	False	NA	NA	False	NA	NA	NA	54229896	54252361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
tx.1631	chr11	+	1840	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	-11	0	-10	0	multi-exon	FALSE	canonical	3	58	junction_8	14.7082743152735	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGCTCATTATTGT	NA	False	NA	NA	False	NA	NA	NA	54413704	54525835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
tx.1632	chr11	-	2922	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-5	2	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	245.457735669504	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTGGATTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	54678506	54608279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54678385
tx.1633	chr11	-	2929	5	ISM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	31140	0	3804	0	3prime_fragment	FALSE	canonical	3	549	junction_4	42.0081837265074	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	54647361	54608281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231
tx.1634	chr11	-	3074	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	549	junction_4	66.5263857428013	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	54678506	54608281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
tx.1635	chr11	-	2771	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-12	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	267.149770727957	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGGATTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	54678513	54608278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54647231_54647386_54678385
tx.1636	chr11	-	855	3	FSM	ENSMUSG00000052298.13	ENSMUST00000136059.8	801	3	-33	-21	1	21	multi-exon	FALSE	canonical	3	549	junction_1	84	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACAAAGGATAGTGTA	NA	False	NA	NA	False	NA	NA	NA	54678500	54630790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_54631377_54647231_54647386_54678385
tx.1637	chr11	-	1652	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	315	1464	-9	-10	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCAACTACAGAGAAGT	NA	False	NA	NA	False	NA	NA	NA	54751423	54730648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
tx.1639	chr11	+	595	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	36	5	36	-5	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	2966	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGGATTTGTTACTC	NA	False	NA	NA	False	NA	NA	NA	54757244	54761322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_54757427_54760673_54760779_54761014
tx.164	chr1	+	4889	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	46	4	46	-3	multi-exon	FALSE	canonical	0	0	junction_8	80.2616813928041	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATCTATCTATTTA	5185	False	NA	NA	False	NA	NA	NA	58035175	58065054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
tx.1640	chr11	+	1464	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	130	0	-24	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	NA	False	NA	NA	NA	54793727	54801203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
tx.1641	chr11	-	1426	7	ISM	ENSMUSG00000020400.18	ENSMUST00000102730.9	2787	19	42042	0	207	0	3prime_fragment	FALSE	canonical	3	201	junction_1	35.0685835977953	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	NA	False	NA	NA	False	NA	NA	NA	54811694	54801612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586
tx.1642	chr11	-	2535	17	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	54.30350903717	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3633	False	NA	NA	False	NA	NA	NA	54846897	54801612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
tx.1643	chr11	-	2478	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	-7	0	-7	0	multi-exon	FALSE	canonical	3	220	junction_5	83.6892399827414	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	54924278	54869933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
tx.1644	chr11	-	2496	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	-7	0	-7	0	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	54924278	54869933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
tx.1645	chr11	+	2051	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	-55	2131	-55	-2131	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	54988885	55001724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
tx.1646	chr11	-	1863	7	ISM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	13315	0	-4418	0	3prime_fragment	FALSE	canonical	3	696	junction_1	26.3544219355226	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	NA	False	NA	NA	False	NA	NA	NA	55297409	55285325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335
tx.1647	chr11	-	2116	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	176	8	-4	-8	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	286	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGGCTGTCCTGTCCCG	3852	False	NA	NA	False	NA	NA	NA	55310730	55285333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
tx.1648	chr11	-	476	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	69	-4	27	4	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	1130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGGTGTATGTTCTCG	NA	False	NA	NA	False	NA	NA	NA	55351996	55337462	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
tx.1649	chr11	+	2720	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	20	3963	-13	-3963	multi-exon	TRUE	canonical	3	6361	junction_7	586.595613027527	212	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAACTTCATCTGGCA	NA	False	NA	NA	False	NA	NA	NA	55360530	55391701	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
tx.165	chr1	+	3317	3	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	19966	0	-6779	0	3prime_fragment	FALSE	canonical	0	0	junction_2	149.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATCTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	58055095	58065058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_58057143_58058747_58058902_58063942
tx.1650	chr11	+	1984	9	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	19420	4321	19387	-4321	3prime_fragment	FALSE	canonical	3	6361	junction_4	595.702723155602	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGGGAACTGTAGAATT	NA	False	NA	NA	False	NA	NA	NA	55379930	55391343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
tx.1651	chr11	+	1509	2	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	28899	3955	28866	-3955	3prime_fragment	FALSE	canonical	3	7944	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	NA	False	NA	NA	NA	55389409	55391709	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_55389494_55390284
tx.1652	chr11	-	3004	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_13	127.824121030265	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	NA	NA	NA	57409419	57373818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57408930
tx.1653	chr11	-	2469	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_12	132.513346430646	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGCGTGGTATTTAATA	NA	False	NA	NA	False	NA	NA	NA	57409464	57373820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57405030_57405118_57409398
tx.1654	chr11	-	2014	9	ISM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	11008	4	-181	-4	3prime_fragment	FALSE	canonical	3	449	junction_5	25.6746470277587	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAGCGTGGTATTTAA	NA	False	NA	NA	False	NA	NA	NA	57398435	57373822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318
tx.1655	chr11	-	2566	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAGCGTGGTATTTAA	NA	False	NA	NA	False	NA	NA	NA	57409453	57373822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
tx.1656	chr11	-	2574	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	-21	4	-21	-4	multi-exon	FALSE	canonical	3	63	junction_13	118.75144346678	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAGCGTGGTATTTAA	NA	False	NA	NA	False	NA	NA	NA	57409464	57373822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
tx.1657	chr11	+	1906	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	4	2917	4	1372	multi-exon	FALSE	canonical	3	17	junction_1	35	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAAGAGGACGAGGA	NA	False	NA	NA	False	NA	NA	NA	57409493	57421724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_57409539_57418684_57419116_57420294
tx.1658	chr11	+	1919	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	4	2916	4	1372	multi-exon	FALSE	canonical	3	62	junction_1	12.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAAGAGGACGAGGA	NA	False	NA	NA	False	NA	NA	NA	57409516	57421724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_57409575_57418684_57419116_57420294
tx.1659	chr11	-	1090	2	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57448778	57445632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_57446486_57448541
tx.166	chr1	+	2838	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	238	800	4	-800	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	600	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTATAGATCAGTCTTT	895	False	NA	NA	False	NA	NA	NA	58432294	58445712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
tx.1660	chr11	-	769	4	FSM	ENSMUSG00000087165.8	ENSMUST00000152790.8	714	4	-51	-4	-51	4	multi-exon	FALSE	canonical	3	14	junction_3	7.84573486395988	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTCAGTGATTAGCA	NA	False	NA	NA	False	NA	NA	NA	57692294	57686320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_57686621_57686851_57687000_57687137_57687224_57692059
tx.1661	chr11	-	682	3	FSM	ENSMUSG00000087165.8	ENSMUST00000140069.2	502	3	-69	-111	-50	4	multi-exon	FALSE	canonical	3	13	junction_2	6.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTCAGTGATTAGCA	NA	False	NA	NA	False	NA	NA	NA	57692293	57686320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_57686621_57686851_57687000_57692059
tx.1662	chr11	+	2063	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-219	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.973963341066	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATGAAGTGTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	57994759	58009418	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_57994846_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
tx.1663	chr11	+	2167	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-132	0	-132	0	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	342	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	57994846	58009420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
tx.1664	chr11	+	1616	5	ISM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	7183	0	-2615	0	3prime_fragment	FALSE	canonical	3	691	junction_1	19.004933569997	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	58002237	58009420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
tx.1665	chr11	+	721	7	FSM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	2	-1	2	1	multi-exon	TRUE	canonical	3	1080	junction_1	114.661821603066	414	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCATTGAATTATTG	1483	False	NA	NA	False	NA	NA	NA	58062488	58070392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
tx.1666	chr11	+	899	7	NIC	ENSMUSG00000020514.9	novel	722	7	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	483.207138698187	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCATTGAATTATTG	1484	False	NA	NA	False	NA	NA	NA	58062489	58070392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_58062540_58062619_58062848_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
tx.1667	chr11	+	2005	3	FSM	ENSMUSG00000078853.9	ENSMUST00000035266.11	2022	3	-1	18	-1	-2	multi-exon	FALSE	canonical	2	4	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTTGCCTTCATCGAT	NA	False	NA	NA	False	NA	NA	NA	58090380	58098399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_58090606_58092293_58092544_58096869
tx.1668	chr11	+	2342	10	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-26	-4	intron_retention	FALSE	canonical	3	82	junction_1	26.418755029031	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTTGGTGCTACAG	7647	False	NA	NA	False	NA	NA	NA	58197868	58205435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.1669	chr11	+	2261	11	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-26	-2	intron_retention	FALSE	canonical	3	82	junction_1	26.5083005867973	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7647	False	NA	NA	False	NA	NA	NA	58197868	58205437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.167	chr1	+	2506	9	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	6106	800	5534	-800	3prime_fragment	FALSE	canonical	3	1694	junction_8	98.0264632637534	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTATAGATCAGTCTTT	6763	False	NA	NA	False	NA	NA	NA	58438162	58445712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
tx.1670	chr11	+	1877	12	FSM	ENSMUSG00000037243.18	ENSMUST00000153510.9	1887	12	8	2	8	-2	multi-exon	FALSE	canonical	0	0	junction_6	49.3946830209872	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7681	False	NA	NA	False	NA	NA	NA	58197902	58205437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.1671	chr11	+	1939	12	FSM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-93	14	10	0	multi-exon	FALSE	canonical	0	0	junction_6	44.8549544883144	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGTGCTACAGATAT	7683	False	NA	NA	False	NA	NA	NA	58197904	58205439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
tx.1672	chr11	-	426	3	FSM	ENSMUSG00000049755.15	ENSMUST00000135097.8	426	3	-29	29	3	5	multi-exon	FALSE	canonical	3	24	junction_2	2.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAAAGTATTCAACAGTC	618	False	NA	NA	False	NA	NA	NA	58214169	58210558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_58210781_58213425_58213556_58214095
tx.1673	chr11	+	3002	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	-26	1	0	-1	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	443	False	NA	NA	False	NA	NA	NA	58221549	58238550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
tx.1674	chr11	+	2240	4	NNC	ENSMUSG00000107677.3	novel	2719	3	NA	NA	-1307	-198	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.55777733351102	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAGAAACTTTCTGAAT	1840	False	NA	NA	False	NA	NA	NA	58642252	58650299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_58642396_58643983_58644171_58647616_58647657_58648429
tx.1675	chr11	-	564	4	FSM	ENSMUSG00000049154.13	ENSMUST00000239007.2	561	4	-2	-1	-2	1	multi-exon	FALSE	canonical	3	25	junction_1	3.29983164553722	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGACTATGTCACAGAT	NA	False	NA	NA	False	NA	NA	NA	58692788	58683627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_58683826_58687380_58687485_58689461_58689522_58692586
tx.1676	chr11	+	1238	5	FSM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	15	2613	15	-2613	multi-exon	FALSE	canonical	3	20	junction_3	8.74642784226795	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGCCCAGACTCAACT	NA	False	NA	NA	False	NA	NA	NA	58758056	58771501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_58758136_58759640_58759833_58767519_58767647_58769601_58769695_58770754
tx.1677	chr11	-	3037	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	14	839	14	-839	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTCAGAGCACATTG	7198	False	NA	NA	False	NA	NA	NA	58795037	58779817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
tx.1678	chr11	+	2270	5	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.6525267016199	13	6	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1674	False	NA	NA	False	NA	NA	NA	58868926	58882284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58879756_58881012
tx.1679	chr11	+	2318	6	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.6819281990197	2	6	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGCTTATCCTGTGG	1675	False	NA	NA	False	NA	NA	NA	58868927	58882285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58878458_58878507_58879628_58879756_58881012
tx.168	chr1	-	1661	12	FSM	ENSMUSG00000026034.18	ENSMUST00000148330.8	1705	12	44	0	44	0	multi-exon	FALSE	canonical	3	65	junction_9	47.751422461613	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	58463181	58451158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
tx.1680	chr11	-	962	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	121	-5	-19	5	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	339	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACAGCCCTCCATACT	1591	False	NA	NA	False	NA	NA	NA	59082657	59074695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
tx.1681	chr11	+	677	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	17	246	4	0	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	59093334	59096714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
tx.1682	chr11	+	805	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	21	-108	5	-6	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGTCAGACTTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	59093335	59096822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
tx.1683	chr11	+	1270	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	16	-1	16	1	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTATATTATCTCGCTG	NA	False	NA	NA	False	NA	NA	NA	59099162	59101565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
tx.1684	chr11	-	1761	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	40	-1	40	-1	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	995	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGCTTGTGTGTCAGTG	1887	False	NA	NA	False	NA	NA	NA	59119056	59102238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
tx.1685	chr11	+	1293	3	FSM	ENSMUSG00000086910.2	ENSMUST00000133698.2	659	3	237	-871	237	871	multi-exon	FALSE	canonical	1	2	junction_1	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGAATATTCGGGAT	NA	False	NA	NA	False	NA	NA	NA	59266523	59271602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_59266712_59269251_59269320_59270565
tx.1686	chr11	-	1912	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	-23	7	-15	3	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGAGCCGGGTCTATA	NA	False	NA	NA	False	NA	NA	NA	59340848	59297966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
tx.1687	chr11	+	1861	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	34	2464	34	-3	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGGGAGTTCCTTTTTT	9515	False	NA	NA	False	NA	NA	NA	59340904	59346929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
tx.1688	chr11	+	1947	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	34	2370	34	-3	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGGGAGTTCCTTTTTT	9515	False	NA	NA	False	NA	NA	NA	59340904	59346929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
tx.1689	chr11	-	3408	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	0	4	0	-4	multi-exon	FALSE	canonical	2	7	junction_3	2.86744175568088	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAGAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59363300	59352026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
tx.169	chr1	-	1758	13	FSM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	38	0	38	0	multi-exon	FALSE	canonical	3	45	junction_9	59.1577458063514	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	58463187	58451158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
tx.1692	chr11	+	1454	8	ISM	ENSMUSG00000005417.18	ENSMUST00000156111.2	2236	10	4713	1	4713	-1	3prime_fragment	FALSE	canonical	3	461	junction_7	35.0544765547941	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	NA	False	NA	NA	False	NA	NA	NA	59656286	59667048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
tx.1693	chr11	+	1166	6	ISM	ENSMUSG00000005417.18	ENSMUST00000156111.2	2236	10	7270	1	7270	-1	3prime_fragment	FALSE	canonical	3	461	junction_5	38.6108792958669	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	NA	False	NA	NA	False	NA	NA	NA	59658843	59667048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
tx.1694	chr11	-	1783	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-29	-806	-26	0	multi-exon	FALSE	canonical	3	85	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCATGTCTACCTTA	NA	False	NA	NA	False	NA	NA	NA	59678497	59674722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59676052_59678043
tx.1696	chr11	-	3107	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	-12	342	-12	40	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	59700854	59682575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
tx.1697	chr11	-	1620	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	26	0	0	0	multi-exon	FALSE	canonical	3	608	junction_5	45.2577558304642	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATGTGTGTTCTCTCA	NA	False	NA	NA	False	NA	NA	NA	59730638	59708620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
tx.1698	chr11	+	1356	5	FSM	ENSMUSG00000032615.15	ENSMUST00000149076.8	1316	5	-40	0	-40	0	multi-exon	FALSE	canonical	3	8	junction_1	25.0337272494529	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	2605	False	NA	NA	False	NA	NA	NA	59730232	59767359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_59730583_59743616_59743718_59751575_59751637_59765378_59765494_59766630
tx.17	chr1	-	1705	3	ISM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	-1	-2	0	0	intron_retention	FALSE	canonical	3	144	junction_1	272	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	NA	False	NA	NA	NA	10014343	10012247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_10012375_10012547_10012617_10012834
tx.170	chr1	-	1064	7	FSM	ENSMUSG00000026035.16	ENSMUST00000114348.8	1033	7	-38	7	10	-4	multi-exon	FALSE	canonical	3	104	junction_6	35.853482707015	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACATGTGAGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	58484631	58470159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
tx.1700	chr11	+	1124	5	FSM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	182	0	151	0	multi-exon	FALSE	canonical	3	45	junction_1	9.12414379544733	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	1901	False	NA	NA	False	NA	NA	NA	59739080	59767359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765494_59766630
tx.1701	chr11	+	293	2	NNC	ENSMUSG00000085551.2	novel	274	2	NA	NA	23	7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGACGAAAGCTTGGAA	2026	False	NA	NA	False	NA	NA	NA	59812347	59812722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_59812469_59812550
tx.1702	chr11	+	826	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	12	1082	12	-1082	multi-exon	FALSE	canonical	3	425	junction_1	0	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTGTTTTGAAAGGC	NA	False	NA	NA	False	NA	NA	NA	59839043	59851949	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_59839305_59851384
tx.1704	chr11	-	973	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	-15	3	-7	-3	multi-exon	FALSE	canonical	3	19	junction_6	8.67307455417179	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTCTGGTCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	59937322	59861442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
tx.1707	chr11	-	1593	8	NIC	ENSMUSG00000042709.16	novel	949	8	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	134.352870745478	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATCTTTGGTCTAAGCA	NA	False	NA	NA	False	NA	NA	NA	60307874	60291454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307811
tx.1709	chr11	-	1801	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	8	4	-1	-4	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATCTTTGGTCTAAGC	NA	False	NA	NA	False	NA	NA	NA	60307869	60291455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
tx.171	chr1	+	1466	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	372	1931	-105	141	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	197	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	58484681	58500684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
tx.1710	chr11	+	1483	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	313	2487	313	-2487	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTTTTATGGTACCT	NA	False	NA	NA	False	NA	NA	NA	60308400	60333616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
tx.1711	chr11	+	1772	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	11	5	11	-5	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACTTAGGGAACTTGTG	NA	False	NA	NA	False	NA	NA	NA	60345427	60359575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
tx.1712	chr11	+	2515	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	7	0	7	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	60619230	60623777	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
tx.1714	chr11	-	2796	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	60	2	60	-2	multi-exon	TRUE	canonical	3	983	junction_2	78.1211180853749	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTCCTCATATTATTTA	NA	False	NA	NA	False	NA	NA	NA	60702031	60678931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
tx.1715	chr11	+	1243	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	33	277	-15	-277	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	NA	False	NA	NA	NA	60721489	60748972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
tx.1716	chr11	-	1254	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	257	0	6	0	multi-exon	FALSE	canonical	3	26	junction_1	10	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7840	False	NA	NA	False	NA	NA	NA	60769607	60755277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_60756175_60766585_60766874_60769538
tx.1717	chr11	-	971	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	486	0	1	0	multi-exon	FALSE	canonical	3	675	junction_1	0	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7835	False	NA	NA	False	NA	NA	NA	60769612	60755277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_60756175_60769538
tx.1718	chr11	-	3302	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	67	810	67	-810	multi-exon	TRUE	canonical	3	156	junction_2	31	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTCTGCTTTTCTCT	6691	False	NA	NA	False	NA	NA	NA	60804571	60793881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_60796948_60797707_60797827_60804454
tx.1719	chr11	-	1285	2	FSM	ENSMUSG00000042549.11	ENSMUST00000123544.2	1291	2	-4	10	-4	-10	multi-exon	FALSE	canonical	3	28	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGACTTGTATTTATGGG	NA	False	NA	NA	False	NA	NA	NA	60822697	60811752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_60812732_60822391
tx.172	chr1	-	2985	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	154	422	0	-422	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGTCTGCACTTTGC	NA	False	NA	NA	False	NA	NA	NA	58544114	58502351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
tx.1720	chr11	+	2162	12	FSM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	21	15	0	2	multi-exon	FALSE	canonical	3	361	junction_6	27.3405217988137	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822879	60843622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
tx.1721	chr11	+	1770	9	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	11176	15	1329	2	3prime_fragment	FALSE	canonical	3	361	junction_3	27.0138853184802	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	3324	False	NA	NA	False	NA	NA	NA	60834034	60843622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
tx.1722	chr11	+	2177	3	FSM	ENSMUSG00000010142.13	ENSMUST00000137832.8	764	3	23	-1436	-15	-3	multi-exon	FALSE	canonical	1	2	junction_1	4.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACAGTATGCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	61033309	61040195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_61033356_61037666_61037844_61038241
tx.1724	chr11	-	3076	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	16	-1	16	1	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTGTTAATTTTGAC	1349	False	NA	NA	False	NA	NA	NA	61157995	61135677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
tx.1725	chr11	-	2597	7	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	4491	111	-359	-111	3prime_fragment	FALSE	canonical	3	69	junction_1	17.2787602435926	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAATGTTGAACTTGCAC	5824	False	NA	NA	False	NA	NA	NA	61153520	61135789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044
tx.1726	chr11	-	1966	12	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5533	4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	5.65393156562408	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTGAGAATATTTGG	NA	False	NA	NA	False	NA	NA	NA	61227877	61192452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61203684_61204469_61204584_61216622_61216721_61219353_61219452_61227640
tx.1727	chr11	-	2974	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	40	5	10	-5	multi-exon	FALSE	canonical	3	175	junction_5	27.9861076647365	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	61385082	61379642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
tx.1728	chr11	+	783	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	31	3	-28	-3	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTGGGGCCTTCATTTC	NA	False	NA	NA	False	NA	NA	NA	61396000	61403754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
tx.1729	chr11	-	4200	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	7	0	7	0	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	61470504	61408074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
tx.173	chr1	-	2878	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-13	-422	combination_of_known_splicesites	FALSE	canonical	3	18	junction_12	134.155096227277	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGTCTGCACTTTGC	NA	False	NA	NA	False	NA	NA	NA	58544097	58502351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
tx.1730	chr11	-	1479	9	ISM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	6602	0	6552	0	3prime_fragment	FALSE	canonical	3	149	junction_8	29.4976164291286	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	6844	False	NA	NA	False	NA	NA	NA	61646286	61620479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235
tx.1731	chr11	-	1828	12	FSM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	9	0	9	0	multi-exon	FALSE	canonical	3	105	junction_11	44.7137821487915	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	251	False	NA	NA	False	NA	NA	NA	61652879	61620479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652779
tx.1732	chr11	-	1747	11	FSM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	20	4	-6	0	multi-exon	FALSE	canonical	3	49	junction_10	57.9565354382058	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	236	False	NA	NA	False	NA	NA	NA	61652894	61620479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652779
tx.1733	chr11	-	3476	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	33	365	7	0	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	61821045	61762497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
tx.1734	chr11	+	1870	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	-22	-3	-22	3	multi-exon	FALSE	canonical	3	17	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTGGCTTCTTGCACTT	8701	False	NA	NA	False	NA	NA	NA	62139787	62157282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_62140263_62155887
tx.1735	chr11	-	751	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	-19	0	-19	0	multi-exon	TRUE	canonical	3	218	junction_4	57.8986182909402	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	NA	False	NA	NA	NA	62172220	62158049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
tx.1736	chr11	-	626	3	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	132	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	NA	False	NA	NA	NA	62172220	62158049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_62158433_62159529_62159635_62172082
tx.1737	chr11	+	1318	2	ISM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	31620	-4	4060	4	3prime_fragment	FALSE	canonical	3	196	junction_1	0	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGGATTCTAATAATC	NA	False	NA	NA	False	NA	NA	NA	62203927	62206076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_62204005_62204835
tx.1738	chr11	+	1678	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	-17	513	-17	-513	multi-exon	TRUE	canonical	3	156	junction_1	58.9736287580211	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	NA	False	NA	NA	NA	62349268	62404730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
tx.1739	chr11	+	1254	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53083	-513	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	112	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	NA	False	NA	NA	NA	62402516	62404730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_62402636_62402963_62403098_62403729
tx.174	chr1	-	1027	5	ISM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	148	34155	-6	3420	5prime_fragment	FALSE	canonical	3	463	junction_4	49.266494699745	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTAGTC	NA	False	NA	NA	False	NA	NA	NA	58544120	58536084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
tx.1740	chr11	+	1518	2	ISM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	53295	513	53147	-513	3prime_fragment	FALSE	canonical	3	316	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	NA	False	NA	NA	NA	62402580	62404730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_62403098_62403729
tx.1741	chr11	-	790	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	244	-2	-14	2	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATGACATATTTCTTT	8615	False	NA	NA	False	NA	NA	NA	62429843	62415769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
tx.1742	chr11	+	1166	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	333	0	-172	0	multi-exon	FALSE	canonical	3	35417	junction_1	0	6905	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	62442329	62444039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_62442422_62442965
tx.1743	chr11	+	2702	15	ISM	ENSMUSG00000018507.17	ENSMUST00000018651.14	2909	16	1368	212	-219	4	3prime_fragment	FALSE	canonical	1	1	junction_1	4.86553896169326	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTCTTCTAGAAGTATT	8109	False	NA	NA	False	NA	NA	NA	62466731	62491129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_62466952_62469128_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
tx.1744	chr11	+	464	5	FSM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	0	-2	0	2	multi-exon	FALSE	canonical	3	3662	junction_1	404.852056311932	3435	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	NA	NA	NA	62493702	62495635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495480
tx.1745	chr11	-	1710	4	FSM	ENSMUSG00000046417.15	ENSMUST00000143262.2	567	4	0	-1143	0	0	multi-exon	FALSE	canonical	2	4	junction_3	67.1532244613433	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGACTGTGCTTTATTAG	5944	False	NA	NA	False	NA	NA	NA	62538875	62495709	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538770
tx.1746	chr11	+	1811	2	FSM	ENSMUSG00000048497.12	ENSMUST00000062860.5	343	2	27	-1495	27	0	multi-exon	FALSE	canonical	3	15	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	62539516	62557180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_62539643_62555495
tx.1747	chr11	+	1342	3	NNC	ENSMUSG00000048497.12	novel	589	2	NA	NA	30	2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	1.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTCTGTGTCTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	62539519	62557182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_62539683_62555495_62556062_62556569
tx.1748	chr11	+	1728	2	FSM	ENSMUSG00000048497.12	ENSMUST00000155759.3	589	2	-19	-1120	-1	2	multi-exon	FALSE	canonical	3	16	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTCTGTGTCTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	62539641	62557182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_62539683_62555495
tx.1749	chr11	-	2797	4	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.3130005674953	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCAGGTTTTTAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	62680239	62669212	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_62671726_62678784_62678871_62679755_62679916_62680201
tx.175	chr1	+	522	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	215	26	215	-26	multi-exon	FALSE	canonical	3	979	junction_1	90.5	933	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATTAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	58625757	58635097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_58625830_58630248_58630409_58634807
tx.1750	chr11	-	1793	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	42	1216	1	2	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTGTGTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	62680246	62670428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
tx.1751	chr11	-	1678	5	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	17.8535710713571	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGGTGTGTCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	62680248	62670430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755_62679916_62680201
tx.1752	chr11	+	2284	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	0	1622	0	-143	multi-exon	TRUE	canonical	3	37	junction_4	2.33238075793812	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCGTTTGGAGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	62711056	62732140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
tx.1753	chr11	+	1750	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	35	-1	0	1	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	441	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGTGTGGTCCCATTT	9276	False	NA	NA	False	NA	NA	NA	62770315	62786012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
tx.1754	chr11	-	1680	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-4	1239	-2	-1239	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	191	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTCTCCTGGAA	5003	False	NA	NA	False	NA	NA	NA	63970296	63854691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
tx.1755	chr11	+	2918	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	-29	-5	7	5	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTGGGGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	64869870	64892431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
tx.1756	chr11	+	2742	25	FSM	ENSMUSG00000020549.15	ENSMUST00000071891.12	2771	25	30	-1	-3	1	multi-exon	FALSE	canonical	3	56	junction_24	61.5767221304718	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACAACAGTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	64869893	64892896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820_64892040_64892657
tx.1757	chr11	-	1923	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	-15	1787	-15	303	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTGTTCTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	65679138	65580855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
tx.1758	chr11	+	2244	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	27	-1	27	0	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTGTAGCTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	65698027	65720065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
tx.1759	chr11	-	437	2	Antisense	novelGene_ENSMUSG00000048070.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAAGAGAAACTTAG	NA	False	NA	NA	False	NA	NA	NA	66804942	66789167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_-_66789509_66804846
tx.176	chr1	+	2320	12	FSM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	47	593	47	0	multi-exon	FALSE	canonical	3	56	junction_7	10.2964328252857	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTTTTATATATTTTG	NA	False	NA	NA	False	NA	NA	NA	59012727	59034281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
tx.1760	chr11	+	1598	6	FSM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	5	-6	5	6	multi-exon	FALSE	canonical	3	15	junction_4	4.45421149026402	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGGGAGAATTACTAG	3923	False	NA	NA	False	NA	NA	NA	66915984	66926144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934
tx.1761	chr11	-	1315	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	-39	7	-15	-7	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	127	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAAGTATTCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	66943435	66928873	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
tx.1762	chr11	+	1770	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	-18	660	-18	-419	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTTTGCTTCTGTGAA	NA	False	NA	NA	False	NA	NA	NA	66943477	66955738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
tx.1763	chr11	+	1040	8	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	37568	-88	-114	4	3prime_fragment	FALSE	canonical	3	79	junction_5	8.27092275778864	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTCTGCTGTGTTTGTT	66	False	NA	NA	False	NA	NA	NA	67255496	67262416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
tx.1764	chr11	+	847	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	279	3268	3	110	multi-exon	FALSE	canonical	3	260	junction_1	20.1626043021455	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTACCTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	67857297	68094706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
tx.1765	chr11	+	1501	3	FSM	ENSMUSG00000020903.14	ENSMUST00000108675.2	1497	3	-1	-3	-1	3	multi-exon	FALSE	canonical	3	260	junction_1	29.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGGGCCTTCTTTCAA	NA	False	NA	NA	False	NA	NA	NA	67857304	67865420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_67857344_67860597_67860698_67864058
tx.1766	chr11	-	2373	9	FSM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	9	0	9	0	multi-exon	FALSE	canonical	3	185	junction_5	15.9530561335438	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGAGATTGCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	68743952	68712259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
tx.1767	chr11	+	531	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	-4	-1	-4	1	multi-exon	FALSE	canonical	3	13360	junction_1	1585.12172683642	10374	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTTGTGTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	68792404	68795361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
tx.1768	chr11	+	903	3	Antisense	novelGene_ENSMUSG00000052921.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTAGCTGCATCC	NA	False	NA	NA	False	NA	NA	NA	68847579	68853318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_+_68847865_68848219_68848631_68853111
tx.1769	chr11	+	1821	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	7	0	7	0	multi-exon	FALSE	canonical	3	33	junction_2	4.96865172858795	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTGTCTTATGTTTA	5565	False	NA	NA	False	NA	NA	NA	68858963	68863342	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
tx.177	chr1	-	2130	13	FSM	ENSMUSG00000072295.8	ENSMUST00000097080.4	2131	13	2	-1	2	1	multi-exon	FALSE	canonical	1	1	junction_7	3.19722101554181	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACATAGCACATATGTT	NA	False	NA	NA	False	NA	NA	NA	59134057	59089663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_59090445_59091654_59091693_59097814_59097879_59099730_59099837_59101554_59101690_59105308_59105389_59106935_59107005_59107841_59107887_59108875_59109002_59114155_59114302_59115829_59115882_59117041_59117129_59133656
tx.1770	chr11	-	826	5	FSM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	482	junction_2	47.2989164780759	971	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7230	False	NA	NA	False	NA	NA	NA	68864675	68863309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266_68864384_68864467
tx.1771	chr11	+	3977	23	FSM	ENSMUSG00000020898.19	ENSMUST00000021278.14	4164	23	184	3	-2	0	multi-exon	FALSE	canonical	3	209	junction_14	54.4241833704208	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5270	False	NA	NA	False	NA	NA	NA	68906920	68927296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
tx.1772	chr11	+	3987	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	-9	0	2	0	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5263	False	NA	NA	False	NA	NA	NA	68906913	68927296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
tx.1773	chr11	+	625	3	ISM	ENSMUSG00000020898.19	ENSMUST00000161271.2	516	4	737	-290	737	0	3prime_fragment	FALSE	canonical	3	458	junction_2	2.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	False	NA	NA	False	NA	NA	NA	68926441	68927296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_68926497_68926592_68926720_68926853
tx.1774	chr11	+	1781	9	NNC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	184.266790279746	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	NA	False	NA	NA	NA	68936448	68942490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_68936497_68936694_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
tx.1775	chr11	+	1945	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	5	0	5	0	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	NA	False	NA	NA	NA	68936482	68942490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
tx.1776	chr11	+	777	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	2	0	2	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4649	False	NA	NA	False	NA	NA	NA	68961633	68963856	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
tx.1777	chr11	+	805	5	NNC	ENSMUSG00000020895.15	novel	779	5	NA	NA	14	68	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	158.914088425161	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTGGTTAGGGCTAGA	4668	False	NA	NA	False	NA	NA	NA	68961652	68963924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963325_68963571
tx.1778	chr11	+	2166	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	36	3	4	-3	multi-exon	FALSE	canonical	3	85	junction_4	21.4126131053639	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATGGTGTCCAAAATCT	NA	False	NA	NA	False	NA	NA	NA	68979351	68983207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
tx.1779	chr11	+	2791	4	FSM	ENSMUSG00000020894.17	ENSMUST00000117780.2	1113	4	16	-1694	4	0	multi-exon	FALSE	canonical	3	124	junction_1	8.17856276425687	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	68979351	68983210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801
tx.178	chr1	-	1884	12	NIC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	6	32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	73.6320986419185	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCGCCAGTTATTTTCC	4058	False	NA	NA	False	NA	NA	NA	59159247	59139716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59159110
tx.1780	chr11	+	1710	8	ISM	ENSMUSG00000020892.11	ENSMUST00000021268.9	3019	15	7887	0	-359	0	3prime_fragment	FALSE	canonical	2	6	junction_2	2.49079939630896	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTGTTTTGATGATG	3702	False	NA	NA	False	NA	NA	NA	69024608	69039941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_69024908_69024989_69025194_69025282_69025370_69025831_69026002_69026697_69026820_69033011_69033113_69033672_69033844_69039385
tx.1781	chr11	+	589	4	ISM	ENSMUSG00000032807.6	ENSMUST00000036424.3	2431	15	10418	1	10418	-1	3prime_fragment	FALSE	canonical	3	17	junction_3	8.17856276425687	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGTCTGAGAACGTGGG	NA	False	NA	NA	False	NA	NA	NA	69058232	69060617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_69058304_69059603_69059705_69060043_69060215_69060371
tx.1782	chr11	+	762	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	239	junction_1	97.8682149627753	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	69214794	69216619	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
tx.1783	chr11	+	747	4	FSM	ENSMUSG00000049299.15	ENSMUST00000102601.10	759	4	12	0	0	0	multi-exon	FALSE	canonical	3	452	junction_2	10.7082522694727	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	69214900	69216619	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216264
tx.1784	chr11	+	1769	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	312	0	2	0	multi-exon	FALSE	canonical	3	42	junction_1	0	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGACTGTTATTG	NA	False	NA	NA	False	NA	NA	NA	69231598	69233467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69231885_69231984
tx.1785	chr11	-	3577	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-142	-2682	-142	995	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAGTGGGTCTGATGTG	NA	False	NA	NA	False	NA	NA	NA	69286301	69281755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
tx.1786	chr11	+	550	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	118	3	-49	-3	multi-exon	FALSE	canonical	3	948	junction_1	166	374	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTGTGTCTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	69286590	69287503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69286799_69287002_69287187_69287345
tx.1787	chr11	+	391	2	FSM	ENSMUSG00000059278.10	ENSMUST00000124932.2	404	2	10	3	10	-3	multi-exon	FALSE	canonical	3	1280	junction_1	0	174	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTGTGTCTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	69286953	69287503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69287187_69287345
tx.1788	chr11	-	875	2	FSM	ENSMUSG00000045377.6	ENSMUST00000050140.6	1582	2	-7	714	-7	-714	multi-exon	FALSE	canonical	3	22	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTCTGTGAATACAGGG	NA	False	NA	NA	False	NA	NA	NA	69289067	69288058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69288708_69288841
tx.1789	chr11	-	707	4	ISM	ENSMUSG00000041346.12	ENSMUST00000155894.2	985	7	1073	-2	1073	2	3prime_fragment	FALSE	canonical	3	164	junction_3	10.2740233382816	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCATTGTGTCTGTTCGG	NA	False	NA	NA	False	NA	NA	NA	69453675	69452581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474
tx.179	chr1	-	1844	12	NIC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	-3	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	73.814711069325	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGGTTTTTCCTTTTTA	4031	False	NA	NA	False	NA	NA	NA	59159274	59139738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59159155
tx.1790	chr11	-	1836	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	55	0	55	0	multi-exon	FALSE	canonical	3	103	junction_6	29.7960143162773	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	69470095	69452584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
tx.1791	chr11	+	1730	11	FSM	ENSMUSG00000059552.14	ENSMUST00000005371.12	1772	11	42	0	-1	0	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	667	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	69471226	69482699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
tx.1792	chr11	-	2984	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	-134	-8	-21	8	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGCTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	69496789	69490553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
tx.1793	chr11	+	941	6	FSM	ENSMUSG00000069835.11	ENSMUST00000108656.9	968	6	28	-1	0	1	multi-exon	FALSE	canonical	2	7	junction_2	1.72046505340853	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCAGCCATTTTGAAGC	NA	False	NA	NA	False	NA	NA	NA	69512877	69514697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69513159_69513318_69513371_69513532_69513617_69513685_69513788_69513937_69513979_69514316
tx.1794	chr11	+	943	4	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	556.054154037376	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	NA	False	NA	NA	NA	69523787	69544123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_69523877_69542837_69542900_69543035_69543134_69543429
tx.1795	chr11	+	1429	6	ISM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	17941	0	-198	0	3prime_fragment	FALSE	canonical	3	1063	junction_4	117.696219140633	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	NA	False	NA	NA	NA	69541756	69544123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
tx.1796	chr11	+	1451	5	ISM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	18085	0	-54	0	3prime_fragment	FALSE	canonical	3	1063	junction_3	111.850346445597	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	NA	False	NA	NA	NA	69541900	69544123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
tx.1797	chr11	+	1171	2	FSM	ENSMUSG00000041287.6	ENSMUST00000047373.6	861	2	-310	0	-310	0	multi-exon	FALSE	canonical	3	116	junction_1	0	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCCCATTTGTAT	NA	False	NA	NA	False	NA	NA	NA	69545829	69547553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69546726_69547278
tx.1798	chr11	-	1264	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	52	5	-3	-5	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	486	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6813	False	NA	NA	False	NA	NA	NA	69553416	69547527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
tx.1799	chr11	-	1204	6	FSM	ENSMUSG00000018761.15	ENSMUST00000125389.2	646	6	-98	-460	26	-5	multi-exon	FALSE	canonical	3	53	junction_3	239.282761602252	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6787	False	NA	NA	False	NA	NA	NA	69553442	69547527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69549391_69549525_69549636_69549703_69553294
tx.18	chr1	-	1711	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	-895	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	75	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	NA	False	NA	NA	NA	10014343	10012247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_10012381_10012547_10012617_10012834
tx.180	chr1	-	1805	12	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	20	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	59.5276170368229	55	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGAAGGTTTTTCCTT	4360	False	NA	NA	False	NA	NA	NA	59158945	59139742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
tx.1800	chr11	-	1329	7	FSM	ENSMUSG00000018761.15	ENSMUST00000148242.8	971	7	-33	-325	22	-5	multi-exon	FALSE	canonical	3	35	junction_4	228.446018423026	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6783	False	NA	NA	False	NA	NA	NA	69553446	69547527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548883_69549391_69549525_69549636_69549703_69553294
tx.1801	chr11	-	1283	6	FSM	ENSMUSG00000018774.14	ENSMUST00000018918.12	1230	6	-53	0	-53	0	multi-exon	FALSE	canonical	3	102	junction_5	17.4653943556966	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCTTTCCTCATTAA	3197	False	NA	NA	False	NA	NA	NA	69557032	69555038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845
tx.1802	chr11	-	1773	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	0	1	0	0	multi-exon	TRUE	canonical	3	9657	junction_10	1402.57834362292	5458	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	69563143	69557762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
tx.1803	chr11	-	2385	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-72	0	-72	0	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8458	False	NA	NA	False	NA	NA	NA	69572744	69563940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
tx.1804	chr11	-	814	2	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	10802	4	8679	-4	3prime_fragment	FALSE	canonical	3	28	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTTTTGTCTATTT	9584	False	NA	NA	False	NA	NA	NA	69675967	69674865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_69675588_69675875
tx.1805	chr11	+	471	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	21	0	-10	0	multi-exon	FALSE	canonical	3	1210	junction_1	145.470119115767	609	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	NA	NA	NA	69729370	69730444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
tx.1806	chr11	+	1766	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	0	1019	0	3	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAAGCCGGATGTGAT	NA	False	NA	NA	False	NA	NA	NA	69737442	69741865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
tx.1807	chr11	+	1955	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	-35	7	24	0	multi-exon	FALSE	canonical	3	67	junction_4	3.33749739908346	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAGAAGCCGGATGT	NA	False	NA	NA	False	NA	NA	NA	69737466	69741862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
tx.1808	chr11	-	1985	7	ISM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	3247	-1	119	1	3prime_fragment	FALSE	canonical	3	13	junction_4	5.84997625826141	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACACAGCCTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	69746309	69741829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783
tx.1809	chr11	-	2679	14	FSM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	-44	143	-44	71	multi-exon	FALSE	canonical	3	9	junction_11	5.7316726185222	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTTTTCCTTTAATCC	9036	False	NA	NA	False	NA	NA	NA	69749600	69741973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
tx.181	chr1	-	1783	11	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_10	51.7934358775318	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATTAACTGAAGGTTTT	4345	False	NA	NA	False	NA	NA	NA	59158960	59139747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59158861
tx.1810	chr11	-	2495	22	FSM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	-12	-1	-12	1	multi-exon	TRUE	canonical	3	20	junction_20	9.40183800238705	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTAGTTCATTTAC	9561	False	NA	NA	False	NA	NA	NA	69786377	69772391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
tx.1811	chr11	+	1180	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	-20	-1	-20	0	multi-exon	FALSE	canonical	3	122	junction_1	67.5763272159711	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4071	False	NA	NA	False	NA	NA	NA	69804855	69807417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
tx.1812	chr11	+	1382	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	-162	0	-20	0	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4071	False	NA	NA	False	NA	NA	NA	69804855	69807417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
tx.1813	chr11	-	1331	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	12	0	12	0	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	8207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	9953	False	NA	NA	False	NA	NA	NA	69812200	69807545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
tx.1814	chr11	-	2568	11	FSM	ENSMUSG00000018566.15	ENSMUST00000018710.13	2524	11	-39	-5	0	1	multi-exon	FALSE	canonical	3	12	junction_2	3.57910603363466	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTGTGCTGGAGGAAC	NA	False	NA	NA	False	NA	NA	NA	69839014	69833363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69834399_69834884_69835089_69835612_69835715_69835827_69835933_69836094_69836283_69836388_69836552_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
tx.1815	chr11	-	1768	10	FSM	ENSMUSG00000018566.15	ENSMUST00000141837.9	1776	10	3	5	3	-5	multi-exon	FALSE	canonical	3	12	junction_1	3.19722101554181	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTATTAATGCTATAAG	NA	False	NA	NA	False	NA	NA	NA	69838987	69834622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69835089_69835612_69835715_69835827_69835933_69836094_69836283_69836388_69836552_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
tx.1816	chr11	+	908	5	NIC	ENSMUSG00000018569.13	novel	1335	4	NA	NA	-94	0	combination_of_known_junctions	TRUE	canonical	1	6	junction_1	48.7493589701444	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTTCCAGGCCGCT	8649	False	NA	NA	False	NA	NA	NA	69856127	69858708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_69856193_69856710_69856976_69857768_69857934_69858045_69858131_69858380
tx.1817	chr11	+	1295	4	FSM	ENSMUSG00000018569.13	ENSMUST00000018713.13	1335	4	40	0	40	0	multi-exon	FALSE	canonical	3	113	junction_1	5.71547606649408	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTCCAGGCCGCTTTT	8783	False	NA	NA	False	NA	NA	NA	69856261	69858711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69856976_69857768_69857934_69858045_69858131_69858380
tx.1818	chr11	-	1132	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	966	0	-14	0	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	433	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9866	False	NA	NA	False	NA	NA	NA	69871112	69859049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
tx.1819	chr11	+	891	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	457	3	-39	-3	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	781	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGCCCTGTGTCATTC	5185	False	NA	NA	False	NA	NA	NA	69882425	69885774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
tx.182	chr1	-	1181	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	31	3	-11	-3	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	1675	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAAGCTCCTTTTATT	620	False	NA	NA	False	NA	NA	NA	59709962	59678595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
tx.1820	chr11	+	1990	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	16	0	16	0	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2333	False	NA	NA	False	NA	NA	NA	69886618	69890835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
tx.1821	chr11	+	1755	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-49	0	-49	0	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2367	False	NA	NA	False	NA	NA	NA	69886652	69890835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
tx.1822	chr11	+	2944	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	27	-3	5	3	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7162	False	NA	NA	False	NA	NA	NA	69891447	69900940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
tx.1823	chr11	+	1828	8	ISM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	5781	0	-604	0	3prime_fragment	FALSE	canonical	3	521	junction_4	27.6685926712611	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	2170	False	NA	NA	False	NA	NA	NA	69897201	69900937	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
tx.1824	chr11	-	2178	20	FSM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	-15	5	-12	1	multi-exon	FALSE	canonical	3	125	junction_10	16.9960073525513	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGCCGTGAATGTCAC	NA	False	NA	NA	False	NA	NA	NA	69906249	69901013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
tx.1825	chr11	+	1022	5	FSM	ENSMUSG00000040963.16	ENSMUST00000179757.2	672	5	-19	-331	-19	0	multi-exon	FALSE	canonical	3	41	junction_2	4.49305018890286	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTAGCCTGGTTGTTT	6971	False	NA	NA	False	NA	NA	NA	69988498	69997013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_69988718_69988878_69988966_69989053_69989200_69996201_69996309_69996550
tx.1826	chr11	+	1076	4	ISM	ENSMUSG00000040950.14	ENSMUST00000041550.12	1586	10	5822	0	1978	0	3prime_fragment	FALSE	canonical	1	2	junction_3	0.942809041582063	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTAGCTCCATTTCT	142	False	NA	NA	False	NA	NA	NA	70026976	70028376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_70027164_70027266_70027419_70027495_70027603_70027746
tx.1827	chr11	+	400	2	FSM	ENSMUSG00000040938.17	ENSMUST00000149880.2	558	2	158	0	158	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTTGAGAGTTCCATTA	NA	False	NA	NA	False	NA	NA	NA	70105801	70107239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70105925_70106962
tx.1828	chr11	-	604	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	7	0	7	0	multi-exon	FALSE	canonical	3	718	junction_2	4	523	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTGTCTGTGCTTTCA	NA	False	NA	NA	False	NA	NA	NA	70130661	70128949	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70129297_70129763_70129841_70130481
tx.1829	chr11	-	731	2	ISM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	15678	-2	15678	2	3prime_fragment	FALSE	canonical	3	725	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCTGCTTTGGCTCT	NA	False	NA	-26	True	NA	NA	NA	70285176	70283706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_70283849_70284587
tx.183	chr1	+	2008	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-35	7534	3	0	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	486	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	59724132	59750669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
tx.1830	chr11	-	3445	17	FSM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	-8	-2	-5	2	multi-exon	FALSE	canonical	3	551	junction_9	48.6591701917532	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCTGCTTTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	70300862	70283706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
tx.1831	chr11	+	1774	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	4	-1	4	1	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	70323466	70331501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
tx.1832	chr11	+	1739	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-10	119	-2	1	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	70323468	70331501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
tx.1833	chr11	+	911	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	-4	-5	-4	5	multi-exon	FALSE	canonical	3	117	junction_2	11	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTCTCTCGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	70342740	70344558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70342890_70343033_70343165_70343927
tx.1834	chr11	-	1477	5	FSM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	16	1206	16	1	multi-exon	FALSE	canonical	2	5	junction_4	7.17635004720366	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCCCCCATTGACATT	7616	False	NA	NA	False	NA	NA	NA	70350794	70346014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70346271_70346480_70346889_70349570_70349654_70349854_70349994_70350203
tx.1835	chr11	+	818	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-16	-4	3	4	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	4340	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTGTGTGAAGGTTCT	NA	False	NA	NA	False	NA	NA	NA	70416195	70418479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
tx.1836	chr11	-	1637	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	74	0	-6	0	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	749	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	False	NA	NA	False	NA	NA	NA	70537810	70535021	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
tx.1837	chr11	+	1837	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	-4	0	-4	0	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9186	False	NA	NA	False	NA	NA	NA	70538108	70542247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
tx.1838	chr11	-	856	3	FSM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	9	-4	9	4	multi-exon	FALSE	canonical	3	9692	junction_2	172	1924	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTGGTTTGCACT	NA	False	NA	NA	False	NA	NA	NA	70545461	70542671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70543048_70543612_70543806_70545174
tx.1839	chr11	+	1674	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1418	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	16.078320705043	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	5695	False	NA	NA	False	NA	NA	NA	70546609	70553339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_70546896_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
tx.184	chr1	+	376	2	ISM	ENSMUSG00000026020.10	ENSMUST00000188390.2	585	7	5808	-230	5808	0	3prime_fragment	FALSE	canonical	3	2320	junction_1	0	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	59749675	59750669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_59749812_59750429
tx.1840	chr11	+	1520	12	FSM	ENSMUSG00000060600.16	ENSMUST00000072841.12	1454	12	-66	0	-66	0	multi-exon	FALSE	canonical	2	23	junction_1	14.3486688414174	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	7047	False	NA	NA	False	NA	NA	NA	70547961	70553339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
tx.1841	chr11	-	1020	7	FSM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	122	17	-4	-17	multi-exon	FALSE	canonical	3	730	junction_3	39.5179284207392	640	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGACTTGTACCTGGA	NA	False	NA	NA	False	NA	NA	NA	70560120	70554613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
tx.1842	chr11	+	1843	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	213	5	213	-5	multi-exon	FALSE	canonical	3	29	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATCCTCCTCTGGCCTT	83	False	NA	NA	False	NA	NA	NA	70655247	70663749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70655376_70662034
tx.1843	chr11	-	2437	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	11	5	0	0	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	NA	False	NA	NA	NA	70860788	70833902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
tx.1844	chr11	-	2427	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-13	-25	-5	0	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	NA	False	NA	NA	NA	70860793	70833902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
tx.1845	chr11	+	959	6	FSM	ENSMUSG00000018449.13	ENSMUST00000167509.2	519	6	-325	-115	-31	1	multi-exon	FALSE	canonical	3	23	junction_5	118.829962551538	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	NA	False	NA	NA	NA	70861007	70868628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70868483
tx.1846	chr11	+	831	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	262	7	-5	-7	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAACCTCAACTTTCCT	NA	False	NA	NA	False	NA	NA	NA	70861300	70868652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
tx.1847	chr11	-	463	2	ISM	ENSMUSG00000018446.9	ENSMUST00000155371.2	703	3	380	-2	380	2	3prime_fragment	FALSE	canonical	3	5339	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTTGAGGTTCTTTCG	NA	False	NA	NA	False	NA	NA	NA	70869317	70868671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_70869071_70869253
tx.1848	chr11	-	620	3	FSM	ENSMUSG00000018446.9	ENSMUST00000155371.2	703	3	85	-2	85	2	multi-exon	FALSE	canonical	3	5159	junction_2	90	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTTGAGGTTCTTTCG	NA	False	NA	NA	False	NA	NA	NA	70869612	70868671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70869071_70869253_70869377_70869514
tx.1849	chr11	-	651	4	ISM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	2978	16	-1177	-4	3prime_fragment	FALSE	canonical	3	5159	junction_2	130.589262788162	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAGGAAAGTTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	70870874	70868677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835
tx.185	chr1	-	1639	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	15	8358	15	-1275	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	602	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	60137052	60117301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
tx.1850	chr11	-	898	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	257	20	238	-8	multi-exon	FALSE	canonical	3	4814	junction_4	225.05234946563	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTCCAGGAAAGTTGA	NA	False	NA	NA	False	NA	NA	NA	70873595	70868681	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
tx.1851	chr11	-	2792	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-31	2423	-31	-4	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTTCCAGAGTAAGGTA	NA	False	NA	NA	False	NA	NA	NA	70895294	70877339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
tx.1852	chr11	-	1146	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	37	2483	3	8	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGCTTTCGTGTGATCT	NA	False	NA	NA	False	NA	NA	NA	70910092	70900750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
tx.1853	chr11	+	3013	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	-12	2	-12	-2	multi-exon	FALSE	canonical	3	76	junction_1	24	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTATTATTGCTTA	NA	False	NA	NA	False	NA	NA	NA	70910424	70918195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70911016_70915375_70915538_70915935
tx.1854	chr11	+	2711	4	FSM	ENSMUSG00000040599.14	ENSMUST00000164220.8	1416	4	0	-1295	0	-10	multi-exon	FALSE	canonical	3	11	junction_1	46.3057471835	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGTATTTATGTATT	NA	False	NA	NA	False	NA	NA	NA	70910436	70918187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70910550_70910831_70911016_70915375_70915538_70915935
tx.1855	chr11	+	2528	3	FSM	ENSMUSG00000040599.14	ENSMUST00000133413.8	344	3	-1	-2183	-1	-10	multi-exon	FALSE	canonical	3	36	junction_1	44	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGTATTTATGTATT	NA	False	NA	NA	False	NA	NA	NA	70910435	70918187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_70910550_70915375_70915538_70915935
tx.1856	chr11	+	1503	6	FSM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	10	0	10	0	multi-exon	TRUE	canonical	0	0	junction_3	92.1316449435263	210	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	NA	False	NA	NA	NA	71933290	71938196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937512
tx.1857	chr11	+	749	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	7	225	7	-225	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	1196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTTTTAACACGTGG	NA	False	NA	NA	False	NA	NA	NA	72098379	72100616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
tx.1858	chr11	-	629	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	535	-3	-4	3	multi-exon	FALSE	canonical	3	203	junction_2	14.0079342596338	188	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGCTCCACTTTGATTT	NA	False	NA	NA	False	NA	NA	NA	72105883	72102546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
tx.1859	chr11	-	1475	2	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACCCGTGTTGCTATTCT	NA	False	NA	NA	False	NA	NA	NA	72123012	72115358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_72116591_72122769
tx.186	chr1	-	1506	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	1275	-29	-1275	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	60137334	60117301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
tx.1860	chr11	-	991	6	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4500	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.6320270880016	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGCACAGAGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	72247622	72235547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72247574
tx.1861	chr11	+	4142	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	0	216	0	-216	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGCCAATCTCTGACTCA	NA	False	NA	NA	False	NA	NA	NA	72332180	72342378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
tx.1862	chr11	+	2398	14	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	4803	213	-2059	-213	3prime_fragment	FALSE	canonical	3	2385	junction_2	207.049403817789	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAATCTCTGACTCAACC	NA	False	NA	NA	False	NA	NA	NA	72336983	72342381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
tx.1863	chr11	+	1909	10	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	6423	218	-439	-218	3prime_fragment	FALSE	canonical	3	2480	junction_2	161.835612372861	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	-2	True	NA	NA	NA	72338603	72342376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
tx.1864	chr11	+	1807	9	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	6600	216	-262	-216	3prime_fragment	FALSE	canonical	3	2480	junction_1	171.638382580937	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGCCAATCTCTGACTCA	NA	False	NA	NA	False	NA	NA	NA	72338780	72342378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
tx.1865	chr11	+	1961	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-15	1869	-15	-1869	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	209	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAAGTTGTTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	72498093	72575438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
tx.1866	chr11	+	3599	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	541	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	315.78689016487	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTATTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	72498685	72577307	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_72498823_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
tx.1867	chr11	+	2690	18	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	4	-4881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.9037688033521	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTTATAGTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	72580835	72646835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640947_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515
tx.1868	chr11	+	2919	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	87	9100	0	-9100	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTGTCTCTGACTTA	NA	False	NA	NA	False	NA	NA	NA	72938695	72971043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
tx.1869	chr11	+	1734	4	ISM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	25442	9256	25352	-9256	3prime_fragment	FALSE	canonical	3	251	junction_1	20.0720922897661	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAGTGTCATTATTTT	2846	False	NA	NA	False	NA	NA	NA	72964050	72970887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_72964347_72966440_72966596_72968680_72968843_72969766
tx.187	chr1	+	465	2	ISM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	-16	156504	-16	-4074	5prime_fragment	FALSE	canonical	3	24	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATTGTGTAGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	60219741	60220983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_60219845_60220621
tx.1870	chr11	+	742	4	NIC	ENSMUSG00000005947.12	novel	3845	31	NA	NA	47788	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	12.9614813968157	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTATGTTGTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	73029196	73038270	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_73029338_73031492_73031589_73036366_73036478_73037876
tx.1871	chr11	+	811	5	ISM	ENSMUSG00000005947.12	ENSMUST00000006101.4	3845	31	47817	0	47817	0	3prime_fragment	FALSE	canonical	3	28	junction_3	3.24037034920393	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGTTGTTTGAGACA	NA	False	NA	NA	False	NA	NA	NA	73029225	73038272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_73029338_73029592_73029689_73031492_73031589_73036366_73036478_73037876
tx.1872	chr11	+	1456	5	ISM	ENSMUSG00000005950.15	ENSMUST00000006104.10	2395	13	7332	2	7168	-2	3prime_fragment	FALSE	canonical	2	6	junction_4	2.9474565306379	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCTGACCTGTGCCC	NA	False	NA	NA	False	NA	NA	NA	73058578	73063509	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062590
tx.1873	chr11	-	1320	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	10	2	10	-2	multi-exon	FALSE	canonical	3	946	junction_1	0	584	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTGCGCATGGAATT	NA	False	NA	NA	False	NA	NA	NA	73067853	73066346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_73067578_73067764
tx.1874	chr11	+	1291	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	127	105	-41	0	multi-exon	FALSE	canonical	3	98	junction_1	3.09120616516523	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGTTTCTGTTAGATG	4335	False	NA	NA	False	NA	NA	NA	73068035	73072873	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
tx.1875	chr11	-	2567	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	3	0	3	0	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGGAACGTTTACTAGA	4468	False	NA	NA	False	NA	NA	NA	73089865	73074421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
tx.1876	chr11	-	1686	7	NIC	ENSMUSG00000020774.10	novel	1530	6	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	6.39444203108363	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGATGACTGTGATATCT	NA	False	NA	NA	False	NA	NA	NA	73215460	73195814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73213904_73214058_73215080
tx.1877	chr11	-	567	4	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	40278	3607	39591	-3607	3prime_fragment	FALSE	canonical	3	950	junction_3	68.644009206922	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGATGTAGATTGAACT	NA	False	NA	NA	False	NA	NA	NA	74574406	74568382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284
tx.1878	chr11	-	1892	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	303	3608	-32	-3607	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	396	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGATGTAGATTGAACT	NA	False	NA	NA	False	NA	NA	NA	74615193	74568382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
tx.1879	chr11	+	2714	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	9	704	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	139.204202522769	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGCATTGTTTTGTAAC	8503	False	NA	NA	False	NA	NA	NA	74661664	74709424	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
tx.188	chr1	+	2232	13	FSM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	-9	0	-9	0	multi-exon	FALSE	canonical	3	86	junction_1	9.38083151964686	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	60382472	60427219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
tx.1880	chr11	+	2737	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	13	9834	13	797	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8507	False	NA	NA	False	NA	NA	NA	74661668	74709517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
tx.1881	chr11	+	2589	9	NIC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	20	797	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	131.28880378768	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8514	False	NA	NA	False	NA	NA	NA	74661675	74709517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
tx.1882	chr11	+	1596	2	ISM	ENSMUSG00000010554.15	ENSMUST00000134571.2	656	3	8452	-1180	8452	797	3prime_fragment	FALSE	canonical	3	390	junction_1	0	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	NA	False	NA	NA	False	NA	NA	NA	74707806	74709517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_74707870_74707984
tx.1883	chr11	+	3377	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	10	2	10	-2	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	NA	False	NA	NA	NA	74788913	74800166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
tx.1884	chr11	+	2107	9	ISM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	4029	2	394	-2	3prime_fragment	FALSE	canonical	3	655	junction_2	84.3184996012144	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	NA	False	NA	NA	NA	74792932	74800166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
tx.1885	chr11	+	2048	8	ISM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	5741	2	-151	-2	3prime_fragment	FALSE	canonical	3	655	junction_1	87.4470101938124	326	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	NA	False	NA	NA	NA	74794644	74800166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
tx.1886	chr11	+	1694	6	ISM	ENSMUSG00000038335.14	ENSMUST00000153316.8	708	7	1232	-1026	-9	-2	3prime_fragment	FALSE	canonical	3	671	junction_1	81.7449692641694	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	NA	False	NA	NA	NA	74796027	74800166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
tx.1887	chr11	-	1541	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	271	1371	-2	-1351	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCCACAGTCTCCGATA	NA	False	NA	NA	False	NA	NA	NA	74816503	74798995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
tx.1888	chr11	+	744	2	ISM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	-12	234905	-12	-62663	5prime_fragment	FALSE	canonical	3	122	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGGAAAAAAGATTGA	NA	False	NA	NA	False	NA	NA	NA	74816636	74820369	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_74816830_74819818
tx.1889	chr11	-	874	2	FSM	ENSMUSG00000038268.5	ENSMUST00000123489.2	745	2	-24	-105	24	105	multi-exon	FALSE	canonical	3	10	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTGCTGCCCC	1661	False	NA	NA	False	NA	NA	NA	75069637	75068521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_75069214_75069455
tx.189	chr1	+	1824	10	ISM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	11238	0	11238	0	3prime_fragment	FALSE	canonical	3	93	junction_1	8.62525719781127	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	60393719	60427219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
tx.1890	chr11	-	898	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	18	1754	18	105	multi-exon	FALSE	canonical	3	105	junction_1	0	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTGCTGCCCC	1655	False	NA	NA	False	NA	NA	NA	75069643	75068521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_75069214_75069437
tx.1891	chr11	-	2046	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	40	53	40	0	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTGCTGCCCC	NA	False	NA	NA	False	NA	NA	NA	75081305	75068521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
tx.1892	chr11	-	2884	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	11	2182	-3	2	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTGACTGTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	75239139	75191173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
tx.1893	chr11	-	759	4	ISM	ENSMUSG00000000751.14	ENSMUST00000154894.2	716	7	-15	23815	0	2123	5prime_fragment	FALSE	canonical	3	1885	junction_3	45.784519460427	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	75239136	75230680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_75231225_75231853_75231933_75232969_75233021_75239051
tx.1894	chr11	-	1443	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	129	260	14	35	multi-exon	TRUE	canonical	3	25	junction_1	3.91751691451488	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTTCTTCCTTCTCC	5507	False	NA	NA	False	NA	NA	NA	75313398	75300854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
tx.1895	chr11	+	1634	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	134	-16	29	16	multi-exon	FALSE	canonical	3	9	junction_2	6.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTATGAGTGTTTTGC	3972	False	NA	NA	False	NA	NA	NA	75352498	75357518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_75352582_75354518_75354684_75356132
tx.1896	chr11	+	1900	4	ISM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	-15	8	-15	-8	intron_retention	FALSE	canonical	3	27	junction_1	3.09120616516523	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCAGTCTCTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	75358889	75361717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297
tx.1897	chr11	+	1503	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	111	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGCATCTCTGGTTAA	NA	False	NA	NA	False	NA	NA	NA	75479095	75517553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
tx.1898	chr11	+	1390	9	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	10020	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	223.14649756382	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGCATCTCTGGTTAA	1863	False	NA	NA	False	NA	NA	NA	75489004	75517553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
tx.1899	chr11	-	363	2	Genic_Genomic	ENSMUSG00000081485.6	novel	192	1	NA	NA	-94	130	multi-exon	FALSE	canonical	2	8	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTTACTAATGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	75490874	75490458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr11_-_75490563_75490615
tx.19	chr1	-	409	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	64	0	0	multi-exon	FALSE	canonical	3	370	junction_3	129.892263049036	524	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	NA	False	NA	NA	NA	10014343	10012247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
tx.190	chr1	+	1230	5	ISM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	32824	0	32824	0	3prime_fragment	FALSE	canonical	3	93	junction_2	7.22409163839994	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	5518	False	NA	NA	False	NA	NA	NA	60415305	60427219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
tx.1900	chr11	+	1237	8	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	15233	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	231.157160073101	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGCATCTCTGGTTAA	3753	False	NA	NA	False	NA	NA	NA	75494217	75517553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
tx.1901	chr11	+	722	3	ISM	ENSMUSG00000017781.18	ENSMUST00000179445.8	1665	12	32213	3	-339	-3	3prime_fragment	FALSE	canonical	3	631	junction_2	40.5	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGCATCTCTGGTTAA	1040	False	NA	NA	False	NA	NA	NA	75511157	75517553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_75511203_75516290_75516357_75516942
tx.1902	chr11	-	698	4	Antisense	novelGene_ENSMUSG00000017781.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_3	6.79869268479038	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATAATCTATCTCAGG	NA	False	NA	NA	False	NA	NA	NA	75521615	75516129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_-_75516409_75518486_75518577_75519066_75519211_75521430
tx.1903	chr11	+	1809	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	1	869	1	138	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCATGCCATTTCTTTT	5440	False	NA	NA	False	NA	NA	NA	75521814	75538828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
tx.1904	chr11	+	1493	3	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	16091	-2	1688	0	3prime_fragment	FALSE	canonical	3	324	junction_2	21	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	75562789	75564736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_75562882_75562977_75563078_75563435
tx.1905	chr11	+	3000	2	ISM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	13202	-28	12919	28	3prime_fragment	FALSE	canonical	3	225	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAATCTTGAAATATT	6154	False	NA	NA	False	NA	NA	NA	75583286	75596919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_75583559_75594191
tx.1906	chr11	+	2806	2	ISM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	13182	834	12924	9	3prime_fragment	FALSE	canonical	3	229	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGTGATCTTTTGAG	6159	False	NA	NA	False	NA	NA	NA	75583291	75596900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_75583389_75594191
tx.1907	chr11	+	1823	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	47	230	3	-230	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	1673	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTAGTCCAGACATATT	3038	False	NA	NA	False	NA	NA	NA	75623741	75656441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
tx.1908	chr11	-	235	2	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTGGGTACTGTTT	NA	False	NA	NA	False	NA	NA	NA	75858014	75854820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_75855026_75857984
tx.1909	chr11	+	899	2	FSM	ENSMUSG00000053783.6	ENSMUST00000066408.6	921	2	22	0	22	0	multi-exon	FALSE	canonical	2	5	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGGAAGCCGATGCTT	NA	False	NA	NA	False	NA	NA	NA	75890759	75894395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_75891093_75893829
tx.191	chr1	-	770	5	ISM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	26811	-4	-2288	4	3prime_fragment	FALSE	canonical	3	868	junction_4	37.7690349360425	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGTGTGAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	63189170	63182750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115
tx.1910	chr11	-	2746	22	FSM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	17	70	4	0	multi-exon	FALSE	canonical	3	37	junction_11	13.2142642642469	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTTATTTTCTATCTC	NA	False	NA	NA	False	NA	NA	NA	76070456	75937121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
tx.1911	chr11	-	653	2	FSM	ENSMUSG00000017288.16	ENSMUST00000129256.2	650	2	0	-3	0	3	multi-exon	FALSE	canonical	3	20	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTATGTGTGTATGTTT	NA	False	NA	NA	False	NA	NA	NA	76070464	76067781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_76068209_76070238
tx.1912	chr11	+	2098	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	31	1	-18	-1	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3437	False	NA	NA	False	NA	NA	NA	76092871	76100241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
tx.1913	chr11	-	3475	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	65	0	65	0	multi-exon	FALSE	canonical	3	437	junction_1	0	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	NA	False	NA	NA	NA	76108425	76101396	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_76104750_76108303
tx.1914	chr11	-	1178	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	31	225	-19	59	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	697	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAGACAACTATATGGA	NA	False	NA	NA	False	NA	NA	NA	76134520	76112560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
tx.1915	chr11	+	1476	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	34	0	13	0	multi-exon	FALSE	canonical	3	128	junction_1	6.53197264742181	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATATGAGTGTTTGCAGG	584	False	NA	NA	False	NA	NA	NA	76134574	76141445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
tx.1916	chr11	+	1654	3	NIC	ENSMUSG00000038046.5	novel	1510	4	NA	NA	15	-12	intron_retention	FALSE	canonical	3	136	junction_2	4	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCATTTTACCCATATG	586	False	NA	NA	False	NA	NA	NA	76134576	76141433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_76135350_76138172_76138341_76140720
tx.1917	chr11	-	1723	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111695	-760	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	32.3412922387691	25	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTACTGTGTGCTTAGTT	1423	False	NA	NA	False	NA	NA	NA	76178199	76148783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178031
tx.1918	chr11	-	1717	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111634	-760	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	33.6961210145704	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTACTGTGTGCTTAGTT	1362	False	NA	NA	False	NA	NA	NA	76178260	76148783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178098
tx.1919	chr11	+	1017	4	FSM	ENSMUSG00000020843.16	ENSMUST00000120699.8	746	4	-28	-243	-28	243	multi-exon	FALSE	canonical	3	7	junction_1	120.856204731996	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTAGTATCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	76297749	76305398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_76297970_76300467_76300665_76301952_76302026_76304871
tx.192	chr1	-	2565	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	100	-4	10	4	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGTGTGAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	63215881	63182750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
tx.1920	chr11	+	1063	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	35	1719	-13	244	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	326	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTAGTATCTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	76298003	76305399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
tx.1921	chr11	+	276	2	Genic_Genomic	ENSMUSG00000024205.8	novel	311	1	NA	NA	-40	50	multi-exon	FALSE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGACCTCACCTGTAGC	NA	False	NA	NA	False	NA	NA	NA	76492104	76492505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr11_+_76492237_76492361
tx.1922	chr11	-	2187	6	ISM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	9127	1809	9115	-1809	3prime_fragment	FALSE	canonical	3	228	junction_2	29.403401163811	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCAGTCTTTTCTACTGG	NA	False	NA	NA	False	NA	NA	NA	76645278	76619236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194
tx.1923	chr11	-	1374	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	-1	2916	-1	-2916	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTCGTCTCTGCGTCAGC	NA	False	NA	NA	False	NA	NA	NA	76654406	76620343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
tx.1924	chr11	+	2247	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	250	0	15	0	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	702	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCCGGCGTGTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	76836579	76878205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
tx.1925	chr11	+	2110	11	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	735	0	171	0	3prime_fragment	FALSE	canonical	3	631	junction_3	50.0640589644907	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCCGGCGTGTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	76837064	76878205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
tx.1926	chr11	-	1956	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	6	1152	6	-1152	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGAGTTTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	76969255	76936269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
tx.1927	chr11	-	1399	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	58	6	58	-6	multi-exon	FALSE	canonical	3	152	junction_1	13.984117975602	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	NA	False	NA	NA	NA	77404138	77398930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
tx.1928	chr11	-	1484	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	52	-6	intron_retention	FALSE	canonical	3	179	junction_5	7.1386273190299	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	NA	False	NA	NA	NA	77404144	77398930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
tx.1929	chr11	+	3207	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-16	1967	-16	-1967	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAAAACTGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	77576964	77601600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
tx.193	chr1	-	2630	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	NA	NA	NA	63215846	63182754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
tx.1930	chr11	-	1740	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	259	-1	259	1	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	193	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGGTGGTCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	77784663	77771439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
tx.1931	chr11	+	1759	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	16	4	16	-2	multi-exon	FALSE	canonical	3	80	junction_1	5.93190525885234	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTCTGGCTCCCGCC	NA	False	NA	NA	False	NA	NA	NA	77923121	77928688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
tx.1932	chr11	+	2587	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	34	0	-19	0	multi-exon	FALSE	canonical	3	351	junction_3	23.4778619128744	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	103	True	NA	NA	NA	77928790	77951260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
tx.1933	chr11	+	2312	9	ISM	ENSMUSG00000061981.15	ENSMUST00000136353.2	2558	12	14526	0	14526	0	3prime_fragment	FALSE	canonical	3	351	junction_1	25.7960752828798	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	NA	False	NA	NA	NA	77945655	77951260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
tx.1934	chr11	-	2003	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	11	0	11	0	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	77971198	77964201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
tx.1935	chr11	-	1972	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	103	3	30	-3	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCAGCCTGTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	78056312	78050228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
tx.1936	chr11	-	2915	14	FSM	ENSMUSG00000017405.15	ENSMUST00000152611.8	2882	14	-33	0	-10	0	multi-exon	FALSE	canonical	3	30	junction_7	9.26148734971841	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6279	False	NA	NA	False	NA	NA	NA	78067470	78056931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
tx.1937	chr11	-	2784	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	25	0	-16	0	multi-exon	FALSE	canonical	1	11	junction_10	13.5103890486136	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6273	False	NA	NA	False	NA	NA	NA	78067476	78056931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
tx.1938	chr11	-	1384	3	ISM	ENSMUSG00000017405.15	ENSMUST00000142812.8	2876	4	-22	1592	-2	-396	5prime_fragment	FALSE	canonical	3	45	junction_1	5.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTATGTATATTAGT	6287	False	NA	NA	False	NA	NA	NA	78067462	78062408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_78063510_78063750_78063957_78067385
tx.1939	chr11	+	1023	5	NIC	ENSMUSG00000019437.18	novel	457	4	NA	NA	-27	5	intron_retention	FALSE	canonical	3	12	junction_1	80.151419201409	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCCTGTTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	78068928	78071311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_78069063_78069863_78070048_78070195_78070279_78070365_78070449_78070772
tx.194	chr1	+	805	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	304	830	0	0	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	3098	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	NA	False	NA	NA	NA	63216287	63218815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
tx.1940	chr11	+	830	3	FSM	ENSMUSG00000019437.18	ENSMUST00000108338.2	714	3	-116	0	-5	0	multi-exon	FALSE	canonical	3	157	junction_1	5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGTTCCTCAGCTTCC	NA	False	NA	NA	False	NA	NA	NA	78069471	78070701	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78069883_78070195_78070279_78070365
tx.1941	chr11	+	1063	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	14	335	14	5	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCCTGTTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	78069524	78071311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
tx.1942	chr11	-	727	4	FSM	ENSMUSG00000058546.9	ENSMUST00000127270.2	588	4	-142	3	-142	0	multi-exon	FALSE	canonical	3	10927	junction_1	3582.37128170713	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	6328	False	NA	NA	False	NA	NA	NA	78074045	78071760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628
tx.1943	chr11	-	560	5	FSM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	10927	junction_1	3598.81438810061	369	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	5963	False	NA	NA	False	NA	NA	NA	78074410	78071760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074344
tx.1944	chr11	+	1374	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	-2	-4	-2	-1	multi-exon	FALSE	canonical	3	60	junction_1	27.8790243731735	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTCTTTAAAGATTT	6023	False	NA	NA	False	NA	NA	NA	78079253	78083018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
tx.1945	chr11	+	1156	10	FSM	ENSMUSG00000002059.19	ENSMUST00000150941.8	795	10	-11	-350	-1	0	multi-exon	FALSE	canonical	2	3	junction_1	46.6883547486501	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6024	False	NA	NA	False	NA	NA	NA	78079254	78083014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78079338_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
tx.1946	chr11	+	1705	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	-20	0	-20	0	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6354	False	NA	NA	False	NA	NA	NA	78079584	78083014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
tx.1947	chr11	+	1171	4	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	99.5199589138893	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTGGTCATTTAT	NA	False	NA	NA	False	NA	NA	NA	78136586	78146318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_78136997_78141841_78142039_78145676_78145738_78145815
tx.1948	chr11	+	1021	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	243	4	243	-4	multi-exon	FALSE	canonical	3	217	junction_1	4	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTGGTCATTTAT	NA	False	NA	NA	False	NA	NA	NA	78136814	78146318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78136997_78141841_78142039_78145676
tx.1949	chr11	+	937	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2275	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	108.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTGTGTGGTCATTT	NA	False	NA	NA	False	NA	NA	NA	78138846	78146316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_78138947_78141841_78142039_78145676
tx.195	chr1	+	1738	6	ISM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	11	16365	11	443	5prime_fragment	FALSE	canonical	3	308	junction_4	44.0545116872268	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTGTTGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	63769783	63777449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937
tx.1950	chr11	+	1295	11	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	22	23391	22	-948	5prime_fragment	FALSE	canonical	3	514	junction_1	44.650195968215	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGGTGAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	78152599	78158058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922
tx.1951	chr11	+	1083	4	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	26475	43	287	-43	3prime_fragment	FALSE	canonical	3	800	junction_1	33.189690501051	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	57	False	NA	NA	False	NA	NA	NA	78179052	78181406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_78179122_78179766_78179869_78180111_78180247_78180629
tx.1952	chr11	+	3827	24	FSM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	57	3	-38	-3	multi-exon	FALSE	canonical	3	128	junction_10	25.9765053072448	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2809	False	NA	NA	False	NA	NA	NA	78192411	78213280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
tx.1953	chr11	+	1641	9	FSM	ENSMUSG00000017390.16	ENSMUST00000017534.15	2786	9	125	1020	-75	1	multi-exon	FALSE	canonical	3	130	junction_5	18.6547581061776	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCTCTGTCTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	78213918	78217587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
tx.1954	chr11	+	2313	11	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	37	-11	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	151.766300607216	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGATATGGATGACCATAA	NA	False	NA	NA	False	NA	NA	NA	78219277	78233597	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
tx.1955	chr11	+	2472	12	FSM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	23	6	23	-6	multi-exon	FALSE	canonical	3	513	junction_10	36.2694234084327	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGATGACCATAACTCGT	NA	False	NA	NA	False	NA	NA	NA	78219263	78233602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
tx.1956	chr11	+	1291	5	FSM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	30	8	6	-8	multi-exon	FALSE	canonical	3	235	junction_3	19.8557296516648	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCAGCCTGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	78234337	78239982	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239356
tx.1957	chr11	+	1349	5	FSM	ENSMUSG00000002058.14	ENSMUST00000108295.8	1371	5	15	7	15	-7	multi-exon	FALSE	canonical	3	22	junction_4	104.920207777148	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCAGCCTGTGTGTCTA	NA	False	NA	NA	False	NA	NA	NA	78234346	78239983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239290
tx.1958	chr11	+	712	4	Antisense	novelGene_ENSMUSG00000002057.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTGCCCATGCAAAAATC	3490	False	NA	NA	False	NA	NA	NA	78251561	78267329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_+_78251646_78263583_78263808_78265094_78265173_78267003
tx.1959	chr11	-	1115	5	NIC	ENSMUSG00000001095.6	novel	2412	12	NA	NA	21302	-215	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.04152298679729	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGGGTGTGTTTCCCGGT	9766	False	NA	NA	False	NA	NA	NA	78291741	78288127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_78288682_78289116_78289255_78289857_78290020_78291301_78291391_78291569
tx.196	chr1	+	2280	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	17	2189	-10	1	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGGATCAGCTGGCTGA	NA	False	NA	NA	False	NA	NA	NA	63769789	63791625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
tx.1960	chr11	+	1114	4	FSM	ENSMUSG00000020829.10	ENSMUST00000146431.3	749	4	-44	-321	9	-2	multi-exon	FALSE	canonical	3	25	junction_1	30.8796948747159	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGGCTTTGGGGCTTTC	8346	False	NA	NA	False	NA	NA	NA	78356531	78362769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78356832_78359450_78359535_78361520_78361678_78362196
tx.1961	chr11	+	1964	5	FSM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	12	2	12	-2	multi-exon	FALSE	canonical	3	60	junction_1	12.7549010188241	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGGCTTTGGGGCTTTC	8349	False	NA	NA	False	NA	NA	NA	78356534	78362769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196
tx.1962	chr11	-	1318	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	29	0	29	0	multi-exon	FALSE	canonical	3	479	junction_5	35.6561355169065	414	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1660	False	NA	NA	False	NA	NA	NA	78402969	78397880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
tx.1963	chr11	+	1980	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	74	0	74	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1709	False	NA	NA	False	NA	NA	NA	78403092	78413562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
tx.1964	chr11	+	1045	3	ISM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	7091	0	953	0	3prime_fragment	FALSE	canonical	3	1074	junction_1	38	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	5393	False	NA	NA	False	NA	NA	NA	78410109	78413562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_78410132_78411977_78412058_78412619
tx.1965	chr11	+	1024	2	ISM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	8958	0	2820	0	3prime_fragment	FALSE	canonical	3	1150	junction_1	0	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	7260	False	NA	NA	False	NA	NA	NA	78411976	78413562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_78412058_78412619
tx.1966	chr11	-	3587	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	123	58	62	-58	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCATGTTTCCAGTGAG	NA	False	NA	NA	False	NA	NA	NA	78427035	78413733	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
tx.1967	chr11	-	3283	6	ISM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	6105	57	6105	-57	3prime_fragment	FALSE	canonical	3	147	junction_2	10.6770782520313	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGTTTCCAGTGAGC	1239	False	NA	NA	False	NA	NA	NA	78420992	78413732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853
tx.1968	chr11	+	836	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-21	-233	-6	-15	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTTCTTCTATGGTG	NA	False	NA	NA	False	NA	NA	NA	78427247	78432548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
tx.1969	chr11	+	1069	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	65	7	-2	-7	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTATGGTGCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	78427251	78432556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
tx.197	chr1	-	1942	4	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-32	-5241	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4.24264068711928	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTATTTGGAAGCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	64161473	64073846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_64074924_64081472_64081597_64117865_64118494_64161360
tx.1970	chr11	+	1426	5	FSM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	-13	-246	4	-6	multi-exon	FALSE	canonical	3	238	junction_1	109.732344821388	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATGGTGCTGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	78427257	78432557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720
tx.1971	chr11	-	1334	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	41	0	41	0	multi-exon	TRUE	canonical	3	1037	junction_2	9	605	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	78441562	78432642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_78433623_78434311_78434457_78441353
tx.1972	chr11	+	549	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	0	7486	0	109	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTGTGTTTCTCATT	NA	False	NA	NA	False	NA	NA	NA	78717409	78730210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
tx.1973	chr11	-	1473	10	FSM	ENSMUSG00000001123.16	ENSMUST00000108268.10	1520	10	43	4	21	1	multi-exon	FALSE	canonical	3	15	junction_9	3.82970843102535	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGAGATGGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	78875729	78853803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
tx.1974	chr11	-	2463	9	FSM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	-1	14	-1	2	multi-exon	FALSE	canonical	3	217	junction_4	86.5338625914734	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTGCCGATATTTCTT	974	False	NA	NA	False	NA	NA	NA	79145498	79130211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
tx.1975	chr11	-	3032	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-1	846	-1	-846	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGGTATTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	79853217	79825624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
tx.1976	chr11	+	1046	2	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGGTTGATCACCTC	NA	False	NA	NA	False	NA	NA	NA	79864504	79866015	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_+_79864672_79865136
tx.1977	chr11	-	2281	2	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCGGTTTGTAGTCAAA	NA	False	NA	NA	False	NA	NA	NA	79867140	79863906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_79865963_79866915
tx.1978	chr11	-	2377	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	14	5	14	-5	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATGTATTTTGTGGTTT	4502	False	NA	NA	False	NA	NA	NA	79971803	79937323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
tx.1979	chr11	+	1854	3	ISM	ENSMUSG00000017550.15	ENSMUST00000151815.8	4572	19	31214	16	30095	-13	3prime_fragment	FALSE	canonical	3	127	junction_2	17	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	NA	False	NA	NA	False	NA	NA	NA	80023923	80026604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_80024133_80024854_80025014_80025118
tx.198	chr1	-	1446	3	ISM	ENSMUSG00000025959.14	ENSMUST00000114086.8	7662	4	42443	5338	42434	-5338	3prime_fragment	FALSE	canonical	3	7	junction_1	4.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACCCCTTGAGCCTCAC	4081	False	NA	NA	False	NA	NA	NA	64118207	64073943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_64074924_64081472_64081597_64117865
tx.1980	chr11	-	1534	4	NIC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	108.206592528675	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	NA	False	NA	NA	NA	80032979	80027503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_80028106_80028743_80028894_80030691_80031397_80032902
tx.1981	chr11	-	1293	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	15	1	15	-1	multi-exon	FALSE	canonical	3	265	junction_2	2.16024689946929	240	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCCTTCTTTGCTTA	NA	False	NA	NA	False	NA	NA	NA	80032986	80027504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
tx.1982	chr11	+	1978	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	3	3	3	-3	multi-exon	FALSE	canonical	3	52	junction_2	3.96074487943871	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTTGAGTTCATTG	NA	False	NA	NA	False	NA	NA	NA	80074679	80090580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
tx.1983	chr11	+	1840	4	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	17.6131264181639	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTTGAGTTCATTG	NA	False	NA	NA	False	NA	NA	NA	80074673	80090580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_80075082_80084711_80084875_80087698_80087774_80089386
tx.1984	chr11	+	3107	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-35	-43	0	-2	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGAGGTTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	80099909	80157636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
tx.1985	chr11	+	3013	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	0	674	0	0	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	80099909	80157638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
tx.1986	chr11	+	3225	21	FSM	ENSMUSG00000017686.18	ENSMUST00000077451.14	3297	21	70	2	5	-2	multi-exon	FALSE	canonical	3	23	junction_19	176.261425161605	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGAGGTTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	80099914	80157636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80148339_80148463_80156567
tx.1987	chr11	-	1400	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	16	3138	-3	348	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCCTAGGCAGACGCT	NA	False	NA	NA	False	NA	NA	NA	80268844	80254456	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
tx.1988	chr11	+	2220	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	16	9	-12	-6	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATACAGTTTTGATACA	NA	False	NA	NA	False	NA	NA	NA	80274144	80287065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
tx.1989	chr11	+	2316	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-76	-678	-10	-1	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTTGATACATGATT	NA	False	NA	NA	False	NA	NA	NA	80274146	80287070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
tx.199	chr1	-	1335	3	FSM	ENSMUSG00000025956.11	ENSMUST00000053469.2	2666	3	724	607	724	-607	multi-exon	FALSE	canonical	3	51	junction_1	2	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAACTTGTAGGTTAGAA	NA	False	NA	NA	False	NA	NA	NA	64655603	64646245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_64647297_64654256_64654369_64655431
tx.1990	chr11	+	1568	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	-2	1282	0	57	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	1103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	80319448	80362792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
tx.1991	chr11	+	1680	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	3	-57	1	57	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	80319451	80362792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
tx.1992	chr11	+	389	2	ISM	ENSMUSG00000017428.17	ENSMUST00000148895.9	796	8	15095	-91	8848	57	3prime_fragment	FALSE	canonical	3	930	junction_1	0	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	80362288	80362792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_80362421_80362535
tx.1993	chr11	+	1442	7	FSM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	191	0	191	0	multi-exon	FALSE	canonical	3	29	junction_1	3.67045259092421	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTAGTTACCGAGTCAA	NA	False	NA	NA	False	NA	NA	NA	80701191	80712859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
tx.1994	chr11	-	3481	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	9	-1	9	1	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2752	False	NA	NA	False	NA	NA	NA	82762027	82694646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
tx.1995	chr11	-	2315	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	11	1100	11	938	multi-exon	TRUE	canonical	3	107	junction_4	12.9099444873581	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGGTTGTTTATGGA	NA	False	NA	NA	False	NA	NA	NA	82781429	82768624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
tx.1996	chr11	-	1751	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	32	0	32	0	multi-exon	TRUE	canonical	3	193	junction_4	34.6180548590215	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8335	False	NA	NA	False	NA	NA	NA	82799205	82791593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
tx.1997	chr11	-	1709	12	ISM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	175	2	106	-2	3prime_fragment	FALSE	canonical	3	193	junction_4	34.670825137318	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCAGCTTCTTGTTC	8478	False	NA	NA	False	NA	NA	NA	82799062	82791595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917
tx.1998	chr11	+	1223	2	ISM	ENSMUSG00000087107.9	ENSMUST00000143673.2	1428	4	882	22	309	-22	3prime_fragment	FALSE	canonical	3	15	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGCCTTGCTCCTACCA	NA	False	NA	NA	False	NA	NA	NA	83115283	83117408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_83115458_83116359
tx.1999	chr11	+	511	2	FSM	ENSMUSG00000093483.2	ENSMUST00000176016.2	471	2	-41	1	3	0	multi-exon	FALSE	canonical	3	381	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTATTTGTTTGGGTA	5851	False	NA	NA	False	NA	NA	NA	83182527	83185455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_83182924_83185340
tx.2	chr1	-	1016	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	21	3166	-8	0	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	1507	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGCTCAGGTCTTTTG	1641	False	NA	NA	False	NA	NA	NA	4855941	4846599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
tx.20	chr1	-	1290	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	182	226	0	16	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	1057	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGTTTTGTAGT	NA	False	NA	NA	False	NA	NA	NA	10108170	10095051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
tx.200	chr1	-	1427	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	-11	614	-11	-607	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAACTTGTAGGTTAGAA	NA	False	NA	NA	False	NA	NA	NA	64656412	64646245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
tx.2000	chr11	+	376	3	FSM	ENSMUSG00000093483.2	ENSMUST00000176545.2	356	3	-18	-2	3	2	multi-exon	FALSE	canonical	3	49	junction_1	166	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTTTGGGTAAGATC	5851	False	NA	NA	False	NA	NA	NA	83182527	83185460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_83182660_83182799_83182924_83185340
tx.2001	chr11	-	2378	4	FSM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	11	0	7	0	multi-exon	FALSE	canonical	3	23	junction_3	16.4991582276861	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2437	False	NA	NA	False	NA	NA	NA	83189757	83185900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189537
tx.2002	chr11	-	2280	4	FSM	ENSMUSG00000018733.11	ENSMUST00000018877.9	2729	4	17	432	-2	1	multi-exon	FALSE	canonical	3	9	junction_3	22.7596133534821	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTCTTGAAGTTTT	2408	False	NA	NA	False	NA	NA	NA	83189786	83185899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189665
tx.2003	chr11	+	5363	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-71	-2023	0	0	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTGTGGTATGGACT	2179	False	NA	NA	False	NA	NA	NA	83193528	83295861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
tx.2004	chr11	+	2068	16	FSM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	25.2651714597168	5	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	8660	False	NA	NA	False	NA	NA	NA	83363917	83397569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
tx.2005	chr11	+	2074	16	FSM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	-6	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	25.2651714597168	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	8654	False	NA	NA	False	NA	NA	NA	83363911	83397569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
tx.2006	chr11	+	681	2	ISM	ENSMUSG00000020680.16	ENSMUST00000133170.2	1260	11	15723	0	15723	0	3prime_fragment	FALSE	canonical	3	139	junction_1	0	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	NA	False	NA	NA	False	NA	NA	NA	83395575	83397569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_83395931_83397243
tx.2007	chr11	-	901	3	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	50	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCATGGTGGCATTT	4742	False	NA	NA	False	NA	NA	NA	83458267	83454494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_83455094_83457579_83457647_83458032
tx.2008	chr11	-	821	2	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGCCATGGTGGCATT	4754	False	NA	NA	False	NA	NA	NA	83458255	83454495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_83455094_83458032
tx.2009	chr11	-	1082	4	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	660	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	12.9614813968157	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTGCCTCTTTTGC	NA	False	NA	NA	False	NA	NA	NA	83473161	83465483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83473098
tx.201	chr1	-	713	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	3	-5	3	5	multi-exon	FALSE	canonical	3	111	junction_1	0	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTACCTATGTGGTTT	7930	False	NA	NA	False	NA	NA	NA	64729815	64719024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_64719545_64729622
tx.2010	chr11	-	1216	5	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	658	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	25.1445819213603	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTCTGTCTGCCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	83473161	83465485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83469214_83469351_83473098
tx.2012	chr11	-	671	2	Antisense	novelGene_ENSMUSG00000000976.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCCTCCCTGACTTGC	4576	False	NA	NA	False	NA	NA	NA	83644781	83643931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_-_83644015_83644193
tx.2014	chr11	+	2215	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	81	898	81	-898	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTTGTGTGTATGGAGA	NA	False	NA	NA	False	NA	NA	NA	83832968	83853016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
tx.2015	chr11	-	1454	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	-7	0	-7	0	multi-exon	FALSE	canonical	3	59	junction_2	13.5	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTATTAATCATTTTG	NA	False	NA	NA	False	NA	NA	NA	83959190	83938866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_83940137_83941657_83941747_83959095
tx.2016	chr11	-	2150	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	1	0	1	0	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	NA	False	NA	NA	NA	84020425	83969745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
tx.2017	chr11	-	2200	17	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	180.504674454708	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	NA	False	NA	NA	NA	84020439	83969745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84016596_84016633_84017813_84017922_84020362
tx.2018	chr11	-	1802	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	13	7	13	-7	multi-exon	TRUE	canonical	3	481	junction_8	26.3136793744665	173	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTCACTGTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	84404335	84313687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
tx.2019	chr11	-	2491	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	-14	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_4	44.51404272811	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGGAGTTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	84710355	84703886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
tx.202	chr1	-	701	3	FSM	ENSMUSG00000067299.12	ENSMUST00000045028.15	613	3	-58	-30	-58	30	multi-exon	FALSE	canonical	3	39	junction_1	4.5	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATTTGCTTCTGTTTTTT	7562	False	NA	NA	False	NA	NA	NA	65102669	65101000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_65101342_65102217_65102461_65102552
tx.2020	chr11	-	1460	7	FSM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	-75	-131	-45	131	multi-exon	FALSE	canonical	3	39	junction_6	7.19760762722973	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACCTTCAGAAGTATCTT	NA	False	NA	NA	False	NA	NA	NA	84719865	84711550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716404_84719576
tx.2021	chr11	-	2526	13	FSM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	226	-224	226	-221	multi-exon	FALSE	canonical	3	231	junction_7	87.5523256242929	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	NA	False	NA	NA	NA	84760802	84723407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
tx.2022	chr11	-	1605	11	ISM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	226	3599	226	16	5prime_fragment	FALSE	canonical	3	231	junction_5	95.5680385903153	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAGAAAAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	84760802	84727230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
tx.2023	chr11	-	1354	6	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	226	551	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	192.335748107314	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGTTTTGTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	84760802	84742656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
tx.2024	chr11	-	989	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	7	2	7	-2	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	214	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTTCCCTTAGTAA	NA	False	NA	NA	False	NA	NA	NA	84807185	84801777	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
tx.2025	chr11	-	3949	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	294	2220	294	-2220	multi-exon	TRUE	canonical	3	360	junction_12	22.6180544894756	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAACTTAAGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	85125662	85080307	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
tx.2026	chr11	+	2492	22	ISM	ENSMUSG00000059439.16	ENSMUST00000092821.10	2769	24	-37	241353	8	-19047	5prime_fragment	FALSE	canonical	3	82	junction_16	16.0315731563836	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTACACAGCATTTC	3486	False	NA	NA	False	NA	NA	NA	85244000	85474823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722
tx.2027	chr11	+	2796	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	-18	1645	-18	-1645	multi-exon	FALSE	canonical	3	24	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTCTCTGTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	86092177	86100373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_86092379_86097778
tx.2028	chr11	+	1973	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	2	2477	2	-2477	multi-exon	TRUE	canonical	3	265	junction_2	21.9146070008111	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGACCTGTTATGTA	NA	False	NA	NA	False	NA	NA	NA	86375484	86387374	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
tx.2029	chr11	-	2337	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	32	3162	1	0	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCTGTGGCTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	86435599	86392858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
tx.203	chr1	-	2201	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	95	6	95	-4	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	NA	False	NA	NA	NA	65218245	65197780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
tx.2030	chr11	+	2185	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	-36	-278	-36	278	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTCATATAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	86435780	86458464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
tx.2031	chr11	-	1960	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	-1	828	-1	237	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	451	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCCGTTTTCTTTAGT	9871	False	NA	NA	False	NA	NA	NA	86574663	86475518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
tx.2032	chr11	+	718	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	53	2267	53	-2267	multi-exon	FALSE	canonical	3	249	junction_1	0	326	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTCCCATGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	86574863	86581016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_86574950_86580384
tx.2033	chr11	-	2133	9	ISM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	52549	-2	-1255	2	3prime_fragment	FALSE	canonical	3	1101	junction_5	58.1741727487379	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGAATTGCAGTTTTA	6588	False	NA	NA	False	NA	NA	NA	86595778	86585478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713
tx.2034	chr11	-	1544	9	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	18410	899	-57	-899	3prime_fragment	FALSE	canonical	3	128	junction_4	22.7252612746256	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGGCCTTCTTATTGCT	8620	False	NA	NA	False	NA	NA	NA	86680162	86660570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992
tx.2035	chr11	-	2779	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	135	899	135	-899	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGGCCTTCTTATTGCT	8662	False	NA	NA	False	NA	NA	NA	86698437	86660570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
tx.2036	chr11	-	2385	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	-49	0	-49	0	multi-exon	FALSE	canonical	3	37	junction_6	8.73053390247253	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGATTCCAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	86964937	86924692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
tx.2037	chr11	-	3206	4	FSM	ENSMUSG00000020495.14	ENSMUST00000020801.14	3218	4	1	11	1	-7	multi-exon	FALSE	canonical	3	76	junction_2	5.65685424949238	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATGTATACTTGGTA	NA	False	NA	NA	False	NA	NA	NA	86977599	86968568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_86968977_86970991_86971865_86974425_86974572_86975820
tx.2038	chr11	+	1242	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	24	1771	7	757	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTTTAGACTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	87000083	87013690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
tx.2039	chr11	+	3450	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	30189	at_least_one_novel_splicesite	TRUE	canonical	3	225	junction_24	67.5794671109502	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTCATAATTTGT	2027	False	NA	NA	False	NA	NA	NA	87018013	87141698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
tx.204	chr1	+	1978	8	NIC	ENSMUSG00000025949.17	novel	4266	13	NA	NA	-18	615	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	21.9795823621907	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAGTCAGGAAATTCCA	NA	False	NA	NA	False	NA	NA	NA	65225823	65256036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092
tx.2040	chr11	-	1517	7	ISM	ENSMUSG00000007646.14	ENSMUST00000007790.11	1632	9	3438	-544	2907	38	3prime_fragment	FALSE	canonical	3	130	junction_1	13.4618803375391	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTATATGTATCTGT	1712	False	NA	NA	False	NA	NA	NA	87292342	87269378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215
tx.2041	chr11	-	2013	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	23	1908	6	38	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTATATGTATCTGT	NA	False	NA	NA	False	NA	NA	NA	87295326	87269378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
tx.2042	chr11	-	885	2	Antisense	novelGene_ENSMUSG00000010342.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACAAAAACACCCAAGGG	NA	False	NA	NA	False	NA	NA	NA	87344429	87343327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_-_87343868_87344084
tx.2043	chr11	+	708	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	-1	-1	-1	1	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	423	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGGTACTGAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	87628376	87634444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
tx.2044	chr11	+	2428	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5029	1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	31.5170080957562	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGGACTCTCGTTCT	1427	False	NA	NA	False	NA	NA	NA	87739011	87754630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
tx.2045	chr11	+	2499	18	FSM	ENSMUSG00000034121.13	ENSMUST00000038196.7	2499	18	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	22.9555008070187	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6456	False	NA	NA	False	NA	NA	NA	87744040	87754629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
tx.2046	chr11	+	1949	13	ISM	ENSMUSG00000034121.13	ENSMUST00000038196.7	2499	18	3593	0	245	0	3prime_fragment	FALSE	canonical	3	152	junction_5	15.9850190282443	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	2434	False	NA	NA	False	NA	NA	NA	87747633	87754629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
tx.2047	chr11	-	1037	4	ISM	ENSMUSG00000052234.3	ENSMUST00000049768.4	2689	13	6805	0	3037	0	3prime_fragment	FALSE	canonical	3	12	junction_2	4.89897948556636	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCCGCTGTCTCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	87759557	87754825	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_87755231_87755520_87755734_87756230_87756469_87759376
tx.2048	chr11	-	2227	3	NNC	ENSMUSG00000020483.15	novel	2476	3	NA	NA	5	-7	intron_retention	FALSE	canonical	3	31	junction_2	300	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	87878354	87870357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_87872397_87874697_87874837_87878305
tx.2049	chr11	-	707	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	31	1738	31	-1108	multi-exon	FALSE	canonical	3	615	junction_2	8	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	87878328	87872088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_87872397_87874697_87874837_87878068
tx.205	chr1	+	1158	3	ISM	ENSMUSG00000015222.19	ENSMUST00000156636.9	546	5	31	57299	-9	879	5prime_fragment	FALSE	canonical	3	22	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	66214462	66362477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_66214655_66290820_66290872_66361562
tx.2050	chr11	-	704	3	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44298	-1108	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	289.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	87922657	87872088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_87872397_87874697_87874837_87922400
tx.2051	chr11	+	2340	3	ISM	ENSMUSG00000018379.18	ENSMUST00000107920.10	1209	5	787	-1083	1	3	intron_retention	FALSE	canonical	3	1111	junction_2	234.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	7467	False	NA	NA	False	NA	NA	NA	87939415	87942319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_87939501_87939868_87940042_87940237
tx.2052	chr11	+	3604	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-22	1001	-22	-1001	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCTATGACTTTGTT	NA	False	NA	NA	False	NA	NA	NA	87959082	87974554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
tx.2053	chr11	+	1316	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	16	0	-7	0	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	286	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	88095229	88102333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
tx.2054	chr11	+	1404	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	110.143939915004	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	88095236	88102333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
tx.2055	chr11	+	1235	4	ISM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	777	0	744	0	3prime_fragment	FALSE	canonical	3	277	junction_2	16.0485374896143	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	88096013	88102333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_88096186_88100678_88100757_88100929_88101057_88101475
tx.2056	chr11	-	1459	14	FSM	ENSMUSG00000069769.14	ENSMUST00000092794.12	1855	14	-168	564	-40	-564	multi-exon	FALSE	canonical	0	0	junction_9	5.8895153054003	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGGTTTGGTTCTGT	1942	False	NA	NA	False	NA	NA	NA	88609095	88235278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_88235487_88237878_88237952_88239609_88239819_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530_88608572_88608854
tx.2057	chr11	-	3695	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	63	0	63	0	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	88755349	88721617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
tx.2058	chr11	-	2963	2	ISM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	12	12289	12	-4109	5prime_fragment	FALSE	canonical	3	913	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAATAAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	88755400	88733906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_88736692_88755222
tx.2059	chr11	-	2048	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	49	0	49	0	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	961	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	5250	False	NA	NA	False	NA	NA	NA	88846242	88814845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
tx.206	chr1	+	2386	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	11	295	11	-295	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	311	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGTTTGTAAGTATTG	NA	False	NA	NA	False	NA	NA	NA	66740000	66758669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
tx.2060	chr11	-	844	2	FSM	ENSMUSG00000057534.14	ENSMUST00000061938.14	819	2	-25	0	-11	0	multi-exon	FALSE	canonical	3	61	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	6794	False	NA	NA	False	NA	NA	NA	88857768	88855483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_88856100_88857540
tx.2061	chr11	+	1021	2	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	1	-17540	intron_retention	FALSE	canonical	3	1774	junction_1	0	321	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9432	False	NA	NA	False	NA	NA	NA	88861078	88864240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_88861306_88863446
tx.2062	chr11	+	2607	7	FSM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	22.1616535684702	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	NA	False	NA	NA	False	NA	NA	NA	88864760	88882439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
tx.2063	chr11	+	2341	6	ISM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	7132	0	-6512	0	3prime_fragment	FALSE	canonical	3	336	junction_1	23.4486673395313	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	7103	False	NA	NA	False	NA	NA	NA	88871892	88882439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
tx.2064	chr11	-	1873	5	NIC	ENSMUSG00000020553.9	novel	2723	6	NA	NA	26	-756	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	18.1435250158287	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTGTCTCCCTCTTA	NA	False	NA	NA	False	NA	NA	NA	89893694	89874246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_89875583_89878021_89878194_89879520_89879601_89881896_89882015_89893527
tx.2065	chr11	-	1957	6	FSM	ENSMUSG00000020553.9	ENSMUST00000020864.9	2723	6	10	756	10	-756	multi-exon	FALSE	canonical	3	31	junction_1	5.78273291792038	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTGTCTCCCTCTTA	NA	False	NA	NA	False	NA	NA	NA	89893710	89874246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_89875583_89876918_89876987_89878021_89878194_89879520_89879601_89881896_89882015_89893527
tx.2066	chr11	+	2617	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	44	16	44	-16	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGTCTGGAGCATAT	NA	False	NA	NA	False	NA	NA	NA	90140345	90169399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
tx.2067	chr11	+	1232	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	-3	-5	-3	5	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGACAACTTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	90528995	90535762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
tx.2068	chr11	-	2070	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	13	2225	-6	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTTGTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	90578420	90536515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
tx.2069	chr11	-	1880	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	29	704	29	-704	multi-exon	TRUE	canonical	3	770	junction_1	49.2161035848126	503	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACATGATTTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	93776563	93750772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
tx.207	chr1	-	1903	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	0	13	0	-13	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGACCGTGTGAGGCC	NA	False	NA	NA	False	NA	NA	NA	66902436	66870010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
tx.2070	chr11	-	665	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	347	0	-129	0	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	2111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	NA	False	NA	NA	NA	93846738	93840639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
tx.2071	chr11	-	699	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	234	2248	-15	245	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	825	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGTACAGCTCTGCA	619	False	NA	NA	False	NA	NA	NA	93859113	93850052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
tx.2072	chr11	+	1338	5	ISM	ENSMUSG00000020859.17	ENSMUST00000024979.15	6756	27	64142	2585	25719	-2582	3prime_fragment	FALSE	canonical	3	69	junction_2	4.76969600708473	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCCTGCTTCTCTGAAT	2788	False	NA	NA	False	NA	NA	NA	93999332	94014324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
tx.2073	chr11	+	519	4	FSM	ENSMUSG00000086003.8	ENSMUST00000155965.2	473	4	-52	6	-35	-6	multi-exon	FALSE	canonical	3	69	junction_1	38.4967531098403	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTATTAGTGTTTACCTG	NA	False	NA	NA	False	NA	NA	NA	94024275	94046596	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_94024382_94029312_94029490_94046281_94046324_94046402
tx.2074	chr11	+	351	3	ISM	ENSMUSG00000086003.8	ENSMUST00000155965.2	473	4	5051	2	2893	-2	3prime_fragment	FALSE	canonical	3	102	junction_1	30	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTTTACCTGCTTG	NA	False	NA	NA	False	NA	NA	NA	94029378	94046600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_94029490_94046281_94046324_94046402
tx.2075	chr11	+	2213	2	NNC	ENSMUSG00000037573.6	novel	2288	2	NA	NA	-1611	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATCCTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	94100668	94106321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_94100872_94104311
tx.2076	chr11	-	1945	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	29	76	-1	2	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATTGTCTGTGTCATTG	NA	False	NA	NA	False	NA	NA	NA	94212785	94181962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
tx.2077	chr11	-	999	8	ISM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	32	5891	2	-15	5prime_fragment	FALSE	canonical	3	230	junction_7	21.9981446341945	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGGAAAAAGAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	94212782	94187855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
tx.2078	chr11	+	1367	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	207	1913	-46	5	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGTAGTCTTGAGAGGC	4201	False	NA	NA	False	NA	NA	NA	94219033	94230754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
tx.2079	chr11	+	1113	2	FSM	ENSMUSG00000020864.14	ENSMUST00000124087.2	828	2	168	-453	168	453	multi-exon	FALSE	canonical	3	505	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGTATCAAAGATAAAG	NA	False	NA	NA	False	NA	NA	NA	94229283	94231427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_94229348_94230378
tx.208	chr1	-	1594	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	9	2858	2	0	multi-exon	FALSE	canonical	3	327	junction_5	113.959902487673	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	NA	False	NA	NA	NA	67078022	67042533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
tx.2080	chr11	-	937	4	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-349	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	32.8937684067971	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	586	False	NA	NA	False	NA	NA	NA	94242361	94234120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242267
tx.2081	chr11	-	1133	4	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40888	0	-902	0	intron_retention	FALSE	canonical	3	69	junction_3	10.6249183003395	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	3	True	NA	NA	False	NA	NA	NA	94242914	94234120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624
tx.2082	chr11	-	1110	5	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40789	0	-1001	0	3prime_fragment	FALSE	canonical	3	20	junction_4	28.5164426252645	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	NA	False	NA	NA	False	NA	NA	NA	94243013	94234120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905
tx.2083	chr11	-	2308	8	ISM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	183	2030	183	-2030	intron_retention	FALSE	canonical	3	12	junction_3	10.4295498562537	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATACTCTATGTATGTCT	3434	False	NA	NA	False	NA	NA	NA	94439842	94432653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296
tx.2084	chr11	-	2083	9	FSM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	-8	2068	-8	-2068	multi-exon	FALSE	canonical	3	12	junction_3	10.3319891598859	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTATCCAAGGCCACT	3243	False	NA	NA	False	NA	NA	NA	94440033	94432691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
tx.2085	chr11	+	2628	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	206	3	159	-3	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCTTTCTCCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	94520798	94536039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
tx.2086	chr11	+	2115	3	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	8819	0	8772	0	3prime_fragment	FALSE	canonical	3	2480	junction_2	109.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	94529411	94536042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_94529430_94532045_94532220_94534119
tx.2087	chr11	+	2099	2	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	11451	0	11404	0	3prime_fragment	FALSE	canonical	3	2480	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	94532043	94536042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_94532220_94534119
tx.2088	chr11	-	2225	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	219	0	-74	0	multi-exon	TRUE	canonical	3	178	junction_8	32.4422563950167	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4622	False	NA	NA	False	NA	NA	NA	94544571	94535821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
tx.2089	chr11	+	749	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	7	0	-2	0	multi-exon	FALSE	canonical	3	766	junction_3	47.8632310744781	514	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAAAGGGACAGGACAG	NA	False	NA	NA	False	NA	NA	NA	94544599	94550915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
tx.209	chr1	-	1405	10	NIC	ENSMUSG00000026000.17	novel	1385	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	146.548774167089	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	NA	False	NA	NA	NA	67078043	67042533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
tx.2090	chr11	+	1309	5	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	13784	1175	4640	-1175	3prime_fragment	FALSE	canonical	2	4	junction_1	14.6180539060437	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAATAAATAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	94840833	94842693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
tx.2091	chr11	+	1019	4	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	14157	1178	5013	-1178	3prime_fragment	FALSE	canonical	3	18	junction_2	9.67241208569794	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAAATAAATAACTT	NA	False	NA	NA	False	NA	NA	NA	94841206	94842690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_94841400_94841534_94841726_94841926_94842170_94842298
tx.2092	chr11	-	1924	4	ISM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	29171	0	1463	0	3prime_fragment	FALSE	canonical	3	712	junction_2	46.1615520632581	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	95171257	95165084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216
tx.2093	chr11	-	3428	14	FSM	ENSMUSG00000038909.17	ENSMUST00000107733.10	3470	14	42	0	-3	0	multi-exon	FALSE	canonical	3	281	junction_9	177.090656421269	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	95201030	95165084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
tx.2094	chr11	-	3520	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	40	0	2	0	multi-exon	FALSE	canonical	3	566	junction_10	130.748239149965	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	95201032	95165084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
tx.2095	chr11	-	3437	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	222.401444165419	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	95201056	95165084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
tx.2096	chr11	+	1313	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	210	0	-4	0	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	NA	False	NA	NA	NA	95275727	95282602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
tx.2097	chr11	+	2492	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	-2	391	-2	-391	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTATCTCTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	95304903	95383841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
tx.2098	chr11	+	2662	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	19	382	19	-382	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTCTTTTGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	95304942	95383850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
tx.2099	chr11	-	3410	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	36	0	36	0	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACGATGCCAAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	95478525	95459643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
tx.21	chr1	+	2537	7	FSM	ENSMUSG00000056763.17	ENSMUST00000117415.8	1272	7	-45	-1220	0	5	multi-exon	FALSE	canonical	2	35	junction_1	34.3640639169597	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCTGTTCCTCATGT	NA	False	NA	NA	False	NA	NA	NA	10108441	10138563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
tx.210	chr1	-	688	3	ISM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	56406	2828	56406	-2828	3prime_fragment	FALSE	canonical	3	41	junction_2	2.5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	71085899	71069484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_71070012_71070517_71070616_71085836
tx.2100	chr11	+	1028	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	43	728	0	337	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	723	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCTTTTATTGTTACAC	NA	False	NA	NA	False	NA	NA	NA	95557825	95570871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
tx.2101	chr11	+	1709	6	ISM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	1078	6	971	-6	3prime_fragment	FALSE	canonical	3	4384	junction_2	706.937507846344	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCACTCGGGGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	95558860	95571593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
tx.2102	chr11	+	557	4	FSM	ENSMUSG00000038811.14	ENSMUST00000107714.9	558	4	-2	3	-2	-3	multi-exon	FALSE	canonical	2	7	junction_2	4.54606056566195	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTCGGAGTGGATTCTC	NA	False	NA	NA	False	NA	NA	NA	95733118	95736557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_95733253_95734637_95734722_95735876_95735967_95736308
tx.2103	chr11	+	355	2	FSM	ENSMUSG00000086015.2	ENSMUST00000146868.2	1269	2	0	914	0	-914	multi-exon	TRUE	canonical	3	111	junction_1	0	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGCTATTGTATAAGTC	1026	False	NA	NA	False	NA	NA	NA	95749690	95750956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_95749909_95750819
tx.2104	chr11	-	2981	11	FSM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	0	-1259	0	1259	multi-exon	FALSE	canonical	3	16	junction_4	6.67907179179862	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAAAGATTGTGAG	2890	False	NA	NA	False	NA	NA	NA	95805717	95755509	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
tx.2105	chr11	-	3425	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-3	1671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	240.619364498015	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCAATGGTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	95873440	95852590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95871957_95873327
tx.2106	chr11	-	2405	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-3	730	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTATGGCTGAGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	95873440	95853531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
tx.2107	chr11	-	2837	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-5	730	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_5	125.171983727207	44	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTATGGCTGAGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	95896771	95853531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
tx.2108	chr11	-	2840	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-5	5543	-5	730	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTATGGCTGAGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	95896771	95853531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
tx.2109	chr11	-	2402	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-3	730	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	204.16338161025	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTATGGCTGAGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	95873440	95853531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
tx.211	chr1	+	2589	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	29	227	0	-227	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	366	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	NA	False	NA	NA	NA	71596337	71618563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
tx.2110	chr11	+	796	2	NNC	ENSMUSG00000099928.2	novel	422	3	NA	NA	1276	49	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTCTGTCCCCA	NA	False	NA	NA	False	NA	NA	NA	95897990	95898930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_95898430_95898573
tx.2111	chr11	+	945	8	FSM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	44	15	-22	-15	multi-exon	FALSE	canonical	3	665	junction_5	23.859281341282	344	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTCCAAGTTATTTTT	3241	False	NA	NA	False	NA	NA	NA	95925754	95938241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
tx.2112	chr11	-	603	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	-3	-4	-3	1	multi-exon	FALSE	canonical	3	5157	junction_4	2293.78611688187	2835	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	3527	False	NA	NA	False	NA	NA	NA	95966448	95963811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
tx.2113	chr11	-	581	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	0	4134	0	1	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	3030	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	3479	False	NA	NA	False	NA	NA	NA	95966496	95963811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
tx.2114	chr11	-	1576	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	2	43	0	-43	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	222	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGCTGTGTTGATT	4213	False	NA	NA	False	NA	NA	NA	96002788	95990194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
tx.2115	chr11	+	1377	2	FSM	ENSMUSG00000049604.4	ENSMUST00000062709.4	2206	2	-24	853	-24	-853	multi-exon	FALSE	canonical	2	9	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTTTCCTCTCAGATT	3920	False	NA	NA	False	NA	NA	NA	96085117	96087420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96085873_96086798
tx.2116	chr11	+	1269	2	FSM	ENSMUSG00000078706.5	ENSMUST00000150490.3	3257	2	-475	2463	64	542	multi-exon	FALSE	canonical	3	27	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTGTGTGTGTGTG	8339	False	NA	NA	False	NA	NA	NA	96141994	96153061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96142640_96152437
tx.2117	chr11	+	1321	2	FSM	ENSMUSG00000038721.9	ENSMUST00000049352.8	1291	2	-27	-3	-27	3	multi-exon	FALSE	canonical	3	4	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGCTGTGTTTTCTGTC	57	False	NA	NA	False	NA	NA	NA	96177421	96180991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96177954_96180202
tx.2118	chr11	-	2171	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	28	-2	0	2	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGTTGCAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	96668357	96658700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
tx.2119	chr11	+	1165	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	188	junction_5	206.095705923243	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	96679960	96698975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96698628
tx.212	chr1	+	1153	11	ISM	ENSMUSG00000026192.14	ENSMUST00000155769.8	1631	12	0	2456	0	-2053	5prime_fragment	TRUE	canonical	3	576	junction_4	25.6717743835521	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAACTACTGTGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	71596337	71610066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998
tx.2120	chr11	+	1271	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-22	2	0	-2	multi-exon	FALSE	canonical	3	29	junction_5	266.87570140423	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATCTGTCTTTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	96679962	96699464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
tx.2121	chr11	+	2198	5	ISM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-19	491	3	0	5prime_fragment	FALSE	canonical	3	583	junction_4	77.1508263079534	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	96679965	96698975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441
tx.2122	chr11	+	1011	5	NNC	ENSMUSG00000018666.14	novel	2377	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_4	247.637335634189	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	96679965	96698975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96698628
tx.2123	chr11	-	3443	3	ISM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	1712	17	424	0	3prime_fragment	FALSE	canonical	3	1322	junction_1	36.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	289	False	NA	NA	False	NA	NA	NA	96713127	96708256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_96711343_96712076_96712236_96712929
tx.2124	chr11	-	3536	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	-6	17	-6	0	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	NA	False	NA	NA	NA	96714845	96708256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
tx.2125	chr11	+	930	9	FSM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_8	11.8420595759353	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCTTTCTTGACTTTG	775	False	NA	NA	False	NA	NA	NA	96740701	96752029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
tx.2126	chr11	-	1968	13	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	109	360	5	30	intron_retention	FALSE	canonical	3	982	junction_6	81.183776430735	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCCTGCTTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	96807213	96798611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
tx.2127	chr11	-	1866	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	24	360	24	30	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	353	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCCTGCTTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	96807298	96798611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
tx.2128	chr11	+	1363	2	FSM	ENSMUSG00000047040.10	ENSMUST00000054311.6	1342	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGGTCTTATTTATACAC	NA	False	NA	NA	False	NA	NA	NA	96820106	96826474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96820336_96825340
tx.2129	chr11	-	2015	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	-23	2	-23	-2	multi-exon	FALSE	canonical	3	181	junction_4	10.434983894999	196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTAACTTGATTCC	NA	False	NA	NA	False	NA	NA	NA	96834835	96828652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
tx.213	chr1	+	619	2	NIC	ENSMUSG00000073652.11	novel	826	3	NA	NA	-22	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGTGTCAGTAGTCATT	NA	False	NA	NA	False	NA	NA	NA	71691973	71696617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_71692179_71696203
tx.2130	chr11	-	1506	3	ISM	ENSMUSG00000018678.14	ENSMUST00000107623.8	2907	7	12483	-136	12483	4	3prime_fragment	FALSE	canonical	3	445	junction_2	23.5	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCGTTTGGCAGTTGGG	NA	False	NA	NA	False	NA	NA	NA	96847008	96844162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_96845397_96846600_96846795_96846930
tx.2131	chr11	-	2888	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	33	1	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTGTAACTGCTTGA	NA	False	NA	NA	False	NA	NA	NA	96868504	96844297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
tx.2132	chr11	-	1411	3	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	30	-6518	combination_of_known_splicesites	FALSE	canonical	3	301	junction_2	103	31	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAACAGCAAGAATGAG	NA	False	NA	NA	False	NA	NA	NA	96868507	96851562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_96852836_96854190_96854268_96868446
tx.2133	chr11	+	1536	8	FSM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	-4	-2	-4	2	multi-exon	FALSE	canonical	3	80	junction_5	16.9597362320652	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATCTCAAGTCTATTGA	NA	False	NA	NA	False	NA	NA	NA	96920759	96924786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
tx.2134	chr11	+	1485	8	NNC	ENSMUSG00000020877.12	novel	826	3	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	41.1958983494271	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGATCTCAAGTCTAT	NA	False	NA	NA	False	NA	NA	NA	96920924	96924783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_96920999_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
tx.2135	chr11	+	1685	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	20	3	-15	-3	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	325	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCCTATGTTTATATCT	893	False	NA	NA	False	NA	NA	NA	96932405	96940036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
tx.2136	chr11	+	3621	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	150	0	-42	0	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	96941603	96959730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
tx.2137	chr11	+	1595	6	ISM	ENSMUSG00000038534.20	ENSMUST00000168565.2	3535	24	14948	0	-1115	0	3prime_fragment	FALSE	canonical	3	70	junction_1	34.0141147172758	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	96956593	96959730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
tx.2138	chr11	+	1367	4	ISM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	313	-633	313	0	3prime_fragment	FALSE	canonical	3	130	junction_3	12.5521135891752	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	96958021	96959730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_96958176_96958259_96958387_96958490_96958614_96958767
tx.2139	chr11	+	1368	4	NNC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	329	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	66.0504857413378	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	96958037	96959730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_96958176_96958242_96958387_96958490_96958614_96958767
tx.214	chr1	-	1188	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	-2	0	-2	0	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTATCTTTTAAGGATT	NA	False	NA	NA	False	NA	NA	NA	72323475	72298330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
tx.2140	chr11	-	1405	3	FSM	ENSMUSG00000001440.6	ENSMUST00000132633.2	643	3	216	-978	216	978	multi-exon	FALSE	canonical	3	1118	junction_2	60	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	97054832	97052357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_97053508_97054178_97054341_97054739
tx.2141	chr11	-	4143	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-67	1818	-67	978	multi-exon	TRUE	canonical	3	682	junction_21	133.681077140662	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	97078774	97052357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
tx.2142	chr11	+	1490	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	132	809	-60	-809	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	643	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	NA	NA	NA	97206673	97219937	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
tx.2143	chr11	+	619	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	97489329	97513719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
tx.2144	chr11	+	1166	3	ISM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-13	3566	-13	296	5prime_fragment	FALSE	canonical	3	106	junction_2	5.5	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGAAGTTTCTACCCT	NA	False	NA	NA	False	NA	NA	NA	97489323	97510153	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_97489494_97505749_97505855_97509262
tx.2145	chr11	+	733	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	4	0	4	0	multi-exon	FALSE	canonical	3	940	junction_1	75.5	577	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2456	False	NA	NA	False	NA	NA	NA	97576782	97579447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_97577042_97577326_97577447_97579093
tx.2146	chr11	-	1770	10	ISM	ENSMUSG00000018537.17	ENSMUST00000103148.8	1438	11	-69	-28	-62	0	intron_retention	FALSE	canonical	3	57	junction_9	50.8265022732564	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCAGATTAATTTAAAT	NA	False	NA	NA	False	NA	NA	NA	97590536	97580617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590031
tx.2147	chr11	-	1368	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	-13	992	-13	5	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATACTTATTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	97590487	97580640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
tx.2148	chr11	+	747	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	20	-1	-15	1	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	1011	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	97594244	97604327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
tx.2149	chr11	-	3140	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	-16	-19	-16	19	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGCCTGGTACTGAGT	7419	False	NA	NA	False	NA	NA	NA	97657398	97636421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
tx.215	chr1	+	2504	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	46	-1	46	1	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	368	False	NA	NA	False	NA	NA	NA	72346631	72434112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
tx.2150	chr11	-	532	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	33	494	-22	17	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	6500	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCTTTTCCAATATCAG	NA	False	NA	NA	False	NA	NA	NA	97673230	97668846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
tx.2151	chr11	-	2032	2	Antisense	novelGene_ENSMUSG00000086917.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCCTTGGGTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	97794565	97782720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_-_97784581_97794393
tx.2152	chr11	-	1194	5	NIC	ENSMUSG00000038352.16	novel	1571	6	NA	NA	41	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.19178633370093	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCACTTCTTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	97886714	97880403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_97881166_97883107_97883260_97885163_97885312_97885892_97885954_97886643
tx.2153	chr11	-	1334	6	FSM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	237	0	-15	0	multi-exon	FALSE	canonical	1	2	junction_2	2.57681974534503	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCACTTCTTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	97886770	97880403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163_97885312_97885892_97885954_97886643
tx.2154	chr11	+	718	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	29	4	-4	-4	multi-exon	FALSE	canonical	3	9068	junction_1	2898.60244945732	1859	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTTTTGGCTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	97917778	97921314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
tx.2155	chr11	-	2719	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	7	5298	7	300	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTATTGCAGATGCTG	NA	False	NA	NA	False	NA	NA	NA	98084112	98048278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
tx.2156	chr11	-	2526	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	0	294	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCTGACCTTATTGCAG	NA	False	NA	NA	False	NA	NA	NA	98084119	98048284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
tx.2157	chr11	-	1390	10	FSM	ENSMUSG00000018160.16	ENSMUST00000129557.2	1372	10	-17	-1	0	1	multi-exon	FALSE	canonical	3	39	junction_1	68.4675285747617	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGACTTTGCATATTTG	NA	False	NA	NA	False	NA	NA	NA	98084119	98060735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_98061267_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
tx.2158	chr11	+	2062	15	FSM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	21	-13	21	0	multi-exon	TRUE	canonical	3	120	junction_11	11.573412528335	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGATGGTGCATTCCT	896	False	NA	NA	False	NA	NA	NA	98249214	98271938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
tx.2159	chr11	-	2369	8	FSM	ENSMUSG00000038208.14	ENSMUST00000090827.12	2419	8	50	0	-3	0	multi-exon	FALSE	canonical	3	39	junction_7	8.7084289452161	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTCTGCTACTCTAT	NA	False	NA	NA	False	NA	NA	NA	98291266	98279502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
tx.216	chr1	+	444	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	-23	137	-23	59	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	2395	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTCGAAAGATGCTT	NA	False	NA	NA	False	NA	NA	NA	72750425	72752835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
tx.2160	chr11	-	726	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	9	12	9	-12	multi-exon	FALSE	canonical	3	749	junction_2	62.9567752950829	384	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGTCAACTGGCGTG	NA	False	NA	NA	False	NA	NA	NA	98329808	98328545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
tx.2161	chr11	+	2229	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	166	2	-48	-2	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGAGTCCTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	98337825	98346197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
tx.2162	chr11	-	2058	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	123	3	123	-3	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTGGCCTCTGCTTC	1446	False	NA	NA	False	NA	NA	NA	98478071	98472084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
tx.2163	chr11	-	1927	3	ISM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	3239	5	3239	-5	3prime_fragment	FALSE	canonical	3	195	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCATGTCTGGCCTCTGCT	4562	False	NA	NA	False	NA	NA	NA	98474955	98472086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_98473674_98473961_98474114_98474767
tx.2164	chr11	+	949	4	ISM	ENSMUSG00000017204.5	ENSMUST00000017348.3	2726	12	8500	1055	8500	-1055	3prime_fragment	FALSE	canonical	2	2	junction_1	0.471404520791032	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACTTTGAGTCACTTCA	NA	False	NA	NA	False	NA	NA	NA	98563676	98567479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_98563957_98564431_98564547_98566698_98566773_98566999
tx.2165	chr11	+	2135	12	FSM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	12	1	1	-1	multi-exon	FALSE	canonical	3	1019	junction_3	95.9435956889203	448	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTGTGCACGGTGTCA	NA	False	NA	NA	False	NA	NA	NA	98573391	98586804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
tx.2166	chr11	-	3390	26	FSM	ENSMUSG00000017210.15	ENSMUST00000017354.13	3410	26	16	4	-1	-4	multi-exon	TRUE	canonical	3	102	junction_19	25.7353919729232	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTGTGTGGGGAC	NA	False	NA	NA	False	NA	NA	NA	98620245	98595420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
tx.2167	chr11	+	2298	10	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.1592370895043	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGCCTCCTCCAGG	5125	False	NA	NA	False	NA	NA	NA	98631471	98659832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_98631514_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
tx.2168	chr11	+	2055	9	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	11680	0	-95	0	3prime_fragment	FALSE	canonical	3	14	junction_5	13.1808336231059	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGCCTCCTCCAGG	NA	False	NA	NA	False	NA	NA	NA	98644316	98659832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
tx.2169	chr11	+	1190	3	ISM	ENSMUSG00000058756.14	ENSMUST00000124072.2	1240	9	9873	-603	9873	0	3prime_fragment	FALSE	canonical	3	17	junction_2	16.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGCCTCCTCCAGG	7521	False	NA	NA	False	NA	NA	NA	98654284	98659832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_98654614_98655103_98655232_98659099
tx.217	chr1	+	1034	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	273	0	273	0	multi-exon	FALSE	canonical	3	3391	junction_2	148.912353043288	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTACTTGAGTC	27	False	NA	NA	False	NA	NA	NA	72863934	72891633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
tx.2170	chr11	+	1303	3	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	21652	0	9877	0	3prime_fragment	FALSE	canonical	3	46	junction_2	2	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGCCTCCTCCAGG	7525	False	NA	NA	False	NA	NA	NA	98654288	98659832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_98654614_98655103_98655232_98658982
tx.2171	chr11	-	2670	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	51	0	51	0	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTCTGTGATGTGTG	NA	False	NA	NA	False	NA	NA	NA	98666108	98658757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
tx.2172	chr11	+	2557	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	13	2044	13	-1	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	30	False	NA	NA	False	NA	NA	NA	98798639	98812718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
tx.2173	chr11	+	2444	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	14	780	14	0	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	7452	False	NA	NA	False	NA	NA	NA	98851251	98864988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
tx.2174	chr11	-	1716	11	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	23150	4	221	-4	3prime_fragment	FALSE	canonical	3	1094	junction_4	253.173873059603	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	98891865	98883772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799
tx.2175	chr11	-	1710	11	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	221	-7	combination_of_known_junctions	FALSE	canonical	3	633	junction_4	362.463736117146	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	NA	False	NA	NA	NA	98891865	98883775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799
tx.2176	chr11	-	1278	2	FSM	ENSMUSG00000037935.17	ENSMUST00000156160.2	610	2	277	-945	277	0	multi-exon	FALSE	canonical	3	763	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	False	NA	NA	False	NA	NA	NA	99103992	99099872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_99101104_99103945
tx.2177	chr11	-	2257	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	198.840962568234	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	False	NA	NA	False	NA	NA	NA	99121286	99099872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119100_99119145_99119322_99119375_99121227
tx.2178	chr11	-	1783	5	ISM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	11732	0	1546	0	3prime_fragment	FALSE	canonical	3	598	junction_2	67.3442647892157	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	False	NA	NA	False	NA	NA	NA	99110111	99099872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045
tx.2179	chr11	-	1418	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	551	950	-20	-5	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTATGTGGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	99121292	99100822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
tx.218	chr1	+	781	3	FSM	ENSMUSG00000039323.19	ENSMUST00000155703.2	906	3	451	-326	451	0	multi-exon	FALSE	canonical	3	3391	junction_1	173	358	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTACTTGAGTC	NA	False	NA	NA	False	NA	NA	NA	72888308	72891633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_72888472_72888722_72888864_72891156
tx.2180	chr11	-	547	2	ISM	ENSMUSG00000019761.11	ENSMUST00000103131.5	2094	8	3270	0	3	0	3prime_fragment	FALSE	canonical	3	82	junction_1	0	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCAGAATTATTATTTA	8342	False	NA	NA	False	NA	NA	NA	99276920	99276079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_99276463_99276756
tx.2181	chr11	-	1428	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	148	0	148	0	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATACCTTGCTTATTTCAG	9747	False	NA	NA	False	NA	NA	NA	100036798	100031635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
tx.2182	chr11	-	1573	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	-30	8	-30	-8	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACAATAGGTGGACTGG	NA	False	NA	NA	False	NA	NA	NA	100151885	100147050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
tx.2183	chr11	-	728	5	ISM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	2495	51	2495	-51	3prime_fragment	FALSE	canonical	3	34	junction_4	2.1650635094611	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAACTGTGGCCTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	100149360	100147093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234
tx.2184	chr11	-	1024	5	FSM	ENSMUSG00000053654.8	ENSMUST00000107406.2	1062	5	33	5	33	0	multi-exon	FALSE	canonical	3	72	junction_1	11.3688170009021	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	NA	False	NA	NA	NA	100156771	100153712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425
tx.2185	chr11	-	1654	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	-112	0	-112	0	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	NA	False	NA	NA	NA	100160809	100153712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
tx.2186	chr11	+	1217	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	101	4	101	-4	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	5445	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGATGTCCAGATT	4058	False	NA	NA	False	NA	NA	NA	100210811	100212918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
tx.2187	chr11	-	3650	11	FSM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	0	-1530	0	-2	multi-exon	FALSE	canonical	3	486	junction_1	44.9070150421958	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGTCTCAGTTGTG	2048	False	NA	NA	False	NA	NA	NA	100246913	100238154	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
tx.2188	chr11	-	1730	6	ISM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	20607	0	-3017	0	3prime_fragment	FALSE	canonical	3	472	junction_4	54.0014814611599	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	6771	False	NA	NA	False	NA	NA	NA	100267968	100261444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548
tx.2189	chr11	-	3243	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	-38	0	-24	0	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	NA	False	NA	NA	NA	100288613	100261444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
tx.219	chr1	+	1419	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	20	0	0	0	multi-exon	TRUE	canonical	3	1389	junction_1	306.215936881149	801	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7848	False	NA	NA	False	NA	NA	NA	74275675	74307368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
tx.2190	chr11	+	1064	2	ISM	ENSMUSG00000001555.11	ENSMUST00000125616.2	767	3	443	-532	443	8	3prime_fragment	FALSE	canonical	3	28	junction_1	0	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGACAGATGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	100314306	100315658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_100314426_100314713
tx.2191	chr11	-	1378	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	20	1	4	-1	multi-exon	FALSE	canonical	3	274	junction_8	92.107868149252	288	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	NA	False	NA	NA	NA	100331895	100320179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
tx.2192	chr11	+	1312	4	NNC	ENSMUSG00000001558.6	novel	2017	5	NA	NA	-792	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	6.59966329107444	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTACTGGAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	100331950	100347850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_100332042_100337946_100338565_100347109_100347260_100347397
tx.2193	chr11	+	953	3	ISM	ENSMUSG00000001558.6	ENSMUST00000001599.4	2017	5	5468	2	5458	-2	3prime_fragment	FALSE	canonical	3	30	junction_1	0	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGTAAGAGTACTGGAAAA	3800	False	NA	NA	False	NA	NA	NA	100338210	100347846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_100338565_100347109_100347260_100347397
tx.2194	chr11	-	2407	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	-11	-3	-11	3	multi-exon	FALSE	canonical	3	21	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTAGTTACTTGGCCTTT	7683	False	NA	NA	False	NA	NA	NA	100363578	100353436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100355272_100363006
tx.2195	chr11	-	4265	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	131	-3	0	0	multi-exon	FALSE	canonical	3	2198	junction_15	363.337822300204	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	NA	False	NA	NA	NA	100418695	100367178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
tx.2196	chr11	-	4293	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	130	3	-1	0	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	100418696	100367181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
tx.2197	chr11	+	1964	11	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	4170	0	230	0	3prime_fragment	FALSE	canonical	3	16	junction_2	6.19354502688081	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGACACTGTGC	NA	False	NA	NA	False	NA	NA	NA	100440602	100462789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
tx.2198	chr11	+	1268	7	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	8040	2	4100	-2	3prime_fragment	FALSE	canonical	3	25	junction_1	3.53160335006952	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTTGAGTGACACTGT	2522	False	NA	NA	False	NA	NA	NA	100444472	100462787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
tx.2199	chr11	+	2315	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	42	0	42	0	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	NA	False	NA	NA	NA	100465771	100472554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
tx.22	chr1	+	3074	7	FSM	ENSMUSG00000056763.17	ENSMUST00000119714.8	1268	7	-20	-1786	-2	555	multi-exon	FALSE	canonical	2	91	junction_2	18.4157239577729	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGCTAGTGTTTATTA	NA	False	NA	NA	False	NA	NA	NA	10109989	10139113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
tx.220	chr1	+	1609	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	17	-222	-16	0	multi-exon	FALSE	canonical	3	1867	junction_3	197.32307280632	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7865	False	NA	NA	False	NA	NA	NA	74275692	74307368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
tx.2200	chr11	-	1791	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	539	0	-2	0	multi-exon	FALSE	canonical	3	2240	junction_1	249.671049855795	1406	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5921	False	NA	NA	False	NA	NA	NA	100510455	100473643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
tx.2201	chr11	+	2070	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	27	0	-17	0	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	155	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCCGTCCCCTACCCCT	NA	False	NA	NA	False	NA	NA	NA	100513728	100518433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
tx.2202	chr11	-	1577	7	ISM	ENSMUSG00000017830.16	ENSMUST00000017974.13	2412	13	2789	-5	1865	5	3prime_fragment	FALSE	canonical	0	0	junction_3	1.49071198499986	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTTTATTTTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	100592308	100585704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_100586169_100586940_100587038_100587801_100587993_100588981_100589144_100589234_100589385_100590031_100590286_100592049
tx.2203	chr11	-	3036	18	FSM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	7	0	7	0	multi-exon	FALSE	canonical	3	387	junction_12	55.3609733498447	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6786	False	NA	NA	False	NA	NA	NA	100603284	100595571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
tx.2204	chr11	-	1558	9	ISM	ENSMUSG00000020918.15	ENSMUST00000153526.8	2946	18	3435	3	3435	-3	3prime_fragment	FALSE	canonical	3	465	junction_8	38.6908823238757	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGATTGTTTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	100599564	100595574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372
tx.2205	chr11	-	1459	5	ISM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	18108	257	10108	-255	3prime_fragment	FALSE	canonical	3	116	junction_2	16.3152535990097	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTTCCTCGTCCTT	9254	False	NA	NA	False	NA	NA	NA	100610933	100606091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740
tx.2206	chr11	-	1643	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	15	257	15	-255	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTTCCTCGTCCTT	NA	False	NA	NA	False	NA	NA	NA	100629026	100606091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
tx.2207	chr11	-	2468	9	FSM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	0	-6	0	6	multi-exon	FALSE	canonical	3	37	junction_7	5.82961190818051	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTATTTTATGTTATC	NA	False	NA	NA	False	NA	NA	NA	100661783	100656851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100661704
tx.2208	chr11	-	4365	24	FSM	ENSMUSG00000004040.17	ENSMUST00000103114.8	6042	24	-43	1720	32	-8	multi-exon	FALSE	canonical	3	67	junction_2	102.13864331127	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTCTGGCAGTGGGGG	NA	False	NA	NA	False	NA	NA	NA	100830273	100777643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100779587_100780303_100780367_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
tx.2209	chr11	-	3025	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	98	1393	37	19	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACTGACACAGCATAGCC	NA	False	NA	NA	False	NA	NA	NA	100830268	100779028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
tx.221	chr1	+	1368	2	Genic_Genomic	ENSMUSG00000064272.4	novel	1075	1	NA	NA	-1468	85	multi-exon	FALSE	canonical	1	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGATTATTCCTTCCAT	NA	False	NA	NA	False	NA	NA	NA	74316240	74318868	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr1_+_74316457_74317716
tx.2210	chr11	+	919	7	ISM	ENSMUSG00000019302.17	ENSMUST00000154896.8	4162	16	0	17321	0	2	5prime_fragment	FALSE	canonical	3	165	junction_5	19.5256241897666	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAAGCTTACTCCCCTC	NA	False	NA	NA	False	NA	NA	NA	100900277	100918328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092
tx.2211	chr11	+	4003	21	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_18	25.9536124653197	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	100900264	100954545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
tx.2212	chr11	+	1080	4	ISM	ENSMUSG00000019301.6	ENSMUST00000019445.6	1339	6	481	0	481	0	3prime_fragment	FALSE	canonical	2	5	junction_1	8.04155872120988	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGGAGGGGGACACAT	NA	False	NA	NA	False	NA	NA	NA	100969717	100971353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_100969935_100970014_100970109_100970485_100970661_100970759
tx.2213	chr11	+	2088	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	50	0	-3	0	multi-exon	FALSE	canonical	3	106	junction_1	26.2908705931015	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3561	False	NA	NA	False	NA	NA	NA	100973440	100977445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
tx.2214	chr11	+	1380	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	48.4418143239908	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3561	False	NA	NA	False	NA	NA	NA	100973440	100977445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_100973517_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
tx.2215	chr11	+	2360	9	FSM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	26	0	26	0	multi-exon	FALSE	canonical	3	125	junction_1	20.9388992069784	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3597	False	NA	NA	False	NA	NA	NA	100973476	100977445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
tx.2216	chr11	+	1820	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8229	False	NA	NA	False	NA	NA	NA	100978108	100983033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
tx.2217	chr11	+	1961	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	3	1	-1	-1	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	8249	False	NA	NA	False	NA	NA	NA	100978128	100983032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
tx.2218	chr11	-	942	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	25	324	-11	10	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	210	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGATGATCAAACCTCCC	NA	False	NA	NA	False	NA	NA	NA	100986237	100982972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
tx.2219	chr11	-	3111	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	52	2	2	-2	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGTTTCGTTGTGTA	9847	False	NA	NA	False	NA	NA	NA	101010667	100987340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
tx.222	chr1	-	1780	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	33	4	-25	2	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	NA	False	NA	NA	NA	74323864	74319002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
tx.2220	chr11	+	1621	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	181	0	181	0	multi-exon	TRUE	canonical	3	373	junction_8	104.461715475096	411	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	1411	False	NA	NA	False	NA	NA	NA	101010944	101017245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
tx.2221	chr11	-	2038	16	NNC	ENSMUSG00000006920.15	novel	3636	15	NA	NA	-2	489	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	39.6329828972452	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGGTTGAGTGTGGTA	2640	False	NA	NA	False	NA	NA	NA	101117254	101088974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_101089249_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
tx.2222	chr11	+	1083	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	21	2	-1	2	multi-exon	FALSE	canonical	3	1136	junction_3	45.4682306671372	983	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCCTGTTACTACTGC	NA	False	NA	NA	False	NA	NA	NA	101144553	101150373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
tx.2223	chr11	-	728	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	163	-5	-8	5	multi-exon	FALSE	canonical	3	1870	junction_1	0	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTGTGTGGGGGCAGAG	5665	False	NA	NA	False	NA	NA	NA	101169777	101168788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_101169279_101169539
tx.2224	chr11	+	2343	7	FSM	ENSMUSG00000078653.5	ENSMUST00000103107.5	2335	7	8	-16	8	16	multi-exon	FALSE	canonical	2	14	junction_6	3.09120616516523	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGTTTAATATTACCC	NA	False	NA	NA	False	NA	NA	NA	101169929	101179543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101170307_101174217_101174294_101174546_101174719_101175585_101175749_101176490_101176636_101177679_101177777_101178230
tx.2225	chr11	-	1897	5	ISM	ENSMUSG00000035086.14	ENSMUST00000139997.9	3476	10	7429	0	613	0	3prime_fragment	FALSE	canonical	3	456	junction_3	41.6795813318704	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	NA	False	NA	NA	NA	101185649	101179087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826
tx.2226	chr11	-	2029	12	FSM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	26	2310	0	0	multi-exon	FALSE	canonical	3	365	junction_8	49.9747043451001	316	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	NA	False	NA	NA	NA	101193086	101179087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
tx.2227	chr11	+	2718	12	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	11	-10	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	514.270726529606	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGCAGACCCTGGTG	NA	False	NA	NA	False	NA	NA	NA	101207049	101214353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_101207315_101207846_101207922_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
tx.2228	chr11	+	2643	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	15	6	15	-6	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGACCCTGGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	101207053	101214357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
tx.2229	chr11	+	2543	10	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_3	427.085471539363	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	NA	False	NA	NA	NA	101207054	101214363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
tx.223	chr1	+	618	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	122	0	2	0	multi-exon	FALSE	canonical	3	1381	junction_1	89	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCAGGTTGAATTTGT	NA	False	NA	NA	False	NA	NA	NA	74324210	74326613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_74324297_74325000_74325170_74326250
tx.2230	chr11	-	537	4	ISM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	7477	-176	4441	176	3prime_fragment	FALSE	canonical	3	563	junction_3	66.6149799636355	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTATAGTTGCTTA	1296	False	NA	NA	False	NA	NA	NA	101300964	101297488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939
tx.2231	chr11	-	1321	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	195	0	-14	0	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	402	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	NA	False	NA	NA	NA	101308246	101297664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
tx.2232	chr11	+	3216	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	0	7	0	-7	multi-exon	FALSE	canonical	3	47	junction_3	4.27200187265877	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATAGCTCCTCTGCACT	NA	False	NA	NA	False	NA	NA	NA	101315910	101326492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
tx.2233	chr11	+	516	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	98	0	-42	0	multi-exon	FALSE	canonical	3	8302	junction_4	1985.8892844265	6217	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2339	False	NA	NA	False	NA	NA	NA	101333221	101336355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
tx.2234	chr11	+	1134	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	-6	234	-6	0	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGTGATGGTCTTCTT	975	False	NA	NA	False	NA	NA	NA	101339226	101349290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
tx.2235	chr11	-	2773	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	0	-7	0	7	multi-exon	TRUE	canonical	3	320	junction_5	13.7462722219517	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATGTTGTATCTGAGAG	NA	False	NA	NA	False	NA	NA	NA	101357056	101349563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
tx.2236	chr11	+	1275	5	NIC	ENSMUSG00000001313.13	novel	1578	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	68.3245929369506	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	7809	False	NA	NA	False	NA	NA	NA	101355824	101362679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_101355971_101359758_101359847_101360838_101360949_101361543_101361679_101361883
tx.2237	chr11	+	1486	5	FSM	ENSMUSG00000001313.13	ENSMUST00000134980.2	831	5	93	-748	93	0	multi-exon	FALSE	canonical	3	18	junction_1	62.3097103186975	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	8387	False	NA	NA	False	NA	NA	NA	101356402	101362679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
tx.2238	chr11	+	1324	5	FSM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	70	0	70	0	multi-exon	FALSE	canonical	3	109	junction_1	23.8051990119806	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	101359070	101362679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883
tx.2239	chr11	+	1429	9	FSM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	0	875	0	147	multi-exon	FALSE	canonical	3	13	junction_1	4.99843725578305	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGCTTTGATCATGTG	3688	False	NA	NA	False	NA	NA	NA	101473067	101481739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101473152_101473450_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
tx.224	chr1	-	2148	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	228	2	38	-2	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTGAGTTGCTGTGGC	NA	False	NA	NA	False	NA	NA	NA	74343336	74327407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
tx.2240	chr11	+	1102	7	FSM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	9	13	9	-13	multi-exon	FALSE	canonical	3	866	junction_2	120.614284210269	1094	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGTAAATAGTGTG	NA	False	NA	NA	False	NA	NA	NA	101518776	101526913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
tx.2241	chr11	+	1310	6	NIC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	9	-13	intron_retention	FALSE	canonical	3	866	junction_1	132.095420056866	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGTAAATAGTGTG	NA	False	NA	NA	False	NA	NA	NA	101518776	101526913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
tx.2242	chr11	+	1393	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	-11	0	-11	0	multi-exon	FALSE	canonical	3	45	junction_1	0	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGATCTGGTAACT	2539	False	NA	NA	False	NA	NA	NA	101556355	101558658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_101556464_101557373
tx.2243	chr11	-	2129	11	ISM	ENSMUSG00000017724.15	ENSMUST00000107176.8	2377	13	928	-7	48	2	3prime_fragment	FALSE	canonical	2	11	junction_8	4.33589667773576	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTTTGCTTCCATGA	211	False	NA	NA	False	NA	NA	NA	101675269	101660565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665054_101666143_101666271_101667918_101667973_101674792_101674841_101675055
tx.2244	chr11	-	1343	6	ISM	ENSMUSG00000017724.15	ENSMUST00000164750.8	2336	13	11620	7	-1509	-2	3prime_fragment	FALSE	canonical	3	16	junction_2	2.71293199325011	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTATTTGCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	101664516	101660574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434
tx.2245	chr11	-	1589	4	NIC	ENSMUSG00000020921.7	novel	1574	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	131.230924539742	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4514	False	NA	NA	False	NA	NA	NA	102047181	102043371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_102044421_102045382_102045530_102046549_102046731_102046969
tx.2246	chr11	-	1572	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	2	0	2	0	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	206	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4467	False	NA	NA	False	NA	NA	NA	102047228	102043371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
tx.2247	chr11	-	2220	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	36	0	1	0	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	253	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6392	False	NA	NA	False	NA	NA	NA	102076086	102053322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
tx.2248	chr11	+	1514	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	59	0	-27	0	multi-exon	TRUE	canonical	3	149	junction_4	4.31740662898458	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	False	NA	NA	False	NA	NA	NA	102080553	102084907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
tx.2249	chr11	-	1688	15	ISM	ENSMUSG00000008855.18	ENSMUST00000124077.8	3872	28	27972	-2	-1351	0	3prime_fragment	FALSE	canonical	1	78	junction_13	45.4461443998974	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	8326	False	NA	NA	False	NA	NA	NA	102092993	102086572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878
tx.225	chr1	+	2857	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	2	0	2	0	multi-exon	FALSE	canonical	3	63	junction_1	11.428445869846	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTCTGAGCTCTCAAT	9365	False	NA	NA	False	NA	NA	NA	74371770	74392845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
tx.2250	chr11	+	2727	11	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	-31	-7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	126.309144562062	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCAGCCTCCGTCCCAC	NA	False	NA	NA	False	NA	NA	NA	102139676	102156006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_102139919_102141504_102141556_102145289_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
tx.2251	chr11	+	2565	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	-25	7	-25	-7	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCAGCCTCCGTCCCAC	NA	False	NA	NA	False	NA	NA	NA	102139682	102156006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
tx.2252	chr11	+	2252	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	94	junction_1	18.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	NA	False	NA	NA	NA	102176018	102180063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_102176545_102178133_102178698_102178901
tx.2253	chr11	-	2520	2	ISM	ENSMUSG00000059995.13	ENSMUST00000145484.2	3102	7	1531	0	1531	0	3prime_fragment	FALSE	canonical	3	193	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	2538	False	NA	NA	False	NA	NA	NA	102182739	102180125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_102182630_102182723
tx.2254	chr11	-	1614	8	ISM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	7684	-14	444	14	3prime_fragment	FALSE	canonical	3	728	junction_2	57.4598351290815	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTAGGTATGCATAGAAT	NA	False	NA	NA	False	NA	NA	NA	102199822	102196735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719
tx.2255	chr11	-	879	2	ISM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	9722	67	2482	2	3prime_fragment	FALSE	canonical	3	921	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	102197784	102196816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_102197593_102197681
tx.2256	chr11	-	3255	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	-36	67	-11	2	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9125	False	NA	NA	False	NA	NA	NA	102207542	102196816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
tx.2257	chr11	-	1377	9	ISM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	-56	4267	-31	-1151	5prime_fragment	FALSE	canonical	3	503	junction_3	104.448252737899	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGCAGGGCAGGTGCCAG	9105	False	NA	NA	False	NA	NA	NA	102207562	102201016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
tx.2258	chr11	-	1469	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	59	157	2	3	multi-exon	TRUE	canonical	3	4398	junction_3	174.765959202208	1264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTGTAGTGTCTTG	7747	False	NA	NA	False	NA	NA	NA	102298311	102293967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
tx.2259	chr11	-	1369	11	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	141	junction_1	1393.56754052324	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCTGTGGCTGTAGTGT	7762	False	NA	NA	False	NA	NA	NA	102298296	102293971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_102294362_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
tx.226	chr1	+	1148	5	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	8442	0	45	0	3prime_fragment	FALSE	canonical	3	29	junction_1	7.87400787401181	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	4366	False	NA	NA	False	NA	NA	NA	74422803	74425221	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
tx.2260	chr11	+	2167	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	166	-2	-30	0	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	611	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATCTGATTTGTTGCGC	4304	False	NA	NA	False	NA	NA	NA	102321313	102327635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
tx.2261	chr11	-	2048	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	48	4775	25	-3483	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACACAAAAAATCCAGCA	685	False	NA	NA	False	NA	NA	NA	102446977	102371515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
tx.2262	chr11	-	1577	7	NNC	ENSMUSG00000034621.15	novel	390	6	NA	NA	12	11029	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	58.3628496753048	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTACAGTCTGTGAGTC	672	False	NA	NA	False	NA	NA	NA	102446990	102387290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_102388336_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
tx.2263	chr11	-	2400	2	FSM	ENSMUSG00000034621.15	ENSMUST00000125754.2	893	2	193	-1700	0	810	multi-exon	FALSE	canonical	3	159	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACGGGTCCCAGAAAAC	637	False	NA	NA	False	NA	NA	NA	102447025	102426902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102429183_102446905
tx.2264	chr11	-	530	2	ISM	ENSMUSG00000078640.10	ENSMUST00000107080.2	585	3	243	-96	243	3	3prime_fragment	FALSE	canonical	3	16	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCTTTTTTTTTTTT	8823	False	NA	NA	False	NA	NA	NA	102469702	102467220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_102467624_102469575
tx.2265	chr11	-	1153	4	NNC	ENSMUSG00000078640.10	novel	796	4	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2.35702260395516	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTTGCTTCTTTTTTT	8262	False	NA	NA	False	NA	NA	NA	102470263	102467225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_102467624_102467724_102468057_102469575_102469722_102469986
tx.2266	chr11	-	1946	3	ISM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	7506	0	7260	0	3prime_fragment	FALSE	canonical	0	0	junction_2	259	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	102581102	102575511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_102577323_102579626_102579686_102581026
tx.2267	chr11	-	2315	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	52	-1	4	1	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCTGTCTTGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	102588556	102575510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
tx.2268	chr11	-	987	4	FSM	ENSMUSG00000020925.17	ENSMUST00000153157.8	989	4	4	-2	4	2	multi-exon	FALSE	canonical	0	0	junction_1	267.304237818175	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTTCTTGTTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	102588556	102579142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102579686_102581026_102581163_102582936_102583025_102588336
tx.2269	chr11	-	2323	3	FSM	ENSMUSG00000020925.17	ENSMUST00000138147.2	875	3	-59	-1389	5	-2	multi-exon	FALSE	canonical	3	524	junction_2	39	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTGGCTTCTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	102588555	102579146	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102581163_102582936_102583025_102588336
tx.227	chr1	+	3009	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	257	2	255	-2	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTTTTGTTTTTAA	1117	False	NA	NA	False	NA	NA	NA	74545473	74569999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
tx.2270	chr11	-	2022	3	FSM	ENSMUSG00000034520.15	ENSMUST00000092567.11	1890	3	-25	-107	-25	107	multi-exon	FALSE	canonical	3	30	junction_2	376	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTAAGATCTATCTATAG	NA	False	NA	NA	False	NA	NA	NA	102710551	102690297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102692022_102693666_102693743_102710329
tx.2271	chr11	-	1667	2	FSM	ENSMUSG00000034520.15	ENSMUST00000155089.2	3413	2	2898	-1152	2011	0	multi-exon	FALSE	canonical	3	782	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	4017	False	NA	NA	False	NA	NA	NA	102693716	102690404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102692022_102693666
tx.2272	chr11	-	1801	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	43	-1597	12	0	multi-exon	FALSE	canonical	3	62	junction_2	360	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	NA	False	NA	NA	NA	102709993	102690404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102692022_102693666_102693743_102709885
tx.2273	chr11	-	1903	4	NNC	ENSMUSG00000034520.15	novel	247	3	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	347.835529461203	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCTGTTAAAGGGTAA	NA	False	NA	NA	False	NA	NA	NA	102709998	102690407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_102692022_102693666_102693743_102700471_102700572_102709885
tx.2274	chr11	-	3313	28	FSM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	11	0	8	0	multi-exon	TRUE	canonical	3	142	junction_26	264.162864923118	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8477	False	NA	NA	False	NA	NA	NA	102771782	102729298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
tx.2275	chr11	-	2959	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	1	366	1	-366	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGGACTCTTGGGCTCT	3725	False	NA	NA	False	NA	NA	NA	102815949	102796720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
tx.2276	chr11	-	1719	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	25	0	25	0	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	8218	False	NA	NA	False	NA	NA	NA	102907969	102884872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
tx.2277	chr11	+	1857	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	201	2803	-38	-2803	multi-exon	TRUE	canonical	3	928	junction_6	43.300411312535	435	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCTAAATATCTTTCA	NA	False	NA	NA	False	NA	NA	NA	102919372	102956935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
tx.2278	chr11	-	3033	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	-5	-5	-5	5	multi-exon	FALSE	canonical	2	10	junction_14	6.65168384389875	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCTTTCCACTTTATT	9404	False	NA	NA	False	NA	NA	NA	102992489	102961124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
tx.2279	chr11	+	1637	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	44	junction_1	32.3138902022025	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	NA	False	NA	NA	NA	102993895	103003026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
tx.2280	chr11	+	1176	3	NNC	ENSMUSG00000043372.13	novel	1221	3	NA	NA	6	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.5	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACTGGGGCTCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	103024145	103030037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_103024190_103024860_103024968_103029012
tx.2281	chr11	+	1216	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	25	-20	0	20	multi-exon	FALSE	canonical	3	13	junction_1	7	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACTGGGGCTCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	103024164	103030037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_103024249_103024860_103024968_103029012
tx.2282	chr11	-	348	2	ISM	ENSMUSG00000020940.14	ENSMUST00000021323.11	1199	10	9059	-1	9033	1	3prime_fragment	FALSE	canonical	3	22	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCGCCTAGTGGGAT	NA	False	NA	NA	False	NA	NA	NA	103090315	103089768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_103089945_103090143
tx.2283	chr11	-	3065	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	194	7	-6	-7	multi-exon	TRUE	canonical	3	264	junction_1	54.6867442804927	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAGCACTTGGCATTC	NA	False	NA	NA	False	NA	NA	NA	103588530	103567681	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
tx.2284	chr11	-	2998	5	FSM	ENSMUSG00000020946.14	ENSMUST00000145265.2	917	5	-14	-2067	-14	-17	multi-exon	FALSE	canonical	3	13	junction_4	142.958910180513	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAACTTTAAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	103588538	103567691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103588455
tx.2285	chr11	-	1596	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-10	-542	-6	542	multi-exon	FALSE	canonical	3	79	junction_1	134.545531326759	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGATCTAGTGAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	103588530	103569009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
tx.2286	chr11	-	3782	22	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_21	89.2116899491472	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	NA	NA	NA	103844850	103712607	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103821901_103821950_103844795
tx.2287	chr11	-	3734	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	32	0	0	0	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	NA	NA	NA	103844850	103712607	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
tx.2288	chr11	-	1869	9	FSM	ENSMUSG00000034187.19	ENSMUST00000145126.8	3212	9	0	1343	0	-1343	multi-exon	FALSE	canonical	3	278	junction_2	26.9973957077345	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACACTTGAGCTCAATTT	NA	False	NA	NA	False	NA	NA	NA	103844850	103772686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
tx.2289	chr11	+	2248	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	72	junction_4	7.43303437365925	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCATGTTCTCCTGGA	NA	False	NA	NA	False	NA	NA	NA	103857558	103876163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
tx.2290	chr11	+	1443	9	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-13	14	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	219.953652788491	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	NA	False	NA	NA	False	NA	NA	NA	104122291	104219275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.2291	chr11	+	1012	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8371	24	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	201.516128386787	21	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCCAAAAAATTTCCTT	9485	False	NA	NA	False	NA	NA	NA	104200487	104219285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_104200551_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.2292	chr11	+	1059	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8364	24	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	130	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCCAAAAAATTTCCTT	9492	False	NA	NA	False	NA	NA	NA	104200494	104219285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.2293	chr11	+	1125	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8187	24	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	186.526640188473	62	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCCAAAAAATTTCCTT	9669	False	NA	NA	False	NA	NA	NA	104200671	104219285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_104200848_104201094_104201361_104212176_104212259_104213253_104213367_104218797
tx.2294	chr11	+	966	4	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-7768	37	combination_of_known_splicesites	FALSE	canonical	3	463	junction_1	33.0386978489703	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGGGCAATTGCTAA	NA	False	NA	NA	False	NA	NA	NA	104201090	104219298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_104201361_104212176_104212259_104213253_104213367_104218797
tx.2295	chr11	+	566	4	ISM	ENSMUSG00000061086.13	ENSMUST00000123074.8	677	6	3980	-10	-659	4	3prime_fragment	FALSE	canonical	3	41	junction_3	1.69967317119759	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTTGATTTGTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	104475130	104478045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_104475439_104475762_104475841_104476552_104476598_104477910
tx.2296	chr11	+	2571	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	48	-752	-6	752	multi-exon	TRUE	canonical	3	226	junction_6	21.0698243941424	121	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGGTGGTGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	105017298	105031972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
tx.2297	chr4	+	170	1	FSM	ENSMUSG00000094417.2	ENSMUST00000117481.2	565	1	-95	490	-95	-490	mono-exon	FALSE	NA	NA	NA	NA	NA	8	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGGGACCACTCAACAG	NA	False	NA	NA	False	NA	NA	NA	145501193	145501363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_145501200_145501400
tx.2298	chr11	+	2041	10	ISM	ENSMUSG00000020694.18	ENSMUST00000126175.8	3086	20	71302	-1	509	0	3prime_fragment	FALSE	canonical	3	279	junction_7	25.3727763119801	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	NA	False	NA	NA	NA	105144126	105173003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
tx.2299	chr11	+	1984	9	ISM	ENSMUSG00000020694.18	ENSMUST00000126175.8	3086	20	72967	-1	2174	0	3prime_fragment	FALSE	canonical	3	279	junction_6	25.0836101867335	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	NA	False	NA	NA	NA	105145791	105173003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
tx.23	chr1	+	422	2	NNC	ENSMUSG00000048960.14	novel	11053	40	NA	NA	11251	-41	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATAACTGATGTTTGG	NA	False	NA	NA	False	NA	NA	NA	11365467	11368081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_11365740_11367931
tx.2300	chr11	-	2765	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	105834983	105824527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
tx.2301	chr11	-	2496	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	244	1	-29	-1	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	105834994	105824528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
tx.2302	chr11	+	1524	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	28	4198	0	-4198	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTCAGCTGTTGTGT	4773	False	NA	NA	False	NA	NA	NA	105927725	105945952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
tx.2303	chr11	+	850	4	ISM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	11311	4199	11283	-4199	3prime_fragment	FALSE	canonical	3	184	junction_3	11.7284080571728	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTCAGCTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	105939008	105945951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_105939088_105942582_105942793_105944556_105944675_105945508
tx.2304	chr11	+	1367	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	0	16	0	-16	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTTGCTGGTATGAC	874	False	NA	NA	False	NA	NA	NA	105956886	105964422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
tx.2305	chr11	-	2985	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	-351	-7	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	112.144995430024	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCAGCATGTCC	NA	False	NA	NA	False	NA	NA	NA	106051319	106047088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106051185
tx.2306	chr11	-	1464	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	28	1458	28	600	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTTCGGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	106050940	106048539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
tx.2307	chr11	-	866	2	ISM	ENSMUSG00000040699.14	ENSMUST00000138094.2	908	3	403	-274	403	274	3prime_fragment	FALSE	canonical	3	236	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCTCTTGTGTGGCC	NA	False	NA	NA	False	NA	NA	NA	106049832	106048865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_106049660_106049760
tx.2308	chr11	-	1333	5	ISM	ENSMUSG00000069631.15	ENSMUST00000007444.14	2099	13	25161	-35	25161	14	3prime_fragment	FALSE	canonical	3	129	junction_4	7.04893608993584	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCCTTGTGTTCA	6737	False	NA	NA	False	NA	NA	NA	106059201	106054141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134
tx.2309	chr11	-	2059	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	-10	-532	0	14	multi-exon	TRUE	canonical	3	87	junction_9	16.6340013225922	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCCTTGTGTTCA	NA	False	NA	NA	False	NA	NA	NA	106084398	106054141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
tx.2310	chr11	-	1952	10	NIC	ENSMUSG00000069631.15	novel	1517	11	NA	NA	-25	6	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	39.0520387226462	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCACCAGTGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	106084423	106054149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
tx.2311	chr11	-	2065	11	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	3	9	combination_of_known_splicesites	FALSE	canonical	3	51	junction_9	25.5305699113827	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCACCAGTGTTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	106084385	106054146	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
tx.2312	chr11	-	3167	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-482	1425	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	175.732336713158	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	NA	False	NA	NA	NA	106107652	106090179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
tx.2313	chr11	-	3238	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	9	1946	9	1425	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	265	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	NA	False	NA	NA	NA	106107161	106090179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
tx.2314	chr11	+	4003	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	9	-1	9	1	multi-exon	FALSE	canonical	2	294	junction_3	62.7187383355908	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	106107760	106139966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
tx.2315	chr11	+	2741	9	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	20069	-1	-1	1	3prime_fragment	FALSE	canonical	3	440	junction_2	33.1339610520686	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	106127820	106139966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
tx.2316	chr11	-	2898	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	247	-1	-28	1	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	273	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTCTGATAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	106146658	106139966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
tx.2317	chr11	+	1318	11	FSM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	0	-2	0	2	multi-exon	FALSE	canonical	3	2261	junction_6	178.766439803449	2678	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAACTCCAGTTTGTTAA	4536	False	NA	NA	False	NA	NA	NA	106146979	106153948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
tx.2318	chr11	-	1451	6	ISM	ENSMUSG00000078619.11	ENSMUST00000106843.8	2548	12	2565	1	-298	-1	3prime_fragment	FALSE	canonical	3	510	junction_5	34.6028900527109	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCAGACCTGGTCATTG	5514	False	NA	NA	False	NA	NA	NA	106156060	106154005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008
tx.2319	chr11	-	1274	6	FSM	ENSMUSG00000040592.12	ENSMUST00000167143.2	1195	6	-76	-3	-76	0	multi-exon	FALSE	canonical	3	38	junction_4	7.4027022093287	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCGTGATATCATCTC	5013	False	NA	NA	False	NA	NA	NA	106205431	106202166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_106202732_106202832_106202875_106203147_106203267_106203458_106203768_106204486_106204538_106205243
tx.2320	chr11	-	1104	5	ISM	ENSMUSG00000040592.12	ENSMUST00000167143.2	1195	6	798	-1	798	1	3prime_fragment	FALSE	canonical	3	38	junction_4	7.56637297521078	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTTCGTGATATCATC	5887	False	NA	NA	False	NA	NA	NA	106204557	106202168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_106202732_106202832_106202875_106203147_106203267_106203458_106203768_106204486
tx.2321	chr11	+	105	2	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	320	junction_1	0	616	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCTGGTGTCTTGTGTGT	4511	False	NA	NA	False	NA	NA	NA	106391740	106392037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_+_106391767_106391958
tx.2322	chr11	-	3242	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9036	2	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_14	378.799506766483	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCATTCAAGTGTCAT	388	False	NA	NA	False	NA	NA	NA	106615256	106545040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
tx.2323	chr11	-	1996	11	ISM	ENSMUSG00000020717.20	ENSMUST00000183610.8	3006	15	24248	-1	333	0	3prime_fragment	FALSE	canonical	3	410	junction_2	388.559712270843	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	7035	False	NA	NA	False	NA	NA	NA	106581840	106545042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761
tx.2324	chr11	-	2618	11	ISM	ENSMUSG00000020717.20	ENSMUST00000103069.10	3233	14	17958	0	-5960	0	3prime_fragment	FALSE	canonical	3	518	junction_1	301.611936103331	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	742	False	NA	NA	False	NA	NA	NA	106588133	106545042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877
tx.2325	chr11	-	1394	8	NIC	ENSMUSG00000020718.13	novel	1770	8	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	16.8001457719623	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTGGACTTTTGTATT	4308	False	NA	NA	False	NA	NA	NA	106670352	106659076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669909
tx.2326	chr11	-	1527	8	FSM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	-21	0	1	0	multi-exon	FALSE	canonical	3	24	junction_7	14.9652659072089	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGGACTTTTGTA	4298	False	NA	NA	False	NA	NA	NA	106670362	106659078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669784
tx.2327	chr11	-	3693	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	1103.10076146326	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9243	False	NA	NA	False	NA	NA	NA	106679731	106671180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
tx.2328	chr11	-	2469	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATTGTACTTTATTTT	8963	False	NA	NA	False	NA	NA	NA	106680011	106672367	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
tx.2329	chr11	-	2330	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	38	1191	0	2	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	731	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9654	False	NA	NA	False	NA	NA	NA	106679320	106672371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
tx.2330	chr11	+	1414	10	ISM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	21981	-8	-1070	0	3prime_fragment	FALSE	canonical	3	29	junction_3	12.0554275466834	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTTGAATTTATAACC	NA	False	NA	NA	False	NA	NA	NA	106702081	106709687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
tx.2331	chr11	+	1108	8	ISM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	24558	-8	-390	0	3prime_fragment	FALSE	canonical	3	29	junction_1	13.2818734847651	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTTGAATTTATAACC	NA	False	NA	NA	False	NA	NA	NA	106704658	106709687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
tx.2332	chr11	-	2001	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	53	0	-38	0	multi-exon	FALSE	canonical	3	2002	junction_5	417.039386629129	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9719	False	NA	NA	False	NA	NA	NA	106890314	106879454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
tx.2333	chr11	+	1190	3	ISM	ENSMUSG00000078607.7	ENSMUST00000140447.4	1677	5	2449	-5	-93	0	3prime_fragment	FALSE	canonical	1	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGGCTTTGCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	106918955	106921269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_106919095_106919191_106919384_106920410
tx.2334	chr11	-	2104	10	ISM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	10292	-3	5732	3	3prime_fragment	FALSE	canonical	3	375	junction_7	55.2364166867752	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAATGTCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	107069915	107057485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794
tx.2335	chr11	-	3016	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	88	-6	59	6	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGTCTCTCTTTTTA	1189	False	NA	NA	False	NA	NA	NA	107080119	107057482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
tx.2336	chr11	-	3093	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	71	-6	42	6	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGTCTCTCTTTTTA	1172	False	NA	NA	False	NA	NA	NA	107080136	107057482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
tx.2337	chr11	-	660	4	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	95	17907	66	1970	5prime_fragment	FALSE	canonical	3	456	junction_3	16.779617264871	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCTAATTAAATCCCACT	1196	False	NA	NA	False	NA	NA	NA	107080112	107075395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_107075715_107077460_107077518_107077634_107077749_107079942
tx.2338	chr11	-	2827	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-47	-3541	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTTCCCCTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	107361572	107102258	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
tx.2339	chr11	+	1750	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	21	133	21	-133	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	1636	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCAGGGTGGTGATTAA	NA	False	NA	NA	False	NA	NA	NA	107370330	107388866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
tx.2340	chr11	+	848	6	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	73	388407	-1	-585	5prime_fragment	FALSE	canonical	3	43	junction_4	6.34350061086148	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGCTCTGAAAGAACTT	NA	False	NA	NA	False	NA	NA	NA	108316090	108363034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842
tx.2341	chr11	+	3374	27	FSM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	79	0	5	0	multi-exon	TRUE	canonical	3	13	junction_14	12.2793543958426	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTTCTTTTTACATT	NA	False	NA	NA	False	NA	NA	NA	108316096	108751441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
tx.2342	chr11	-	932	2	Antisense	novelGene_ENSMUSG00000099630.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAGAGAGACAGAAA	4541	False	NA	NA	False	NA	NA	NA	109242427	109230978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_-_109231808_109242324
tx.2343	chr11	+	2938	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	70	3152	70	-3152	multi-exon	TRUE	canonical	3	267	junction_2	46.1976430375211	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCATTTAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	109253726	109289043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
tx.2344	chr11	+	1023	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	110	-219	110	219	multi-exon	FALSE	canonical	3	100	junction_2	132.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAGGTTTATTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	109253766	109271520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_109254083_109256361_109256589_109271040
tx.2345	chr11	+	1627	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	30	1159	0	0	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGGCCCTAGGAAT	NA	False	NA	NA	False	NA	NA	NA	109316801	109327815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
tx.2346	chr11	+	1885	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-53	0	-47	0	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGGCCCTAGGAAT	NA	False	NA	NA	False	NA	NA	NA	109316998	109327815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
tx.2347	chr11	-	2217	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	138	-1	43	1	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAAAACAAAAAAAACC	3012	False	NA	NA	False	NA	NA	NA	109363982	109343550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
tx.2348	chr11	-	2144	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1383	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	67	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAAAACAAAAAAAACC	1187	False	NA	NA	False	NA	NA	NA	109365807	109343550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
tx.2349	chr11	-	2040	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	10	0	10	0	multi-exon	FALSE	canonical	1	33	junction_5	23.2491039253846	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	NA	False	NA	NA	NA	109502248	109464156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
tx.2350	chr11	+	1483	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	15	1861	15	819	multi-exon	TRUE	canonical	3	1417	junction_9	119.858458191318	482	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTCACCGCTTCTC	NA	False	NA	NA	False	NA	NA	NA	109541761	109558621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
tx.2351	chr11	+	1048	9	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	9192	1861	-5831	819	3prime_fragment	FALSE	canonical	3	1417	junction_7	94.0212741883453	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTCACCGCTTCTC	7223	False	NA	NA	False	NA	NA	NA	109550938	109558621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
tx.2352	chr11	+	2068	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGCATAGTATTAGTG	NA	False	NA	NA	False	NA	NA	NA	110289947	110404467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
tx.2353	chr11	+	1588	9	ISM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	91700	0	11783	0	3prime_fragment	FALSE	canonical	3	81	junction_4	9.25253343684853	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGCATAGTATTAGTG	NA	False	NA	NA	False	NA	NA	NA	110381647	110404467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
tx.2354	chr11	-	1860	2	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-38	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTTCTAAAGTGATAGT	NA	False	NA	NA	False	NA	NA	NA	113092702	112934712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_112935987_113092116
tx.2355	chr11	-	1853	3	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGTAAATGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	113092666	112934728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_112935987_112958167_112958213_113092116
tx.2356	chr11	-	2757	10	NIC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	20	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	188.939601035638	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCCGTGCGATCTT	7789	False	NA	NA	False	NA	NA	NA	113456562	113135676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456411
tx.2357	chr11	-	2706	10	FSM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	-19	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_5	154.822558728882	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7747	False	NA	NA	False	NA	NA	NA	113456604	113135679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
tx.2358	chr11	-	2703	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	167.525785743237	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7747	False	NA	NA	False	NA	NA	NA	113456604	113135679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
tx.2359	chr11	-	2666	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_9	132.005985648052	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCCGTGCGATCTT	7766	False	NA	NA	False	NA	NA	NA	113456585	113135676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
tx.2360	chr11	-	2701	10	FSM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	-38	1	-15	-1	multi-exon	FALSE	canonical	3	154	junction_5	113.78341999899	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7731	False	NA	NA	False	NA	NA	NA	113456620	113135679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
tx.2361	chr11	-	1232	9	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-2	-2679	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	176.999602753792	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTGGCATAAGGCAGGA	7764	False	NA	NA	False	NA	NA	NA	113456587	113138357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
tx.2362	chr11	+	1834	3	FSM	ENSMUSG00000047904.7	ENSMUST00000106630.2	1537	3	-154	-143	-20	10	multi-exon	FALSE	canonical	0	0	junction_2	4	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTTTGTATTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	113510147	113516864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_113510449_113514992_113516076_113516414
tx.2363	chr11	+	535	5	ISM	ENSMUSG00000018661.18	ENSMUST00000063776.14	1476	8	9237	-2	-13	1	3prime_fragment	FALSE	canonical	3	267	junction_2	20.4511613362176	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	113549390	113553227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
tx.2364	chr11	-	1085	3	NNC	ENSMUSG00000041629.8	novel	2619	3	NA	NA	220	-1588	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	675	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTTTCCATGGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	113574761	113553732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_113554370_113568129_113568230_113574413
tx.2365	chr11	-	892	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	139	1588	139	-1588	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTTTCCATGGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	113574842	113553732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_113554370_113568129_113568230_113574687
tx.2366	chr11	+	2075	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	-13	0	-6	0	multi-exon	TRUE	canonical	3	249	junction_1	30.335622624235	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113575259	113585473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
tx.2367	chr11	+	2174	5	FSM	ENSMUSG00000041623.18	ENSMUST00000042227.15	2196	5	22	0	-6	0	multi-exon	FALSE	canonical	3	41	junction_1	114.630929508575	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113575259	113585473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_113575637_113578599_113580048_113582554_113582660_113583220_113583329_113585337
tx.2368	chr11	+	1368	4	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	3756	0	3117	0	3prime_fragment	FALSE	canonical	3	278	junction_3	23.0988215187606	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113579028	113585473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_113580048_113582554_113582660_113583220_113583329_113585337
tx.2369	chr11	-	1331	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-114	1	combination_of_known_junctions	FALSE	canonical	3	87	junction_7	41.9649999939211	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	113600466	113588996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
tx.2370	chr11	-	1504	8	FSM	ENSMUSG00000018727.20	ENSMUST00000100248.6	1375	8	-128	-1	-128	1	multi-exon	FALSE	canonical	3	47	junction_7	53.4469028903587	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	113600480	113588996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
tx.2371	chr11	-	2951	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	57	0	57	0	multi-exon	FALSE	canonical	3	115	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7420	False	NA	NA	False	NA	NA	NA	113642650	113617677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_113620492_113642513
tx.2372	chr11	+	332	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	39	0	15	0	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	4294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	114559388	114563157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
tx.2373	chr11	+	321	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	43	0	-18	0	multi-exon	FALSE	canonical	3	5140	junction_1	6068.87239835375	3043	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	114559416	114563157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
tx.2374	chr11	+	1839	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-18	3521	-18	0	5prime_fragment	FALSE	canonical	3	20	junction_1	8.2192186706253	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	910	False	NA	NA	False	NA	NA	NA	114742649	114759922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321
tx.2375	chr11	+	1923	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	0	2	0	-2	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCCTCTGTGTCCTCCT	NA	False	NA	NA	False	NA	NA	NA	115054166	115072005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
tx.2376	chr11	-	1153	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	-10	0	-10	0	multi-exon	FALSE	canonical	2	2	junction_5	51.0217818409179	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	NA	False	NA	NA	NA	115078168	115073657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077661_115077944
tx.2377	chr11	-	1167	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103040.11	1204	7	37	0	2	0	multi-exon	FALSE	canonical	2	2	junction_5	40.7553677446297	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	NA	False	NA	NA	NA	115078179	115073657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077944
tx.2378	chr11	+	1108	9	NNC	ENSMUSG00000045980.14	novel	3147	9	NA	NA	-16	22796	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	14.9033343584582	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGTGTATGTAGCTAT	NA	False	NA	NA	False	NA	NA	NA	115078296	115111025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115110749
tx.2379	chr11	-	1862	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	86	0	-50	0	multi-exon	FALSE	canonical	3	83	junction_7	15.1766458254911	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	NA	False	NA	NA	NA	115167790	115158849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
tx.2380	chr11	-	1291	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	-73	3733	-73	-3733	multi-exon	FALSE	canonical	2	4	junction_5	1.6	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATCCACCTAGGCCTC	356	False	NA	NA	False	NA	NA	NA	115188413	115174180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
tx.2381	chr11	+	754	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	-5	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	353.082766501	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	115294577	115301745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
tx.2382	chr11	+	841	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	0	1755	0	0	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	460	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	115294577	115301745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
tx.2383	chr11	+	781	5	FSM	ENSMUSG00000018858.16	ENSMUST00000106539.10	2522	5	-2	1743	0	0	multi-exon	FALSE	canonical	3	79	junction_2	428.298377302553	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	115294577	115301745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115294787_115297376_115297414_115300885_115300969_115301057_115301228_115301463
tx.2384	chr11	-	602	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	21	2	21	-2	multi-exon	FALSE	canonical	3	1974	junction_5	551.930285452792	2154	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	NA	False	NA	NA	NA	115310767	115306516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
tx.2385	chr11	+	2256	3	FSM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	7	-3	7	3	multi-exon	FALSE	canonical	3	16	junction_2	2.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGCTAGTCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	115366499	115381296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115366854_115366947_115367092_115379538
tx.2386	chr11	-	832	5	NNC	ENSMUSG00000020736.13	novel	858	5	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	85.4382086656784	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTTTGGATCTTTGATG	NA	False	NA	NA	False	NA	NA	NA	115382689	115381247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_115381571_115381678_115381794_115381988_115382025_115382096_115382198_115382432
tx.2387	chr11	-	1371	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.422046928452	1599	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	115405211	115388178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_115389126_115392813_115392929_115393857_115394001_115405045
tx.2388	chr11	-	1025	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	26	0	-21	0	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	770	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	NA	False	NA	NA	NA	115427076	115413927	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
tx.2389	chr11	+	2098	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	29	0	at_least_one_novel_splicesite	TRUE	canonical	3	80	junction_16	299.37137842857	34	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	NA	False	NA	NA	NA	115455288	115474732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
tx.2390	chr11	+	2111	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	40	79	40	0	multi-exon	FALSE	canonical	3	862	junction_16	81.0315439264927	390	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	NA	False	NA	NA	NA	115455299	115474732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
tx.2391	chr11	-	3665	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	152	-1	-6	1	multi-exon	TRUE	canonical	3	352	junction_6	42.6075385788712	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTTCAATACAGA	3533	False	NA	NA	False	NA	NA	NA	115494725	115475079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
tx.2392	chr11	-	1774	3	ISM	ENSMUSG00000020740.14	ENSMUST00000123485.8	1221	8	2663	-1449	1635	0	3prime_fragment	FALSE	canonical	3	362	junction_2	3.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	NA	False	NA	NA	False	NA	NA	NA	115477218	115475080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_115476667_115476911_115477023_115477141
tx.2393	chr11	-	2944	17	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-6	-552	combination_of_known_junctions	FALSE	canonical	3	93	junction_13	83.8961178705546	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTGGTCACTCCTT	3533	False	NA	NA	False	NA	NA	NA	115494725	115475741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
tx.2394	chr11	+	1269	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	25	668	25	367	multi-exon	TRUE	canonical	3	642	junction_4	47.0451910401053	476	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCCATTCTGTGAGTCT	NA	False	NA	NA	False	NA	NA	NA	115494775	115498194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
tx.2395	chr11	+	972	4	ISM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	795	672	-147	363	3prime_fragment	FALSE	canonical	3	642	junction_3	46.3489182422009	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTCTTCCATTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	115495545	115498190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_115495739_115495848_115495913_115496795_115496964_115497643
tx.2396	chr11	-	1334	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	38	0	-4	0	multi-exon	FALSE	canonical	3	302	junction_2	38.1030182531515	295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	NA	False	NA	NA	NA	115503757	115498743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
tx.2397	chr11	-	1478	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	20	0	intron_retention	FALSE	canonical	3	324	junction_4	32.8129166640212	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	NA	False	NA	NA	NA	115503775	115498743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503610
tx.2398	chr11	-	1424	6	ISM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	3775	804	-1545	212	3prime_fragment	FALSE	canonical	3	138	junction_5	11.4612390255155	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTGTCACTCCTATA	NA	False	NA	NA	False	NA	NA	NA	115515196	115505807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024
tx.2399	chr11	-	1503	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	0	804	0	212	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTGTCACTCCTATA	NA	False	NA	NA	False	NA	NA	NA	115518971	115505807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
tx.24	chr1	-	1895	3	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	5.5	38	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCTAATTGACTTAT	NA	False	NA	NA	False	NA	NA	NA	11465749	11454812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_11456468_11457012_11457110_11465606
tx.2400	chr11	-	2019	2	ISM	ENSMUSG00000059923.14	ENSMUST00000106499.8	2333	4	52489	0	52489	0	3prime_fragment	FALSE	canonical	3	878	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCTTCATTTCTCC	NA	False	NA	NA	False	NA	NA	NA	115537644	115534870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_115536781_115537535
tx.2401	chr11	-	2501	5	FSM	ENSMUSG00000059923.14	ENSMUST00000106497.8	2683	5	177	5	-50	-5	multi-exon	FALSE	canonical	3	861	junction_3	55.2149209906163	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACTGTGTGTCTTCATT	674	False	NA	NA	False	NA	NA	NA	115590183	115534875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977
tx.2402	chr11	-	2548	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	161	0	140	0	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCTTCATTTCTCC	4631	False	NA	NA	False	NA	NA	NA	115599262	115534870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
tx.2403	chr11	+	2048	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	180	junction_1	22.7063922038174	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5953	False	NA	NA	False	NA	NA	NA	115705570	115713915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
tx.2404	chr11	+	1947	11	FSM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	27	5	5	0	multi-exon	FALSE	canonical	3	156	junction_1	26.8730348118704	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5959	False	NA	NA	False	NA	NA	NA	115705576	115713915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
tx.2405	chr11	+	3533	26	FSM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	-6	24	-6	-22	multi-exon	FALSE	canonical	3	630	junction_7	88.2626444199357	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6794	False	NA	NA	False	NA	NA	NA	115714868	115746582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
tx.2406	chr11	+	809	6	ISM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	-6	10135	-6	169	5prime_fragment	FALSE	canonical	3	674	junction_1	80.564508314766	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCGTCTCAGTCAACCCC	6794	False	NA	NA	False	NA	NA	NA	115714868	115736471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199
tx.2407	chr11	+	3790	27	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-6	-22	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	202.96016457021	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6794	False	NA	NA	False	NA	NA	NA	115714868	115746582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
tx.2408	chr11	+	1218	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	368	2068	13	-878	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	221	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGTGGACTGGCCTCT	412	False	NA	NA	False	NA	NA	NA	115824475	115855483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
tx.2409	chr11	-	1344	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	3	59	3	-59	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	895	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTGCCTCCAGAGGTG	NA	False	NA	NA	False	NA	NA	NA	115903542	115899341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
tx.2410	chr11	-	2019	3	FSM	ENSMUSG00000016559.15	ENSMUST00000139378.2	773	3	-28	-1218	3	-330	multi-exon	FALSE	canonical	3	13934	junction_1	171	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTGTCAAACCTAAATT	NA	False	NA	NA	False	NA	NA	NA	115915327	115913116	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115914362_115914450_115914605_115914707
tx.2411	chr11	-	1660	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	3	330	3	-330	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	4283	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTGTCAAACCTAAATT	NA	False	NA	NA	False	NA	NA	NA	115915327	115913116	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
tx.2412	chr11	-	1796	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	30	0	7	0	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	559	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTGACTCTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	115977791	115969398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
tx.2413	chr11	-	1452	4	FSM	ENSMUSG00000020773.12	ENSMUST00000141531.8	1503	4	51	0	-33	0	multi-exon	FALSE	canonical	3	121	junction_3	17.6131264181639	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998894	115996577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603
tx.2414	chr11	-	1438	4	FSM	ENSMUSG00000020773.12	ENSMUST00000134691.2	782	4	-16	-640	-16	0	multi-exon	FALSE	canonical	3	54	junction_2	44.1437047229462	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998877	115996577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603
tx.2415	chr11	-	1642	6	FSM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	550	0	550	0	multi-exon	FALSE	canonical	3	60	junction_4	39.5777715390849	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	116000513	115996577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603_115998835_115999091_115999188_116000359
tx.2416	chr11	-	1351	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	56	4	-23	0	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	599	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	463	False	NA	NA	False	NA	NA	NA	116029638	116022646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
tx.2417	chr11	-	3721	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	22	0	22	0	multi-exon	TRUE	canonical	2	9	junction_11	29.8427833148373	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	116089605	116062713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
tx.2418	chr11	-	3182	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	34	771	34	-771	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGAAAGATTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	116089837	116063484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
tx.2419	chr11	+	739	3	NIC	ENSMUSG00000020778.13	novel	902	4	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	63.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	9072	False	NA	NA	False	NA	NA	NA	116089685	116106144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_116089810_116095670_116095806_116105664
tx.2420	chr11	+	887	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	15	0	15	0	multi-exon	FALSE	canonical	3	95	junction_3	16.0277537068951	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	9082	False	NA	NA	False	NA	NA	NA	116089695	116106144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
tx.2421	chr11	-	2429	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	97	0	15	0	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	321	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9914	False	NA	NA	False	NA	NA	NA	116164946	116135991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
tx.2422	chr11	-	2093	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	9	1103	2	5	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGGGTGAGTGTGAAGT	8929	False	NA	NA	False	NA	NA	NA	116197551	116179929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
tx.2423	chr11	-	1021	4	FSM	ENSMUSG00000015869.17	ENSMUST00000142480.2	912	4	439	-548	439	-7	multi-exon	FALSE	canonical	3	859	junction_1	35.565276448931	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCAGTCGGCTGCTGAG	NA	False	NA	NA	False	NA	NA	NA	116368126	116361677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027
tx.2424	chr11	-	1802	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	31	8	-3	-8	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGTCGGCTGCTGA	NA	False	NA	NA	False	NA	NA	NA	116381143	116361678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
tx.2425	chr11	-	3640	19	FSM	ENSMUSG00000020806.16	ENSMUST00000103029.10	3593	19	-47	0	0	0	multi-exon	FALSE	canonical	2	65	junction_12	15.7409586041568	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	NA	False	NA	NA	NA	116515073	116488990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
tx.2426	chr11	+	856	6	FSM	ENSMUSG00000020812.19	ENSMUST00000139934.8	865	6	9	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	27.7632851082144	200	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	116562494	116566624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
tx.2427	chr11	-	1474	9	FSM	ENSMUSG00000057286.7	ENSMUST00000079545.6	3643	9	219	1950	-40	-1364	multi-exon	TRUE	canonical	3	12	junction_5	7.34421541078419	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAGGCGGGCAGGCACA	NA	False	NA	NA	False	NA	NA	NA	116585475	116568078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116568508_116569291_116569392_116570732_116570817_116572684_116572789_116575171_116575311_116575922_116576092_116576661_116576837_116581137_116581199_116585262
tx.2428	chr11	-	1443	5	ISM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	569	0	-160	0	3prime_fragment	FALSE	canonical	3	250	junction_2	32.8252951243397	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	116733706	116728257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157
tx.2429	chr11	-	1652	7	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	130.186298135488	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	116734208	116728257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_116728590_116729815_116729955_116730663_116730753_116731273_116731372_116731894_116732182_116733157_116733547_116733890
tx.2430	chr11	-	1702	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	-34	0	-34	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	116734309	116728257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
tx.2431	chr11	-	1667	6	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	113.206713581837	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	116734312	116728257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_116728590_116729815_116729955_116731273_116731372_116731894_116732182_116733157_116733547_116733890
tx.2432	chr11	+	579	2	FSM	ENSMUSG00000090266.11	ENSMUST00000128784.2	585	2	-6	12	0	-12	multi-exon	FALSE	canonical	3	40	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTCTTTTTTGAATCAA	8945	False	NA	NA	False	NA	NA	NA	116734380	116736947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_116734601_116736588
tx.2433	chr11	+	994	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	279	3	2	-3	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGACTACTCCCAATCATT	8947	False	NA	NA	False	NA	NA	NA	116734382	116740563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
tx.2434	chr11	+	1074	6	NIC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	-1	8	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	44.7812460746684	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTATGAAGATGATCAAT	8950	False	NA	NA	False	NA	NA	NA	116734385	116740463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739726_116739965_116740041_116740127_116740215
tx.2435	chr11	-	1177	2	ISM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	946	12	-62	-7	3prime_fragment	FALSE	canonical	3	1858	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTGAGAATGTGTCCT	6949	False	NA	NA	False	NA	NA	NA	116742974	116740738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_116741788_116742846
tx.2436	chr11	+	2341	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.80424857096892	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	NA	False	NA	NA	NA	116744583	116765538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
tx.2437	chr11	+	2393	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-18	923	-18	0	multi-exon	FALSE	canonical	3	74	junction_12	6.07076326887045	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	NA	False	NA	NA	NA	116744627	116765538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
tx.2438	chr11	+	593	2	FSM	ENSMUSG00000086859.5	ENSMUST00000149822.3	600	2	7	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	0	389	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	882	False	NA	NA	False	NA	NA	NA	116967615	116969781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_116968029_116969601
tx.2439	chr11	+	2833	17	FSM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	33	0	33	0	multi-exon	TRUE	canonical	3	28	junction_16	82.8488599423673	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGTGTCCTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	117006030	117050091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
tx.2440	chr11	+	4683	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-32	3	-32	0	multi-exon	FALSE	canonical	3	319	junction_5	24.9420662068455	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGTGTCCTTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	117006031	117050091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
tx.2441	chr11	+	1829	9	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	32035	-12	-7796	12	intron_retention	FALSE	canonical	3	320	junction_1	23.9970701336642	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGATATTTTTCAGAG	NA	False	NA	NA	False	NA	NA	NA	117038098	117048397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
tx.2442	chr11	+	1806	8	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	33295	-12	-6536	12	intron_retention	FALSE	canonical	3	337	junction_1	19.6302556981693	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGATATTTTTCAGAG	NA	False	NA	NA	False	NA	NA	NA	117039358	117048397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
tx.2443	chr11	-	698	2	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGACAAGCCTTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	117066049	117065255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_117065657_117065752
tx.2444	chr11	+	2909	10	NIC	ENSMUSG00000059248.14	novel	647	4	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	178.114819397177	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	117198983	117253139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_117199098_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
tx.2445	chr11	+	1340	10	FSM	ENSMUSG00000059248.14	ENSMUST00000100193.8	2924	10	-17	1601	-17	-159	multi-exon	FALSE	canonical	3	18	junction_1	196.831569283656	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGTGCTCTTATTGGC	NA	False	NA	NA	False	NA	NA	NA	117222528	117251533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_117222680_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
tx.2446	chr11	+	2847	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	74	11	-9	0	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	117223244	117253139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
tx.2447	chr11	-	755	4	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_3	0.816496580927726	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCTCTCTTCAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	117302654	117298486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_117298870_117299291_117299429_117301886_117302033_117302565
tx.2448	chr11	+	638	2	FSM	ENSMUSG00000054418.7	ENSMUST00000155384.2	1784	2	87	1059	87	-1059	multi-exon	FALSE	canonical	3	27	junction_1	0	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTCTCAGAGCTTTCA	NA	False	NA	NA	False	NA	NA	NA	117502159	117503624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_117502261_117503087
tx.2449	chr11	-	2912	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	-44	-3	-25	3	multi-exon	FALSE	canonical	3	224	junction_9	41.6618095045227	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	NA	False	NA	NA	NA	117671509	117656810	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
tx.2450	chr11	+	1520	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	437	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	117700493	117705109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
tx.2451	chr11	-	1227	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	230	-17	5	17	multi-exon	FALSE	canonical	3	796	junction_5	107.729084074615	351	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTTTCCCTAACTTG	NA	False	NA	NA	False	NA	NA	NA	117716688	117706334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
tx.2452	chr11	+	2242	10	NIC	ENSMUSG00000017718.16	novel	2327	11	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	15.3984126166015	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	117716743	117730734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_117716833_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
tx.2453	chr11	+	2170	8	NIC	ENSMUSG00000017718.16	novel	2327	11	NA	NA	14	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	16.1283120313191	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAACTGGGGTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	117723069	117730729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726491_117726634_117727233_117727339_117729318
tx.2454	chr11	+	2274	9	NNC	ENSMUSG00000017718.16	novel	2327	11	NA	NA	74	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16.8281757775464	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGGGGTTTTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	117723172	117730731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726760_117727233_117727339_117729318
tx.2455	chr11	+	927	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	27	-7	27	-4	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	1239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCTGTCTTGGAGAA	NA	False	NA	NA	False	NA	NA	NA	117740103	117746565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
tx.2456	chr11	-	2552	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_1	0	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	117860012	117856904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_117859145_117859700
tx.2457	chr11	+	2261	10	FSM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	602	0	9	0	multi-exon	TRUE	canonical	1	116	junction_9	67.5268579397108	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	117877719	117914837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
tx.2458	chr11	+	1498	5	ISM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	17134	0	2631	0	3prime_fragment	FALSE	canonical	1	116	junction_4	98.7607589075742	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	117894251	117914837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
tx.2459	chr11	+	1423	4	ISM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	19059	0	4556	0	3prime_fragment	FALSE	canonical	1	116	junction_3	113.696477029365	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	117896176	117914837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_117896718_117905399_117905549_117910432_117910559_117914230
tx.2460	chr11	+	946	4	NNC	ENSMUSG00000017715.12	novel	3113	3	NA	NA	-4278	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_1	147.648983139818	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	117898890	117914837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_117898955_117905399_117905549_117910432_117910559_117914230
tx.2461	chr11	+	703	2	ISM	ENSMUSG00000017715.12	ENSMUST00000155507.2	3113	3	7294	0	7294	0	3prime_fragment	FALSE	canonical	1	116	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	117910462	117914837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_117910559_117914230
tx.2462	chr11	-	1721	10	NNC	ENSMUSG00000017132.18	novel	545	6	NA	NA	-10	3861	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	11.5256022043466	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTTAAAAGTGTCCGA	8622	False	NA	NA	False	NA	NA	NA	118139396	118071936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_118072737_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
tx.2463	chr11	-	2362	14	ISM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	90	8955	39	-6218	5prime_fragment	FALSE	canonical	3	126	junction_5	7.95549752236794	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGCCCACAAGCCTCATG	NA	False	NA	NA	False	NA	NA	NA	118180967	118159431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
tx.2464	chr11	-	2843	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	30	0	1	0	multi-exon	FALSE	canonical	3	81	junction_4	37.662979170533	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9022	False	NA	NA	False	NA	NA	NA	118309848	118297114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309755
tx.2465	chr11	-	4085	4	FSM	ENSMUSG00000025575.15	ENSMUST00000017620.10	4182	4	90	7	27	-6	multi-exon	FALSE	canonical	3	163	junction_2	3.68178700572909	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGGTTCTCTTGTCTA	9048	False	NA	NA	False	NA	NA	NA	118309822	118297121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399
tx.2466	chr11	+	2517	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAAAGGTGCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	118367771	118378602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
tx.2467	chr11	+	2508	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	125	1431	-6	5	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGGTGCTTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	118367779	118378604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
tx.2468	chr11	+	3713	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	94	0	94	0	multi-exon	TRUE	canonical	3	204	junction_1	10.9630059746403	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTGTTCTCTTCCCC	NA	False	NA	NA	False	NA	NA	NA	118913881	118922096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
tx.2469	chr11	-	1405	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	41	2134	-17	614	multi-exon	TRUE	canonical	3	19	junction_4	2.91547594742265	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCTTTTATTTAAACG	NA	False	NA	NA	False	NA	NA	NA	118931754	118929264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
tx.2470	chr11	-	791	3	Antisense	novelGene_ENSMUSG00000039963.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGGCTCCACGGGCGT	7504	False	NA	NA	False	NA	NA	NA	119143772	119142597	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr11_-_119142994_119143272_119143497_119143601
tx.2471	chr11	+	3362	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	2	-1	0	1	multi-exon	TRUE	canonical	3	38	junction_1	100.783495768854	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	NA	False	NA	NA	NA	119158853	119176281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
tx.2472	chr11	+	3493	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	141	-1	0	1	multi-exon	FALSE	canonical	3	393	junction_7	40.3001893687597	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	NA	False	NA	NA	NA	119158853	119176281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
tx.2473	chr11	-	1472	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	37	0	-34	0	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	1802	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	NA	False	NA	NA	NA	119190878	119179188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
tx.2474	chr11	+	2659	17	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	-14	-24	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	13.6358901432946	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATACAAGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	119246368	119271851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_119246466_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
tx.2475	chr11	+	1257	3	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	16293	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATATTCTGTGGGTCCA	1716	False	NA	NA	False	NA	NA	NA	119269767	119271883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_119270079_119270684_119270758_119271010
tx.2476	chr11	+	1385	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	28	3657	0	15	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATGGGTCACTCTTAC	6282	False	NA	NA	False	NA	NA	NA	119382200	119398592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
tx.2477	chr11	+	1447	8	FSM	ENSMUSG00000039850.17	ENSMUST00000106245.9	5126	8	8	3671	8	15	multi-exon	FALSE	canonical	3	37	junction_3	3.65892813567591	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATGGGTCACTCTTAC	6545	False	NA	NA	False	NA	NA	NA	119382463	119398592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
tx.2478	chr11	+	596	3	NNC	ENSMUSG00000087675.2	novel	1705	4	NA	NA	17261	13	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	3	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGGAGCCAATCAACC	2112	False	NA	NA	False	NA	NA	NA	119456716	119459885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_119456892_119459088_119459263_119459638
tx.2479	chr11	+	1546	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	9	2	9	-2	multi-exon	FALSE	canonical	3	311	junction_5	11.6303613925986	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGTTTAGTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	119804644	119810372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
tx.2480	chr11	+	2113	15	FSM	ENSMUSG00000025372.17	ENSMUST00000106233.2	2442	15	329	0	-24	0	multi-exon	TRUE	canonical	2	2	junction_13	13.1158495799579	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	119833917	119897608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119893863_119893912_119897184
tx.2481	chr11	-	873	6	ISM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	20096	-9	1326	9	3prime_fragment	FALSE	canonical	3	110	junction_5	9.32952303175248	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGTCTTTCTCTACT	NA	False	NA	NA	False	NA	NA	NA	119957557	119955246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519
tx.2482	chr11	-	2734	13	FSM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	36	0	5	0	multi-exon	FALSE	canonical	3	76	junction_11	8.42944574426786	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	119989521	119981356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
tx.2483	chr11	+	500	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	0	281	0	10	multi-exon	FALSE	canonical	3	883	junction_2	30.5	322	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTCTCCCAAGGACAA	NA	False	NA	NA	False	NA	NA	NA	119989753	119991250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_119989892_119989973_119990085_119990999
tx.2484	chr11	+	561	2	FSM	ENSMUSG00000078572.4	ENSMUST00000186913.2	401	2	-150	-10	5	10	multi-exon	FALSE	canonical	3	883	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTCTCCCAAGGACAA	NA	False	NA	NA	False	NA	NA	NA	119989774	119991250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_119990085_119990999
tx.2485	chr11	-	1623	2	FSM	ENSMUSG00000061306.17	ENSMUST00000146641.2	971	2	522	-1174	522	5	multi-exon	FALSE	canonical	3	392	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	NA	False	NA	NA	False	NA	NA	NA	119997292	119995272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_119996863_119997259
tx.2486	chr11	-	1789	3	ISM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	41893	487	-865	5	3prime_fragment	FALSE	canonical	3	392	junction_1	32.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	NA	False	NA	NA	False	NA	NA	NA	120000279	119995272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_119996863_119997259_119997437_120000257
tx.2487	chr11	-	4020	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	47	487	-12	5	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	5043	False	NA	NA	False	NA	NA	NA	120042125	119995272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
tx.2488	chr11	-	1665	11	FSM	ENSMUSG00000061306.17	ENSMUST00000076697.13	1672	11	13	-6	-11	6	multi-exon	FALSE	canonical	2	6	junction_1	172.084979007466	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTTTCCTTGTCAGT	5009	False	NA	NA	False	NA	NA	NA	120042159	120009691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120009971_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
tx.2489	chr11	-	1233	2	ISM	ENSMUSG00000075389.4	ENSMUST00000145437.2	646	3	-103	253	-103	-253	5prime_fragment	FALSE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTCTCTCTGG	6040	False	NA	NA	False	NA	NA	NA	120080781	120078785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_120079503_120080265
tx.249	chr1	+	1173	4	ISM	ENSMUSG00000026199.18	ENSMUST00000127625.3	1167	5	-1	-4	-1	4	intron_retention	TRUE	canonical	3	96	junction_1	11.0855260988773	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTTTCTTGTTTTCA	75	False	NA	NA	False	NA	NA	NA	75168834	75172182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706
tx.2490	chr11	-	1902	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	50	0	-3	0	multi-exon	TRUE	canonical	3	5636	junction_4	454.292680988809	6513	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTTTTCTGGTTTGG	NA	False	NA	NA	False	NA	NA	NA	120239318	120236515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
tx.2491	chr11	-	3157	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	36	0	7	0	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	120269554	120260387	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
tx.2492	chr11	-	1825	3	FSM	ENSMUSG00000025384.16	ENSMUST00000148520.2	1779	3	-26	-20	0	20	multi-exon	FALSE	canonical	3	28	junction_2	20.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTTAGAAGGAAAGACCCA	NA	False	NA	NA	False	NA	NA	NA	120269561	120266975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120268488_120269153_120269273_120269367
tx.2493	chr11	-	1709	2	ISM	ENSMUSG00000025384.16	ENSMUST00000154826.2	2934	4	-2	3124	-2	20	5prime_fragment	FALSE	canonical	3	20	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTTAGAAGGAAAGACCCA	NA	False	NA	NA	False	NA	NA	NA	120269564	120266975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_120268488_120269367
tx.2494	chr11	-	809	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	7	-3	7	3	multi-exon	FALSE	canonical	3	42	junction_1	0	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGGGCTTTTGTGTTGT	966	False	NA	NA	False	NA	NA	NA	120348887	120347428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120347989_120348638
tx.2495	chr11	+	2755	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	19	4	-4	-3	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCAATGAGAACATTCT	227	False	NA	NA	False	NA	NA	NA	120348959	120355180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
tx.2496	chr11	-	1344	5	NNC	ENSMUSG00000057594.13	novel	911	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.9048658414922	73	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTCTTGGCCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	120358289	120355693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007_120358065_120358186
tx.2497	chr11	-	1506	4	NNC	ENSMUSG00000057594.13	novel	429	4	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	81.6999932000541	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTCTTGGCCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	120358289	120355693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_120356926_120357479_120357594_120358007_120358065_120358186
tx.2498	chr11	+	2889	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106203.9	2903	22	14	0	14	0	multi-exon	FALSE	canonical	3	105	junction_14	76.3896503775692	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8196	False	NA	NA	False	NA	NA	NA	120358474	120374805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
tx.2499	chr11	+	2872	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	31	-3	31	3	multi-exon	FALSE	canonical	3	286	junction_14	47.8204313112466	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATTGATTGTTCGGGC	8213	False	NA	NA	False	NA	NA	NA	120358491	120374808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
tx.25	chr1	+	2893	8	FSM	ENSMUSG00000057715.14	ENSMUST00000171690.9	6158	8	214	3051	50	-1233	multi-exon	FALSE	canonical	3	8	junction_7	6.29868791001389	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGTTGTTAATACATG	NA	False	NA	NA	False	NA	NA	NA	11484542	11668984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374_11666542_11667188
tx.2500	chr11	+	959	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	46	311	46	297	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	647	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCCTGAACCTTG	9001	False	NA	NA	False	NA	NA	NA	120375484	120379580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
tx.2501	chr11	+	1987	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	36	0	-12	0	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	False	NA	NA	False	NA	NA	NA	120382701	120390013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
tx.2502	chr11	-	1197	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	8	0	8	0	multi-exon	FALSE	canonical	3	334	junction_4	30.2861354418156	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCATGGCAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	120440545	120433713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
tx.2503	chr11	-	1034	2	ISM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	11021	1	-996	-1	3prime_fragment	FALSE	canonical	3	2110	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACTGCTGCTTTATTT	5002	False	NA	NA	False	NA	NA	NA	120453058	120451124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_120452087_120452986
tx.2504	chr11	-	2477	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	379	5	-33	2	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	721	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGTCACTGCTGCTTT	3746	False	NA	NA	False	NA	NA	NA	120463700	120451128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
tx.2505	chr11	-	1983	6	FSM	ENSMUSG00000025132.14	ENSMUST00000067936.6	2150	6	172	-5	172	0	multi-exon	TRUE	canonical	3	51	junction_5	1338.58961597646	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTCTGTGCAGCTT	NA	False	NA	NA	False	NA	NA	NA	120472034	120468929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120471815
tx.2506	chr11	-	1844	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	21	2	21	-2	multi-exon	FALSE	canonical	3	3168	junction_5	160.793780974265	1022	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTGGTCTGTGCAGC	NA	False	NA	NA	False	NA	NA	NA	120472429	120468931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
tx.2507	chr11	-	485	2	ISM	ENSMUSG00000025134.3	ENSMUST00000155325.2	648	4	552	0	552	0	3prime_fragment	FALSE	canonical	3	4441	junction_1	0	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	7566	False	NA	NA	False	NA	NA	NA	120485931	120485334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_120485694_120485805
tx.2508	chr11	-	839	5	ISM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	638	2388	504	0	3prime_fragment	FALSE	canonical	3	3877	junction_4	220.512329587259	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	4944	False	NA	NA	False	NA	NA	NA	120488553	120485334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460
tx.2509	chr11	+	751	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	53	2425	34	-3	multi-exon	FALSE	canonical	3	903	junction_1	470.5	239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCCAAAACCTTCATC	3953	False	NA	NA	False	NA	NA	NA	120489299	120496599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120489431_120490067_120490195_120496106
tx.2510	chr11	+	837	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	122	3	122	-3	multi-exon	FALSE	canonical	3	1006	junction_1	419	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCCAAAACCTTCATC	4133	False	NA	NA	False	NA	NA	NA	120489479	120496599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120489697_120490067_120490195_120496106
tx.2511	chr11	+	581	2	FSM	ENSMUSG00000044034.12	ENSMUST00000106195.3	542	2	-38	-1	-38	1	multi-exon	FALSE	canonical	3	9	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAAGGGTTGCTGGAG	1170	False	NA	NA	False	NA	NA	NA	120499264	120499920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120499566_120499640
tx.2512	chr11	-	2379	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-1	1	intron_retention	FALSE	canonical	3	48	junction_6	110.81174601799	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGCTCCCGACCCCG	NA	False	NA	NA	False	NA	NA	NA	120508696	120500911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
tx.2513	chr11	-	1867	14	FSM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	30	-16	2	16	multi-exon	FALSE	canonical	3	184	junction_7	79.5574296680368	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCGGGAAGAAACTGGAAC	NA	False	NA	NA	False	NA	NA	NA	120508732	120500896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
tx.2514	chr11	-	1809	13	FSM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	8	-331	-4	1	multi-exon	FALSE	canonical	3	99	junction_7	91.5034911295131	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGCTCCCGACCCCG	NA	False	NA	NA	False	NA	NA	NA	120508743	120500911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
tx.2515	chr11	-	1703	10	FSM	ENSMUSG00000025138.15	ENSMUST00000080202.12	1727	10	24	0	0	0	multi-exon	FALSE	canonical	2	54	junction_9	11.3376897945103	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	NA	False	NA	NA	NA	120515816	120509197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
tx.2516	chr11	-	1848	11	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	-1	0	intron_retention	FALSE	canonical	2	6	junction_2	26.3286915740224	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	NA	False	NA	NA	NA	120515819	120509197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_120509876_120509974_120510117_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
tx.2517	chr11	-	1623	3	FSM	ENSMUSG00000051510.14	ENSMUST00000106180.2	732	3	8	-899	8	674	multi-exon	FALSE	canonical	2	7	junction_2	175.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCTGCGAGCCTACCG	9621	False	NA	NA	False	NA	NA	NA	120520966	120519158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120520563_120520643_120520708_120520811
tx.2518	chr11	-	1502	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	205	3216	161	674	multi-exon	FALSE	canonical	3	302	junction_2	28	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCTGCGAGCCTACCG	7563	False	NA	NA	False	NA	NA	NA	120524221	120519158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120520563_120520643_120520708_120524187
tx.252	chr1	-	1477	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	41	1322	-10	62	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCCCTTTGTAACTG	NA	False	NA	NA	False	NA	NA	NA	75195897	75192193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
tx.2520	chr11	-	1544	9	NIC	ENSMUSG00000025140.16	novel	2914	8	NA	NA	3	-1053	combination_of_known_junctions	FALSE	canonical	2	46	junction_1	319.603269695415	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACTACTTCCTGCTGAT	NA	False	NA	NA	False	NA	NA	NA	120534571	120527590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
tx.2521	chr11	-	1853	8	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	10	4	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	343.012048339592	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGAGCTCCAGTCAACC	NA	False	NA	NA	False	NA	NA	NA	120534585	120530237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534528
tx.2522	chr11	-	1867	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	-4	-2	-4	2	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	NA	False	NA	NA	NA	120534578	120530239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
tx.2523	chr11	-	1856	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_7	342.313318705635	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	NA	False	NA	NA	NA	120534585	120530239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534505
tx.2524	chr11	+	1786	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	34	0	0	0	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	284	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	120563851	120600273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
tx.2525	chr11	+	2315	15	ISM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	374	0	7	0	3prime_fragment	FALSE	canonical	3	887	junction_2	62.0699079215344	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	120564191	120600273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
tx.2526	chr11	+	2091	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	243.577411833601	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	120564177	120600273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
tx.2527	chr11	+	1890	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	238.262376383683	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	120564191	120600273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
tx.2528	chr11	-	612	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	556	junction_4	137.848422189012	335	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	120604570	120601767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
tx.2529	chr11	-	560	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_3	359.512942125253	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	120604570	120601767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_120602133_120602215_120602305_120602528_120602583_120604518
tx.2530	chr11	+	2498	18	FSM	ENSMUSG00000025145.14	ENSMUST00000026139.14	2492	18	-6	0	-6	0	multi-exon	FALSE	canonical	3	36	junction_12	7.88805763716247	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	6058	False	NA	NA	False	NA	NA	NA	120604744	120611954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
tx.2531	chr11	+	2361	18	NNC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	14.5178568008493	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	6135	False	NA	NA	False	NA	NA	NA	120604821	120611954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609327_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
tx.2532	chr11	+	932	5	FSM	ENSMUSG00000018012.12	ENSMUST00000134322.2	717	5	192	-407	192	3	multi-exon	FALSE	canonical	3	54	junction_2	3.80788655293195	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGCTGTCTGCCCTAC	4534	False	NA	NA	False	NA	NA	NA	120613031	120614798	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
tx.2533	chr11	-	891	8	FSM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	0	1	0	-1	multi-exon	FALSE	canonical	3	81	junction_3	11.7438650940369	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGATCTGTGCTATCT	9984	False	NA	NA	False	NA	NA	NA	120618107	120616225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
tx.2534	chr11	-	868	7	FSM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	-39	1	-1	-1	multi-exon	FALSE	canonical	3	29	junction_2	29.9035486560077	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGATCTGTGCTATCT	9983	False	NA	NA	False	NA	NA	NA	120618108	120616225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
tx.2535	chr11	+	1592	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	-2	-3	multi-exon	FALSE	canonical	3	1960	junction_1	0	902	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTTACAAGAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	120653617	120655242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr11_+_120653817_120653849
tx.2536	chr11	+	1856	14	FSM	ENSMUSG00000025156.18	ENSMUST00000116305.8	1827	14	-29	0	1	0	multi-exon	TRUE	canonical	3	682	junction_1	155.049677093711	328	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1395	False	NA	NA	False	NA	NA	NA	120675101	120679928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
tx.2537	chr11	+	1927	13	FSM	ENSMUSG00000025156.18	ENSMUST00000100134.10	1925	13	3	-5	3	0	multi-exon	FALSE	canonical	3	682	junction_1	150.079122650539	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1397	False	NA	NA	False	NA	NA	NA	120675103	120679928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
tx.2538	chr11	+	1978	14	FSM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	22	0	22	0	multi-exon	FALSE	canonical	3	238	junction_1	255.452956564905	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1656	False	NA	NA	False	NA	NA	NA	120675362	120679928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
tx.2539	chr11	+	1790	13	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	605	0	605	0	3prime_fragment	FALSE	canonical	3	883	junction_12	108.213780186362	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	2239	False	NA	NA	False	NA	NA	NA	120675945	120679928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr11_+_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
tx.2540	chr11	-	2115	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	259.578401924278	74	1	1	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	NA	False	NA	NA	NA	120687221	120680026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
tx.2541	chr11	-	1835	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	245.913368110366	113	1	1	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	NA	False	NA	NA	NA	120687221	120680026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
tx.2542	chr11	+	2250	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	-8	2093	2	0	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	NA	False	NA	NA	NA	120839898	120849601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
tx.2543	chr11	-	2016	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	-2	1661	-2	238	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTCTTTCTTGTCTGTT	774	False	NA	NA	False	NA	NA	NA	120882158	120854235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
tx.2544	chr11	-	1858	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	-13	1655	-13	244	multi-exon	TRUE	canonical	3	176	junction_1	174.428237039028	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTCTGTTTTTGCG	1001	False	NA	NA	False	NA	NA	NA	120881931	120854229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
tx.2545	chr11	-	1024	4	FSM	ENSMUSG00000025163.7	ENSMUST00000026159.6	982	4	-42	0	-42	0	multi-exon	FALSE	canonical	3	9	junction_2	2.49443825784929	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTTTTTGTTGCTTT	7854	False	NA	NA	False	NA	NA	NA	120930286	120927572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_120927977_120928505_120928643_120928861_120929177_120930118
tx.2546	chr11	-	1691	3	FSM	ENSMUSG00000039337.4	ENSMUST00000039146.4	2046	3	355	0	355	0	multi-exon	FALSE	canonical	3	61	junction_1	13.5	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTGCAGTCTCCTCAT	NA	False	NA	NA	False	NA	NA	NA	121009148	121007040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_121008523_121008652_121008727_121009013
tx.2547	chr11	+	1735	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	10	0	-4	0	multi-exon	FALSE	canonical	3	732	junction_1	1	1241	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	121036978	121039145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_121037049_121037353_121037428_121037554
tx.2548	chr11	-	1291	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	12	5	12	-5	multi-exon	FALSE	canonical	3	143	junction_7	19.9483708607996	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTGTGTGATCTGGGC	NA	False	NA	NA	False	NA	NA	NA	121095525	121068421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
tx.2549	chr11	+	2163	13	FSM	ENSMUSG00000039307.17	ENSMUST00000106117.8	2149	13	-2	-12	0	4	multi-exon	FALSE	canonical	3	14	junction_2	4.64503916979059	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCTAATCAGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	121095258	121113485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
tx.2550	chr11	-	2362	7	NIC	ENSMUSG00000039294.15	novel	2417	7	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	17.7709188157381	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	121120100	121113413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119884
tx.2551	chr11	-	2384	7	FSM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	33	0	29	0	multi-exon	FALSE	canonical	0	0	junction_6	26.4790273403101	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	121120102	121113413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119864
tx.2552	chr11	+	3136	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	-20	1279	-20	-1279	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCAGCTGTTCTCCTGT	NA	False	NA	NA	False	NA	NA	NA	121128058	121145403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
tx.2553	chr11	-	2272	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	41	8	-3	-8	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAAAGAGCAGAGCCAT	NA	False	NA	NA	False	NA	NA	NA	121245230	121218057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
tx.2554	chr11	-	2243	10	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	138.714023252567	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAAAGAGCAGAGCCAT	NA	False	NA	NA	False	NA	NA	NA	121245235	121218057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221025_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
tx.2556	chr11	+	2683	28	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	-971	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	59.1375834160545	2	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	NA	False	NA	NA	NA	121389890	121507990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr11_+_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469620_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
tx.2557	chr11	-	3047	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	15	-198	15	198	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGGGTCTGGTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	121563964	121506824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
tx.2558	chr11	-	2773	4	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTGCTTGGTTCC	NA	False	NA	NA	False	NA	NA	NA	121816166	121795182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
tx.2559	chr11	-	450	3	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	175	junction_1	12.5	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGTGTCTGATTTATG	NA	False	NA	NA	False	NA	NA	NA	121816169	121798627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_121798837_121799014_121799142_121816055
tx.2560	chr11	-	3221	4	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	17.326921891156	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGACCTGATTCTTAT	NA	False	NA	NA	False	NA	NA	NA	121847552	121832031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr11_-_121834966_121836089_121836151_121836329_121836457_121847453
tx.2561	chr12	+	953	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	-9	3062	-9	75	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGCTCTGCATGCGT	NA	False	NA	NA	False	NA	NA	NA	3285494	3288348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
tx.2562	chr12	+	925	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	-100	-13	-78	13	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTGCATAGATTTGTG	NA	False	NA	NA	False	NA	NA	NA	3285425	3288286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
tx.2563	chr12	-	2581	3	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	56622	43	56622	-43	3prime_fragment	FALSE	canonical	3	1286	junction_2	74.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCTACTTCTGTTCAT	6596	False	NA	-67	True	NA	NA	NA	3303347	3297470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_3299871_3302611_3302714_3303268
tx.2564	chr12	-	3448	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	22	43	22	-43	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCTACTTCTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	3359947	3297470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
tx.2565	chr12	+	4370	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	-7	2428	-7	2	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTGACCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	3415182	3454066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
tx.2566	chr12	+	1947	6	ISM	ENSMUSG00000020668.11	ENSMUST00000219895.2	2962	8	726	867	726	2	3prime_fragment	FALSE	canonical	3	43	junction_1	11.2071405808975	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTGACCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	3438106	3454066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
tx.2567	chr12	-	3112	3	FSM	ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	13	-1202	-13	-230	multi-exon	FALSE	canonical	3	62	junction_1	5.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTATCTTGCATGTA	NA	False	NA	NA	False	NA	NA	NA	3476727	3454107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_3456712_3457643_3457925_3476500
tx.2568	chr12	+	3423	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	60	-1155	44	450	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	NA	False	NA	NA	False	NA	NA	NA	3941787	3958997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
tx.2569	chr12	+	1907	6	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	10653	-1155	2100	450	3prime_fragment	FALSE	canonical	3	122	junction_5	9.85900603509299	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	NA	False	NA	NA	False	NA	NA	NA	3952380	3958997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
tx.257	chr1	-	1679	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	140	669	-50	0	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	75294141	75285208	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
tx.2570	chr12	-	2208	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	329	1811	0	4	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCAGATTCTTTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	4283965	4263477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
tx.2571	chr12	-	2177	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	14.9666295470958	28	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGATTCTTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	4283965	4263478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
tx.2572	chr12	+	569	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	19	3252	19	-3252	multi-exon	FALSE	canonical	3	212	junction_1	0	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTACTATCATCATTAT	NA	False	NA	NA	False	NA	NA	NA	4284045	4286698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_4284279_4286362
tx.2573	chr12	-	321	2	NIC	ENSMUSG00000112819.2	novel	457	3	NA	NA	-23	3	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	0	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	4603808	4602542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_4602746_4603690
tx.2574	chr12	+	776	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	7	397	7	-4	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	841	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTTCTGTTAAACTTC	NA	False	NA	NA	False	NA	NA	NA	4867550	4877262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
tx.2575	chr12	-	952	4	FSM	ENSMUSG00000020635.9	ENSMUST00000020964.7	976	4	24	0	24	0	multi-exon	FALSE	canonical	3	44	junction_1	6.34209919681348	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTGTGGGAGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	4891567	4883173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_4883796_4884738_4884852_4888168_4888217_4891398
tx.2576	chr12	+	596	2	FSM	ENSMUSG00000051721.7	ENSMUST00000219069.2	605	2	13	-4	-6	4	multi-exon	FALSE	canonical	3	75	junction_1	0	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGTGTGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	4893340	4899347	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_4893452_4898862
tx.2577	chr12	+	1749	2	FSM	ENSMUSG00000051721.7	ENSMUST00000053034.6	2892	2	4	1139	4	7	multi-exon	FALSE	canonical	3	16	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGAAACGTGCCCACT	NA	False	NA	NA	False	NA	NA	NA	4893350	4901774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_4893452_4900126
tx.2578	chr12	-	2892	2	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	27433	2218	at_least_one_novel_splicesite	TRUE	canonical	3	227	junction_1	0	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTAAGACGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	4929831	4926813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_4927640_4927765
tx.2579	chr12	-	1497	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	205	994	-61	364	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAATACTAATCTATATA	NA	False	NA	NA	False	NA	NA	NA	4957500	4930025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
tx.258	chr1	+	1525	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	15	-1	2	1	multi-exon	FALSE	canonical	3	122	junction_1	48.5514475124641	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	NA	False	NA	NA	NA	75412588	75419819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
tx.2580	chr12	-	1131	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	205	4411	-61	-3053	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCCTCTCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	4957500	4933442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
tx.2581	chr12	+	2720	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	188	junction_5	23.7533623350932	82	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	NA	False	NA	NA	NA	8258135	8335759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
tx.2582	chr12	+	2574	6	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	91.7243697171041	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	NA	False	NA	NA	NA	8258137	8335759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_8258205_8270599_8270756_8288442_8288616_8318363_8318599_8325807_8325891_8333899
tx.2583	chr12	+	2949	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	7	3	7	-3	multi-exon	FALSE	canonical	3	118	junction_1	12.8765506078125	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCAGTGTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	8363438	8393821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
tx.2584	chr12	+	2520	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	-4	641	-4	12	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTACTGCTTCTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	8821318	8843074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
tx.2585	chr12	+	1395	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	378	0	378	0	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	1063	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCATGTTTATGCTA	NA	False	NA	NA	False	NA	NA	NA	8972041	8988742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
tx.2586	chr12	+	4353	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	-40	-1	-4	0	multi-exon	FALSE	canonical	3	49	junction_5	11.1856972283898	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTAATGCTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	9024006	9078847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
tx.2587	chr12	+	790	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	1	209	1	-209	multi-exon	FALSE	canonical	3	121	junction_2	13	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATTCCCAACTTTGTA	NA	False	NA	NA	False	NA	NA	NA	9079997	9086185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_9080197_9084921_9085089_9085761
tx.2588	chr12	+	1459	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	21	0	21	0	multi-exon	FALSE	canonical	3	67	junction_1	0	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGCATTTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	10440792	10445562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_10441227_10444537
tx.2589	chr12	-	1702	12	ISM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-53	7187	-18	1634	5prime_fragment	FALSE	canonical	3	39	junction_9	5.8124972229621	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTTACTTTTAATATC	NA	False	NA	NA	False	NA	NA	NA	11315820	11296107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
tx.2590	chr12	+	2119	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	-16	1270	8	-1270	multi-exon	FALSE	canonical	3	624	junction_2	43.5943704599856	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGTTTAATTTTTTT	4544	False	NA	NA	False	NA	NA	NA	11316113	11336385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
tx.2591	chr12	+	3838	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	227	1538	8	204	multi-exon	TRUE	canonical	3	574	junction_19	50.8148542090207	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4544	False	NA	NA	False	NA	NA	NA	11316113	11368248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
tx.2592	chr12	+	1574	10	ISM	ENSMUSG00000020608.8	ENSMUST00000218022.2	5272	26	31104	1532	2686	204	3prime_fragment	FALSE	canonical	3	574	junction_2	56.2988059869439	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	NA	False	NA	NA	False	NA	NA	NA	11347209	11368248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
tx.2593	chr12	+	1493	13	FSM	ENSMUSG00000020589.18	ENSMUST00000069066.14	9452	13	-7	7966	-7	-340	multi-exon	FALSE	canonical	3	12	junction_2	32.1829621936135	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGATGTCTGAAGCGAA	NA	False	NA	NA	False	NA	NA	NA	12312132	12423000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_12312240_12326343_12326417_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
tx.2594	chr12	+	1374	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	-32	429	6	-373	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGCCGAGCATAAATTGA	NA	False	NA	NA	False	NA	NA	NA	12312145	12422967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
tx.2595	chr12	-	2597	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	74	3	-15	0	multi-exon	FALSE	canonical	3	794	junction_2	66.5	95	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCGATGTTTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	12991841	12986096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_12987612_12989610_12990488_12991636
tx.2596	chr12	-	2496	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	22	2324	22	-2324	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	253	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGTCTTCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	13299192	13269297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
tx.2597	chr12	+	2306	8	FSM	ENSMUSG00000057469.9	ENSMUST00000221541.2	2362	8	56	0	-9	0	multi-exon	FALSE	canonical	2	121	junction_1	60.8859757318245	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7588	False	NA	NA	False	NA	NA	NA	16861155	16876753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
tx.2598	chr12	+	1948	5	ISM	ENSMUSG00000057469.9	ENSMUST00000221541.2	2362	8	7816	2	-1346	-2	3prime_fragment	FALSE	canonical	2	171	junction_2	40.7277546643563	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTGCGTGCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	16868915	16876751	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
tx.2599	chr12	-	1868	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	57	3	6	-3	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTAAGCTGTCATGA	NA	False	NA	NA	False	NA	NA	NA	17050062	17038651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
tx.26	chr1	+	487	3	NNC	ENSMUSG00000099498.2	novel	288	4	NA	NA	9608	15825	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTGTGTGTGAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	13148669	13164711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_13148745_13148829_13148887_13164356
tx.2600	chr12	-	1744	6	FSM	ENSMUSG00000045679.15	ENSMUST00000222203.2	1706	6	6	-44	6	-6	multi-exon	FALSE	canonical	3	14	junction_2	66.9943281181325	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAATTCTTAAGCTGTCA	NA	False	NA	NA	False	NA	NA	NA	17050062	17038654	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_17039897_17042278_17042321_17045614_17045673_17047634_17047705_17047774_17047858_17049813
tx.2601	chr12	+	1747	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	-17	395	-17	-395	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	1683	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTATGAAATTAGT	NA	False	NA	NA	False	NA	NA	NA	17316578	17334376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
tx.2602	chr12	-	1445	13	FSM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	-17	-3	-17	0	multi-exon	FALSE	canonical	3	13	junction_8	6.04841577054135	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTCTTGTGTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	17374748	17334722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
tx.2603	chr12	+	3019	21	FSM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	2	0	2	0	multi-exon	FALSE	canonical	3	221	junction_7	25.2103153490788	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTGTTTAGCTTA	NA	False	NA	NA	False	NA	NA	NA	17398460	17480096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
tx.2604	chr12	+	1934	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	274	0	96	0	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGGAATGTTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	17595068	17601085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
tx.2605	chr12	+	1779	11	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	2358	-2	5	2	3prime_fragment	FALSE	canonical	3	389	junction_10	321.856427619521	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGAATGTTTGCAAGTA	NA	False	NA	NA	False	NA	NA	NA	17597152	17601087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
tx.2606	chr12	+	1425	8	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	3174	0	151	0	3prime_fragment	FALSE	canonical	3	389	junction_7	382.474168795643	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGGAATGTTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	17597968	17601085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
tx.2607	chr12	+	957	4	ISM	ENSMUSG00000011179.9	ENSMUST00000221613.2	1982	8	1747	421	-22	0	3prime_fragment	FALSE	canonical	3	389	junction_3	504.482793451758	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGGAATGTTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	17599436	17601085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_17599588_17599668_17599782_17599863_17600079_17600607
tx.2608	chr12	+	1574	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	-52	4	-52	-4	multi-exon	FALSE	canonical	3	71	junction_1	8.52447456836295	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	8572	False	NA	NA	False	NA	NA	NA	17740804	17841930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
tx.2609	chr12	+	2089	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10201	-507	intron_retention	FALSE	canonical	3	46	junction_1	45.4190366354119	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	NA	False	NA	NA	NA	17942188	17954169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17952389
tx.261	chr1	-	1896	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	38	17	0	0	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	NA	False	NA	NA	NA	78465496	78401721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
tx.2610	chr12	+	2854	4	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	34.2150064542836	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	19116391	19127634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_+_19116514_19123371_19123499_19123700_19123762_19125090
tx.2611	chr12	+	1594	4	Fusion	ENSMUSG00000092229.4_ENSMUSG00000116627.2	novel	619	3	NA	NA	13319	3803	multi-exon	FALSE	canonical	1	1	junction_3	38.2738669184195	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGTAGTTATATACAGT	NA	False	NA	NA	False	NA	NA	NA	21053855	21094232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr12_+_21053965_21062987_21063115_21063316_21063378_21092935
tx.2612	chr12	-	974	7	FSM	ENSMUSG00000062352.16	ENSMUST00000076260.12	1921	7	57	890	-8	8	multi-exon	FALSE	canonical	3	216	junction_3	20.4728817924807	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCTTGGGGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	21336228	21320696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
tx.2613	chr12	-	1187	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	-96	610	-8	1	multi-exon	FALSE	canonical	3	43	junction_6	78.2148039411693	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAAGAGAAGCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	21336194	21320703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
tx.2614	chr12	+	2280	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	-2	221	-2	0	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	21336356	21364836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
tx.2615	chr12	+	925	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	4	212	4	-212	multi-exon	FALSE	canonical	3	356	junction_4	39.1131691377725	273	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTTCATGATTATTGA	NA	False	NA	NA	False	NA	NA	NA	21366393	21373608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
tx.2616	chr12	+	882	6	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	1	-212	combination_of_known_splicesites	FALSE	canonical	3	85	junction_2	143.346293987672	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTTCATGATTATTGA	NA	False	NA	NA	False	NA	NA	NA	21366404	21373608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_21366514_21367376_21367430_21367930_21368048_21369770_21369933_21371334_21371457_21373289
tx.2617	chr12	+	690	4	FSM	ENSMUSG00000062054.8	ENSMUST00000223345.2	1890	4	-3	1203	-3	-621	multi-exon	FALSE	canonical	3	412	junction_2	19.3964487013015	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCAATTTTGCTACTC	NA	False	NA	NA	False	NA	NA	NA	21366411	21370156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770
tx.2618	chr12	-	4205	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	72	166	-21	128	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGGATTGCGTATATAA	NA	False	NA	NA	False	NA	NA	NA	21423561	21373683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
tx.2619	chr12	-	1855	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	255	0	-51	0	multi-exon	FALSE	canonical	3	3292	junction_3	152.582764426393	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	False	NA	NA	False	NA	NA	NA	21467182	21440329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
tx.2620	chr12	-	1867	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	72	258	23	0	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	2221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	False	NA	NA	False	NA	NA	NA	21467566	21440329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
tx.2621	chr12	+	655	5	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-28	166	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTTCTGTCTTAGTTA	6072	False	NA	NA	False	NA	NA	NA	21593279	21604688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
tx.2622	chr12	-	2780	5	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	21.2058364607483	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGTTGTTGTAG	NA	False	NA	NA	False	NA	NA	NA	22302663	22291517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_-_22292923_22292999_22294077_22295404_22295466_22295667_22295795_22302553
tx.2623	chr12	-	2860	4	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	11.0855260988773	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	22302675	22291526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_-_22294077_22295404_22295466_22295667_22295795_22302553
tx.2624	chr12	-	879	4	NNC	ENSMUSG00000073164.12	novel	3370	5	NA	NA	8572	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.56846672960488	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCTGAGCTCATCCAT	NA	False	NA	NA	False	NA	NA	NA	23051427	23009674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_23010256_23042788_23042850_23043051_23043179_23051317
tx.2625	chr12	-	2143	4	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	10.5303793326209	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTGGTCATGAGATC	NA	False	NA	NA	False	NA	NA	NA	23455093	23444667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_-_23446506_23447833_23447895_23448096_23448224_23454976
tx.2626	chr12	+	1989	15	FSM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	223	-3	-29	3	multi-exon	FALSE	canonical	3	207	junction_4	28.2355254592363	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGGAAACTTGCATTCA	NA	False	NA	NA	False	NA	NA	NA	24548580	24608541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
tx.2627	chr12	+	1924	14	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	2076	-5	1805	5	3prime_fragment	FALSE	canonical	3	207	junction_3	27.8701554019739	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAACTTGCATTCATT	NA	False	NA	NA	False	NA	NA	NA	24550433	24608543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
tx.2628	chr12	+	2103	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	41	49	41	-49	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	682	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATGGCATACAAGTAT	NA	False	NA	NA	False	NA	NA	NA	24758280	24764096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
tx.2629	chr12	+	2806	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-28	-427	-14	-4	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTTAGATTCTATCTA	NA	False	NA	NA	False	NA	NA	NA	24881593	25010300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
tx.2630	chr12	+	2677	12	FSM	ENSMUSG00000020646.18	ENSMUST00000221952.2	6792	12	-21	4136	-21	-25	multi-exon	FALSE	canonical	3	26	junction_3	37.4053074415034	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATGCATTAAAATTCTT	NA	False	NA	NA	False	NA	NA	NA	24881586	25010260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
tx.2631	chr12	-	1271	3	FSM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	2	-3	2	1	multi-exon	FALSE	canonical	2	5	junction_1	1	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGATTCTGAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	25146089	25143796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_25144576_25145309_25145374_25145661
tx.2632	chr12	-	704	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	21	229	21	0	multi-exon	TRUE	canonical	3	10789	junction_4	2567.89392736971	927	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	NA	False	NA	NA	NA	28685931	28681081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
tx.2633	chr12	+	1432	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	25	-2	3	2	multi-exon	TRUE	canonical	3	155	junction_3	35.1318217284442	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTAGTTTGAGTTACT	NA	False	NA	NA	False	NA	NA	NA	28699625	28709590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
tx.2634	chr12	+	1656	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-4	0	-4	0	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	442	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	28725225	28732174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
tx.2635	chr12	-	3197	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	33	0	-10	0	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8263	False	NA	NA	False	NA	NA	NA	28800438	28740626	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
tx.2636	chr12	+	1698	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	19	2374	-17	0	multi-exon	FALSE	canonical	3	234	junction_3	17.1641887370187	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGCTCTTTGTTTGTTTT	1117	False	NA	NA	False	NA	NA	NA	28801820	28917490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
tx.2637	chr12	+	2957	5	FSM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	18	-4	18	4	multi-exon	FALSE	canonical	3	167	junction_1	9.17877987534291	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	30634442	30641218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650
tx.2638	chr12	-	1431	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	16	1307	-2	913	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	509	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGCCTGCTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	30961572	30944961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
tx.2639	chr12	-	1442	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	-13	1637	5	913	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	578	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGCCTGCTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	30961583	30944961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
tx.2640	chr12	+	1730	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	15	5	-9	1	multi-exon	FALSE	canonical	3	40	junction_1	6.36153564813317	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTACTTTGTGTTCAC	8054	False	NA	NA	False	NA	NA	NA	30961681	31010156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
tx.2641	chr12	-	2223	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	36	285	-3	-285	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	860	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTATTCTGAGTG	NA	False	NA	NA	False	NA	NA	NA	31401416	31381560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
tx.2642	chr12	-	1886	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	54	1960	-5	5	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATTTTTATGTGAATTT	NA	False	NA	NA	False	NA	NA	NA	31549561	31536894	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
tx.2643	chr12	-	1738	7	FSM	ENSMUSG00000020650.16	ENSMUST00000020979.9	1949	7	218	-7	218	7	multi-exon	FALSE	canonical	3	313	junction_3	46.7618077780005	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGAGTTTTTATTCTC	NA	False	NA	NA	False	NA	NA	NA	31684380	31645352	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261
tx.2644	chr12	-	1791	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-23	4387	0	7	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGAGTTTTTATTCTC	NA	False	NA	NA	False	NA	NA	NA	31684657	31645352	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
tx.2645	chr12	-	586	5	ISM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-23	33122	0	9986	5prime_fragment	FALSE	canonical	3	339	junction_4	35.979160635012	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGATGTTGTTAATAT	NA	False	NA	NA	False	NA	NA	NA	31684657	31674087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
tx.2646	chr12	-	1769	7	FSM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	4	0	4	0	multi-exon	FALSE	canonical	2	86	junction_6	14.7016627933336	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTATGACTCGCCTGTA	9064	False	NA	NA	False	NA	NA	NA	31704821	31690048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
tx.2647	chr12	+	3008	23	FSM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	-10	-1	-10	1	multi-exon	FALSE	canonical	3	25	junction_22	24.2086317506725	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTTTCTTCCTTCCAG	NA	False	NA	NA	False	NA	NA	NA	31704857	31987630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
tx.2648	chr12	-	2644	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	297	201	-4	-201	multi-exon	FALSE	canonical	3	134	junction_10	30.1004983347452	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGATTTCTGGTTGAC	NA	False	NA	NA	False	NA	NA	NA	32000237	31976453	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
tx.2649	chr12	-	2707	9	FSM	ENSMUSG00000002996.18	ENSMUST00000167458.9	2733	9	0	26	0	-26	multi-exon	FALSE	canonical	3	134	junction_8	33.3164280048147	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGTGTTGGACTT	NA	False	NA	NA	False	NA	NA	NA	32000222	31979407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
tx.2650	chr12	-	988	3	FSM	ENSMUSG00000002996.18	ENSMUST00000175666.2	979	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	134	junction_2	45	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGTAGATTGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	32000242	31989749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_31990506_31993827_31994012_32000194
tx.2651	chr12	+	2242	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	36	2249	36	-2249	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTGGTGTTGTACA	NA	False	NA	NA	False	NA	NA	NA	32870369	32901099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
tx.2652	chr12	+	1496	4	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	22436	1741	21970	-1741	3prime_fragment	FALSE	canonical	3	857	junction_1	69.6291765154682	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	False	NA	NA	False	NA	NA	NA	32892769	32901607	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_32892804_32896704_32896846_32898615_32898751_32900421
tx.2653	chr12	+	2005	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	22	-8	22	8	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	199	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCCCGTTGTTATATT	8447	False	NA	NA	False	NA	NA	NA	33004204	33026911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
tx.2654	chr12	+	1689	4	FSM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	-10	-4	8	4	multi-exon	FALSE	canonical	2	8	junction_2	2.35702260395516	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTACATTGAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	33197699	33301149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849
tx.2655	chr12	+	465	4	FSM	ENSMUSG00000020562.8	ENSMUST00000020878.8	673	4	210	-2	210	2	multi-exon	FALSE	canonical	3	39	junction_3	13.0213499897497	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTCTGGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	33445062	33451268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_33445198_33448277_33448443_33448546_33448635_33451191
tx.2656	chr12	+	2352	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-11	1984	-11	1693	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCTTTCCCTCCT	NA	False	NA	NA	False	NA	NA	NA	33479622	33489407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
tx.2657	chr12	-	1624	5	ISM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	18488	-2	15934	2	3prime_fragment	FALSE	canonical	3	804	junction_3	18.1985576351534	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGTGTTTAAATCAAAG	NA	False	NA	NA	False	NA	NA	NA	36074000	36064553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903
tx.2658	chr12	-	1957	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-30	5	-19	-5	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATATGGGTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	36092518	36064560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
tx.2659	chr12	-	1852	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	15	4	15	-4	multi-exon	FALSE	canonical	3	931	junction_9	81.950499068161	397	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTATATGGTCAGAGC	NA	False	NA	NA	False	NA	NA	NA	36206809	36141837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
tx.266	chr1	-	2070	6	ISM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	46840	1743	7727	1352	3prime_fragment	FALSE	canonical	3	633	junction_3	21.3297913726318	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAGGCAGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	79692646	79681721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590
tx.2660	chr12	+	2419	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	37	0	-7	0	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGTTTCATAATTCGT	NA	False	NA	NA	False	NA	NA	NA	36207149	36247290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
tx.2661	chr12	-	2015	3	NNC	ENSMUSG00000113608.2	novel	549	2	NA	NA	26840	905	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	11	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGTTATCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	38098894	38096186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_38096710_38097291_38097424_38097534
tx.2662	chr12	+	2187	2	Antisense	novelGene_ENSMUSG00000113520.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGAATGCATCTAT	1	True	NA	NA	False	NA	NA	NA	38780111	38801082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr12_+_38780406_38799189
tx.2663	chr12	-	1127	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	53	2530	0	1	multi-exon	FALSE	canonical	3	67	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTAGTGTTTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	40087375	40085819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_40086833_40087261
tx.2664	chr12	-	1113	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	88	-1	88	1	multi-exon	FALSE	canonical	3	220	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTAGTGTTTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	40087936	40085819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_40086833_40087836
tx.2665	chr12	-	550	3	FSM	ENSMUSG00000001627.13	ENSMUST00000170119.8	574	3	215	-191	215	2	multi-exon	FALSE	canonical	3	660	junction_2	16	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTAGTGAGCAGATG	NA	False	NA	NA	False	NA	NA	NA	40254426	40253127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_40253451_40253917_40254014_40254295
tx.2666	chr12	-	1812	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	4	1562	0	2	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTAGTGAGCAGATG	NA	False	NA	NA	False	NA	NA	NA	40273184	40253127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
tx.2667	chr12	-	1567	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	116	505	-12	-505	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	317	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGAAACTTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	40495785	40365549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
tx.2668	chr12	-	1091	8	ISM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	119	7289	-9	2140	5prime_fragment	FALSE	canonical	3	359	junction_2	44.603010788831	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTTGGGTGAGATTA	NA	False	NA	NA	False	NA	NA	NA	40495782	40372333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
tx.2669	chr12	+	360	4	FSM	ENSMUSG00000056899.11	ENSMUST00000140790.2	347	4	-25	12	12	2	multi-exon	FALSE	canonical	3	185	junction_1	32.8667342798493	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAACTCAGTAACTTACT	NA	False	NA	NA	False	NA	NA	NA	41074100	41160944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_41074145_41074559_41074633_41118308_41118446_41160838
tx.267	chr1	-	2771	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	30	1750	-1	1345	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAGGCA	NA	False	NA	NA	False	NA	NA	NA	79739456	79681728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
tx.2670	chr12	+	171	2	ISM	ENSMUSG00000056899.11	ENSMUST00000134965.8	977	6	601219	251483	557236	-251483	internal_fragment	FALSE	canonical	3	237	junction_1	0	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCGAGTAAACCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	41675546	41750542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_41675613_41750437
tx.2671	chr12	-	1878	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	247	336	-11	-336	multi-exon	FALSE	canonical	3	92	junction_1	7	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTGTTGTCATTTTA	NA	False	NA	NA	False	NA	NA	NA	44256862	44252677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_44254189_44254869_44255097_44256722
tx.2672	chr12	+	3461	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	11	10035	-8	4	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTGTATATCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	44315941	44359280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
tx.2673	chr12	-	1785	6	FSM	ENSMUSG00000046314.17	ENSMUST00000053768.14	4553	6	340	2428	-51	-2424	multi-exon	FALSE	canonical	0	0	junction_4	7.73563184232549	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATGGATATTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	45121152	44901694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_44902661_44908007_44908166_44948656_44948823_44949642_44949774_45066249_45066439_45120977
tx.2674	chr12	-	1924	9	ISM	ENSMUSG00000002688.9	ENSMUST00000002765.9	3653	19	260760	0	260760	0	3prime_fragment	FALSE	canonical	3	11	junction_7	2.93417364857638	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTCATACTAATCAA	NA	False	NA	NA	False	NA	NA	NA	50435121	50388013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035
tx.2675	chr12	+	2959	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	233	3611	6	5	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGAACCTATGTGTCC	NA	False	NA	NA	False	NA	NA	NA	51395076	51420158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
tx.2676	chr12	+	1080	9	ISM	ENSMUSG00000035293.14	ENSMUST00000119211.8	2926	16	15	9900	15	-166	5prime_fragment	FALSE	canonical	3	119	junction_8	18.4657622371783	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGCCTATGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	51395085	51410150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968
tx.2677	chr12	+	1971	14	FSM	ENSMUSG00000020952.11	ENSMUST00000219434.2	2749	14	-52	830	18	-830	multi-exon	TRUE	canonical	3	21	junction_13	120.151925523899	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTGTAACTTTTTC	NA	False	NA	NA	False	NA	NA	NA	51424310	51463168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462405
tx.2678	chr12	+	2105	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	-8	-1	-8	1	multi-exon	FALSE	canonical	3	358	junction_5	42.0133700610757	264	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATTCTTGTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	51424354	51496885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
tx.2679	chr12	+	796	5	NNC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	237	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.6749019178793	4	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGACGTTTGAGTGAA	NA	False	NA	NA	False	NA	NA	NA	51738056	51785715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51785325
tx.268	chr1	+	1338	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	86	0	-12	0	multi-exon	FALSE	canonical	3	315	junction_2	2.44948974278318	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	79753820	79759162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
tx.2680	chr12	-	1944	11	ISM	ENSMUSG00000035181.7	ENSMUST00000218254.2	4111	13	4	9260	4	-3106	5prime_fragment	FALSE	canonical	1	15	junction_10	12.1363091588835	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTAGTGTGTATCAGAA	NA	False	NA	NA	False	NA	NA	NA	52018076	51992141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
tx.2681	chr12	-	1383	3	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	-2	-1393	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	74	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTTTTCTTAAAGCC	NA	False	NA	NA	False	NA	NA	NA	52053286	52045682	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_52046657_52051661_52051732_52052947
tx.2682	chr12	-	1167	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1397	0	-1397	multi-exon	FALSE	canonical	3	170	junction_1	5	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCCAGTTTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	52053284	52045686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_52046657_52051661_52051732_52053157
tx.2683	chr12	+	1192	11	FSM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	9	1786	9	-1786	multi-exon	FALSE	canonical	3	215	junction_4	16.265300489078	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGCTCTATGATGATT	NA	False	NA	NA	False	NA	NA	NA	52144528	52357741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
tx.2684	chr12	+	2376	2	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-2	-27220	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTTTTGTAGA	NA	False	NA	NA	False	NA	NA	NA	52550796	52565202	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_52550832_52562861
tx.2685	chr12	-	2012	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	-11	661	-11	-661	multi-exon	FALSE	canonical	3	55	junction_3	5.24404424085076	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATCTGCTCTGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	54250657	54226427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
tx.2686	chr12	-	1331	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	15	0	15	0	multi-exon	FALSE	canonical	3	293	junction_1	0	381	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTTTTATGGTTAA	NA	False	NA	NA	False	NA	NA	NA	54703343	54692176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_54693321_54703156
tx.2687	chr12	-	1052	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	13	3121	-6	5	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGGTTATCAACCTCTA	NA	False	NA	NA	False	NA	NA	NA	54742653	54720245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
tx.2688	chr12	-	1879	13	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	201	-6	-18	6	3prime_fragment	FALSE	canonical	3	824	junction_2	114.005725977056	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTTTCTTTATCT	NA	False	NA	NA	False	NA	NA	NA	54842287	54793127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238
tx.2689	chr12	-	1909	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	24	-5	8	5	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	534	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGTCTTTTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	54842464	54793128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
tx.2690	chr12	-	1057	10	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	18	10496	2	30	5prime_fragment	FALSE	canonical	3	826	junction_9	114.99565209172	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTGTGGTGACATGTCA	NA	False	NA	NA	False	NA	NA	NA	54842470	54803629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
tx.2691	chr12	-	2660	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-51	-1481	28	2	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGCTGTTGAGATGTG	NA	False	NA	NA	False	NA	NA	NA	54909634	54905599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
tx.2692	chr12	-	1454	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	9	1477	9	2	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGCCTTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	54909653	54907078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
tx.2693	chr12	-	1319	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	-78	1485	1	2	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGCCTTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	54909661	54907078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
tx.2694	chr12	-	1190	9	ISM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	277	41225	106	5583	5prime_fragment	TRUE	canonical	3	19	junction_8	7.69638713943107	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAGAGAGACTTAA	NA	False	NA	NA	False	NA	NA	NA	55033015	54981560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
tx.2695	chr12	-	1427	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	-326	4	-326	-4	multi-exon	FALSE	canonical	3	143	junction_4	27.3898536256157	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTGCTCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	55127221	55092449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
tx.2696	chr12	-	1107	8	Fusion	ENSMUSG00000112022.3_ENSMUSG00000062198.6	novel	1105	8	NA	NA	-70	2	multi-exon	FALSE	canonical	3	143	junction_4	24.4423520027957	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAAATGTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	55201751	55092458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55201606
tx.2697	chr12	-	1936	5	FSM	ENSMUSG00000062198.6	ENSMUST00000156852.2	4110	5	-332	2506	-330	-2506	multi-exon	FALSE	canonical	3	143	junction_1	29.9864552756741	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTAGAGAT	NA	False	NA	NA	False	NA	NA	NA	55127225	55103044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
tx.2698	chr12	+	2159	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	252	2087	-12	389	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	145	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2828	False	NA	NA	False	NA	NA	NA	55127298	55160065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
tx.2699	chr12	+	1397	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	-44	2510	-44	-2510	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGATTTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	55246332	55261443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
tx.27	chr1	-	2409	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1440	-32	1440	32	3prime_fragment	FALSE	canonical	3	343	junction_5	37.0135110466435	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	13195947	13183648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
tx.2700	chr12	+	1115	4	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	217	22612	-49	0	5prime_fragment	FALSE	canonical	3	808	junction_1	80.4335474510204	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTCTGTGTC	2571	False	NA	NA	False	NA	NA	NA	55202105	55213746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093
tx.2701	chr12	+	2159	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	254	1233	-12	-1233	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2608	False	NA	NA	False	NA	NA	NA	55202142	55235125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
tx.2702	chr12	+	1397	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	-44	2510	-44	-2510	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGATTTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	55246332	55261443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
tx.2703	chr12	+	1228	3	NIC	ENSMUSG00000095595.3	novel	3922	5	NA	NA	19	-2510	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	60	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGATTTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	55171272	55186379	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_55171508_55177400_55177575_55185560
tx.2704	chr12	+	1116	4	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	216	22612	-50	0	5prime_fragment	FALSE	canonical	3	808	junction_1	80.4335474510204	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTCTGTGTC	2570	False	NA	NA	False	NA	NA	NA	55202104	55213746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093
tx.2705	chr12	+	2159	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	254	1229	254	-413	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	55277206	55309392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
tx.2706	chr12	-	1706	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	2	2508	2	-2508	multi-exon	FALSE	canonical	3	69	junction_13	62.3614203298973	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGCTTACTAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	55349781	55328283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
tx.2707	chr12	-	1522	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	300	2513	-36	-2513	3prime_fragment	FALSE	canonical	3	216	junction_9	34.6025047262959	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATCTTGCTTACTAG	NA	False	NA	-106	True	NA	NA	NA	55349483	55328288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
tx.2708	chr12	-	1685	14	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-2	-2515	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	69.7240545793362	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAATATCTTGCTTACT	NA	False	NA	NA	False	NA	NA	NA	55349785	55328290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349717
tx.2709	chr12	+	2500	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	619	3	-5	-3	multi-exon	FALSE	canonical	3	113	junction_3	136.205726751851	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTTTAGTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	55350040	55429278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
tx.2710	chr12	+	552	3	ISM	ENSMUSG00000021023.15	ENSMUST00000183654.2	943	7	73859	19	73859	-2	3prime_fragment	FALSE	canonical	3	389	junction_1	18	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTAGTTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	55423929	55429279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_55424048_55426066_55426263_55429041
tx.2711	chr12	+	983	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	59	0	39	0	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	1671	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGTGCATCCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	55445618	55465239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
tx.2712	chr12	-	1526	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	50	2	50	-2	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCATTGTCCCGCTCGTTT	NA	False	NA	NA	False	NA	NA	NA	55539382	55536196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
tx.2713	chr12	+	2582	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	27	0	-19	0	multi-exon	FALSE	canonical	3	160	junction_3	20.0277585143997	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTTGTGTGTTAC	NA	False	NA	NA	False	NA	NA	NA	55883135	55916521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
tx.2714	chr12	-	1466	9	NNC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	-29	-13	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_1	75.0598719356755	50	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATAAACTTTTTCATG	NA	False	NA	NA	False	NA	NA	NA	56392649	56375100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_56375582_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
tx.2715	chr12	-	1469	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	30	13	-29	-13	multi-exon	FALSE	canonical	3	215	junction_1	38.7193427113633	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATAAACTTTTTCATG	NA	False	NA	NA	False	NA	NA	NA	56392649	56375100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
tx.2716	chr12	+	2138	11	FSM	ENSMUSG00000047022.19	ENSMUST00000123498.8	2117	11	-21	0	-2	0	multi-exon	FALSE	canonical	3	41	junction_10	14.6659469520382	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTGGTATTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	57277210	57543985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
tx.2717	chr12	+	1171	5	FSM	ENSMUSG00000047022.19	ENSMUST00000148418.8	1168	5	-2	-1	0	1	multi-exon	FALSE	canonical	3	68	junction_4	7.69740215917033	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTATGTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	57277219	57372862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309
tx.2718	chr12	+	2135	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	31	-446	31	446	multi-exon	FALSE	canonical	3	317	junction_1	0	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTTATTTTGACTTC	NA	False	NA	NA	False	NA	NA	NA	57277228	57287114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_57277398_57285148
tx.2719	chr12	-	3690	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	63	356	63	-356	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTGCTTTTTTTGTTT	2741	False	NA	NA	False	NA	NA	NA	59058740	59005524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
tx.2720	chr12	+	1457	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	37	junction_1	268.457781125662	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATACAGATGAAATGGC	NA	False	NA	NA	False	NA	NA	NA	59060183	59075185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_59060345_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
tx.2721	chr12	+	2102	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-2	581	combination_of_known_splicesites	FALSE	canonical	1	10	junction_6	288.756818101322	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTTCCATCCTTACTA	NA	False	NA	NA	False	NA	NA	NA	59060176	59075837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59071788_59071900_59073640_59073700_59074522
tx.2722	chr12	+	1419	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	31	138	-30	-67	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	390	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTATGGAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	59060209	59075118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
tx.2723	chr12	-	1216	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	1	38	1	-2	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	147	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTGAAAGTTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	59108246	59089915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
tx.2724	chr12	+	3308	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	35	142	-3	-142	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTTTAAAATTAGTACT	NA	False	NA	NA	False	NA	NA	NA	59113704	59120642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
tx.2725	chr12	+	2776	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	251	1407	35	0	multi-exon	FALSE	canonical	3	371	junction_5	45.1017752679996	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	NA	False	NA	NA	NA	59178322	59236962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
tx.2726	chr12	+	1999	2	ISM	ENSMUSG00000047227.6	ENSMUST00000220928.2	598	3	767	-1430	767	1430	3prime_fragment	FALSE	canonical	3	30	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTCTCCCAGCTTCTGT	975	False	NA	NA	False	NA	NA	NA	64970279	64972796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_64970416_64970933
tx.2727	chr12	-	2024	5	FSM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	19	4416	-2	-37	multi-exon	FALSE	canonical	3	14	junction_1	2.9474565306379	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGACCTAAGCAATTAA	NA	False	NA	NA	False	NA	NA	NA	65012289	64990022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65004512_65012182
tx.2728	chr12	+	2836	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	3	1230	2	0	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7510	False	NA	NA	False	NA	NA	NA	65083109	65108930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
tx.2729	chr12	-	954	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	60	8	15	4	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	5411	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTATTTATTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	65120721	65109205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
tx.273	chr1	+	1650	7	NIC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	82702635	82730111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
tx.2730	chr12	+	889	4	NNC	ENSMUSG00000055884.9	novel	1682	7	NA	NA	-15	-6654	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	59.9462722406953	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGATTAAAAAGCAAAAGGA	9265	False	NA	NA	False	NA	NA	NA	65122361	65134204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134156
tx.2731	chr12	+	971	3	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	49277	1409	25	83	3prime_fragment	FALSE	canonical	3	130	junction_1	12.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGGTCAGAGTGATTT	NA	False	NA	NA	False	NA	NA	NA	65171656	65177423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_65171961_65173288_65173581_65177048
tx.2732	chr12	-	3419	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGGGTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	65219380	65179505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
tx.2733	chr12	-	972	6	FSM	ENSMUSG00000047534.18	ENSMUST00000221296.2	969	6	10	-13	9	13	multi-exon	FALSE	canonical	3	78	junction_5	123.279195325083	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAGAAGATAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	65219363	65199533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
tx.2734	chr12	-	1597	7	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	-9	20027	9	12	5prime_fragment	FALSE	canonical	3	216	junction_5	67.8298524905435	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGCAGAAGATAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	65219363	65199534	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
tx.2735	chr12	+	2007	2	FSM	ENSMUSG00000035560.6	ENSMUST00000046331.5	2228	2	222	-1	18	1	multi-exon	FALSE	canonical	3	6	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGACCTCTTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	65272512	65275229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_65274272_65274981
tx.2736	chr12	-	360	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	30	0	30	0	multi-exon	FALSE	canonical	3	25458	junction_2	210	924	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGTGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	69205930	69204495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_69204596_69205434_69205535_69205770
tx.2737	chr12	+	1493	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	7	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.6276108929747	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATGTCTCAGCAGTTA	NA	False	NA	NA	False	NA	NA	NA	69215594	69225783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
tx.2738	chr12	+	771	3	FSM	ENSMUSG00000034883.10	ENSMUST00000222520.2	767	3	0	-4	0	0	multi-exon	FALSE	canonical	3	25	junction_2	59	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATGTCTCAGCAGTTA	NA	False	NA	NA	False	NA	NA	NA	69215594	69225783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_69215837_69218635_69218735_69225353
tx.2739	chr12	+	934	4	NNC	ENSMUSG00000034883.10	novel	1500	4	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	59.1119465270957	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCAATGTCTCAGCAG	NA	False	NA	NA	False	NA	NA	NA	69215597	69225780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_69215837_69218635_69218735_69221718_69221888_69225353
tx.2740	chr12	-	490	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	39	-3	-31	0	multi-exon	FALSE	canonical	3	5332	junction_1	0	7320	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTGTTTTGATT	NA	False	NA	NA	False	NA	NA	NA	69230818	69229511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_69229940_69230756
tx.2741	chr12	-	2086	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	1291	13	1291	-13	multi-exon	FALSE	canonical	3	240	junction_2	19	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGAGTTAACGTTTGT	NA	False	NA	NA	False	NA	NA	NA	69243912	69235873	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_69237169_69239581_69239726_69243265
tx.2742	chr12	-	1706	19	FSM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	0	0	0	0	multi-exon	TRUE	canonical	3	369	junction_1	34.9372011570955	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACACATTGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	69274969	69248546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
tx.2743	chr12	-	2203	6	NIC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	0	-2528	intron_retention	FALSE	canonical	3	405	junction_1	39.1121464509428	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAAGTTAAGTTTGACG	NA	False	NA	NA	False	NA	NA	NA	69274969	69260404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
tx.2744	chr12	+	2523	13	Fusion	ENSMUSG00000051890.14_ENSMUSG00000113190.2	novel	523	2	NA	NA	-7	7	multi-exon	FALSE	canonical	0	0	junction_1	4.30116263352131	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATTTTAAATTTTTC	NA	False	NA	NA	False	NA	NA	NA	69274692	69331413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr12_+_69274771_69297526_69297598_69298144_69298263_69298701_69298821_69300465_69300545_69302948_69303033_69304796_69304881_69305342_69305402_69306274_69306388_69309922_69309996_69315015_69315101_69316599_69316653_69329906
tx.2745	chr12	+	290	2	FSM	ENSMUSG00000051890.14	ENSMUST00000127791.2	228	2	-61	-1	21	1	multi-exon	FALSE	canonical	3	3	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTCCGAGTGGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	69288626	69289417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_69288788_69289288
tx.2746	chr12	+	1521	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	162	222	129	-222	multi-exon	TRUE	canonical	3	493	junction_10	56.6727937863977	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGTCTATTGTTAAAG	NA	False	NA	NA	False	NA	NA	NA	69343657	69357239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
tx.2747	chr12	-	3715	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	-2	1019	-2	27	multi-exon	TRUE	canonical	3	259	junction_6	33.0300526036517	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCCGTGTATTCATA	NA	False	NA	NA	False	NA	NA	NA	69403941	69358314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
tx.2748	chr12	-	1564	11	FSM	ENSMUSG00000020982.10	ENSMUST00000221794.2	2843	11	1304	-25	1304	25	multi-exon	FALSE	canonical	3	259	junction_6	43.3313973926528	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTTTCCGTGTATTCA	3369	False	NA	NA	False	NA	NA	NA	69369122	69358316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874
tx.2749	chr12	-	1844	15	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	29492	1021	-4021	25	3prime_fragment	FALSE	canonical	3	259	junction_6	40.3227413426686	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTTTCCGTGTATTCA	NA	False	NA	NA	False	NA	NA	NA	69374447	69358316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407
tx.2750	chr12	-	1397	14	ISM	ENSMUSG00000020982.10	ENSMUST00000220674.2	2370	20	-36	16490	-13	-3	5prime_fragment	FALSE	canonical	3	286	junction_8	27.062496156579	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAGCAGCTGCAGA	NA	False	NA	NA	False	NA	NA	NA	69403952	69387754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
tx.2751	chr12	-	1013	6	FSM	ENSMUSG00000049882.11	ENSMUST00000238784.2	875	6	85	-223	-8	0	multi-exon	FALSE	canonical	3	55	junction_4	48.4710222710435	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAAGCAGCATGGTTGG	NA	False	NA	NA	False	NA	NA	NA	69629799	69624401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
tx.2752	chr12	-	3330	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	9	1	9	-1	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	125	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTGTTATGATCATAT	NA	False	NA	NA	False	NA	NA	NA	69771638	69737207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
tx.2753	chr12	-	3130	8	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	181.049998731887	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGTGTTATGATCAT	NA	False	NA	NA	False	NA	NA	NA	69771638	69737209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69759395_69759528_69768085_69768238_69768851_69768968_69771427
tx.2754	chr12	+	1395	4	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	90.3487071788462	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCTAGTCTTTACTT	NA	False	NA	NA	False	NA	NA	NA	69771716	69791434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_69771789_69787672_69787882_69788418_69788591_69790492
tx.2755	chr12	+	1501	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	-14	-2	-2	0	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCTAGTCTTTACTT	NA	False	NA	NA	False	NA	NA	NA	69771721	69791434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
tx.2756	chr12	+	1597	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	2	0	2	0	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCTAGTCTTTACTT	NA	False	NA	NA	False	NA	NA	NA	69771725	69791434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
tx.2757	chr12	+	1608	6	NNC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.5849231952887	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTAGTCTTTACTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	69771732	69791439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_69771789_69772215_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
tx.2758	chr12	+	1210	5	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	5	-804	intron_retention	FALSE	canonical	3	110	junction_1	42.1270400099509	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGATCATTTGAAATTG	NA	False	NA	NA	False	NA	NA	NA	69771746	69790628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
tx.2759	chr12	-	4097	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	200	2	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAGTATTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	69939583	69850530	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
tx.2760	chr12	+	2337	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	42	416	42	-416	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTTGAAGAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	70499910	70514398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
tx.2761	chr12	+	4696	14	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6862522431374	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	729	False	NA	NA	False	NA	NA	NA	70872229	70949008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
tx.2762	chr12	+	1940	5	FSM	ENSMUSG00000021076.7	ENSMUST00000222291.2	615	5	-59	-1266	27	1266	multi-exon	FALSE	canonical	3	306	junction_4	20.5836707124847	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTTGTACTCAATGT	9672	False	NA	NA	False	NA	NA	NA	70984657	70995752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225
tx.2763	chr12	+	1475	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	32	2515	-26	142	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	426	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGTCGTAT	9677	False	NA	NA	False	NA	NA	NA	70984662	71008977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
tx.2764	chr12	+	1230	10	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	5576	2437	3088	220	3prime_fragment	FALSE	canonical	3	306	junction_1	26.5236907846458	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATTTTATTAGTTTATT	214	False	NA	NA	False	NA	NA	NA	70990206	71009055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
tx.2765	chr12	+	953	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	53	1840	3	2	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	3291	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGTAATTGAAGCTAT	4773	False	NA	NA	False	NA	NA	NA	71021447	71041281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
tx.2766	chr12	-	942	3	FSM	ENSMUSG00000085622.10	ENSMUST00000136690.3	1063	3	215	-94	-21	94	multi-exon	FALSE	canonical	3	10	junction_2	2	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTTTTCTCCTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	71062391	71056474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_71057254_71061229_71061282_71062280
tx.2767	chr12	+	1525	15	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	-47	35418	-47	-4087	5prime_fragment	FALSE	canonical	3	75	junction_5	9.00141712199149	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAAAAAGACTTTGA	3334	False	NA	NA	False	NA	NA	NA	71062716	71109948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866
tx.2768	chr12	+	2770	13	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	333	80282	333	8134	5prime_fragment	FALSE	canonical	3	118	junction_6	8.91471941354422	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGGCCTCTTAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	71183954	71209795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349
tx.2769	chr12	-	1810	5	FSM	ENSMUSG00000019718.9	ENSMUST00000019862.3	1831	5	22	-1	22	1	multi-exon	FALSE	canonical	3	12	junction_4	3.20156211871642	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGAGTCAACTTCTT	NA	False	NA	NA	False	NA	NA	NA	72132191	72120200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_72120811_72123917_72124056_72124137_72124261_72126260_72126431_72131422
tx.277	chr1	+	1959	6	FSM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	288	-17	-50	17	multi-exon	FALSE	canonical	3	192	junction_3	14.9853261559434	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCTGACTTTGGCCCT	NA	False	NA	NA	False	NA	NA	NA	85822289	85836413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
tx.2770	chr12	+	1232	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	56	4	56	0	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	386	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCCCGAAAAG	NA	False	NA	NA	False	NA	NA	NA	72132686	72147631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
tx.2771	chr12	+	1210	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	60	604	60	0	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCCCGAAAAG	NA	False	NA	NA	False	NA	NA	NA	72132690	72147631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
tx.2772	chr12	-	1522	7	FSM	ENSMUSG00000021087.19	ENSMUST00000021497.16	1544	7	23	-1	-15	0	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTCTCTCTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	72283475	72258525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
tx.2773	chr12	+	1043	2	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	-26	37885	-26	-37885	5prime_fragment	FALSE	canonical	3	96	junction_1	0	66	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGAGAGTTAGGTTATTT	NA	False	NA	NA	False	NA	NA	NA	72583130	72589008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_72583314_72588148
tx.2774	chr12	+	780	3	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-19	-38256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGGCTAGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	72583137	72588637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_72583314_72583535_72583651_72588148
tx.2775	chr12	-	1276	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	107	2	4	-2	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAGACTGCAGACTTA	NA	False	NA	NA	False	NA	NA	NA	72711576	72697128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
tx.2776	chr12	+	1436	5	ISM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	23024	5259	532	-4	3prime_fragment	FALSE	canonical	3	299	junction_2	42.9498253779919	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGTAATCATGTATGCG	NA	False	NA	NA	False	NA	NA	NA	72831008	72841334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
tx.2777	chr12	+	1042	2	ISM	ENSMUSG00000021096.12	ENSMUST00000222896.2	1103	3	532	6451	532	-1989	5prime_fragment	FALSE	canonical	3	418	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCAATGCATTTAAGT	NA	False	NA	NA	False	NA	NA	NA	72831008	72834185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_72831311_72833445
tx.2778	chr12	+	1516	4	ISM	ENSMUSG00000021096.12	ENSMUST00000221628.2	1486	6	29215	-376	256	376	3prime_fragment	FALSE	canonical	3	299	junction_1	26.106618998935	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTGTTGGCCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	72833443	72841714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_72833564_72837406_72837516_72839551_72839610_72840485
tx.2779	chr12	-	2011	5	ISM	ENSMUSG00000021098.15	ENSMUST00000131033.8	1939	8	-78	5421	-29	4	5prime_fragment	FALSE	canonical	3	10	junction_4	10.280442597476	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTATTTTGCCTACAT	NA	False	NA	NA	False	NA	NA	NA	72964709	72958428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964559
tx.278	chr1	+	3235	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	22	-145	0	145	multi-exon	FALSE	canonical	3	1352	junction_6	102.249660417801	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTAGTTGATTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	85992362	86067018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
tx.2780	chr12	-	1882	4	NIC	ENSMUSG00000021098.15	novel	1939	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	9.42809041582063	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGGTATTTTGCCTAC	NA	False	NA	NA	False	NA	NA	NA	72964631	72958430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_72960049_72963447_72963505_72963596_72963654_72964481
tx.2781	chr12	-	2028	5	ISM	ENSMUSG00000021098.15	ENSMUST00000044000.12	2051	18	28	30550	-21	0	5prime_fragment	FALSE	canonical	3	18	junction_2	8.16624148553054	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGTATTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	72964652	72958432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964481
tx.2782	chr12	-	1795	4	NNC	ENSMUSG00000021098.15	novel	1970	6	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	12.4721912892465	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGTATTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	72964712	72958432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_72960049_72963447_72963505_72963596_72963654_72964647
tx.2783	chr12	-	1063	4	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-29	89	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	38.0029238641216	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATAGACTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	73333513	73327165	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_73327407_73329385_73329511_73331408_73332050_73333457
tx.2784	chr12	-	1709	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-30	387	-29	83	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATATTGTATAGACTG	NA	False	NA	NA	False	NA	NA	NA	73333513	73327171	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
tx.2785	chr12	+	1895	16	FSM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	44	1093	33	1091	multi-exon	FALSE	canonical	2	3	junction_10	3.76769897358528	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCAATGGCTGGACAGAA	NA	False	NA	NA	False	NA	NA	NA	73333596	73399730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
tx.2786	chr12	-	704	2	NNC	ENSMUSG00000087700.3	novel	818	3	NA	NA	-23	10656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGTAGGACTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	73996611	73962598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_73963089_73996397
tx.2787	chr12	-	624	2	NIC	ENSMUSG00000087700.3	novel	1451	7	NA	NA	-6	153	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTATTTAACATTTCCA	NA	False	NA	NA	False	NA	NA	NA	73996594	73973101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_73973529_73996397
tx.2788	chr12	+	1727	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-29	4577	16	282	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTAGTGTGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	74011270	74031163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
tx.2789	chr12	-	485	3	NNC	ENSMUSG00000113031.2	novel	636	3	NA	NA	71	290	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGTCACTTTTGAGGATG	NA	False	NA	NA	False	NA	NA	NA	74363865	74360684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_74360913_74362065_74362187_74363729
tx.279	chr1	+	1565	12	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	25371	-145	-20827	145	3prime_fragment	FALSE	canonical	3	1395	junction_4	94.4650007337975	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTAGTTGATTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	86017711	86067018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
tx.2790	chr12	-	2647	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	10	322	0	-322	multi-exon	FALSE	canonical	3	148	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTGTTCTTTTAAA	6420	False	NA	NA	False	NA	NA	NA	75716301	75677691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_75680283_75716245
tx.2791	chr12	-	1128	5	NNC	ENSMUSG00000021056.9	novel	1980	9	NA	NA	12566	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	12.3490890352285	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGGTTTGAACTACTGA	1212	False	NA	NA	False	NA	NA	NA	76263672	76250755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_76251085_76253561_76253769_76259148_76259332_76261186_76261493_76263569
tx.2792	chr12	+	3156	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	85	0	-30	0	multi-exon	TRUE	canonical	3	837	junction_20	135.484134190258	229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	7996	False	NA	NA	False	NA	NA	NA	76302156	76366577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
tx.2793	chr12	+	2534	22	ISM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	27498	-1	-10154	0	3prime_fragment	FALSE	canonical	3	837	junction_14	149.554940647606	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	406	False	NA	NA	False	NA	NA	NA	76329684	76366577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
tx.2794	chr12	+	2367	21	ISM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	28572	-1	-9080	0	3prime_fragment	FALSE	canonical	3	837	junction_13	152.996928073736	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	1480	False	NA	NA	False	NA	NA	NA	76330758	76366577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
tx.2795	chr12	-	1628	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	91	-47	-47	2	multi-exon	FALSE	canonical	3	78	junction_2	3	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATGTAGAAACTTTAAG	NA	False	NA	NA	False	NA	NA	NA	76416285	76395671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_76397048_76402662_76402843_76416213
tx.2796	chr12	+	2711	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	0	-1856	0	1	multi-exon	FALSE	canonical	3	44	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTCAGTCGTGGTG	NA	False	NA	NA	False	NA	NA	NA	76491270	76497290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_76491440_76494748
tx.2797	chr12	+	614	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	13	49	-4	12	multi-exon	FALSE	canonical	3	492	junction_2	1.88561808316413	227	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAAATAGC	NA	False	NA	NA	False	NA	NA	NA	76812324	76829905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
tx.2798	chr12	+	2612	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	1	0	1	0	multi-exon	FALSE	canonical	3	246	junction_4	27.7548298231568	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	76884188	76968186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
tx.2799	chr12	+	1910	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7309	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	76948950	76968186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
tx.28	chr1	-	2751	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-155	-32	-155	32	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	13197542	13183648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
tx.2800	chr12	-	2724	4	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-34	0	intron_retention	FALSE	canonical	3	20	junction_1	20.7257220756131	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGTGTCTTCTTAAC	NA	False	NA	NA	False	NA	NA	NA	77009009	76984042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_76986289_76986740_76986865_76999942_77000051_77008763
tx.2801	chr12	-	1949	4	FSM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	-20	-3	-20	-2	multi-exon	FALSE	canonical	3	49	junction_1	8.28653526310404	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTAGTAGTGTCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	77008995	76984044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008763
tx.2802	chr12	-	2019	5	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5714979643834	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	77008981	76984045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008763
tx.2803	chr12	+	3218	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-209	349	43	0	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	77285629	77522763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
tx.2804	chr12	+	3087	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-61	265	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAATGCAGCCTCCAGT	NA	False	NA	NA	False	NA	NA	NA	78795619	78885120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
tx.2805	chr12	+	1612	11	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	2	-3607	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	13.4833230325465	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAAAAAGGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	78795682	78873065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034
tx.2806	chr12	-	1326	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	84	2257	-59	20	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	633	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTCTTTTTCTTTTT	53	False	NA	NA	False	NA	NA	NA	78908328	78889755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
tx.2807	chr12	+	1491	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	225	1689	-41	-1689	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	3201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGCTTCTTCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	78908817	78932095	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
tx.2808	chr12	-	1607	9	FSM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	-25	1	-25	-1	multi-exon	FALSE	canonical	3	37	junction_6	8.60868021243675	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTATGGTTCTTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	78953763	78935465	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
tx.2809	chr12	-	2338	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	1	0	1	0	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGACTTGTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	79136424	79127437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
tx.2810	chr12	-	1049	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	200	241	-19	71	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	296	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACATGTATAACATTAAT	NA	False	NA	NA	False	NA	NA	NA	79219241	79203031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
tx.2811	chr12	-	2836	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	428	-2	-72	2	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGGGGATATTGGAAA	NA	False	NA	NA	False	NA	NA	NA	79238639	79221108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
tx.2812	chr12	+	1743	7	FSM	ENSMUSG00000021123.13	ENSMUST00000021548.12	1678	7	-66	1	-66	0	multi-exon	FALSE	canonical	2	3	junction_5	2.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGGTGTCTTTTCTCA	309	False	NA	NA	False	NA	NA	NA	79255621	79269438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_79255883_79257614_79257734_79258161_79258318_79259426_79259532_79260317_79260528_79265449_79265640_79268736
tx.2813	chr12	+	883	7	NNC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	-31	-181250	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	21.6365174852352	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCCCTTTTCCTTCTT	8682	False	NA	NA	False	NA	NA	NA	79344093	79374180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_79344197_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994
tx.2814	chr12	+	829	7	ISM	ENSMUSG00000059060.16	ENSMUST00000079533.12	1759	8	-16	181250	-16	-181250	5prime_fragment	FALSE	canonical	3	33	junction_1	14.6021307425397	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCCCTTTTCCTTCTT	8697	False	NA	NA	False	NA	NA	NA	79344108	79374180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_79344158_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994
tx.2816	chr12	+	2265	2	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	80057307	80062765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_+_80057457_80060649
tx.2817	chr12	-	2988	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	2	0	2	0	multi-exon	FALSE	canonical	3	257	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTCTATAGGTTTTT	9169	False	NA	NA	False	NA	NA	NA	80159785	80154527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_80157323_80159592
tx.2818	chr12	+	3209	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	101	0	-24	0	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2764	False	NA	NA	False	NA	NA	NA	80509969	80544896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
tx.2819	chr12	+	1463	2	FSM	ENSMUSG00000032705.10	ENSMUST00000219757.2	5245	2	1677	2105	1677	0	multi-exon	FALSE	canonical	3	232	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	NA	False	NA	NA	False	NA	NA	NA	80539551	80544896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_80539673_80543554
tx.2820	chr12	-	793	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	489	11	-4	-11	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	4332	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCACTGAGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	80690626	80680806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
tx.2821	chr12	+	3190	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-19	2030	-6	1432	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTGTATTTATATTTT	NA	False	NA	NA	False	NA	NA	NA	80690993	80728081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
tx.2822	chr12	+	2296	2	FSM	ENSMUSG00000066438.7	ENSMUST00000153762.2	956	2	-34	-1306	-34	2	multi-exon	FALSE	canonical	3	14	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTTTCCTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	80768471	80770990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_80768870_80769092
tx.2823	chr12	+	1493	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	30	4	0	0	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	2766	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	80992307	80997277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
tx.2824	chr12	+	1619	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	-51	0	0	0	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	1043	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	80992307	80997277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
tx.2825	chr12	+	3195	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7401	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2909728420852	16	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGGTGCCTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	81066180	81233185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
tx.2826	chr12	+	2029	2	ISM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	157047	0	157047	0	3prime_fragment	FALSE	canonical	3	175	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTGGTGCCTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	81230648	81233184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_81230816_81231322
tx.2827	chr12	-	605	4	FSM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	13	1389	3	0	multi-exon	FALSE	canonical	3	142	junction_1	95.530099968544	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGCTTTTCAGTCT	1001	False	NA	NA	False	NA	NA	NA	81531881	81518866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81531670
tx.2828	chr12	-	798	6	FSM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	-4	1490	-4	-1490	multi-exon	FALSE	canonical	3	129	junction_3	88.6715286887511	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGCTTTTCAGTCT	NA	False	NA	NA	False	NA	NA	NA	81579660	81518866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
tx.2829	chr12	-	1029	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	25	3601	-6	254	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTCTTTCTTTCGTTT	NA	False	NA	NA	False	NA	NA	NA	81579660	81548315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
tx.2830	chr12	-	1033	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	19	7	19	1	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	289	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCATGCCTTTCCCTTG	NA	False	NA	NA	False	NA	NA	NA	81641761	81620337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
tx.2831	chr12	+	2002	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	80	-74	80	69	multi-exon	TRUE	canonical	3	216	junction_9	23.528907060372	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGTATGTACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	83567319	83588763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
tx.2832	chr12	+	1985	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-74	69	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	62.8602281575852	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGTATGTACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	83567333	83588763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
tx.2833	chr12	+	1088	10	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	-10	19112	-10	12	5prime_fragment	FALSE	canonical	3	212	junction_1	85.0034131486117	42	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGACAGGAAATTGAGAA	3971	False	NA	NA	False	NA	NA	NA	83679015	83710785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752
tx.2834	chr12	+	1150	11	NIC	ENSMUSG00000010608.16	novel	1116	11	NA	NA	-8	12	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	131.960600180508	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGACAGGAAATTGAGAA	3973	False	NA	NA	False	NA	NA	NA	83679017	83710785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752
tx.2835	chr12	+	2675	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	15	0	-5	0	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTCTGTCCTGGCTGG	3360	False	NA	NA	False	NA	NA	NA	83734940	83781869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
tx.2836	chr12	+	2343	9	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	23739	104	-12337	0	3prime_fragment	FALSE	canonical	3	287	junction_6	22.6163657557973	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTCTGTCCTGGCTGG	NA	False	NA	NA	False	NA	NA	NA	83759075	83781869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
tx.2837	chr12	-	3556	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGCTTTTGCCCATGAA	NA	False	NA	NA	False	NA	NA	NA	83968662	83840849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
tx.2838	chr12	+	723	8	FSM	ENSMUSG00000042523.13	ENSMUST00000123491.8	5727	8	-38	5042	-38	18	multi-exon	FALSE	canonical	2	7	junction_1	4.44007721940573	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTGGAGCAGAGTTC	9874	False	NA	NA	False	NA	NA	NA	84161101	84185249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84161174_84168056_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84185127
tx.2839	chr12	+	1313	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	133	1722	0	8	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTAGTGTGATAATAT	NA	False	NA	NA	False	NA	NA	NA	84332138	84360884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
tx.284	chr1	-	304	2	FSM	ENSMUSG00000026234.13	ENSMUST00000188682.2	601	2	303	-6	303	5	multi-exon	FALSE	canonical	3	7412	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTAATACTTCCTAGAGG	NA	False	NA	NA	False	NA	NA	NA	86278630	86278211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_86278419_86278533
tx.2840	chr12	+	1338	5	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	20564	-4	20557	4	3prime_fragment	FALSE	canonical	3	217	junction_3	19.0328663106743	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAGAAGCAGTTAACATT	NA	False	NA	NA	False	NA	NA	NA	84352743	84361632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
tx.2841	chr12	+	2335	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	263	-1	0	1	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1846	False	NA	NA	False	NA	NA	NA	84363888	84390498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
tx.2842	chr12	+	1531	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	67	4	-4	0	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	451	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTCTTTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	84408808	84420566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
tx.2843	chr12	-	2160	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	11	2801	-4	1	multi-exon	TRUE	canonical	3	43	junction_8	4.47014789713072	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCCTCAGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	84455792	84423449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
tx.2844	chr12	-	3401	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	-2	0	-1	0	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	84497779	84477490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
tx.2845	chr12	+	2147	6	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	75	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	52.6399088145107	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGCCCAGGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	84498270	84578345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509181_84576463
tx.2846	chr12	+	2184	6	FSM	ENSMUSG00000085793.4	ENSMUST00000137170.4	2270	6	84	2	84	-2	multi-exon	FALSE	canonical	3	123	junction_1	15.7810012356631	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGCCCAGGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	84498279	84578345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
tx.2847	chr12	-	2207	16	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	3215	-122	1232	2	3prime_fragment	FALSE	canonical	3	177	junction_14	24.1887025971492	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	84660929	84649304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678
tx.2848	chr12	-	2446	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-15	-122	-15	2	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	84664159	84649304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
tx.2849	chr12	-	1159	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	211	1929	-27	1	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	2779	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGGTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84819715	84803264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
tx.285	chr1	-	2405	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	26	5771	-10	5	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTAATACTTCCTAGAGG	NA	False	NA	NA	False	NA	NA	NA	86287096	86278211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
tx.2850	chr12	+	746	3	FSM	ENSMUSG00000021241.8	ENSMUST00000222022.2	485	3	-50	-211	-2	0	multi-exon	FALSE	canonical	3	134	junction_2	92.5	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820048	84821862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84820146_84820348_84820452_84821316
tx.2851	chr12	+	1608	2	FSM	ENSMUSG00000021241.8	ENSMUST00000223089.2	843	2	-13	-752	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820051	84821862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84820146_84820348
tx.2852	chr12	+	859	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	27	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_3	133.217449641137	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820051	84821862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
tx.2853	chr12	+	974	3	NIC	ENSMUSG00000021241.8	novel	883	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	159.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	84820051	84821862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_84820146_84820348_84820683_84821316
tx.2854	chr12	+	715	8	FSM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	32	2	32	-2	multi-exon	FALSE	canonical	3	1900	junction_1	151.77601649692	560	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGTTGTCTCAATTCT	4661	False	NA	NA	False	NA	NA	NA	85017702	85030075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
tx.2855	chr12	+	2718	2	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	6	19994	2	17	5prime_fragment	FALSE	canonical	3	359	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAACATAAATAATA	NA	False	NA	NA	False	NA	NA	NA	85157612	85160868	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_85157734_85158271
tx.2856	chr12	+	2741	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	25	-2	0	0	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGGATCTGTGCTCCT	NA	False	NA	NA	False	NA	NA	NA	85157631	85180864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
tx.2857	chr12	-	1826	6	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10801	389	-474	2	3prime_fragment	FALSE	canonical	3	114	junction_5	16.4073154415949	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGCAGTCAGTTCTTCT	617	False	NA	NA	False	NA	NA	NA	85187237	85182411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
tx.2858	chr12	+	1457	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	14	134	-9	1	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTCGTTTATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	85266268	85273268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
tx.2859	chr12	-	1873	2	ISM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	0	32283	0	-32283	5prime_fragment	FALSE	canonical	3	64	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAGAAGGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	85317373	85314436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_85316249_85317312
tx.286	chr1	+	1208	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	-4	12	-4	-12	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	7362	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	NA	False	NA	NA	NA	86454443	86458422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
tx.2860	chr12	-	625	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	17	6	0	5	multi-exon	FALSE	canonical	3	386	junction_2	28.5	221	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTACATTGCTTCCCCCC	4308	False	NA	NA	False	NA	NA	NA	85327192	85319177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_85319602_85326764_85326857_85327083
tx.2861	chr12	-	2989	4	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	33019	0	33019	0	3prime_fragment	FALSE	canonical	3	92	junction_1	15.9652400197707	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	85353117	85346287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910
tx.2862	chr12	-	1341	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	145	-4	-12	4	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	975	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTGTATGTGTGTTT	8609	False	NA	NA	False	NA	NA	NA	85421476	85389557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
tx.2863	chr12	+	441	2	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTCTTAGCTCCATCA	NA	False	NA	NA	False	NA	NA	NA	85571428	85572156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_+_85571668_85571954
tx.2864	chr12	+	3428	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	7	0	7	0	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTCATCATTTAGTG	NA	False	NA	NA	False	NA	NA	NA	85793319	85860359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
tx.2865	chr12	-	1198	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-28	-1	0	1	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	649	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTGTGTACTTTGGCC	NA	False	NA	NA	False	NA	NA	NA	85871324	85862220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
tx.2866	chr12	+	1183	5	ISM	ENSMUSG00000012609.20	ENSMUST00000176008.8	5482	10	-275	24373	-4	1	5prime_fragment	FALSE	canonical	3	30	junction_4	10.1334840997556	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAATATGGTACATTT	NA	False	NA	NA	False	NA	NA	NA	85871476	85892457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020
tx.2867	chr12	+	809	9	FSM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	-26	0	-2	0	multi-exon	FALSE	canonical	3	179	junction_5	10.7637992827812	109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	86129334	86209233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
tx.2868	chr12	+	1714	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	0	2115	0	-2115	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTAGAGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	86288648	86336029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
tx.2869	chr12	+	2161	6	ISM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	18	25074	18	2957	5prime_fragment	FALSE	canonical	3	56	junction_1	5.62138772902208	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTGTTTTAAATAGT	NA	False	NA	NA	False	NA	NA	NA	86288666	86313070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955
tx.287	chr1	-	1127	5	FSM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	11	21	11	7	multi-exon	FALSE	canonical	3	312	junction_1	25.5391855782443	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGATGCTTCCATCTCCT	NA	False	NA	NA	False	NA	NA	NA	86510258	86470736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475250_86475340_86510021
tx.2870	chr12	+	2374	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	22	1959	5	-1545	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTTGATGCTACTTTGT	NA	False	NA	NA	False	NA	NA	NA	86288653	86336599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
tx.2871	chr12	-	849	4	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	7.78888096369861	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTCCAGGTCACTGA	NA	False	NA	NA	False	NA	NA	NA	86516827	86471839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr12_-_86472015_86476368_86476447_86508048_86508306_86516488
tx.2872	chr12	+	3902	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	-1	-2557	-1	-3	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	NA	False	NA	NA	NA	86516889	86568396	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
tx.2873	chr12	+	4085	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	11	2	11	-2	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTTGGTCTATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	86994127	87012134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
tx.2874	chr12	-	2669	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	435	1960	7	-17	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATATTCTCTGGTATCT	6084	False	NA	NA	False	NA	NA	NA	87194241	87155594	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
tx.2875	chr12	+	1667	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	NA	False	NA	NA	NA	87194480	87211497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
tx.2876	chr12	+	1587	9	FSM	ENSMUSG00000021033.12	ENSMUST00000222222.2	724	9	-15	-848	-15	-10	multi-exon	FALSE	canonical	3	69	junction_1	142.509429512576	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTTAAGTTGCTTTTG	3832	False	NA	NA	False	NA	NA	NA	87204366	87211487	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_87204435_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
tx.2877	chr12	-	788	4	NNC	ENSMUSG00000072919.5	novel	1101	6	NA	NA	8439	18	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_2	15.7973274814304	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTCTCCTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	87271891	87267795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_87268219_87269818_87269953_87270931_87271084_87271812
tx.2878	chr12	-	902	4	NNC	ENSMUSG00000072919.5	novel	1101	6	NA	NA	8409	13	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	1.69967317119759	26	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTGATTCTCCTATT	NA	False	NA	NA	False	NA	NA	NA	87271921	87267800	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_87268219_87269818_87270042_87270931_87271084_87271812
tx.2879	chr12	-	2542	20	FSM	ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	-19	1	-19	-1	multi-exon	FALSE	canonical	3	87	junction_1	8.24352343784865	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTTCCCCATCTGGTT	NA	False	NA	NA	False	NA	NA	NA	87313049	87285647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
tx.288	chr1	+	1964	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	31	236	0	-62	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTCAATATTTGTT	NA	False	NA	NA	False	NA	NA	NA	86514852	86533986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
tx.2880	chr12	+	1396	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	-2	-17	-2	-2	multi-exon	TRUE	canonical	3	2699	junction_7	143.152890295656	1784	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGACTGACAGCCTTG	NA	False	NA	NA	False	NA	NA	NA	87313469	87320770	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
tx.2881	chr12	-	2576	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-54	4	-54	-4	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTTTGATAAAGGATTT	7615	False	NA	NA	False	NA	NA	NA	87346533	87325415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
tx.2882	chr12	-	997	2	ISM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-69	7704	-69	-3922	5prime_fragment	FALSE	canonical	3	97	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	7600	False	NA	NA	False	NA	NA	NA	87346548	87333115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_87333912_87346347
tx.2883	chr12	-	892	5	ISM	ENSMUSG00000021036.11	ENSMUST00000169845.8	3769	6	2199	1565	2199	4	3prime_fragment	FALSE	canonical	3	499	junction_2	42.1092329543059	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTACTTGTGAAATCA	NA	False	NA	NA	False	NA	NA	NA	87388423	87356408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310
tx.2884	chr12	-	2045	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	88	4577	-26	4	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTACTTGTGAAATCA	8784	False	NA	NA	False	NA	NA	NA	87435041	87356408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
tx.2885	chr12	-	1968	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	-5	1894	-5	14	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGGTTGGTGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	87490614	87474832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
tx.2886	chr12	-	2549	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	-18	-512	-5	512	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTATTTTTCTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	87490614	87474334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
tx.2887	chr12	-	1899	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162247.8	1883	6	-16	0	-5	0	multi-exon	FALSE	canonical	3	134	junction_2	71.1983145867934	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	NA	False	NA	NA	NA	87490614	87474846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87490411
tx.2888	chr12	+	397	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	16	2288	0	-2	multi-exon	FALSE	canonical	3	3495	junction_2	126.36015546401	901	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	NA	False	NA	NA	NA	87490681	87496688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
tx.2889	chr12	-	2247	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	-19	4	-19	-4	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTCTGTTTATTTAG	NA	False	NA	NA	False	NA	NA	NA	87519063	87496683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
tx.289	chr1	-	711	3	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTTTGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	86559626	86554789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_86555346_86558732_86558793_86559531
tx.2890	chr12	-	963	10	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	-5	5768	-5	-5768	5prime_fragment	FALSE	canonical	3	814	junction_9	103.771234625991	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAGAAACATGAAGA	NA	False	NA	NA	False	NA	NA	NA	87519049	87502447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
tx.2891	chr12	+	1786	2	FSM	ENSMUSG00000079034.3	ENSMUST00000110152.3	1873	2	-1	88	-1	-88	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATTTTTTTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	87561084	87564948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_87561276_87563353
tx.2892	chr12	-	1863	2	Genic_Genomic	ENSMUSG00000095799.2	novel	435	1	NA	NA	-2771	928	multi-exon	FALSE	canonical	3	16	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATGCAGTTTGATGAT	NA	False	NA	NA	False	NA	NA	NA	88219641	88215507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr12_-_88217181_88219451
tx.2893	chr12	+	2175	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	-10	-7	-10	2	multi-exon	TRUE	canonical	3	29	junction_1	14.3544418212622	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTTCTCAATCATTGT	NA	False	NA	NA	False	NA	NA	NA	88327313	88428496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
tx.2894	chr12	+	2325	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	-71	-1	23	1	multi-exon	FALSE	canonical	3	17	junction_1	17.7822945651004	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGTTCCTTCTCAATC	NA	False	NA	NA	False	NA	NA	NA	88327346	88428491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
tx.2895	chr12	+	2273	11	NNC	ENSMUSG00000021044.16	novel	2199	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	27.9143332358127	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGACTGTTCCTTCTCA	NA	False	NA	NA	False	NA	NA	NA	88327563	88428488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_88327743_88335104_88335230_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
tx.2896	chr12	+	2051	12	FSM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	1	0	1	0	multi-exon	FALSE	canonical	3	39	junction_2	12.115149999242	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATATTTATTATTGC	NA	False	NA	NA	False	NA	NA	NA	98594416	98636074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
tx.2897	chr12	+	1946	11	FSM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	-30	-3	0	0	multi-exon	FALSE	canonical	3	21	junction_2	15.3766056072203	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATATTTATTATTGC	NA	False	NA	NA	False	NA	NA	NA	98594425	98636074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_98594594_98598221_98598297_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
tx.2898	chr12	+	2279	14	FSM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	-1	-6	-1	0	multi-exon	FALSE	canonical	3	15	junction_7	3.54347470962493	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACTTTTCACAAGTT	NA	False	NA	NA	False	NA	NA	NA	98886831	98949497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
tx.2899	chr12	+	1280	5	ISM	ENSMUSG00000021013.17	ENSMUST00000168255.8	638	6	197	-677	168	1	3prime_fragment	FALSE	canonical	3	21	junction_2	2.38484800354236	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCACTTTTCACAAGTTT	NA	False	NA	NA	False	NA	NA	NA	98940924	98949498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
tx.29	chr1	-	1896	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	40	1002	5	-1002	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGCTTTATTTTC	9696	False	NA	NA	False	NA	NA	NA	13660094	13635923	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
tx.290	chr1	-	735	2	Genic_Genomic	ENSMUSG00000084106.5	novel	891	1	NA	NA	-20	31	multi-exon	FALSE	canonical	2	41	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAACAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86837425	86836483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr1_-_86836834_86837040
tx.2900	chr12	-	2072	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	-2	-2	-2	2	multi-exon	TRUE	canonical	3	69	junction_2	7.87400787401181	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTTATGGTATGTATG	NA	False	NA	NA	False	NA	NA	NA	99849703	99683788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
tx.2901	chr12	-	373	3	FSM	ENSMUSG00000021176.7	ENSMUST00000221801.2	3131	3	61	2697	0	48	multi-exon	FALSE	canonical	3	83	junction_2	4.5	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTGGTATGTCATTAT	NA	False	NA	NA	False	NA	NA	NA	99849701	99844545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_99844662_99849020_99849117_99849540
tx.2902	chr12	+	1856	14	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	-7	25	combination_of_known_junctions	FALSE	canonical	3	48	junction_13	129.038226527357	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTCCACAGAGGTG	NA	False	NA	NA	False	NA	NA	NA	99850768	99885588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
tx.2903	chr12	+	2063	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-27	0	-7	0	multi-exon	FALSE	canonical	3	362	junction_1	45.8998910674089	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	False	NA	NA	False	NA	NA	NA	99850768	99921478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
tx.2904	chr12	+	1541	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	10	40	10	-40	multi-exon	FALSE	canonical	3	1446	junction_1	298.758363899657	1624	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGTAATGAGTACCATG	3983	False	NA	NA	False	NA	NA	NA	100076422	100089624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
tx.2905	chr12	-	1249	2	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTCAATTATTCTTTG	NA	False	NA	NA	False	NA	NA	NA	100147234	100145844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_-_100146935_100147075
tx.2906	chr12	+	1524	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	92	2499	-2	820	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	1257	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9257	False	NA	NA	False	NA	NA	NA	100165785	100173574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
tx.2907	chr12	+	1128	3	ISM	ENSMUSG00000113679.2	ENSMUST00000223300.2	4791	4	13681	3514	5	1	3prime_fragment	FALSE	canonical	2	9	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGAGCTCTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	100256548	100263653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_100256684_100261887_100261990_100262762
tx.2908	chr12	-	1617	3	ISM	ENSMUSG00000041846.16	ENSMUST00000222956.2	6009	5	6093	0	969	0	3prime_fragment	FALSE	canonical	3	499	junction_2	93	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	7300	False	NA	NA	False	NA	NA	NA	101008835	101005770	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_101007039_101008083_101008311_101008713
tx.2909	chr12	+	2314	2	NNC	ENSMUSG00000093579.2	novel	844	2	NA	NA	-540	316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTTTAGTCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	101878958	101881910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_101880216_101880853
tx.291	chr1	+	3138	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	18	238	-7	-238	multi-exon	FALSE	canonical	3	212	junction_6	847.519796556727	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCAGGCTGTGGACTTG	NA	False	NA	NA	False	NA	NA	NA	87141653	87167972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
tx.2910	chr12	-	2104	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	16	3243	13	937	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGGTTGACCCTTGC	NA	False	NA	NA	False	NA	NA	NA	101924489	101888402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
tx.2911	chr12	-	960	9	FSM	ENSMUSG00000021189.12	ENSMUST00000161011.8	1000	9	42	-2	42	0	multi-exon	FALSE	canonical	3	289	junction_2	19.5380238253514	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTCTGTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	101924460	101899182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
tx.2912	chr12	-	339	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	516	6	189	6	multi-exon	FALSE	canonical	3	1653	junction_2	166	617	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTGATTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	101941997	101934354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_101934470_101935751_101935897_101941918
tx.2913	chr12	+	3603	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-14	2143	-14	-2143	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTCTGAACTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	101942232	101970540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
tx.2914	chr12	-	1907	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	99	-16	99	2	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTGTGGTTTGTG	7588	False	NA	NA	False	NA	NA	NA	102405973	102360340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
tx.2915	chr12	+	2870	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	60	-103	3	101	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCATTTTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102435453	102464267	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
tx.2916	chr12	+	1925	8	FSM	ENSMUSG00000021194.7	ENSMUST00000021610.7	1883	8	-42	0	-42	0	multi-exon	TRUE	canonical	3	24	junction_1	6.51841974088562	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTTGATTTATTTTCG	NA	False	NA	NA	False	NA	NA	NA	102521185	102531287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_102521430_102522143_102522191_102524724_102524819_102525547_102525617_102527603_102527763_102527925_102528343_102528856_102529333_102530868
tx.2917	chr12	+	901	2	ISM	ENSMUSG00000021194.7	ENSMUST00000021610.7	1883	8	7622	1	4523	-1	3prime_fragment	FALSE	canonical	3	41	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTTGATTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	102528849	102531286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_102529333_102530868
tx.2918	chr12	-	2907	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	11	0	-5	0	multi-exon	TRUE	canonical	3	205	junction_5	27.4851250454756	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2418	False	NA	NA	False	NA	NA	NA	102671178	102534840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
tx.2919	chr12	-	1941	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	869	-15	869	15	multi-exon	FALSE	canonical	3	96	junction_1	0	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTGTAATACTACATTT	6359	False	NA	NA	False	NA	NA	NA	102724062	102707975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_102709654_102723799
tx.292	chr1	+	980	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	34	793	9	-1	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	557	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	87141669	87155785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
tx.2920	chr12	+	859	2	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	-43	-2155	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTTGCTTTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	102709977	102711665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_102710030_102710858
tx.2921	chr12	-	953	3	NNC	ENSMUSG00000091931.6	novel	1152	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	118.5	70	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTGTAGCCTCTT	6359	False	NA	NA	False	NA	NA	NA	102724062	102719533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_102719714_102719915_102720426_102723799
tx.2922	chr12	-	1155	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	-3	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTGTAGCCTCTT	6359	False	NA	NA	False	NA	NA	NA	102724062	102719533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_102720426_102723799
tx.2923	chr12	+	3253	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	8	0	8	0	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	102724233	102743966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
tx.2924	chr12	+	487	2	FSM	ENSMUSG00000043319.6	ENSMUST00000053611.5	458	2	-20	-9	-20	9	multi-exon	FALSE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGCTTTCTTTTTTACT	NA	False	NA	NA	False	NA	NA	NA	102865554	102866794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_102865751_102866503
tx.2925	chr12	-	722	2	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	11633	-4	11633	0	3prime_fragment	FALSE	canonical	3	41	junction_1	0	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCCCTGTGATTCCTG	NA	False	NA	NA	False	NA	NA	NA	103290210	103287400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_103287934_103290021
tx.2926	chr12	-	1176	3	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	10043	-4	10043	0	3prime_fragment	FALSE	canonical	3	27	junction_2	7	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCCCTGTGATTCCTG	NA	False	NA	NA	False	NA	NA	NA	103291800	103287400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_103287934_103290021_103290176_103291311
tx.2927	chr12	-	2879	9	FSM	ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	-28	-1	-17	1	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGGTGTTGCAGTGT	NA	False	NA	NA	False	NA	NA	NA	103392106	103374239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
tx.2928	chr12	+	910	6	FSM	ENSMUSG00000064215.14	ENSMUST00000066701.13	889	6	-20	-1	-19	1	multi-exon	FALSE	canonical	3	10	junction_3	3.54400902933387	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATTGTTCCCCTTTCT	6567	False	NA	NA	False	NA	NA	NA	103400450	103406499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403934_103403965_103405659_103405822_103406212
tx.2929	chr12	+	2057	5	NIC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-13	738	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	10.7325439668328	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGTGTTCACAGAGC	NA	False	NA	NA	False	NA	NA	NA	104214150	104220666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_104214232_104216398_104217017_104217730_104218005_104218943_104219095_104219733
tx.293	chr1	+	1088	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	30	1	30	-1	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	691	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	87142037	87155785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
tx.2930	chr12	+	1120	5	NIC	ENSMUSG00000079014.5	novel	2200	6	NA	NA	0	-806	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	10.6624340560681	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGATAATTATCTCTGA	NA	False	NA	NA	False	NA	NA	NA	104229380	104234825	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_104229474_104230560_104230695_104231352_104231972_104233914_104234066_104234702
tx.2931	chr12	+	411	2	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGTCTTGGCTCCA	645	False	NA	NA	False	NA	NA	NA	104343713	104349127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_+_104343932_104348934
tx.2932	chr12	+	1802	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9697	-2	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	21	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATCTGCTCTCAGCTTG	657	False	NA	NA	False	NA	NA	NA	104343725	104360513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
tx.2933	chr12	-	545	2	FSM	ENSMUSG00000113722.2	ENSMUST00000222812.2	527	2	-18	0	-16	0	multi-exon	FALSE	canonical	3	45	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTCTCGTCTACTC	8320	False	NA	NA	False	NA	NA	NA	104998554	104996875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_104997085_104998218
tx.2934	chr12	+	1781	2	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTTATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	105043717	105082790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_+_105043885_105081176
tx.2935	chr12	-	1398	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	-3	3	-3	-3	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	375	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	NA	False	NA	NA	NA	105188999	105183011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
tx.2936	chr12	+	1291	3	FSM	ENSMUSG00000097929.10	ENSMUST00000180458.9	3282	3	194	1797	194	-1795	multi-exon	FALSE	canonical	3	14	junction_1	9	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATAGCTCTTCTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	105303046	105348394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_105303217_105303488_105303819_105347603
tx.2937	chr12	+	1790	3	Fusion	ENSMUSG00000114181.2_ENSMUSG00000097929.10	novel	3282	3	NA	NA	-165	977	multi-exon	FALSE	canonical	0	0	junction_2	7	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACGGTCTGTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	105303086	105379241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr12_+_105303217_105303488_105303819_105377911
tx.2938	chr12	+	1183	3	NNC	ENSMUSG00000097929.10	novel	3282	3	NA	NA	-83	-1817	intron_retention	FALSE	canonical	3	11	junction_1	10.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGAGAAGCACTTCTG	NA	False	NA	NA	False	NA	NA	NA	105303168	105348372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_105303253_105303488_105303819_105347603
tx.2939	chr12	+	1128	2	FSM	ENSMUSG00000094910.2	ENSMUST00000178224.2	5786	2	-2	4660	-2	-4660	multi-exon	FALSE	canonical	3	15	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGAATGAACTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	105420112	105454694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_105420410_105453863
tx.294	chr1	+	2655	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113230.8	1569	6	377	-1463	30	-1	multi-exon	FALSE	canonical	3	1076	junction_1	501.781067797501	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	87142037	87155785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
tx.2940	chr12	+	1673	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	-26	1073	-26	-1073	multi-exon	FALSE	canonical	3	113	junction_2	9.5	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGACCTGGCTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	105651616	105668209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_105651718_105664976_105665236_105666896
tx.2941	chr12	+	522	2	FSM	ENSMUSG00000044715.8	ENSMUST00000222284.2	1064	2	546	-4	-9	4	multi-exon	FALSE	canonical	3	132	junction_1	0	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGGGTGTAAATACATT	NA	False	NA	NA	False	NA	NA	NA	105651633	105665414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_105651718_105664976
tx.2942	chr12	+	2362	4	NNC	ENSMUSG00000044715.8	novel	2720	3	NA	NA	-7	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	58.2656750487703	2	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGAGCATAAAGCAGTC	NA	False	NA	NA	False	NA	NA	NA	105651635	105669280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_105651718_105664976_105665236_105666896_105668622_105668984
tx.2943	chr12	+	1566	5	NIC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	16093	-18	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	14.2653426176871	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTATCCTGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	105727626	105748688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_105727856_105732812_105733011_105734788_105735010_105747108_105747268_105747929
tx.2944	chr12	+	801	4	ISM	ENSMUSG00000041323.7	ENSMUST00000040876.7	3099	18	55404	13601	16105	-13601	internal_fragment	FALSE	canonical	3	37	junction_2	6.54896090146283	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGAGTACCACTGTC	NA	False	NA	NA	False	NA	NA	NA	105727638	105735105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_105727856_105730211_105730281_105732812_105733011_105734788
tx.2945	chr12	+	1623	6	ISM	ENSMUSG00000041323.7	ENSMUST00000040876.7	3099	18	55418	4	16119	-4	3prime_fragment	FALSE	canonical	3	37	junction_2	5.54977477020464	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAATTGGTTTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	105727652	105748702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_105727856_105730211_105730281_105732812_105733011_105734788_105735010_105747108_105747268_105747929
tx.2946	chr12	+	4508	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	9	-137	-1	0	multi-exon	FALSE	canonical	3	846	junction_12	378.82265398812	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	105750961	105805203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
tx.2947	chr12	+	1086	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-53	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	594	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTTATTTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	105750962	105775968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
tx.2948	chr12	+	867	8	ISM	ENSMUSG00000021111.16	ENSMUST00000163805.2	1170	9	-26	1703	-26	0	5prime_fragment	FALSE	canonical	3	1577	junction_2	98.994537058097	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTTATTTCTGTGA	4465	False	NA	NA	False	NA	NA	NA	105765917	105775968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
tx.2949	chr12	+	3127	9	ISM	ENSMUSG00000021111.16	ENSMUST00000169938.8	4356	21	34045	0	908	0	3prime_fragment	FALSE	canonical	3	880	junction_1	60.3819871733284	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	327	False	NA	NA	False	NA	NA	NA	105785046	105805203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
tx.295	chr1	+	1908	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	-54	0	-54	0	multi-exon	FALSE	canonical	3	11	junction_2	0.942809041582063	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTGCCTTTTTGGT	1354	False	NA	NA	False	NA	NA	NA	87192030	87238561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
tx.2950	chr12	+	1706	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-24	2029	-15	-12	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	350	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	NA	False	NA	NA	NA	105976526	106041656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
tx.2951	chr12	+	1644	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	42	-177	-13	-12	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	330	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	NA	False	NA	NA	NA	105976528	106041656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
tx.2952	chr12	-	2516	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	71	168	-16	67	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACTCGAGTCCTCGTT	NA	False	NA	NA	False	NA	NA	NA	108145502	108072857	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
tx.2953	chr12	+	2570	12	FSM	ENSMUSG00000021258.11	ENSMUST00000221167.2	2789	12	221	-2	62	0	multi-exon	FALSE	canonical	3	54	junction_11	12.5217166726353	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTGTGAGTACAGCC	NA	False	NA	NA	False	NA	NA	NA	108146058	108169618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
tx.2954	chr12	+	925	8	ISM	ENSMUSG00000021262.16	ENSMUST00000172409.2	1955	15	40414	-3	64	0	3prime_fragment	FALSE	canonical	3	151	junction_2	17.4274004290452	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	6180	False	NA	NA	False	NA	NA	NA	108642425	108654775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
tx.2955	chr12	-	2722	9	ISM	ENSMUSG00000021266.17	ENSMUST00000161410.8	2764	10	4649	4	-132	0	3prime_fragment	FALSE	canonical	3	1852	junction_6	109.028021054223	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	NA	False	NA	NA	NA	108854475	108825959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301
tx.2956	chr12	-	1863	11	NIC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_1	519.514003661114	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	NA	False	NA	NA	NA	108860071	108825959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
tx.2957	chr12	-	2801	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	26	4	-11	0	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	398	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	NA	False	NA	NA	NA	108860074	108825959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
tx.2958	chr12	+	1640	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-17675	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.6262900483478	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	108969052	108994378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_108969174_108990888_108991060_108992335_108992477_108993171
tx.2959	chr12	+	649	2	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGAACATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	109918243	109919716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_+_109918700_109919523
tx.296	chr1	+	1472	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	-24	1567	3	495	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTTCTTTTTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	87254727	87283939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
tx.2960	chr12	-	763	6	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.99332590941915	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAATCAGATTGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	110254387	110249679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr12_-_110249896_110250719_110250838_110250953_110251025_110252234_110252424_110253294_110253364_110254287
tx.2961	chr12	+	1534	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	58	775	57	2	multi-exon	TRUE	canonical	3	738	junction_1	90.3704039902189	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTCTTGTATAAGTACT	4978	False	NA	NA	False	NA	NA	NA	110452229	110537347	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
tx.2962	chr12	+	1565	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	11739	2	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	282.435306715253	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTCTTGTATAAGTACT	106	False	NA	NA	False	NA	NA	NA	110464031	110537347	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_110464220_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
tx.2963	chr12	+	1175	3	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	82040	-2	81919	2	3prime_fragment	FALSE	canonical	3	966	junction_2	39	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTATTTTCCTATG	NA	False	NA	NA	False	NA	NA	NA	110534211	110538124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_110534290_110535387_110535490_110537129
tx.2964	chr12	-	2772	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	86	423	-20	0	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	7842	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	110662743	110657461	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
tx.2965	chr12	+	2378	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	6	0	6	0	multi-exon	FALSE	canonical	3	142	junction_2	4	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	5352	False	NA	NA	False	NA	NA	NA	110704431	110761462	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_110704712_110745729_110745913_110759547
tx.2966	chr12	+	1280	3	FSM	ENSMUSG00000037957.15	ENSMUST00000193053.6	1351	3	72	-1	-2	1	multi-exon	FALSE	canonical	3	22	junction_2	64	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGTTTATCCTTTTTT	5370	False	NA	NA	False	NA	NA	NA	110704449	110770673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_110704712_110745729_110745913_110769838
tx.2967	chr12	-	1688	12	FSM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	5	0	-4	0	multi-exon	FALSE	canonical	3	80	junction_11	66.0974737267458	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7665	False	NA	NA	False	NA	NA	NA	110807368	110774231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
tx.2968	chr12	-	1457	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	20	552	-1	0	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3369	False	NA	NA	False	NA	NA	NA	110855559	110839595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
tx.2969	chr12	-	744	5	FSM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	-9	-12	-1	6	multi-exon	FALSE	canonical	3	69	junction_1	152.938508885107	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTTAATCTGCTTGCTG	3369	False	NA	NA	False	NA	NA	NA	110855559	110841455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323_110850493_110855499
tx.297	chr1	+	1016	5	ISM	ENSMUSG00000048000.16	ENSMUST00000173850.8	2520	9	-27	25034	-8	194	5prime_fragment	FALSE	canonical	3	140	junction_4	32.0078115465584	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAAACATTTA	NA	False	NA	NA	False	NA	NA	NA	87254742	87293571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905
tx.2970	chr12	-	1589	4	NNC	ENSMUSG00000037904.15	novel	1563	4	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	38.9386982604994	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTGCCTGGTCTGTTGC	NA	False	NA	NA	False	NA	NA	NA	110945430	110942855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_110943983_110944079_110944205_110944381_110944562_110945273
tx.2971	chr12	-	1556	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	9	-2	9	0	multi-exon	FALSE	canonical	0	0	junction_1	45.784519460427	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	110945420	110942860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
tx.2972	chr12	-	1458	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	45	1074	0	0	multi-exon	FALSE	canonical	3	78	junction_1	17	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	110945429	110942860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_110943983_110944381_110944562_110945273
tx.2973	chr12	-	1680	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	26	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	30.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	110945429	110942860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_110944205_110944381_110944562_110945273
tx.2974	chr12	+	1707	12	NNC	ENSMUSG00000021278.8	novel	1024	7	NA	NA	-316	7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	8.49696105130758	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTGGTCCTACTTGTAA	NA	False	NA	NA	False	NA	NA	NA	111237212	111242693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_111237456_111238130_111238250_111238331_111238377_111240576_111240665_111240792_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
tx.2975	chr12	+	1538	12	FSM	ENSMUSG00000021278.8	ENSMUST00000021707.8	1701	12	-4	167	-4	7	multi-exon	FALSE	canonical	3	12	junction_1	7.23969772438711	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTGGTCCTACTTGTAA	NA	False	NA	NA	False	NA	NA	NA	111237524	111242693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_111237599_111238130_111238250_111238331_111238377_111240576_111240665_111240792_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
tx.2976	chr12	+	3541	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	3	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	704.792026061589	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	NA	NA	NA	111504603	111513025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_111504674_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
tx.2977	chr12	+	1316	5	ISM	ENSMUSG00000021282.18	ENSMUST00000050993.11	1969	11	3390	-320	-53	244	3prime_fragment	FALSE	canonical	3	2160	junction_1	107.067735569592	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAAGTTGTGGTTTTCC	NA	False	NA	NA	False	NA	NA	NA	111508605	111511677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
tx.2978	chr12	+	2162	2	ISM	ENSMUSG00000021282.18	ENSMUST00000221243.2	622	3	732	-2010	732	3	3prime_fragment	FALSE	canonical	3	2291	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	NA	NA	NA	111509996	111513025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_111510096_111510962
tx.2979	chr12	+	1957	9	ISM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	52780	-63	3322	2	3prime_fragment	FALSE	canonical	3	315	junction_7	92.5141036545239	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	1604	False	NA	NA	False	NA	NA	NA	111594264	111622657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
tx.298	chr1	+	3146	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	6	790	6	18	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTTAAGTGCTTT	9376	False	NA	NA	False	NA	NA	NA	87603966	87647434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
tx.2980	chr12	+	1473	7	ISM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	53313	402	3327	122	3prime_fragment	FALSE	canonical	3	91	junction_6	160.516527359508	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	1609	False	NA	NA	False	NA	NA	NA	111594269	111622250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
tx.2981	chr12	-	1434	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	38	0	-17	0	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	4072	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	111638734	111635794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
tx.2982	chr12	+	2053	4	NNC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.883871632464	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	NA	False	NA	NA	NA	111644539	111650336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_111644596_111644974_111645397_111647235_111647503_111649028
tx.2983	chr12	+	1989	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	NA	False	NA	NA	NA	111644541	111650336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
tx.2984	chr12	+	2120	4	FSM	ENSMUSG00000060950.13	ENSMUST00000168338.2	2131	4	11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100.883871632464	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	NA	False	NA	NA	NA	111644549	111650336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_111644735_111645036_111645397_111647235_111647503_111649028
tx.2985	chr12	+	2415	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	18	0	7	0	multi-exon	FALSE	canonical	3	213	junction_2	1	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	NA	False	NA	NA	NA	111644556	111650336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_111645397_111647235_111647503_111649028
tx.2986	chr12	-	2084	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	55	0	55	0	multi-exon	FALSE	canonical	3	159	junction_1	0	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	111679636	111675921	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_111677847_111679477
tx.2987	chr12	+	1063	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	5	-3	5	3	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	335	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAAGTTGAGAATAAGCC	1546	False	NA	NA	False	NA	NA	NA	111679699	111700657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
tx.2988	chr12	+	2394	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	41.916157811926	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	111725318	111761331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111760770
tx.2989	chr12	+	2373	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	43	3	combination_of_known_splicesites	FALSE	canonical	2	52	junction_13	31.1312633144811	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	111725325	111773148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
tx.299	chr1	+	4120	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	6	-1	6	0	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTCCTGACTGTGTG	9376	False	NA	NA	False	NA	NA	NA	87603966	87648225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
tx.2990	chr12	-	2455	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	-32	-1	0	0	multi-exon	FALSE	canonical	3	57	junction_7	12.8809303758284	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACTTGCAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	111780307	111769625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
tx.2991	chr12	+	1284	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	26	-2	-12	2	multi-exon	FALSE	canonical	3	470	junction_5	111.029525602677	651	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	NA	False	NA	NA	NA	111780629	111794822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
tx.2992	chr12	+	1336	8	FSM	ENSMUSG00000021286.9	ENSMUST00000223211.2	794	8	-10	-532	-10	2	multi-exon	FALSE	canonical	3	188	junction_5	258.732309855699	205	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	NA	False	NA	NA	NA	111780631	111794822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
tx.2993	chr12	+	1270	7	NNC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	264.970700686363	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	NA	False	NA	NA	NA	111780640	111794822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793979_111794120_111794251
tx.2994	chr12	-	398	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	-32	0	-32	0	multi-exon	TRUE	canonical	3	2424	junction_1	129.659382828839	1524	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	NA	False	NA	NA	NA	111933443	111927808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
tx.2995	chr12	+	2585	15	FSM	ENSMUSG00000037686.7	ENSMUST00000079400.6	2722	15	137	0	-53	0	multi-exon	TRUE	canonical	2	5	junction_3	6.52467842666814	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGGCCTGGATGGGT	NA	False	NA	NA	False	NA	NA	NA	112073249	112093993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_112073408_112078625_112078735_112079414_112079527_112080813_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
tx.2996	chr12	+	1804	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	-8	-19	-8	-2	multi-exon	FALSE	canonical	3	62	junction_2	10.1005362893924	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTTGACTTCGTCC	NA	False	NA	NA	False	NA	NA	NA	112586470	112607792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
tx.2997	chr12	+	1111	6	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	14453	2	-4826	-2	3prime_fragment	FALSE	canonical	3	75	junction_2	8.2365041127896	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTTGACTTCGTCC	1590	False	NA	NA	False	NA	NA	NA	112600979	112607792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_+_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
tx.2998	chr12	+	709	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	215	0	-73	0	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	651	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7070	False	NA	NA	False	NA	NA	NA	112611327	112615579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
tx.2999	chr12	-	1317	4	ISM	ENSMUSG00000001729.15	ENSMUST00000128300.9	1342	12	14614	-847	23	-5	3prime_fragment	TRUE	canonical	3	299	junction_2	40.1081870279207	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGTTTGCTTTCTGG	9705	False	NA	NA	False	NA	NA	NA	112623384	112620259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210
tx.3	chr1	+	2455	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	49	3	-24	-3	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	532	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGCTTTATATAGTACT	NA	False	NA	NA	False	NA	NA	NA	4878094	4916959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
tx.30	chr1	-	1870	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	26	2598	26	-2598	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	702	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTGATTAATAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	13730744	13696151	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
tx.300	chr1	+	2421	7	ISM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	33422	7	320	-7	3prime_fragment	FALSE	canonical	3	491	junction_3	30.6684782073639	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTAACTGGGCCTCCTG	255	False	NA	NA	False	NA	NA	NA	87637382	87648217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
tx.3000	chr12	+	1949	5	FSM	ENSMUSG00000037594.12	ENSMUST00000037014.11	1960	5	6	5	6	-5	multi-exon	FALSE	canonical	3	27	junction_2	3.74165738677394	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTTTTTGTTGAC	3907	False	NA	NA	False	NA	NA	NA	112772562	112779867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_112773429_112774493_112774631_112775802_112775933_112778082_112778200_112779168
tx.3001	chr12	-	1979	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	20	-5	-14	-3	multi-exon	FALSE	canonical	3	463	junction_1	0	338	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTAGGAGCCTTTT	9632	False	NA	NA	False	NA	NA	NA	112793023	112783851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_112785733_112792925
tx.3002	chr12	-	817	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	-12	436	-12	2	multi-exon	FALSE	canonical	3	180	junction_2	18.0277563773199	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGCTGGCTTTGAGCAC	8835	False	NA	NA	False	NA	NA	NA	112905756	112898346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
tx.3003	chr12	-	772	5	FSM	ENSMUSG00000002804.5	ENSMUST00000002881.5	734	5	-13	-25	-6	-1	multi-exon	FALSE	canonical	3	29	junction_2	82.3995600716412	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCCGCTGGCTTTGAG	8841	False	NA	NA	False	NA	NA	NA	112905750	112898349	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_112898671_112901975_112902178_112902414_112902480_112902898_112902943_112905610
tx.3004	chr12	+	2075	4	FSM	ENSMUSG00000002803.15	ENSMUST00000221104.2	2085	4	5	5	5	-5	multi-exon	FALSE	canonical	3	44	junction_3	3.55902608401044	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATGTAGATAAGTGACT	NA	False	NA	NA	False	NA	NA	NA	112940174	112942560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
tx.3005	chr12	+	1164	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	275	0	-61	0	multi-exon	FALSE	canonical	3	743	junction_5	14.1745076340121	394	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	5897	False	NA	NA	False	NA	NA	NA	113104130	113109126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
tx.3006	chr12	+	476	6	NNC	ENSMUSG00000006360.12	novel	445	5	NA	NA	-214	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	164.865278333553	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGTTTTTGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	113115417	113117499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_113115517_113115701_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
tx.3007	chr12	+	408	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	39	-2	-2	0	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGTTTTTGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	113115670	113117499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
tx.3008	chr12	+	933	6	NNC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	-11	1205	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_5	67.517108942845	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGGTGGCGCATGCCT	NA	False	NA	NA	False	NA	NA	NA	113120029	113122414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113122174
tx.3009	chr12	+	1603	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	-4	842	-4	-842	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTTGTTTCCCTGAA	NA	False	NA	NA	False	NA	NA	NA	113120036	113127322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
tx.301	chr1	+	1959	5	ISM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	36963	-1	3861	0	3prime_fragment	FALSE	canonical	3	151	junction_2	175.191859114515	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTCCTGACTGTGTG	200	False	NA	NA	False	NA	NA	NA	87640923	87648225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
tx.3010	chr12	-	2429	2	NNC	ENSMUSG00000112980.2	novel	2941	2	NA	NA	34	-439	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGTGTCTCGC	NA	False	NA	NA	False	NA	NA	NA	116368796	116366005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr12_-_116368264_116368625
tx.3011	chr12	-	2467	2	FSM	ENSMUSG00000112980.2	ENSMUST00000220477.2	2941	2	31	443	31	-443	multi-exon	FALSE	canonical	2	13	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTCCAGTCTCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	116368799	116366009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr12_-_116368264_116368586
tx.3012	chr12	+	3616	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-42	-934	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	NA	False	NA	NA	NA	116368979	116424297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
tx.3013	chr12	+	3623	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-19	-934	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	NA	False	NA	NA	NA	116369002	116424297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
tx.3014	chr13	+	1914	4	FSM	ENSMUSG00000097709.9	ENSMUST00000186610.7	630	4	-72	-1212	2	1192	multi-exon	FALSE	canonical	3	8	junction_3	9.84321537348893	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTCATTTTTCTTGTA	NA	False	NA	NA	False	NA	NA	NA	3528231	3540475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_3528391_3529908_3530002_3535048_3535221_3538985
tx.3015	chr13	+	1175	4	FSM	ENSMUSG00000097709.9	ENSMUST00000221008.2	2568	4	-24	1417	0	575	multi-exon	FALSE	canonical	2	6	junction_1	6.18241233033047	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTGACCAACCAGTTT	NA	False	NA	NA	False	NA	NA	NA	3528242	3542981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_3528353_3529908_3530002_3535048_3535221_3542181
tx.3016	chr13	+	2213	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	40	2050	20	1	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	617	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGTATTGAGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	3588102	3615821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
tx.3017	chr13	+	2387	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	18	2048	18	1288	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCCCTGTGTCTTATT	NA	False	NA	NA	False	NA	NA	NA	3684049	3701774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
tx.3018	chr13	-	3431	12	FSM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	21	-772	-21	129	multi-exon	FALSE	canonical	3	132	junction_9	26.5501241222916	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	NA	False	NA	NA	NA	3968199	3932560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
tx.3019	chr13	+	1215	9	FSM	ENSMUSG00000021213.13	ENSMUST00000021634.4	1262	9	53	-6	19	6	multi-exon	FALSE	canonical	1	2	junction_3	2.98956518577535	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTTTGTTTTTTGTT	7410	False	NA	NA	False	NA	NA	NA	4241201	4255601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_4241310_4244032_4244201_4244675_4244793_4246431_4246510_4246987_4247111_4247799_4247910_4248476_4248643_4253365_4253449_4255339
tx.302	chr1	+	718	4	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	7	29028	7	-282	5prime_fragment	FALSE	canonical	3	363	junction_2	19.7033556081755	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCCCTCTTTGTGTCA	4077	False	NA	NA	False	NA	NA	NA	87781015	87843184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821
tx.3020	chr13	-	1508	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	17	1938	17	-1931	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTTTAATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	4659156	4642686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
tx.3021	chr13	-	1138	9	ISM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	1711	2140	1655	-2133	3prime_fragment	FALSE	canonical	3	141	junction_4	12.5797456254091	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTGACAGAAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	4657462	4642888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389
tx.3022	chr13	+	3419	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	12	475	4	-2	multi-exon	TRUE	canonical	3	407	junction_1	134.848435629472	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAGTTTTACTCATTA	NA	False	NA	NA	False	NA	NA	NA	6598198	6630076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
tx.3023	chr13	+	3417	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	112.248614598533	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAGTTTTACTCATTAT	NA	False	NA	NA	False	NA	NA	NA	6598198	6630077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
tx.3024	chr13	+	2535	20	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	9695	473	-9157	0	3prime_fragment	FALSE	canonical	3	789	junction_6	92.0218569724868	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	2888	False	NA	NA	False	NA	NA	NA	6607881	6630078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
tx.3025	chr13	-	2714	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	25	1406	25	8	multi-exon	FALSE	canonical	3	963	junction_15	143.890705562911	633	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	6698788	6631209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
tx.3026	chr13	-	2568	21	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	18	8	combination_of_known_splicesites	FALSE	canonical	3	40	junction_6	289.380247252642	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	6698795	6631209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
tx.3027	chr13	-	1608	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	-17	2189	4	0	multi-exon	FALSE	canonical	3	80	junction_4	6.36396103067893	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTATACAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	8921076	8902704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
tx.3028	chr13	-	1856	5	FSM	ENSMUSG00000021147.18	ENSMUST00000164183.9	1780	5	-76	0	-11	0	multi-exon	FALSE	canonical	3	18	junction_4	30.7774267930248	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTATACAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	8921091	8902704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
tx.3029	chr13	+	2540	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	411	76	-31	-76	multi-exon	TRUE	canonical	3	487	junction_1	56.3576747213722	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTAATATCTGG	NA	False	NA	NA	False	NA	NA	NA	8935947	8942411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
tx.303	chr1	-	4207	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	33	638	-21	-638	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8624	False	NA	NA	False	NA	NA	NA	88205322	88190830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
tx.3030	chr13	-	2450	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	39	6294	6	-145	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	376	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATGACTTACATTTTG	NA	False	NA	NA	False	NA	NA	NA	9046080	9022660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
tx.3031	chr13	-	2530	3	ISM	ENSMUSG00000021156.18	ENSMUST00000222038.2	1591	4	1239	-1457	864	0	3prime_fragment	FALSE	canonical	3	114	junction_2	13.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	9739682	9734871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_9737021_9739098_9739285_9739487
tx.3032	chr13	-	905	7	ISM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	135	10842	-19	-537	5prime_fragment	FALSE	canonical	3	34	junction_6	49.4873721266345	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCTTTGTAATTCATAC	NA	False	NA	NA	False	NA	NA	NA	9815215	9745710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
tx.3033	chr13	-	844	7	ISM	ENSMUSG00000021156.18	ENSMUST00000154994.8	867	8	32	545	6	-540	5prime_fragment	FALSE	canonical	3	65	junction_6	41.9023335335343	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTTCTTTGTAATTCA	NA	False	NA	NA	False	NA	NA	NA	9814448	9745713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
tx.3034	chr13	-	1128	5	ISM	ENSMUSG00000021311.10	ENSMUST00000220473.2	1784	8	6819	-9	6816	9	3prime_fragment	FALSE	canonical	3	181	junction_4	14.2543852901484	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGGAGAATATATAGAG	NA	False	NA	NA	False	NA	NA	NA	12208557	12201414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499
tx.3035	chr13	-	1075	7	ISM	ENSMUSG00000052374.17	ENSMUST00000168193.8	2920	22	61765	-9	3593	0	3prime_fragment	FALSE	canonical	3	42	junction_5	11.7473401244707	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGACAAACTTTATTAAG	NA	False	NA	NA	False	NA	NA	NA	12293840	12284311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679
tx.3036	chr13	+	629	3	ISM	ENSMUSG00000050244.10	ENSMUST00000222091.2	2482	17	10877	1392	1210	4	internal_fragment	FALSE	canonical	3	524	junction_2	5.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	NA	False	NA	NA	False	NA	NA	NA	12450498	12453778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_12450710_12452714_12452824_12453469
tx.3037	chr13	-	1411	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	232	1149	0	279	multi-exon	FALSE	canonical	0	0	junction_5	18.5718491337539	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATGGCAAGCATACTT	NA	False	NA	NA	False	NA	NA	NA	12476387	12455446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
tx.3038	chr13	-	2207	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-36	180	-5	1	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTGTAGAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	13568185	13533199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
tx.3039	chr13	-	1962	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	14	995	-5	1	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTGTAGAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	13568185	13533199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
tx.304	chr1	-	620	3	ISM	ENSMUSG00000044783.17	ENSMUST00000147393.2	2030	5	-34	9734	17	0	5prime_fragment	FALSE	canonical	3	259	junction_2	28.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTCTTTTCTTCCTC	8684	False	NA	NA	False	NA	NA	NA	88205262	88202433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_88202820_88204940_88205008_88205095
tx.3040	chr13	-	1354	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	9	2271	-1	-2271	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCCTAAGATACTGAC	NA	False	NA	NA	False	NA	NA	NA	13568200	13535471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
tx.3041	chr13	-	1251	8	NNC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-3	-2295	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	69.6806124765134	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATTTGTCATTCTTAA	NA	False	NA	NA	False	NA	NA	NA	13568202	13535495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539682_13539762_13539781_13542173_13542397_13548943_13548994_13567709
tx.3042	chr13	+	2659	4	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	70125	-6	-1036	6	3prime_fragment	FALSE	canonical	3	823	junction_2	27.0678160675491	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTGCTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	13682260	13686860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_13682353_13683302_13683427_13684017_13684131_13684530
tx.3043	chr13	+	3694	12	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	22	junction_7	55.6602741252905	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	14129210	14173659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
tx.3044	chr13	+	3737	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	155	0	-1	0	multi-exon	FALSE	canonical	3	178	junction_5	19.409889274617	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	14129208	14173659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
tx.3045	chr13	+	2368	13	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	55.6334107249312	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	14129223	14173659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172963
tx.3046	chr13	-	1842	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	5	-3	5	0	multi-exon	FALSE	canonical	3	97	junction_4	17.0705109399221	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTCTGCCCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	14214218	14172533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
tx.3047	chr13	-	1948	4	FSM	ENSMUSG00000039233.13	ENSMUST00000160776.2	909	4	0	-1039	0	1039	multi-exon	FALSE	canonical	3	140	junction_1	12.4988888395018	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	14214202	14192820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_14194473_14202282_14202368_14203860_14203992_14214122
tx.3048	chr13	-	1155	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	75	3014	0	296	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTAGCTTCTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	14237998	14228257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
tx.3049	chr13	-	1305	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	-6	296	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTAGCTTCTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	14238009	14228257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
tx.305	chr1	-	2807	2	FSM	ENSMUSG00000044783.17	ENSMUST00000126739.2	2780	2	-27	0	27	0	multi-exon	FALSE	canonical	3	259	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTCTTTTCTTCCTC	8618	False	NA	NA	False	NA	NA	NA	88205328	88202433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_88205008_88205095
tx.3050	chr13	-	1548	6	NIC	ENSMUSG00000021302.11	novel	804	5	NA	NA	-6	296	intron_retention	FALSE	canonical	3	12	junction_3	118.416890687098	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTAGCTTCTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	14237964	14228257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233508_14233797_14233903_14234043_14237790
tx.3051	chr13	+	1640	15	FSM	ENSMUSG00000039219.19	ENSMUST00000110533.2	3020	15	-22	1402	-7	-1402	multi-exon	FALSE	canonical	3	52	junction_14	10.1962878399095	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATGCCAAAAGAGGAGAC	1421	False	NA	NA	False	NA	NA	NA	14238361	14338865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693
tx.3052	chr13	-	801	3	FSM	ENSMUSG00000015672.5	ENSMUST00000221699.2	1174	3	-13	386	-11	74	multi-exon	FALSE	canonical	3	41	junction_2	520.5	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGGATTAATTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	14787623	14784883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_14785326_14786007_14786190_14787446
tx.3053	chr13	-	781	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	117	2115	-21	74	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	703	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGGATTAATTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	14787633	14784883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_14785326_14786007_14786190_14787476
tx.3054	chr13	+	852	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	12	2047	12	-2047	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	2829	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	14787836	14800174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
tx.3055	chr13	+	2035	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGTTTTTCATTGT	NA	False	NA	NA	False	NA	NA	NA	14804738	14812788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_14804870_14810884
tx.3056	chr13	+	2008	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	10	896	10	-3	multi-exon	FALSE	canonical	3	129	junction_1	0	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGGCCTGTTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	14804842	14812785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_14804950_14810884
tx.3057	chr13	-	496	3	FSM	ENSMUSG00000055137.8	ENSMUST00000220514.2	1351	3	-28	883	-28	-880	multi-exon	FALSE	canonical	3	10	junction_1	1.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTTCTGGTAGTGAG	NA	False	NA	NA	False	NA	NA	NA	17869382	17858177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_17858438_17859293_17859371_17869223
tx.3058	chr13	+	897	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	6	1769	6	80	multi-exon	FALSE	canonical	3	374	junction_1	0	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTTTTGTGAATATG	NA	False	NA	NA	False	NA	NA	NA	17870003	17871921	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_17870406_17871426
tx.3059	chr13	-	491	3	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	50993	1740	50703	-1740	3prime_fragment	FALSE	canonical	3	817	junction_1	49.5	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGGCTCAATTGACTGA	NA	False	NA	NA	False	NA	NA	NA	18067831	18056895	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_18057087_18063091_18063267_18067706
tx.306	chr1	+	1273	3	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-27	9689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCGAGTGACAATGTCTC	NA	False	NA	NA	False	NA	NA	NA	88387377	88402969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_88387678_88398642_88398830_88402183
tx.3060	chr13	-	632	4	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	47229	1741	46939	-1741	3prime_fragment	FALSE	canonical	3	817	junction_1	52.9297227987787	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGGCTCAATTGACTG	NA	False	NA	NA	False	NA	NA	NA	18071595	18056896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537
tx.3061	chr13	-	1873	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	0	6871	0	634	multi-exon	FALSE	canonical	3	467	junction_2	27.5	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTCTACATTGTAT	NA	False	NA	NA	False	NA	NA	NA	18167934	18162785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_18164368_18166212_18166335_18167765
tx.3062	chr13	-	2633	2	ISM	ENSMUSG00000075054.6	ENSMUST00000222796.2	1382	3	-223	14	2	-14	intron_retention	FALSE	canonical	3	522	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAAAAAAAAAACAGTTT	NA	False	NA	NA	False	NA	NA	NA	18167911	18163433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_18164368_18166212
tx.3063	chr13	+	3184	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	9	6	9	-6	multi-exon	TRUE	canonical	3	419	junction_25	60.5186237990473	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATCCTTTATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	18901468	19050975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
tx.3064	chr13	-	1405	8	FSM	ENSMUSG00000003062.14	ENSMUST00000199278.3	1074	8	-5	-326	-1	1	multi-exon	FALSE	canonical	3	699	junction_7	61.3454587245254	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTGTTGTCTGTATT	NA	False	NA	NA	False	NA	NA	NA	19579930	19541844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
tx.3065	chr13	-	1420	10	FSM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	-29	0	-4	0	multi-exon	FALSE	canonical	3	23	junction_9	324.011659598163	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	19579933	19541845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
tx.3066	chr13	-	1295	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	32	0	-4	0	multi-exon	FALSE	canonical	3	699	junction_8	60.3857392105123	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	19579933	19541845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
tx.3067	chr13	-	1407	10	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	323.803705207604	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	19579942	19541845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19578101_19578205_19579873
tx.3068	chr13	-	1155	8	FSM	ENSMUSG00000003062.14	ENSMUST00000200323.3	1128	8	-26	-1	-1	1	multi-exon	FALSE	canonical	3	54	junction_1	267.855352374968	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCATGCCCCTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	19579930	19549124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
tx.3069	chr13	-	1273	9	NNC	ENSMUSG00000003062.14	novel	1128	8	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	340.955069437309	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTCATGCCCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	19579927	19549126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_19549516_19549601_19549725_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
tx.307	chr1	+	351	2	NIC	ENSMUSG00000097398.3	novel	358	3	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	53	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTCTTGGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	88682625	88683458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_88682774_88683255
tx.3070	chr13	-	2355	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	-1	9	-1	-9	multi-exon	FALSE	canonical	3	59	junction_2	5.5	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTATCTTCAGAGCCTA	NA	False	NA	NA	False	NA	NA	NA	19803975	19775884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_19777519_19778616_19778826_19803463
tx.3071	chr13	+	1886	6	FSM	ENSMUSG00000021319.8	ENSMUST00000002883.7	1764	6	-123	1	-52	-1	multi-exon	FALSE	canonical	2	8	junction_1	1.72046505340853	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTGTTTGTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	19807221	19816998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235_19814300_19816348
tx.3072	chr13	+	1872	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74257	-2	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	9.14549069213894	11	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGTGTGGGCATAATTG	NA	False	NA	NA	False	NA	NA	NA	21120545	21208420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
tx.3073	chr13	+	1878	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	462	1864	169	-4	multi-exon	TRUE	canonical	3	719	junction_6	36.2209771220141	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATACGTTTTGTTTTTG	1391	False	NA	NA	False	NA	NA	NA	21364562	21377029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
tx.3074	chr13	+	1365	7	ISM	ENSMUSG00000021326.14	ENSMUST00000221464.2	1400	8	842	-13	842	1	3prime_fragment	FALSE	canonical	3	719	junction_5	39.0939040431284	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTTGTTTTTGTTATG	2978	False	NA	NA	False	NA	NA	NA	21366149	21377034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
tx.3075	chr13	+	1268	5	FSM	ENSMUSG00000004341.9	ENSMUST00000004453.9	1340	5	73	-1	73	1	multi-exon	FALSE	canonical	3	9	junction_2	5.71729831301464	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTCTGAGTGATGTT	998	False	NA	NA	False	NA	NA	NA	21496367	21503795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_21496515_21497817_21497972_21501154_21501273_21501738_21501839_21503046
tx.3076	chr13	+	1955	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	-9	2459	-9	-1	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATACTGTCCTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	21546980	21554000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
tx.3077	chr13	+	1895	3	FSM	ENSMUSG00000036721.15	ENSMUST00000099720.3	2182	3	295	-8	295	1	multi-exon	FALSE	canonical	3	63	junction_1	5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGTCCTTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	21547749	21554002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_21548222_21550784_21550927_21552721
tx.3078	chr13	-	2556	6	FSM	ENSMUSG00000021327.20	ENSMUST00000116434.11	2600	6	38	6	-1	-6	multi-exon	FALSE	canonical	3	29	junction_5	29.6486087363303	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCCTGTTGGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	21586887	21571178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
tx.3079	chr13	-	2582	6	FSM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	-22	1	-4	-1	multi-exon	FALSE	canonical	3	51	junction_5	21.2452347598232	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTTCTTACTTGG	NA	False	NA	NA	False	NA	NA	NA	21586905	21571173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
tx.308	chr1	+	560	2	NIC	ENSMUSG00000097398.3	novel	479	3	NA	NA	-17	3	intron_retention	FALSE	canonical	3	14	junction_1	0	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTTGGCTCCTTATT	NA	False	NA	NA	False	NA	NA	NA	88682658	88683461	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_88683013_88683255
tx.3080	chr13	-	4307	6	FSM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	2	57	2	-57	multi-exon	FALSE	canonical	2	8	junction_3	4.81663783151692	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGATTTTTAAATGGTG	NA	False	NA	NA	False	NA	NA	NA	21637898	21626406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_21630000_21631955_21632065_21632336_21632655_21633443_21633504_21633610_21633687_21637747
tx.3081	chr13	+	2458	3	FSM	ENSMUSG00000054931.8	ENSMUST00000062609.6	2400	3	-58	0	-58	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTTAGAGTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	21663018	21669677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_21663680_21665443_21665601_21668037
tx.3082	chr13	+	2822	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	-24	-95	-24	-23	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCATAAATAGTTGCAC	NA	False	NA	NA	False	NA	NA	NA	22129239	22144750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
tx.3083	chr13	+	2761	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	143	294	118	0	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	22129424	22144655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
tx.3084	chr13	-	3185	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-4	-2366	3	-1724	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTTATTATTATACAT	9016	False	NA	NA	False	NA	NA	NA	23553368	23538996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
tx.3085	chr13	-	2771	5	FSM	ENSMUSG00000046351.12	ENSMUST00000145451.8	1261	5	192	-1702	-9	1701	multi-exon	FALSE	canonical	3	23	junction_4	37.5499667110372	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTGTGGTTTATTGTT	9205	False	NA	NA	False	NA	NA	NA	23553179	23539499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553026
tx.3086	chr13	-	1284	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	-10	3182	-10	-3182	multi-exon	FALSE	canonical	3	221	junction_1	5.5	173	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTTTAGTTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	23608046	23605712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_23606506_23606652_23606853_23607755
tx.3087	chr13	+	735	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	1	420	1	-420	multi-exon	FALSE	canonical	3	53	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCATGTTATATCACGT	184	False	NA	NA	False	NA	NA	NA	23868182	23876471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_23868605_23876158
tx.3088	chr13	-	978	7	FSM	ENSMUSG00000006715.12	ENSMUST00000110382.9	963	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	1483	junction_6	81.6382603658086	1392	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	NA	False	NA	NA	NA	24945921	24935827	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
tx.3089	chr13	-	690	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	28	3	28	-3	multi-exon	FALSE	canonical	3	260	junction_1	3	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTAAGGAAGTATTTTC	4845	False	NA	NA	False	NA	NA	NA	25015472	25001933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_25002175_25004697_25004883_25015208
tx.309	chr1	+	790	2	NNC	ENSMUSG00000092627.3	novel	1372	2	NA	NA	-35	679	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGACCCGATTCTTTG	NA	False	NA	NA	False	NA	NA	NA	89857920	89860263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_89858176_89859728
tx.3090	chr13	+	1951	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	0	6	0	-5	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACTACGACTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	25015661	25026130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
tx.3091	chr13	+	2192	10	FSM	ENSMUSG00000035910.16	ENSMUST00000069614.7	6634	10	-293	4735	-44	436	multi-exon	TRUE	canonical	3	14	junction_2	2.86744175568088	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTTTCAGAGATAATTT	NA	False	NA	NA	False	NA	NA	NA	25239942	25389954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
tx.3092	chr13	+	725	4	FSM	ENSMUSG00000086363.8	ENSMUST00000140415.8	682	4	-36	-7	-36	7	multi-exon	TRUE	canonical	2	2	junction_3	1.24721912892465	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTTATAGTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	29200239	29212787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_29200375_29200692_29200863_29207158_29207196_29212404
tx.3093	chr13	+	891	6	NNC	ENSMUSG00000086363.8	novel	682	4	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.0591260281974	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATCGAGTTATAGTTT	NA	False	NA	NA	False	NA	NA	NA	29200257	29212781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_29200375_29200692_29200863_29207158_29207196_29207613_29207707_29208701_29208799_29212404
tx.3094	chr13	-	1555	5	NIC	ENSMUSG00000006191.18	novel	694	6	NA	NA	-1	1039	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	85.65738438687	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTATAGAAATGTGTGC	NA	False	NA	NA	False	NA	NA	NA	30039658	30019938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_30021054_30030210_30030324_30033921_30034092_30038880_30038925_30039545
tx.3095	chr13	-	1893	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	9	3195	9	-3195	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGATGAATTAATTTT	NA	False	NA	NA	False	NA	NA	NA	30170037	30093752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
tx.3096	chr13	-	1186	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	33	144	33	-144	multi-exon	FALSE	canonical	3	2063	junction_1	0	350	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTTCTCATCTAAATT	NA	False	NA	NA	False	NA	NA	NA	30729312	30724434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_30725325_30729016
tx.3097	chr13	+	1073	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	88	0	-14	0	multi-exon	FALSE	canonical	3	16	junction_7	7.4258236676383	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	30844069	30895214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
tx.3098	chr13	-	1231	3	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	4	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAGCATTGTGAAGTA	NA	False	NA	NA	False	NA	NA	NA	31865453	31856417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_31857213_31861404_31861533_31865145
tx.3099	chr13	-	1595	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	114	4	-2	-4	multi-exon	FALSE	canonical	3	65	junction_5	9.43186089804128	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACAGAGTTTGCTGTGTA	NA	False	NA	NA	False	NA	NA	NA	32522609	32003565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
tx.31	chr1	-	1708	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	33	0	33	0	multi-exon	FALSE	canonical	3	23	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATTGTAAAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	14826181	14823569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_14824550_14825453
tx.310	chr1	-	2065	12	FSM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-2	-3	-2	0	multi-exon	FALSE	canonical	3	59	junction_8	12	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTAATTTGGTCACTGG	NA	False	NA	NA	False	NA	NA	NA	90017868	89969853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
tx.3100	chr13	+	2081	7	FSM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	552	0	474	0	multi-exon	FALSE	canonical	3	161	junction_2	20.5081284697881	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTTCTTCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	32986572	33006592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33000466_33004201_33004358_33005021_33005102_33005866
tx.3101	chr13	-	1299	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	4	615	4	-615	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTGTATGTTCAA	4873	False	NA	NA	False	NA	NA	NA	33035164	33026689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
tx.3102	chr13	-	804	3	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	5395	615	0	-615	3prime_fragment	FALSE	canonical	3	149	junction_2	0.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTGTATGTTCAA	4884	False	NA	NA	False	NA	NA	NA	33029773	33026689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_33027206_33029291_33029460_33029653
tx.3103	chr13	+	1865	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	92	1296	-43	-1296	multi-exon	FALSE	canonical	3	32	junction_4	6.66874967458085	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATGGTCTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	33211490	33224571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
tx.3104	chr13	-	1221	6	NIC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-65	6	combination_of_known_splicesites	FALSE	canonical	3	94	junction_5	331.741827329627	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGAGTGTTTTCTAGGA	NA	False	NA	NA	False	NA	NA	NA	34089218	34063792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34089090
tx.3105	chr13	-	1391	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-65	-1	-65	1	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	380	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAACCGAGTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	34089218	34063797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
tx.3106	chr13	-	1321	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	217	9	-3	0	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	330	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8474	False	NA	NA	False	NA	NA	NA	34119964	34101909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
tx.3107	chr13	+	1130	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	-66	-1	-2	1	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGCACTGTATTAGT	NA	False	NA	NA	False	NA	NA	NA	34148667	34169630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
tx.3108	chr13	+	1030	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	16	2796	16	1	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGCACTGTATTAGT	NA	False	NA	NA	False	NA	NA	NA	34148685	34169630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
tx.3109	chr13	+	1220	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	31	2	-4	1	multi-exon	FALSE	canonical	3	157	junction_3	28.0356915377524	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTAGTGTTCCTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	34221610	34258055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
tx.311	chr1	+	2018	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	20	1027	-6	-1027	multi-exon	FALSE	canonical	3	47	junction_1	0	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATGTGTGCTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	90131721	90143446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_90131810_90141516
tx.3110	chr13	-	1709	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	473	0	-473	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCCTCTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	34314337	34311203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
tx.3111	chr13	+	510	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	44	1	44	-1	multi-exon	FALSE	canonical	3	1035	junction_1	31.5	606	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATTTTACTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	34346990	34362155	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_34347233_34350043_34350120_34361963
tx.3112	chr13	-	1456	9	FSM	ENSMUSG00000021416.12	ENSMUST00000021853.12	1347	9	-111	2	-111	-2	multi-exon	TRUE	canonical	2	6	junction_1	1.69096865730859	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATACTGTAAAATTAATA	NA	False	NA	NA	False	NA	NA	NA	35147904	35130598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_35131074_35132054_35132199_35132727_35132818_35136963_35137085_35138064_35138165_35140843_35140914_35143856_35144046_35144383_35144483_35147736
tx.3113	chr13	-	1675	10	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	11	0	combination_of_known_junctions	TRUE	canonical	2	11	junction_9	56.5674512702303	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178094	35161730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177812
tx.3114	chr13	-	1391	10	FSM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	13	-9	3	0	multi-exon	FALSE	canonical	3	29	junction_9	51.0630208542878	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178102	35161730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
tx.3115	chr13	-	1596	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	151	-1	2	0	multi-exon	FALSE	canonical	3	47	junction_9	45.5959170795038	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178113	35161730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
tx.3116	chr13	-	1414	10	FSM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	12	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	38.39206450927	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178115	35161730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
tx.3117	chr13	-	1513	10	NIC	ENSMUSG00000021417.16	novel	1426	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	51.9781530555072	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178116	35161730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177996
tx.3118	chr13	-	1594	10	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	52.8942574306115	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	NA	NA	NA	35178121	35161730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177812
tx.3119	chr13	+	3199	7	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2868	1	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_1	63.2334739060114	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	NA	False	NA	NA	NA	35922427	36058047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
tx.312	chr1	+	1578	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	495	214	0	3	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	594	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCTCTAGAAATTTCAT	NA	False	NA	NA	False	NA	NA	NA	90531197	90540849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
tx.3120	chr13	+	2450	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	90708	1	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	80.650852444348	11	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	NA	False	NA	NA	NA	36037502	36058047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_36037615_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
tx.3121	chr13	-	1035	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	325	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	192.402639041683	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTTGTTTGTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	36089986	36080684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36089945
tx.3122	chr13	-	1148	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	0	3232	0	0	multi-exon	FALSE	canonical	3	464	junction_5	45.6195446836425	429	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	36090342	36080686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
tx.3123	chr13	+	1828	7	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	85	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	85.194711625129	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	36301479	36721567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_36301777_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
tx.3124	chr13	+	1680	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	445	0	-1	0	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	36301839	36721567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
tx.3125	chr13	-	660	2	FSM	ENSMUSG00000099847.2	ENSMUST00000187093.2	354	2	-60	-246	-60	246	multi-exon	FALSE	canonical	3	19	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACCATCTCCTCTGA	NA	False	NA	NA	False	NA	NA	NA	37637244	37635941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_37636445_37637087
tx.3126	chr13	-	2604	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	41	6688	-19	-6688	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	522	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAATATCTAAATTTG	5887	False	NA	NA	False	NA	NA	NA	38178152	38162064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
tx.3127	chr13	+	2480	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	256	2	6	-2	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGTTTGCATTCTTGC	4744	False	NA	NA	False	NA	NA	NA	38221226	38245407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
tx.3128	chr13	+	1184	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	-11	612	-4	73	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAATTGTACACTACACA	NA	False	NA	NA	False	NA	NA	NA	38388909	38411029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
tx.3129	chr13	+	1434	5	ISM	ENSMUSG00000021431.16	ENSMUST00000223557.2	871	6	7	-174	0	174	intron_retention	FALSE	canonical	3	102	junction_4	60.6356949329353	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	38388920	38399580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580
tx.313	chr1	+	2205	13	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	25.9117090649511	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	90981179	91056666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
tx.3130	chr13	-	1504	2	ISM	ENSMUSG00000038991.18	ENSMUST00000160046.2	2781	3	2451	-11	2451	7	3prime_fragment	FALSE	canonical	3	1041	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTTTGCTTAAATG	NA	False	NA	NA	False	NA	NA	NA	38687467	38684241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_38685685_38687406
tx.3131	chr13	-	1749	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	25	3860	8	-3860	multi-exon	FALSE	canonical	3	63	junction_3	8.98262211161084	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATTTGAGATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	38819060	38786676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
tx.3132	chr13	-	1031	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	40	1482	-8	-1482	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	1927	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTGTTATCTTTCC	NA	False	NA	NA	False	NA	NA	NA	38842994	38829664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
tx.3133	chr13	-	1928	10	FSM	ENSMUSG00000021432.16	ENSMUST00000225432.2	2216	10	292	-4	0	0	multi-exon	FALSE	canonical	3	16	junction_6	14.9004929904357	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGTGGGAAGAACTTAC	NA	False	NA	NA	False	NA	NA	NA	39144508	39116111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144407
tx.3134	chr13	-	1571	9	FSM	ENSMUSG00000021432.16	ENSMUST00000224645.2	802	9	-25	-744	0	-26	multi-exon	FALSE	canonical	3	22	junction_7	12.4473892845046	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATTAATAAAATTTGTTA	NA	False	NA	NA	False	NA	NA	NA	39144508	39116141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139796_39139913_39144407
tx.3135	chr13	-	884	3	Genic_Genomic	ENSMUSG00000114672.2	novel	692	1	NA	NA	-6552	1038	multi-exon	FALSE	canonical	0	0	junction_1	2.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACATTGTCTCAAAATT	1836	False	NA	NA	False	NA	NA	NA	41034217	41025935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr13_-_41026420_41027610_41027861_41034067
tx.3136	chr13	-	621	3	Antisense	novelGene_ENSMUSG00000021360.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTCTCAGTGCTTAAT	NA	False	NA	NA	False	NA	NA	NA	41047225	41044513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr13_-_41044870_41045994_41046101_41047066
tx.3137	chr13	+	4013	3	FSM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	25	0	-24	0	multi-exon	FALSE	canonical	3	123	junction_1	29	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	NA	False	NA	NA	NA	41071101	41114368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_41072278_41107051_41107148_41111627
tx.3138	chr13	+	1726	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	-6	2	-6	0	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	468	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGCTTAATTACATTT	NA	False	NA	NA	False	NA	NA	NA	41154492	41166489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
tx.3139	chr13	+	911	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	-1	4	-1	-4	multi-exon	FALSE	canonical	3	613	junction_2	43.7154434954056	677	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	41169766	41176058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
tx.314	chr1	+	3902	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-47	-4	-33	4	multi-exon	TRUE	canonical	3	84	junction_2	27.1317771871533	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGCTTTCTGTAGTG	4217	False	NA	NA	False	NA	NA	NA	91072777	91098521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
tx.3140	chr13	+	1115	11	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-55	-608	multi-exon	FALSE	canonical	2	6	junction_1	9.73087868591526	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTACTTCTCGTACAG	NA	False	NA	NA	False	NA	NA	NA	41306808	41331898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr13_+_41306957_41310909_41310994_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41327933_41330358_41330421_41331657
tx.3141	chr13	-	2244	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	-21	1617	-21	-1499	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCTGAGCAAGGCAATG	7538	False	NA	NA	False	NA	NA	NA	41373902	41337473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
tx.3142	chr13	+	523	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	320	3640	320	-3640	multi-exon	FALSE	canonical	3	181	junction_1	0	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCCATTGCAGATTTCA	NA	False	NA	NA	False	NA	NA	NA	41403639	41426413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_41403791_41426041
tx.3143	chr13	-	1131	7	FSM	ENSMUSG00000058022.15	ENSMUST00000121404.8	1602	7	49	422	-19	3	multi-exon	FALSE	canonical	3	17	junction_6	3.97562014729219	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCTCCTGTTACTTTT	NA	False	NA	NA	False	NA	NA	NA	42001111	41918030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_41918269_41920811_41920964_41930983_41931100_41967690_41967793_41969613_41969749_41981618_41981862_42000966
tx.3144	chr13	-	1182	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	64	0	-32	0	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTGGCCATGATG	NA	False	NA	-113	True	NA	NA	NA	43324896	43305215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
tx.3145	chr13	+	1398	9	FSM	ENSMUSG00000054021.7	ENSMUST00000223194.2	1398	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	63.0811729044411	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	NA	False	NA	NA	False	NA	NA	NA	43518981	43548679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
tx.3146	chr13	+	1472	9	NIC	ENSMUSG00000054021.7	novel	1579	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_8	20.7710736361893	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	NA	False	NA	NA	False	NA	NA	NA	43519103	43548679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
tx.3147	chr13	+	940	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-9	869	-9	-2	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	890	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43551856	43555468	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
tx.3148	chr13	-	1024	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	326	2989	326	317	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAAATGTACTCTCTAC	NA	False	NA	NA	False	NA	NA	NA	43713311	43694857	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
tx.3149	chr13	-	145	2	ISM	ENSMUSG00000021371.6	ENSMUST00000223347.2	579	3	1595	-44	1595	44	3prime_fragment	FALSE	canonical	3	180	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCATTGTTTTGCCAT	NA	False	NA	NA	False	NA	NA	NA	43698001	43695130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_43695206_43697931
tx.315	chr1	+	3294	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-25	-3	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	30.8108945746435	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCAAGACTCCAAGCTG	4225	False	NA	NA	False	NA	NA	NA	91072785	91098012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
tx.3150	chr13	-	1286	10	FSM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	81	-5	-14	1	multi-exon	FALSE	canonical	3	444	junction_2	46.8187996428785	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTGGTGAGTATATGG	NA	False	NA	NA	False	NA	NA	NA	45155542	45075549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
tx.3151	chr13	+	1059	2	ISM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	-4	20081	-4	-19104	5prime_fragment	FALSE	canonical	3	48	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTGTTTTTTTCCT	4391	False	NA	NA	False	NA	NA	NA	45543213	45545417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_45543520_45544664
tx.3152	chr13	+	1586	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	-6	0	-6	0	multi-exon	FALSE	canonical	3	46	junction_4	10.0428768288773	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	False	NA	NA	False	NA	NA	NA	45660913	45699858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
tx.3153	chr13	+	1677	10	NNC	ENSMUSG00000000253.14	novel	1580	9	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	25.8370965001015	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGAGTTTGCGTGTTC	NA	False	NA	NA	False	NA	NA	NA	45660919	45699862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45674602_45674696_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
tx.3154	chr13	+	901	2	Antisense	novelGene_ENSMUSG00000021375.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTGTGTCTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	46966144	46969136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr13_+_46966409_46968499
tx.3155	chr13	-	1034	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	40	1634	-26	2	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTAGCCATGGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	47196646	47178652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
tx.3156	chr13	-	1052	9	NIC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	30.2438010177292	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTAGCCATGGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	47196687	47178652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196602
tx.3157	chr13	-	2578	10	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	313	0	-47	0	3prime_fragment	FALSE	canonical	3	1428	junction_1	93.7092956902645	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	NA	False	NA	NA	NA	47259353	47238257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047
tx.3158	chr13	-	2549	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	7	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_10	113.482333426838	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	NA	False	NA	NA	NA	47259659	47238257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
tx.3159	chr13	+	1211	2	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTGCTTTCCCTGTT	NA	False	NA	NA	False	NA	NA	NA	49121837	49123381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_49122081_49122413
tx.316	chr1	+	3577	14	ISM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	7182	-4	7182	4	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6385039240472	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGCTTTCTGTAGTG	6304	False	NA	NA	False	NA	NA	NA	91080006	91098521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
tx.3160	chr13	+	1170	4	FSM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	21	-4	-19	4	multi-exon	FALSE	canonical	3	352	junction_2	21.013223349966	196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTCCATGTGCCACCCT	NA	False	NA	NA	False	NA	NA	NA	49340981	49349724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_49341114_49347211_49347441_49348369_49348534_49349079
tx.3161	chr13	-	936	5	NIC	ENSMUSG00000037960.12	novel	804	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	362	junction_4	11.146748404804	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	NA	False	NA	NA	NA	49369494	49356425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_49356712_49357193_49357465_49358667_49358822_49361479_49361623_49369412
tx.3162	chr13	-	805	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	0	-1	0	0	multi-exon	FALSE	canonical	3	362	junction_5	10.4115320678563	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	NA	False	NA	NA	NA	49369502	49356425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
tx.3163	chr13	+	2822	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	10	1589	10	-6	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACATCCTATAGAGTTTG	NA	False	NA	NA	False	NA	NA	NA	49574734	49616460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
tx.3164	chr13	-	1053	7	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	68.711959172573	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCTTTGTACAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	49806256	49617495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49803596_49803776_49806058
tx.3165	chr13	-	1137	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	5	2	5	-2	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATAGTGCTTTGTACAG	NA	False	NA	NA	False	NA	NA	NA	49806256	49617500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
tx.3166	chr13	-	964	6	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	81.0668859646157	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATAGTGCTTTGTACAG	NA	False	NA	NA	False	NA	NA	NA	49806261	49617500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49803596_49803776_49806058
tx.3167	chr13	+	834	5	ISM	ENSMUSG00000021392.9	ENSMUST00000222197.2	4368	17	102	20010	77	-67	5prime_fragment	FALSE	canonical	3	140	junction_1	5.53962995154008	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAATCAACAACAG	NA	False	NA	NA	False	NA	NA	NA	49806655	49812204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171
tx.3168	chr13	+	4391	34	FSM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	33	2	3	-2	multi-exon	FALSE	canonical	1	598	junction_17	241.366305222171	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAGTAGTTATTC	NA	False	NA	NA	False	NA	NA	NA	49835608	49887741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
tx.3169	chr13	+	1165	10	ISM	ENSMUSG00000037851.14	ENSMUST00000047363.14	4396	34	14	30897	14	-8411	5prime_fragment	FALSE	canonical	3	1400	junction_1	130.116187395044	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGGAATCTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	49835619	49856846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642
tx.317	chr1	+	1296	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	0	67	0	31	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTGTATTCATTGTA	319	False	NA	NA	False	NA	NA	NA	91178040	91213680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
tx.3170	chr13	+	2382	16	ISM	ENSMUSG00000037851.14	ENSMUST00000164260.8	3789	33	28349	-521	-2114	-5	3prime_fragment	FALSE	canonical	3	1615	junction_1	134.543408938858	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGTTGGAAGTAGTTA	NA	False	NA	NA	False	NA	NA	NA	49869217	49887738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
tx.3171	chr13	+	1803	10	FSM	ENSMUSG00000037816.11	ENSMUST00000046974.5	1798	10	3	-8	3	1	multi-exon	FALSE	canonical	3	14	junction_8	4.29469957557504	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTCCTGCATGAACTTT	NA	False	NA	NA	False	NA	NA	NA	50571902	50587813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
tx.3172	chr13	+	2075	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-375	-2420	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	310.71375894865	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGGTCCATTTGTACA	NA	False	NA	NA	False	NA	NA	NA	51254540	51304110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_51254765_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
tx.3173	chr13	+	1952	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	12	2470	12	-2418	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGTCCATTTGTACACA	NA	False	NA	NA	False	NA	NA	NA	51254927	51304112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
tx.3174	chr13	+	3672	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	120	671	120	-671	multi-exon	FALSE	canonical	3	36	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCCTGGAGGCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	51562794	51576162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_51562982_51572677
tx.3175	chr13	+	609	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	80	3	80	-3	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	1080	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCATTGTTGAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	51799347	51804693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_51799508_51803620_51803749_51804372
tx.3176	chr13	+	3308	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	20	0	20	0	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5514	False	NA	NA	False	NA	NA	NA	51805752	51838080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
tx.3177	chr13	+	1078	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	0	-7	0	7	multi-exon	FALSE	canonical	3	52	junction_3	4.02768199119819	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCCTTTTTATTGAG	NA	False	NA	NA	False	NA	NA	NA	52000713	52002511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
tx.3178	chr13	-	1839	5	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	5	junction_1	1.58113883008419	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTGGGTCATGATGT	8292	False	NA	NA	False	NA	NA	NA	52727310	52708390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_52709757_52709963_52710015_52714215_52714317_52715084_52715256_52727160
tx.3179	chr13	+	775	5	NNC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	41217	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	37.8574629366523	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTCTGAGCCAATTTTT	NA	False	NA	NA	False	NA	NA	NA	52792211	52797651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52797392
tx.318	chr1	+	1259	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	-15	4410	3	0	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGCTTTAATTATTTT	322	False	NA	NA	False	NA	NA	NA	91178043	91213649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
tx.3180	chr13	-	1174	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	146	0	-57	0	multi-exon	FALSE	canonical	3	269	junction_3	77.7090172246741	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTTATACCAAATGT	NA	False	NA	NA	False	NA	NA	NA	53083551	52989154	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
tx.3181	chr13	+	1588	3	Antisense	novelGene_ENSMUSG00000021464.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTATCAGCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	53338479	53340979	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr13_+_53338633_53339455_53339592_53339680
tx.3182	chr13	-	2576	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	30	0	-2	0	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTGTTTGGATAGCAG	1859	False	NA	NA	False	NA	NA	NA	53531403	53486783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
tx.3183	chr13	-	1204	2	FSM	ENSMUSG00000021469.10	ENSMUST00000021922.10	2453	2	242	1007	242	-1007	multi-exon	FALSE	canonical	3	8	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCAGATGTAAAAATTCAA	NA	False	NA	NA	False	NA	NA	NA	53626868	53621926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_53622630_53626367
tx.3184	chr13	+	1223	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	0	1560	0	-1560	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCTGGTAGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	54225887	54260801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
tx.3185	chr13	+	1280	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	9	-1560	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	341.21576509169	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCTGGTAGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	54225896	54260801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
tx.3186	chr13	+	2054	5	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	22043	0	1201	0	3prime_fragment	FALSE	canonical	3	858	junction_3	39.2897887497502	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTCTCTTACTTGTC	NA	False	NA	NA	False	NA	NA	NA	54247930	54262361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
tx.3187	chr13	-	412	2	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTGACTTATACCTGG	NA	False	NA	NA	False	NA	NA	NA	54486598	54485565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_54485816_54486436
tx.3188	chr13	-	1346	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	9	980	9	-980	multi-exon	FALSE	canonical	3	501	junction_3	36.0699320764539	397	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACGGCCCAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	54616653	54607629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
tx.3189	chr13	-	2640	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	85	2	-6	-2	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	12	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTCTGTCTTGTCCATTC	NA	False	NA	NA	False	NA	NA	NA	54713163	54699032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
tx.319	chr1	+	1338	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-43	-185	3	31	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTGTATTCATTGTA	322	False	NA	NA	False	NA	NA	NA	91178043	91213680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
tx.3190	chr13	-	2136	5	FSM	ENSMUSG00000025871.19	ENSMUST00000153708.2	946	5	-17	-1173	-6	0	multi-exon	FALSE	canonical	3	31	junction_4	214.957408572024	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	54713163	54699035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712994
tx.3191	chr13	-	2643	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	79	5	0	0	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	54713169	54699035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
tx.3192	chr13	+	2666	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	15	-1635	15	1635	multi-exon	FALSE	canonical	3	59	junction_3	14.6363322667334	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGAAGTGACTTTACT	2689	False	NA	NA	False	NA	NA	NA	54722842	54730576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
tx.3193	chr13	-	1091	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	16	649	-16	-298	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	550	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACTAGGTGGGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	54737887	54732646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
tx.3194	chr13	+	636	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	3	9	3	-9	multi-exon	FALSE	canonical	3	1416	junction_1	0	647	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGAACTATTTCTTAA	5981	False	NA	NA	False	NA	NA	NA	54738022	54738962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_54738233_54738536
tx.3195	chr13	-	1036	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	1150	0	-13	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	302	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTCAGCGCTCAGTTT	7405	False	NA	NA	False	NA	NA	NA	54759157	54741363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
tx.3196	chr13	+	1821	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	4	119	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	175.481418945317	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCACTGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	54769600	54809518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
tx.3197	chr13	+	2014	12	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	0	111	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	187.610022816365	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGCATCCTTTGCCACT	NA	False	NA	NA	False	NA	NA	NA	54769613	54809510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
tx.3198	chr13	+	1939	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	17	2366	0	111	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGCATCCTTTGCCACT	NA	False	NA	NA	False	NA	NA	NA	54769613	54809510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
tx.3199	chr13	+	1888	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	-23	-117	0	117	multi-exon	FALSE	canonical	3	159	junction_3	87.926617130423	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTTGCCACTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	54769613	54809516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
tx.32	chr1	+	1647	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	0	621	0	-39	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	318	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTTTGTTCTATTCCAT	NA	False	NA	NA	False	NA	NA	NA	15875869	15913655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
tx.320	chr1	+	2186	12	FSM	ENSMUSG00000026307.13	ENSMUST00000027532.13	2202	12	8	8	8	-8	multi-exon	FALSE	canonical	3	51	junction_11	10.6693350656825	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCACCTGCTGAAGTG	NA	False	NA	NA	False	NA	NA	NA	91226067	91248789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
tx.3200	chr13	-	1317	6	FSM	ENSMUSG00000034891.14	ENSMUST00000036825.14	1351	6	34	0	34	0	multi-exon	FALSE	canonical	0	0	junction_2	35.7636687156114	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	54914374	54906672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54914117
tx.3201	chr13	+	1518	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	66	1	-20	0	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	NA	False	NA	NA	NA	54937255	54944588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
tx.3202	chr13	+	1139	9	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_8	99.0959131347	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	NA	False	NA	NA	NA	54937255	54944588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
tx.3203	chr13	+	522	2	FSM	ENSMUSG00000085896.3	ENSMUST00000154615.3	487	2	-35	0	-35	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGGTGAGAGTCAACTT	NA	False	NA	NA	False	NA	NA	NA	55061012	55062292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_55061126_55061883
tx.3204	chr13	-	2498	15	FSM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	31	402	-10	13	multi-exon	FALSE	canonical	0	0	junction_10	39.2030949423795	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATAGATGGAAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	55248077	55176094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
tx.3205	chr13	-	583	4	FSM	ENSMUSG00000025878.17	ENSMUST00000133187.2	2735	4	23	2129	19	192	multi-exon	FALSE	canonical	3	148	junction_3	8.65383665716478	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCATGTTGCTGATT	NA	False	NA	NA	False	NA	NA	NA	55248089	55225077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_55225341_55233422_55233508_55240939_55241095_55248009
tx.3206	chr13	+	915	6	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	91.9469412215545	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTCTTTTTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	55357594	55388662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
tx.3207	chr13	+	862	6	FSM	ENSMUSG00000021488.9	ENSMUST00000224693.2	852	6	-10	0	-5	0	multi-exon	FALSE	canonical	3	16	junction_1	114.325150338847	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTGTCTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	55359877	55388660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_55359921_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
tx.3208	chr13	-	606	3	ISM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	1235	-5	-174	0	3prime_fragment	FALSE	canonical	3	549	junction_1	45	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCACTGGGTGTCAAA	7677	False	NA	NA	False	NA	NA	NA	55468523	55467692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_55468028_55468124_55468188_55468315
tx.3209	chr13	+	1113	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1531	0	12	0	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	2445	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5565	False	NA	NA	False	NA	NA	NA	55469843	55473085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
tx.321	chr1	-	1345	12	FSM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	27	-4	-1	4	multi-exon	FALSE	canonical	3	426	junction_9	38.9197096809944	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGACTGGTCCTGAG	NA	False	NA	NA	False	NA	NA	NA	91326478	91303548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
tx.3210	chr13	-	1345	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	-24	6	-24	-6	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGGAGCGTACAGTCT	6131	False	NA	NA	False	NA	NA	NA	55477595	55472986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
tx.3211	chr13	-	1242	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	164	2909	-8	-149	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	866	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGCCCAGCTGAGA	3003	False	NA	NA	False	NA	NA	NA	55510432	55494554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
tx.3212	chr13	+	1825	10	FSM	ENSMUSG00000052087.15	ENSMUST00000135851.2	1846	10	22	-1	22	0	multi-exon	FALSE	canonical	1	1	junction_3	1.39664500999739	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGAGGTGTGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	55527003	55532500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_55527260_55527392_55527505_55527817_55527931_55528712_55528917_55530657_55530735_55530930_55531058_55531147_55531230_55531337_55531385_55531466_55531582_55531808
tx.3213	chr13	-	1691	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	8	-2	0	-2	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	NA	False	NA	NA	NA	55661251	55646226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
tx.3214	chr13	-	1002	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	4	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	27.1751687376246	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	False	NA	NA	False	NA	NA	NA	55661247	55654585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
tx.3215	chr13	-	2074	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	125	0	-12	0	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	NA	False	NA	NA	NA	55684346	55678228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
tx.3216	chr13	-	814	4	ISM	ENSMUSG00000021495.11	ENSMUST00000224486.2	4786	5	9303	-3	-97	0	3prime_fragment	FALSE	canonical	3	159	junction_3	6.0184900284226	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	NA	False	NA	NA	NA	55690839	55687128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596
tx.3217	chr13	+	1431	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	-11	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	31.3847096529504	436	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740970	55745510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
tx.3218	chr13	+	2136	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	-5	-1	-5	0	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	NA	False	NA	NA	NA	55747872	55758256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
tx.3219	chr13	+	1384	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	2	-4	2	4	multi-exon	FALSE	canonical	3	82	junction_2	4.49691252107735	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTCTGTACATTTTAT	NA	False	NA	NA	False	NA	NA	NA	55770819	55780228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
tx.322	chr1	-	451	3	FSM	ENSMUSG00000026309.15	ENSMUST00000185886.7	606	3	335	-180	335	0	multi-exon	FALSE	canonical	3	489	junction_1	10.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	False	NA	NA	False	NA	NA	NA	91306304	91303552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_91303805_91304039_91304122_91306187
tx.3220	chr13	+	774	4	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	40990	1992	6277	-1992	3prime_fragment	FALSE	canonical	3	370	junction_3	6.37704215656966	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCAGAGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	55823853	55827077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_55823928_55824582_55824728_55825333_55825408_55826596
tx.3221	chr13	+	1487	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	42	-2	42	2	multi-exon	FALSE	canonical	3	237	junction_2	13.4257215820976	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGTGGTTTCGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	55862504	55874042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
tx.3222	chr13	+	553	2	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	44	-5664	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTCTTTTGGATTCA	NA	False	NA	NA	False	NA	NA	NA	55862506	55863275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_55862658_55862873
tx.3223	chr13	+	527	4	FSM	ENSMUSG00000021496.13	ENSMUST00000124968.8	546	4	19	0	19	0	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGTTATTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	55875199	55924643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
tx.3224	chr13	-	1215	5	ISM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	39429	3	-6144	0	3prime_fragment	FALSE	canonical	3	1103	junction_1	94.3159583527623	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	8163	False	NA	NA	False	NA	NA	NA	56244015	56221434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936
tx.3225	chr13	-	1422	6	ISM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	31155	3	-14418	0	3prime_fragment	FALSE	canonical	3	557	junction_5	281.726534071606	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	56252289	56221434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114
tx.3226	chr13	-	1850	9	FSM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	193	3	2	0	multi-exon	FALSE	canonical	3	557	junction_5	233.718279933342	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6098	False	NA	NA	False	NA	NA	NA	56283251	56221434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
tx.3227	chr13	-	1849	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6096	False	NA	NA	False	NA	NA	NA	56283253	56221434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
tx.3228	chr13	+	943	4	FSM	ENSMUSG00000035509.18	ENSMUST00000124981.2	3507	4	-55	2619	-14	0	multi-exon	FALSE	canonical	2	8	junction_3	0.816496580927726	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTCTCACTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	56670270	56675280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_56670436_56671322_56671417_56673454_56673586_56674727
tx.3229	chr13	+	2716	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	-3	1	-1	-1	multi-exon	FALSE	canonical	3	51	junction_1	6.48917367620871	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	9422	False	NA	NA	False	NA	NA	NA	56757395	56787170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
tx.323	chr1	-	1370	13	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	180.948177817726	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	False	NA	NA	False	NA	NA	NA	91326459	91303552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318705_91318754_91318853_91318920_91326372
tx.3230	chr13	+	2323	14	ISM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	15645	1	-871	-1	3prime_fragment	FALSE	canonical	3	54	junction_1	6.19505433590796	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	NA	False	NA	NA	False	NA	NA	NA	56773043	56787170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
tx.3231	chr13	+	1363	5	FSM	ENSMUSG00000021540.17	ENSMUST00000138677.8	1398	5	36	-1	9	1	multi-exon	FALSE	canonical	3	51	junction_1	17.4696164811939	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACTAGTCTTCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	56850887	56881028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662
tx.3232	chr13	+	1173	5	NNC	ENSMUSG00000021540.17	novel	1398	5	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	35.856484769146	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACAACTAGTCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	56850906	56881026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_56850945_56871241_56871810_56875385_56875469_56876322_56876443_56880662
tx.3233	chr13	-	2071	2	ISM	ENSMUSG00000014164.16	ENSMUST00000091583.6	6871	17	93012	3046	93012	-3046	3prime_fragment	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGTTTGTATTGGAAT	NA	False	NA	NA	False	NA	NA	NA	58157230	58151087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_58153019_58157090
tx.3234	chr13	+	715	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	3	744	3	3	multi-exon	FALSE	canonical	3	143	junction_3	23.6220236220354	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	NA	False	NA	NA	NA	58305470	58311763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
tx.3235	chr13	-	1457	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	66	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_5	54.7743681383791	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGATCTTCACTGTC	NA	False	NA	NA	False	NA	NA	NA	58421936	58381159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
tx.3236	chr13	-	1177	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	12	1862	12	-1862	multi-exon	TRUE	canonical	3	402	junction_2	21.2289111041209	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGCACGCCTTTAGT	NA	False	NA	NA	False	NA	NA	NA	58533027	58529492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
tx.3237	chr13	-	1418	3	ISM	ENSMUSG00000021546.19	ENSMUST00000224531.2	514	4	324	-1021	108	1	3prime_fragment	FALSE	canonical	3	4513	junction_1	1062	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	NA	False	NA	NA	False	NA	NA	NA	58541574	58539051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_58540231_58541009_58541180_58541505
tx.3238	chr13	-	1480	3	FSM	ENSMUSG00000021546.19	ENSMUST00000177051.8	874	3	106	-712	106	1	multi-exon	FALSE	canonical	3	5484	junction_1	576.5	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	NA	False	NA	NA	False	NA	NA	NA	58541576	58539051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_58540291_58541009_58541180_58541505
tx.3239	chr13	-	2700	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2345.6966025086	255	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	5131	False	NA	NA	False	NA	NA	NA	58549950	58539051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
tx.324	chr1	-	1318	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	2	15	2	-15	multi-exon	FALSE	canonical	3	93	junction_1	18.4932420089069	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTGTACTGTCATTGA	NA	False	NA	NA	False	NA	NA	NA	91340942	91339219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
tx.3240	chr13	-	2691	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1986.9610217719	336	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4751	False	NA	NA	False	NA	NA	NA	58550330	58539051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
tx.3241	chr13	-	2751	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1931.89781519814	511	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4751	False	NA	NA	False	NA	NA	NA	58550330	58539051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
tx.3242	chr13	+	2541	3	FSM	ENSMUSG00000035367.10	ENSMUST00000225828.2	3594	3	7	1046	7	2	multi-exon	FALSE	canonical	3	21	junction_1	177.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAGAATGTTTATATT	NA	False	NA	NA	False	NA	NA	NA	58550068	58557912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_58550332_58554815_58554905_58555723
tx.3243	chr13	+	3204	4	NNC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-69	-367	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	169.267703817224	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGATATCTTCCATTTAC	NA	False	NA	NA	False	NA	NA	NA	58550444	58558591	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_58550604_58552381_58552470_58554815_58554905_58555723
tx.3244	chr13	+	2464	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	339	1052	-98	0	multi-exon	FALSE	canonical	3	159	junction_1	108.5	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	NA	False	NA	NA	NA	58550415	58557910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_58550604_58554815_58554905_58555723
tx.3245	chr13	+	2533	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-82	-4	-82	0	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	NA	False	NA	NA	NA	58550431	58557910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
tx.3246	chr13	-	779	3	Antisense	novelGene_ENSMUSG00000055254.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	1	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGGTGCACAATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59059827	59056455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr13_-_59056897_59058134_59058376_59059730
tx.3247	chr13	+	3123	6	ISM	ENSMUSG00000021555.16	ENSMUST00000166923.9	779	10	-8	5218	-8	3336	5prime_fragment	FALSE	canonical	3	670	junction_1	88.4655865294522	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATACTAGCAATTTCTG	1301	False	NA	NA	False	NA	NA	NA	59733199	59751413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717
tx.3248	chr13	+	2574	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	93	1126	-6	44	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCCCTGTGGAGAACT	1303	False	NA	NA	False	NA	NA	NA	59733201	59782610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
tx.3249	chr13	+	456	5	ISM	ENSMUSG00000021555.16	ENSMUST00000166923.9	779	10	-3	8980	-3	47	5prime_fragment	FALSE	canonical	3	670	junction_1	98.3234458305851	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTACCTGATTCTT	1306	False	NA	NA	False	NA	NA	NA	59733204	59747651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542
tx.325	chr1	-	1461	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	83	476	-10	-207	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	226	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	92401499	92367207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
tx.3250	chr13	+	1759	18	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	102	7922	3	45	5prime_fragment	FALSE	canonical	3	649	junction_6	72.4765562859651	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGAAAGGTGCTG	1312	False	NA	NA	False	NA	NA	NA	59733210	59775814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691
tx.3251	chr13	+	2267	21	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	6	43	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	180.600629843863	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGCCCTGTGGAGAAC	1315	False	NA	NA	False	NA	NA	NA	59733213	59782609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
tx.3252	chr13	-	3558	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	22	374	-9	-4	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTAGGGTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	59823603	59782813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
tx.3253	chr13	-	649	3	NNC	ENSMUSG00000050876.10	novel	5325	5	NA	NA	-434	-1857	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.5	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTATTTGTATCAGTTT	NA	False	NA	NA	False	NA	NA	NA	59858578	59854420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_59854706_59858067_59858145_59858291
tx.3254	chr13	-	1914	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	23	5	1	0	multi-exon	FALSE	canonical	3	417	junction_3	1.63299316185545	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGGTTCCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	59917601	59903227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
tx.3255	chr13	+	2490	4	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	9.0921211313239	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCCTCCGACTCTCTT	NA	False	NA	NA	False	NA	NA	NA	61765138	61783728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_61765281_61776870_61776998_61779171_61779363_61781698
tx.3256	chr13	+	1272	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-359	-5	289	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	62245556	62260150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
tx.3257	chr13	+	2588	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	-29	-2110	-29	1105	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGCTAATATCTATCCT	NA	False	NA	NA	False	NA	NA	NA	62367340	62385063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
tx.3258	chr13	+	433	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	20	-1	20	1	multi-exon	FALSE	canonical	3	513	junction_2	20.5	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTGCAGGTATCTGAAT	NA	False	NA	NA	False	NA	NA	NA	62411399	62421102	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_62411510_62420579_62420707_62420906
tx.3259	chr13	+	1513	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	20	278	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGGCCCGTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	62411399	62423345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
tx.326	chr1	-	402	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	24	12	24	-12	multi-exon	FALSE	canonical	3	610	junction_1	1	431	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	92569683	92564878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_92565126_92567408_92567482_92569601
tx.3260	chr13	-	1628	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-14	-981	-14	433	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	200	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTGCATATTTGTGT	NA	False	NA	NA	False	NA	NA	NA	62564871	62549873	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
tx.3261	chr13	-	2897	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	2	-407	2	407	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTAAGAAACCTCATAAA	9514	False	NA	NA	False	NA	NA	NA	62614644	62600422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
tx.3262	chr13	-	2250	4	FSM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	-101	-2	0	0	multi-exon	FALSE	canonical	3	36	junction_3	18.9267594221045	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGTGTGGACCAGTCA	NA	False	NA	NA	False	NA	NA	NA	62706426	62664608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62706300
tx.3263	chr13	-	2176	3	FSM	ENSMUSG00000072066.8	ENSMUST00000201563.4	2640	3	-3	467	-3	-467	multi-exon	FALSE	canonical	3	9	junction_2	2	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTTAAAGTTTGCATGTC	NA	False	NA	NA	False	NA	NA	NA	62771999	62751293	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_62753195_62755186_62755314_62771851
tx.3264	chr13	-	2201	5	NNC	ENSMUSG00000072066.8	novel	1457	4	NA	NA	15	-601	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	7.79422863405995	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62771979	62751427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_62753195_62754939_62755001_62755186_62755314_62770760_62770879_62771851
tx.3265	chr13	-	2467	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-27	-1825	0	0	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	62832759	62819597	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
tx.3266	chr13	-	2648	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	15	616	-9	-616	multi-exon	TRUE	canonical	3	25	junction_3	2.05480466765633	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGGACCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	62933607	62920629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
tx.3267	chr13	-	1332	7	FSM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	22	0	22	0	multi-exon	FALSE	canonical	3	121	junction_2	7.5	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTATGGGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	63006214	62984690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_62985095_62988084_62988205_62989599_62989738_62997190_62997332_63001787_63001881_63002717_63002881_63005941
tx.3268	chr13	+	1073	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	-11	-7	-11	5	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTTCTGAATTTGATG	NA	False	NA	NA	False	NA	NA	NA	63387831	63450103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
tx.3269	chr13	+	1496	5	NNC	ENSMUSG00000021458.18	novel	587	3	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	51.3681564785033	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCTGGCCTTGCTTAGA	NA	False	NA	NA	False	NA	NA	NA	63420575	63450691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_63420624_63429955_63430073_63444671_63444759_63446525_63446671_63449592
tx.327	chr1	+	1332	2	FSM	ENSMUSG00000047067.8	ENSMUST00000060913.8	1314	2	-18	0	-18	0	multi-exon	FALSE	canonical	3	9	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGAGTTGCTCTTTATG	2837	False	NA	NA	False	NA	NA	NA	92834684	92836157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_92835146_92835286
tx.3270	chr13	+	1990	5	ISM	ENSMUSG00000021458.18	ENSMUST00000220885.2	894	6	301	-828	-14	0	3prime_fragment	FALSE	canonical	3	17	junction_1	48.7769156466458	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACTCTGGCCTTG	NA	False	NA	NA	False	NA	NA	NA	63420615	63450685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
tx.3271	chr13	+	2036	5	FSM	ENSMUSG00000021458.18	ENSMUST00000223007.2	918	5	-456	-662	-14	-13	multi-exon	FALSE	canonical	2	25	junction_1	45.3231453012696	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCCTGCTCTCAGAAG	NA	False	NA	NA	False	NA	NA	NA	63420615	63450672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
tx.3272	chr13	-	2890	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	2	219	0	-3	multi-exon	TRUE	canonical	3	59	junction_14	18.8014599954148	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATTCAGACCTTCCT	NA	False	NA	NA	False	NA	NA	NA	63579536	63459571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
tx.3273	chr13	-	2127	9	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	35.5773804544404	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTATGGTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	64277182	64244121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64276999
tx.3274	chr13	-	2285	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	12	6	-7	-6	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGACTTGGTTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	64277157	64244127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
tx.3275	chr13	-	1415	11	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	31.977492084277	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCACAGTGTGATATTACA	NA	False	NA	NA	False	NA	NA	NA	64277184	64244956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
tx.3276	chr13	-	1604	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	75	1332	-42	698	multi-exon	TRUE	canonical	3	150	junction_1	21.3672646822189	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGTGGTGAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	64460449	64438942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
tx.3277	chr13	-	1390	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-1	582	-1	-582	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	2902	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	NA	False	NA	NA	NA	64518121	64511609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
tx.3278	chr13	+	1860	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	206	2052	-22	1	multi-exon	TRUE	canonical	3	37	junction_1	3.65892813567591	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	64580333	64587535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
tx.3279	chr13	-	481	4	Genic_Genomic	ENSMUSG00000114031.2	novel	908	1	NA	NA	-5570	-880	multi-exon	FALSE	canonical	3	21	junction_1	83.8821925215491	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATGTGGTAAAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	65632676	65627078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr13_-_65627120_65628564_65628768_65628968_65629055_65632525
tx.328	chr1	+	1306	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-37	-1	-37	1	multi-exon	FALSE	canonical	3	122	junction_1	7.1336448530109	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGGACCTGCTGTGGTT	2613	False	NA	NA	False	NA	NA	NA	92862450	92868695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
tx.3280	chr13	-	1067	3	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_2	64.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGAACCTTTTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	65632669	65627930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_65628768_65628968_65629055_65632525
tx.3281	chr13	-	3162	4	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	22.1560124771785	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65705521	65693382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr13_-_65696241_65697380_65697442_65697641_65697769_65705405
tx.3282	chr13	-	1614	3	FSM	ENSMUSG00000113135.2	ENSMUST00000220469.2	478	3	-21	-1115	-21	1115	multi-exon	FALSE	canonical	3	102	junction_2	85	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGAAAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	65768078	65762522	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_65763903_65764103_65764190_65767930
tx.3283	chr13	+	3247	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	-33	-1689	-33	1321	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261260	66271971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
tx.3284	chr13	-	2660	4	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-16545	1488	multi-exon	FALSE	canonical	3	41	junction_2	29.4542960458327	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	9942	False	NA	NA	False	NA	NA	NA	66391932	66373644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr13_-_66375998_66384209_66384271_66384471_66384599_66391813
tx.3285	chr13	-	360	3	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_2	18.5	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCAGTGTCTATTGTTC	1880	False	NA	NA	False	NA	NA	NA	66439279	66417223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_66417335_66417784_66417928_66439173
tx.3286	chr13	-	2717	4	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7316	967	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1878	False	NA	NA	False	NA	NA	NA	66439281	66427982	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
tx.3287	chr13	+	556	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47306	25	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	22.5	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGCCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	66439389	66453252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_66439588_66448255_66448445_66453083
tx.3288	chr13	+	533	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47355	-4285	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0.5	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGGTCATGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	66439438	66448942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_66439588_66448255_66448445_66448747
tx.3289	chr13	-	589	5	Fusion	ENSMUSG00000074832.12_ENSMUSG00000094499.4	novel	515	5	NA	NA	-7	-19587	multi-exon	FALSE	canonical	3	33	junction_1	68.0661443009665	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCCCTCAGAAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	66589186	66518799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr13_-_66518952_66519399_66519543_66581478_66581540_66581739_66581867_66589080
tx.329	chr1	+	2546	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	363	-7	-27	7	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTGTTCCAAAAAGCCCA	2623	False	NA	NA	False	NA	NA	NA	92862460	92875670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
tx.3290	chr13	-	2820	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-61	-172	-21	172	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66589200	66577778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
tx.3292	chr13	-	1071	3	FSM	ENSMUSG00000097483.3	ENSMUST00000181516.2	1094	3	28	-5	28	5	multi-exon	FALSE	canonical	3	13	junction_1	24	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTTTCTTGAGGTA	NA	False	NA	NA	False	NA	NA	NA	66667559	66651218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_66652035_66653161_66653268_66667410
tx.3293	chr13	-	1143	4	FSM	ENSMUSG00000097483.3	ENSMUST00000180403.3	1519	4	387	-11	23	5	multi-exon	FALSE	canonical	3	52	junction_2	5.09901951359278	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTTTCTTGAGGTA	NA	False	NA	NA	False	NA	NA	NA	66667564	66651218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_66652035_66652807_66652875_66653161_66653268_66667410
tx.3294	chr13	+	465	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	721	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_3	16.3299316185545	50	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	5534	False	NA	NA	False	NA	NA	NA	66711973	66724696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66724529
tx.3295	chr13	+	1073	3	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTTCATTTCTTATT	NA	False	NA	NA	False	NA	NA	NA	66773921	66783678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_66774068_66782550_66782678_66782878
tx.3296	chr13	-	564	3	NNC	ENSMUSG00000074830.5	novel	894	4	NA	NA	-7486	-1907	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_2	39	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTGTATAGTCTCATA	NA	False	NA	NA	False	NA	NA	NA	66828879	66820741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_66821069_66821267_66821395_66828769
tx.3297	chr13	+	1116	4	NNC	ENSMUSG00000114327.2	novel	818	2	NA	NA	-11	115293	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	17.9876500843094	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAACTGTTTTTCTAGA	NA	False	NA	NA	False	NA	NA	NA	66829006	66972314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_66829202_66843359_66843401_66843752_66843820_66971501
tx.3298	chr13	-	2322	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9926	353	intron_retention	FALSE	canonical	3	25	junction_5	11.6961532137708	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTCTGAGATTCCTT	NA	False	NA	NA	False	NA	NA	NA	66846342	66830549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66836256_66836399_66841838_66841917_66846221
tx.3299	chr13	-	592	3	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-11678	-2258	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	69.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	4291	False	NA	NA	False	NA	NA	NA	66901055	66888692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_66889043_66889243_66889330_66900899
tx.33	chr1	-	904	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	259	0	-1	0	multi-exon	FALSE	canonical	3	5309	junction_1	773.772953348289	22106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	16174627	16171518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
tx.330	chr1	+	1811	9	ISM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	6031	-1	-52	1	3prime_fragment	FALSE	canonical	3	87	junction_1	7.88986691902975	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTAGTCTTGTTCCAAAA	2934	False	NA	NA	False	NA	NA	NA	92868128	92875664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
tx.3300	chr13	-	3736	3	NIC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	884	intron_retention	FALSE	canonical	3	157	junction_2	3	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66950624	66939249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_66942763_66942962_66943090_66950528
tx.3301	chr13	-	737	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	-273	0	273	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTAATCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	66950624	66941142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
tx.3302	chr13	-	482	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	53	0	53	0	multi-exon	FALSE	canonical	3	4784	junction_3	381.861231339344	3116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATTATTTGAATTCAA	7765	False	NA	NA	False	NA	NA	NA	67053389	67048680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
tx.3303	chr13	-	1468	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	26	-15	5	15	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	313	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACAATCATTTTTCTCA	403	False	NA	NA	False	NA	NA	NA	67081126	67060166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
tx.3304	chr13	+	2470	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	562	392	-56	-117	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTTTGTTAGAATGAT	8420	False	NA	NA	False	NA	NA	NA	67081455	67146073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
tx.3305	chr13	+	1732	4	NNC	ENSMUSG00000058900.6	novel	2591	4	NA	NA	-55	-836	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_1	9.80929264637478	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTAGAGTCTTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	67321190	67331272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_67321240_67324511_67324639_67325128_67325225_67329812
tx.3306	chr13	+	2602	4	FSM	ENSMUSG00000058900.6	ENSMUST00000021997.8	2591	4	-8	-3	-8	3	multi-exon	FALSE	canonical	1	3	junction_1	10.6144555520604	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTATCTCATCTTATTC	NA	False	NA	NA	False	NA	NA	NA	67321237	67332111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_67321318_67324511_67324639_67325128_67325225_67329812
tx.3307	chr13	+	2679	4	NNC	ENSMUSG00000051037.16	novel	2712	4	NA	NA	215	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1.24721912892465	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCACTTGGGTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	67342813	67357356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_67342876_67346596_67346724_67347212_67347309_67354962
tx.3308	chr13	-	2330	4	FSM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	-8	2355	-8	-2355	multi-exon	FALSE	canonical	3	11	junction_1	6.64997911442	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGACTGTGGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	67508732	67489724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67491722_67493413_67493510_67495906_67496034_67508622
tx.3309	chr13	-	2014	2	ISM	ENSMUSG00000078995.11	ENSMUST00000057070.9	4126	4	3603	1799	3506	-1799	3prime_fragment	FALSE	canonical	2	8	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGTGACTAAATGTC	5831	False	NA	NA	False	NA	NA	NA	67520326	67513501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_67515485_67520295
tx.331	chr1	-	1300	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	45	21	-6	-21	multi-exon	FALSE	canonical	3	72	junction_3	7.36357401145817	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGGGTGCAACCCTTC	NA	False	NA	NA	False	NA	NA	NA	93233592	93228947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
tx.3310	chr13	-	1906	4	FSM	ENSMUSG00000078995.11	ENSMUST00000057070.9	4126	4	15	2205	15	-2205	multi-exon	FALSE	canonical	2	8	junction_1	8.33999733546453	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCTCACTTTTTGTAAA	2243	False	NA	NA	False	NA	NA	NA	67523914	67513907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67515485_67520295_67520392_67520869_67520997_67523808
tx.3311	chr13	-	2033	4	FSM	ENSMUSG00000078994.10	ENSMUST00000224825.2	379	4	-3	-1651	-3	0	multi-exon	TRUE	canonical	1	2	junction_3	15.4128373622625	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTTTGCTTCAAAGC	5196	False	NA	NA	False	NA	NA	NA	67547941	67537422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67539184_67544162_67544259_67544748_67544876_67547892
tx.3312	chr13	-	1485	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	0	1849	0	906	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGTGTGATAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	67569537	67555676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
tx.3313	chr13	-	2338	4	FSM	ENSMUSG00000071291.11	ENSMUST00000076123.12	2391	4	53	0	1	0	multi-exon	FALSE	canonical	3	37	junction_3	4.08248290463863	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCTTTGGTCATGCCA	NA	False	NA	NA	False	NA	NA	NA	67648621	67638286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648489
tx.3314	chr13	-	2634	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	22	0	-9	0	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGTCATAGTGTTTA	9244	False	NA	NA	False	NA	NA	NA	67674274	67663899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
tx.3315	chr13	-	4837	4	FSM	ENSMUSG00000058093.14	ENSMUST00000138725.3	855	4	8	-3990	8	0	multi-exon	FALSE	canonical	3	11	junction_3	22.5437845585479	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGGTGTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	67757798	67737557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757661
tx.3316	chr13	-	3954	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	32	-2883	0	3	multi-exon	TRUE	canonical	3	31	junction_1	3.85861230093008	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATTTTATTTATGAG	NA	False	NA	NA	False	NA	NA	NA	67872413	67853424	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
tx.3317	chr13	+	2997	4	FSM	ENSMUSG00000030446.18	ENSMUST00000181391.8	2399	4	68	-666	-4	666	multi-exon	FALSE	canonical	3	9	junction_1	7.58653778449403	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGTATTTTACATCAAA	NA	False	NA	NA	False	NA	NA	NA	67961926	67975787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_67962016_67970359_67970487_67971218_67971315_67973102
tx.3318	chr13	-	3192	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	0	500	0	83	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTATTGTGTGCGTG	NA	False	NA	NA	False	NA	NA	NA	68730240	68709398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
tx.3319	chr13	-	2625	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	13	83	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	116.868753546684	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTATTGTGTGCGTG	NA	False	NA	NA	False	NA	NA	NA	68730200	68709398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
tx.332	chr1	+	1320	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	782	8213	-19	-8213	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	410	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGAAAGTTATTGTAGC	NA	False	NA	NA	False	NA	NA	NA	93271357	93292998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
tx.3320	chr13	-	2826	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-16	-82	-8	82	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	NA	False	NA	NA	NA	68730248	68709399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
tx.3321	chr13	-	490	3	ISM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-20	18078	-12	31	5prime_fragment	FALSE	canonical	3	370	junction_2	18.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACTATTACATCTATGT	NA	False	NA	NA	False	NA	NA	NA	68730252	68727559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_68727816_68728669_68728835_68730183
tx.3322	chr13	+	2300	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	45.0175891550551	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	68730345	68740401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_68730384_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
tx.3323	chr13	+	2627	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	39.5010548382361	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	68730352	68740401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
tx.3324	chr13	+	2353	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	12	56	-3	3	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	68730378	68740401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
tx.3325	chr13	+	624	3	NNC	ENSMUSG00000021534.9	novel	1826	3	NA	NA	8402	-1	intron_retention	FALSE	canonical	3	9	junction_1	4.5	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTAGCAGCTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	68753959	68761405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_68754010_68759279_68759397_68760948
tx.3326	chr13	-	2683	5	FSM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	-39	0	-39	0	multi-exon	FALSE	canonical	2	14	junction_3	7.15454401062709	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATTGTTTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	69759600	69721567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349_69748517_69759085
tx.3327	chr13	+	2812	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	23	-1	-10	1	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	NA	False	NA	NA	NA	69760157	69782454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
tx.3328	chr13	+	2663	18	FSM	ENSMUSG00000021595.19	ENSMUST00000022087.7	4164	18	56	1445	56	1	multi-exon	FALSE	canonical	3	1529	junction_6	134.755603461822	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	NA	False	NA	NA	NA	69760418	69782454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
tx.3329	chr13	+	1829	11	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	11186	-1	1891	1	3prime_fragment	FALSE	canonical	3	1835	junction_10	96.0937042682818	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	NA	False	NA	NA	NA	69771320	69782454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
tx.333	chr1	+	1198	9	NIC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	-14	-8213	combination_of_known_splicesites	FALSE	canonical	3	27	junction_6	208.918307898087	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGAAAGTTATTGTAGC	NA	False	NA	NA	False	NA	NA	NA	93271362	93292998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93285478_93285584_93288447_93288535_93292611
tx.3330	chr13	+	1654	9	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	15029	-1	-3695	1	3prime_fragment	FALSE	canonical	3	1835	junction_8	105.547382724538	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	2383	False	NA	NA	False	NA	NA	NA	69775163	69782454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
tx.3331	chr13	+	1338	7	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	17616	-1	-1108	1	3prime_fragment	FALSE	canonical	3	1835	junction_6	118.811709112453	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	4970	False	NA	NA	False	NA	NA	NA	69777750	69782454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
tx.3332	chr13	+	889	4	FSM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	22	2	22	2	multi-exon	FALSE	canonical	3	786	junction_3	16.1314048434171	450	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATGTAATTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	69957981	69964221	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_69958172_69959725_69959810_69961822_69961926_69963709
tx.3333	chr13	-	496	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	70	2	-10	-2	multi-exon	FALSE	canonical	3	2374	junction_2	33.95094500403	2122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGAGTTGTTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	73476591	73467994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
tx.3334	chr13	+	1164	3	FSM	ENSMUSG00000021607.10	ENSMUST00000221730.2	717	3	-5	-442	-5	0	multi-exon	FALSE	canonical	3	17	junction_1	303	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGTAGTAGTGTTCT	9278	False	NA	NA	False	NA	NA	NA	73476626	73480297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_73476740_73478978_73479211_73479478
tx.3335	chr13	+	911	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	12	0	12	0	multi-exon	FALSE	canonical	3	623	junction_1	0	278	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGTAGTAGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	73479118	73480297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_73479211_73479478
tx.3336	chr13	+	2308	3	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	39547	-1293	349	-4	3prime_fragment	FALSE	canonical	3	629	junction_2	6	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGGCTCGAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	73659416	73664537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_73659518_73661938_73662081_73662472
tx.3337	chr13	+	3091	9	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	36699	3	-545	-3	3prime_fragment	FALSE	canonical	3	691	junction_1	50.082432049572	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCGTGTGCCTCATTT	4452	False	NA	NA	False	NA	NA	NA	73948514	73964870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
tx.3338	chr13	-	2271	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	17	1111	17	0	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	235	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	NA	False	NA	NA	NA	74085886	74060576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
tx.3339	chr13	+	2465	16	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	34.8873743478768	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATCACCCCGTCCGCT	NA	False	NA	NA	False	NA	NA	NA	74085952	74109008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
tx.334	chr1	+	1238	9	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	3304	8217	2451	-8217	3prime_fragment	FALSE	canonical	3	496	junction_5	61.4715381294465	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGATGAAAGTTATTG	NA	False	NA	NA	False	NA	NA	NA	93273879	93292994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
tx.3340	chr13	+	2423	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	-22	6	5	0	multi-exon	TRUE	canonical	3	92	junction_6	21.3306248280625	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATCACCCCGTCCGCT	NA	False	NA	NA	False	NA	NA	NA	74085934	74109008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
tx.3341	chr13	-	2320	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	74210406	74185750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
tx.3342	chr13	-	2252	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGGTTCACTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	74210402	74185751	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
tx.3343	chr13	-	2507	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	-2	1136	-2	-3	multi-exon	FALSE	canonical	3	27	junction_5	28.6590098045136	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTTCTGGTTCACTCTT	NA	False	NA	NA	False	NA	NA	NA	74210420	74185754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
tx.3344	chr13	-	1653	10	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	15722	2504	14106	7	3prime_fragment	FALSE	canonical	3	206	junction_8	28.8752104369436	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGTGTGATGTCAG	9120	False	NA	NA	False	NA	NA	NA	74341106	74320110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726
tx.3345	chr13	-	2409	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	9	2504	9	7	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGTGTGATGTCAG	7182	False	NA	NA	False	NA	NA	NA	74356819	74320110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
tx.3346	chr13	-	1090	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	33	8	-4	0	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	574	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTAGTTTTGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	74465407	74451635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
tx.3347	chr13	-	1888	8	ISM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	17135	0	-4674	0	3prime_fragment	FALSE	canonical	3	1480	junction_7	167.086315222683	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74481264	74470372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140
tx.3348	chr13	-	2144	10	ISM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	12804	0	2280	0	3prime_fragment	FALSE	canonical	3	1480	junction_7	196.085834065053	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	8372	False	NA	NA	False	NA	NA	NA	74485595	74470372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509
tx.3349	chr13	-	2859	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	41	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	673	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74498358	74470372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
tx.335	chr1	-	3526	10	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	23534	-2071	23534	9	3prime_fragment	FALSE	canonical	3	484	junction_7	63.5163048960999	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGACTCATTTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	93344980	93333652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893
tx.3350	chr13	+	1433	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	20	8106	12	629	multi-exon	FALSE	canonical	3	416	junction_2	9.5	99	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGCTTTTTTTTTTT	4370	False	NA	NA	False	NA	NA	NA	74498447	74505796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_74498528_74500974_74501106_74504574
tx.3351	chr13	-	2622	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	7	1524	7	576	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGATAGCAGATTTTA	NA	False	NA	NA	False	NA	NA	NA	74538948	74518968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
tx.3352	chr13	+	1496	3	ISM	ENSMUSG00000076033.3_ENSMUSG00000062382.10	ENSMUST00000221435.2	491	4	-23	-656	-23	5	intron_retention	FALSE	canonical	3	85	junction_2	7	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGATAACTTTA	1224	False	NA	NA	False	NA	NA	NA	74547789	74555470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_74547912_74553897_74554023_74554221
tx.3353	chr13	+	2804	4	NNC	ENSMUSG00000062382.10	novel	491	4	NA	NA	-23	4381	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_3	24.2532930181083	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTTATTAGATATT	1224	False	NA	NA	False	NA	NA	NA	74547789	74559846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_74547912_74553897_74554023_74554221_74554283_74557350
tx.3354	chr13	-	3444	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	30	-1860	0	1860	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	6499	False	NA	NA	False	NA	NA	NA	74610808	74593530	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
tx.3355	chr13	-	2075	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	0	-526	0	523	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGACTCTCCAGTTAC	NA	False	NA	NA	False	NA	NA	NA	74642111	74627649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
tx.3356	chr13	-	1413	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	-10	3	-10	0	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74642099	74628175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
tx.3357	chr13	-	1530	5	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	-209	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	25.7815340893439	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74642320	74628175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968_74642054_74642157
tx.3358	chr13	-	2006	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	-27	-1584	-27	1584	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	74670607	74656132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
tx.3359	chr13	-	3416	4	ISM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	375	-2774	-7	2584	3prime_fragment	FALSE	canonical	3	33	junction_3	16.8720676464584	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	NA	False	NA	NA	False	NA	NA	NA	74712000	74699444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857
tx.336	chr1	-	4423	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-14	1822	0	0	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	93406537	93335483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
tx.3361	chr13	-	3325	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	238	-2192	-12	0	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5206	False	NA	NA	False	NA	NA	NA	74765441	74753063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
tx.3362	chr13	-	3342	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220929.2	1179	6	29	-2192	29	0	multi-exon	FALSE	canonical	3	7	junction_4	38.8453343401753	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5247	False	NA	NA	False	NA	NA	NA	74765400	74753063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761068_74765320
tx.3364	chr13	-	3837	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220478.2	1989	6	-10	-1838	-10	-2	multi-exon	FALSE	canonical	3	17	junction_3	36.0366480128216	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCATGGTCATGATG	4816	False	NA	NA	False	NA	NA	NA	74765831	74753065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320
tx.3365	chr13	-	1453	12	ISM	ENSMUSG00000021585.11	ENSMUST00000223309.2	1529	17	8768	-418	6475	-2	3prime_fragment	TRUE	canonical	3	116	junction_3	15.6167953665488	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCTACTTTCTTAGGA	NA	False	NA	NA	False	NA	NA	NA	74873582	74842363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482
tx.3366	chr13	-	2781	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	80	1904	-7	16	multi-exon	FALSE	canonical	3	102	junction_28	16.6207701385947	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGAGCATCAATCTCCTT	NA	False	NA	NA	False	NA	NA	NA	74918775	74842390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
tx.3367	chr13	+	388	1	FSM	ENSMUSG00000074800.5	ENSMUST00000099371.5	276	1	-34	-78	-34	78	mono-exon	FALSE	NA	NA	NA	NA	NA	1	0	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCAGGAAATGACTAAT	3129	False	NA	NA	False	NA	NA	NA	75792980	75793368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_75793000_75793400
tx.3368	chr13	+	1305	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	38	2	-4	-2	multi-exon	FALSE	canonical	3	287	junction_1	16	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTTTGTCCGGTTCT	NA	False	NA	NA	False	NA	NA	NA	75988024	75998268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_75988295_75995288_75995418_75997362
tx.3369	chr13	-	1573	4	FSM	ENSMUSG00000043190.15	ENSMUST00000050997.2	2807	4	2	1232	2	0	multi-exon	FALSE	canonical	3	34	junction_3	20.2703943940144	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	76166679	76150885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76165639
tx.337	chr1	-	1113	7	ISM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-50	25016	-36	62	5prime_fragment	FALSE	canonical	3	431	junction_6	30.9914862861113	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACAGTGTGGAGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	93406573	93358677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
tx.3370	chr13	-	612	4	FSM	ENSMUSG00000043190.15	ENSMUST00000167271.9	595	4	-17	0	-17	0	multi-exon	FALSE	canonical	2	9	junction_3	32.0555074137902	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	76166855	76150885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166776
tx.3371	chr13	-	1086	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	103	247	-5	0	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	76166686	76150885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
tx.3372	chr13	-	1883	8	FSM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	80	1694	-19	-1694	multi-exon	TRUE	canonical	3	9	junction_3	7.18558647997674	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAATATGTTGGTACA	9856	False	NA	NA	False	NA	NA	NA	76246699	76210234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76239776_76239937_76242006_76242137_76246492
tx.3373	chr13	+	1975	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	-1	-178	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTCAGTATTTCATT	NA	False	NA	NA	False	NA	NA	NA	76328542	76338047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
tx.3374	chr13	-	3753	21	FSM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	-6	0	-6	0	multi-exon	FALSE	canonical	3	56	junction_14	27.7961777947976	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATAGTCTTTAGTTG	NA	False	NA	NA	False	NA	NA	NA	77283598	77191206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
tx.3375	chr13	-	1037	2	ISM	ENSMUSG00000021597.17	ENSMUST00000162005.2	531	3	779	-880	779	-3	3prime_fragment	FALSE	canonical	3	146	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCATAGTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	77194737	77191209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_77192150_77194640
tx.3376	chr13	+	1717	4	FSM	ENSMUSG00000071252.7	ENSMUST00000225605.2	1539	4	-23	-155	-9	155	multi-exon	FALSE	canonical	3	23	junction_3	17.5562587763516	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGTTATGGTTTTAG	NA	False	NA	NA	False	NA	NA	NA	77283649	77341988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672
tx.3377	chr13	+	631	3	FSM	ENSMUSG00000071252.7	ENSMUST00000225992.2	616	3	-30	15	-19	-15	multi-exon	FALSE	canonical	3	44	junction_1	11	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAAATTTTCTTCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	77283639	77332108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_77283750_77322971_77323104_77331719
tx.3378	chr13	-	1631	7	FSM	ENSMUSG00000069170.15	ENSMUST00000146749.2	1592	7	-38	-1	-25	1	multi-exon	FALSE	canonical	3	24	junction_1	8.51958527942137	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAAAGTGTATATGAC	2332	False	NA	NA	False	NA	NA	NA	81781298	81727158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
tx.3379	chr13	-	749	3	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	53	junction_2	15	68	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTACTTGTGAACTGTT	NA	False	NA	NA	False	NA	NA	NA	81792389	81784029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_81784533_81785816_81786000_81792326
tx.338	chr1	+	3211	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	41	527	12	-527	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	93406726	93437455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
tx.3380	chr13	-	656	3	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	28.5	12	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACTTGTGAACTGT	NA	False	NA	NA	False	NA	NA	NA	81792396	81784030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_-_81784533_81785816_81785901_81792326
tx.3381	chr13	+	2925	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	57	1268	57	419	multi-exon	FALSE	canonical	3	66	junction_2	12	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGATTTCAGGGCAGAAC	346	False	NA	NA	False	NA	NA	NA	81805838	81819722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_81806056_81813123_81813389_81817279
tx.3382	chr13	-	2406	2	ISM	ENSMUSG00000035834.12	ENSMUST00000162535.2	2630	4	9046	-39	9046	2	3prime_fragment	FALSE	canonical	3	257	junction_1	0	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTTGCAGTGAACATT	NA	False	NA	NA	False	NA	NA	NA	81826358	81821959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_81824242_81826234
tx.3383	chr13	-	3042	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	14	-2	3	2	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTTGCAGTGAACATT	NA	False	NA	NA	False	NA	NA	NA	81859118	81821959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
tx.3384	chr13	-	826	3	FSM	ENSMUSG00000035834.12	ENSMUST00000161920.2	733	3	-92	-1	-24	1	multi-exon	FALSE	canonical	3	281	junction_2	6.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCTGTGATTACTGCC	NA	False	NA	NA	False	NA	NA	NA	81859156	81842400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_81842897_81847862_81848013_81858976
tx.3385	chr13	+	934	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	171	121	-30	118	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	1342	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTTTGGTAAATTT	NA	False	NA	NA	False	NA	NA	NA	81931366	81945153	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
tx.3386	chr13	+	2586	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	0	271	0	0	multi-exon	TRUE	canonical	0	0	junction_10	57.0470300398157	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	84370418	84443989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
tx.3387	chr13	+	2548	12	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	69.776028941722	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	84370418	84443989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
tx.3388	chr13	+	1925	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	-59	-811	10	-2	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACCAGTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	85337536	85361840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
tx.3389	chr13	+	1208	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	22	815	-5	-2	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	327	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTTGTGATTGTTT	NA	False	NA	NA	False	NA	NA	NA	85337548	85361027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
tx.339	chr1	+	2095	2	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	27948	0	27948	0	3prime_fragment	FALSE	canonical	3	1012	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	93434730	93437455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_93434805_93435434
tx.3390	chr13	+	1039	9	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	310.456921327259	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTGATTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	85337540	85361030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345649_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
tx.3391	chr13	-	436	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	109	-5	-21	5	multi-exon	FALSE	canonical	3	10515	junction_1	2196	1915	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCGTCTCTGCAATAAG	NA	False	NA	NA	False	NA	NA	NA	86194914	86192929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_86193028_86193845_86193989_86194719
tx.3392	chr13	-	1165	3	ISM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-239	13834	-48	374	5prime_fragment	TRUE	canonical	3	54	junction_2	6.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTACATGGTTTTTA	2558	False	NA	NA	False	NA	NA	NA	89890676	89873178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_89873783_89879577_89879654_89890191
tx.3393	chr13	-	1498	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	49	-7	-23	7	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTAACTGAACTTTT	NA	False	NA	NA	False	NA	NA	NA	90237678	89997032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
tx.3394	chr13	+	1297	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	590	6802	-21	794	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	394	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGCATTTATTAATTA	NA	False	NA	NA	False	NA	NA	NA	90237831	90253574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
tx.3395	chr13	+	539	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	178	220	-81	6	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	1501	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTCTTACTTCCT	NA	False	NA	NA	False	NA	NA	NA	91071254	91072849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
tx.3396	chr13	-	1591	8	FSM	ENSMUSG00000021619.7	ENSMUST00000022119.6	1583	8	-7	-1	-7	1	multi-exon	FALSE	canonical	3	10	junction_7	11.5121940673747	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGACTACTGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	91372094	91083473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91372057
tx.3397	chr13	-	1231	8	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	6073	38	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	7.14856914468389	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAGCAATGGATTATT	4953	False	NA	NA	False	NA	NA	NA	91366005	91083949	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91365852
tx.3398	chr13	+	1736	17	FSM	ENSMUSG00000003992.16	ENSMUST00000004094.15	3957	17	37	2184	-4	9	multi-exon	TRUE	canonical	3	38	junction_13	7.3396930283221	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTGTCTGAAGCAAG	2758	False	NA	NA	False	NA	NA	NA	91609205	91849364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
tx.3399	chr13	-	1446	5	ISM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	1544	0	1500	0	3prime_fragment	FALSE	canonical	3	84	junction_2	32.5451609306207	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	NA	NA	NA	91954280	91944651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869
tx.34	chr1	-	1026	4	NIC	ENSMUSG00000025920.20	novel	1151	5	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	38.8529993122224	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTTGTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	16589491	16529939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_16530644_16533258_16533419_16579565_16579633_16589396
tx.340	chr1	-	2053	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	54	2142	-39	9	multi-exon	TRUE	canonical	3	133	junction_7	20.1461601451751	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCCTGGCCAGACAGGA	NA	False	NA	NA	False	NA	NA	NA	93563390	93549614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
tx.3400	chr13	-	1532	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	9	0	9	0	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	NA	NA	NA	91955815	91944651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
tx.3401	chr13	+	1558	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	420	3369	420	-3369	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTCCTCATCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	92491653	92522192	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
tx.3402	chr13	+	1430	5	NIC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	420	-3381	combination_of_known_splicesites	TRUE	canonical	3	22	junction_4	636.728896391549	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCATTAAAATGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	92491653	92522180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92521232
tx.3403	chr13	-	1852	7	ISM	ENSMUSG00000042118.8	ENSMUST00000015941.8	2467	8	2775	532	2775	-532	3prime_fragment	FALSE	canonical	3	8	junction_1	2.75378527364305	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGCTTGAATGGCATCA	NA	False	NA	NA	False	NA	NA	NA	93808035	93792759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93803081_93803274_93805762_93805855_93807920
tx.3404	chr13	-	1972	8	FSM	ENSMUSG00000042118.8	ENSMUST00000015941.8	2467	8	-40	535	-40	-535	multi-exon	FALSE	canonical	3	8	junction_1	2.60298102261266	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTAGCTTGAATGGCA	NA	False	NA	NA	False	NA	NA	NA	93810850	93792762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93803081_93803274_93805762_93805855_93807920_93808054_93810745
tx.3405	chr13	-	3656	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	480	123	480	-123	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTGTATAATTTTA	NA	False	NA	NA	False	NA	NA	NA	94421857	94337940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
tx.3406	chr13	+	4009	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	11	1	11	-1	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	NA	False	NA	NA	NA	94495478	94702824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
tx.3407	chr13	+	531	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	10	18	10	4	multi-exon	FALSE	canonical	3	1242	junction_3	49.6185449202211	936	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTTTTATACTTTAC	NA	False	NA	NA	False	NA	NA	NA	94925427	94979412	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
tx.3408	chr13	+	1986	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	-91	-1	-91	1	multi-exon	FALSE	canonical	3	65	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	False	NA	NA	False	NA	NA	NA	95461653	95474350	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_95461853_95472563
tx.341	chr1	-	1224	3	ISM	ENSMUSG00000026277.15	ENSMUST00000151068.8	2821	11	-38	6346	-38	-594	5prime_fragment	FALSE	canonical	3	192	junction_1	2	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGCTCACTGTGTAATT	NA	False	NA	NA	False	NA	NA	NA	93563389	93555969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_93556987_93563019_93563106_93563268
tx.3410	chr13	-	1836	9	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	10599	0	10581	0	3prime_fragment	FALSE	canonical	3	209	junction_4	27.1431390962799	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCTTTGTATTTGC	NA	False	NA	NA	False	NA	NA	NA	95501261	95487190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188
tx.3411	chr13	-	2755	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	0	-14	0	14	multi-exon	FALSE	canonical	3	40	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCTTTCAGGCTGTGT	9826	False	NA	NA	False	NA	NA	NA	95661735	95648225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_95650790_95661544
tx.3412	chr13	+	2286	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	29	2868	29	-2317	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGCCTGCCAGTGATT	NA	False	NA	NA	False	NA	NA	NA	96524830	96551377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
tx.3413	chr13	-	1870	3	ISM	ENSMUSG00000021670.15	ENSMUST00000168855.2	1177	6	14865	-1314	905	5	3prime_fragment	FALSE	canonical	3	484	junction_2	30.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	96788406	96785469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_96787142_96787517_96787673_96788363
tx.3414	chr13	-	4389	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	41	-5	-20	5	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	96807403	96785469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
tx.3415	chr13	-	1069	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	63	1568	-1	-8	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	957	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTTAGTTTGGGGCATA	NA	False	NA	NA	False	NA	NA	NA	97274382	97267499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
tx.3416	chr13	+	3125	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	43.0145033680502	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	NA	NA	NA	97274484	97312959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
tx.3417	chr13	+	1659	14	ISM	ENSMUSG00000021666.17	ENSMUST00000161913.8	1829	16	-8	5082	0	507	5prime_fragment	FALSE	canonical	3	138	junction_1	33.7630097651612	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTTATTTACAGTTTT	NA	False	NA	NA	False	NA	NA	NA	97274484	97299917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582
tx.3418	chr13	+	3141	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	16	0	-4	0	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	NA	NA	NA	97274501	97312959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
tx.3419	chr13	-	1794	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	27	84	27	-84	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	1038	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTATCCCTGAATCAA	NA	False	NA	NA	False	NA	NA	NA	97334838	97312922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
tx.342	chr1	+	1509	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	-41	0	-41	0	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGACTCTACTCTGCT	NA	False	NA	NA	False	NA	NA	NA	93613340	93623486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
tx.3420	chr13	+	3339	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	NA	False	NA	NA	NA	97619208	97633515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
tx.3421	chr13	+	2472	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	5	-367	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGATGCAATGTCCTT	NA	False	NA	NA	False	NA	NA	NA	97619213	97633148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
tx.3422	chr13	+	2450	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	46	-361	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	95.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCAATGTCCTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	97619254	97633154	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_97619286_97619456_97619634_97630912
tx.3423	chr13	+	2714	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	50	0	50	0	multi-exon	FALSE	canonical	3	54	junction_2	70.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	NA	False	NA	NA	NA	97619258	97633515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_97619286_97619456_97619541_97630912
tx.3424	chr13	+	2632	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	48	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	NA	False	NA	NA	NA	97619256	97633515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_97619286_97630912
tx.3425	chr13	-	2810	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	49	1261	21	-1261	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGCCGAGGATGTCCT	NA	False	NA	NA	False	NA	NA	NA	98399500	98384613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
tx.3426	chr13	+	1506	8	FSM	ENSMUSG00000021661.17	ENSMUST00000226100.2	1476	8	-30	0	-30	0	multi-exon	FALSE	canonical	3	36	junction_1	57.4651624722247	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	98399616	98410426	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_98399985_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
tx.3427	chr13	+	2405	8	FSM	ENSMUSG00000021661.17	ENSMUST00000123924.8	2328	8	-82	5	-27	-5	multi-exon	TRUE	canonical	3	142	junction_1	24.7839645327212	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCTCTGATTATATGC	NA	False	NA	NA	False	NA	NA	NA	98399619	98410421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
tx.3428	chr13	+	424	2	FSM	ENSMUSG00000021661.17	ENSMUST00000223606.2	1887	2	-45	1508	-27	-1508	multi-exon	FALSE	canonical	3	142	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAATCATGAAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	98399619	98402717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_98399985_98402658
tx.3429	chr13	+	1875	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	-120	0	-17	0	multi-exon	FALSE	canonical	3	142	junction_1	23.3559414282533	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	98399629	98410426	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
tx.343	chr1	-	1515	5	ISM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	4059	3455	-767	0	3prime_fragment	FALSE	canonical	3	370	junction_4	26.4988207284777	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTAGACTGTACAT	NA	False	NA	NA	False	NA	NA	NA	93678443	93633111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568
tx.3430	chr13	-	866	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	22	0	12	0	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	8686	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	NA	False	NA	NA	NA	98453492	98446404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
tx.3431	chr13	-	710	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1174	-5	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	24.5	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATCCTCCTCCATCTTT	NA	False	NA	NA	False	NA	NA	NA	98854192	98849586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_98850076_98852942_98853093_98854121
tx.3432	chr13	-	1622	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1170	-5	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	22.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATCCTCCTCCATCTTT	NA	False	NA	NA	False	NA	NA	NA	98854188	98849586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_98850076_98852942_98853093_98853205
tx.3433	chr13	-	3540	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	3157	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGTTGTACTTCTTA	NA	False	NA	NA	False	NA	NA	NA	99027537	98980408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
tx.3434	chr13	-	3543	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	31	4879	1	3160	multi-exon	TRUE	canonical	3	248	junction_23	63.8650810868555	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTACTTCTTAGAT	NA	False	NA	NA	False	NA	NA	NA	99062861	98980405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
tx.3435	chr13	+	1731	2	FSM	ENSMUSG00000097848.3	ENSMUST00000181742.2	1723	2	-7	-1	-7	1	multi-exon	FALSE	canonical	3	15	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACGACTGGTCTTTAGCT	6933	False	NA	NA	False	NA	NA	NA	99237206	99244089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_99237334_99242485
tx.3436	chr13	-	1697	10	FSM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	7	0	7	0	multi-exon	FALSE	canonical	3	306	junction_5	28.5894740191448	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGTTGTGTTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	99481206	99456154	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
tx.3437	chr13	+	1845	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	4	0	2	0	multi-exon	FALSE	canonical	3	414	junction_10	37.2860563750043	165	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	99481297	99552070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
tx.3438	chr13	-	2140	5	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-23	12702	-23	153	5prime_fragment	FALSE	canonical	3	33	junction_3	7.32717544487642	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAAAGGAGCTGAA	NA	False	NA	NA	False	NA	NA	NA	99653071	99570655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
tx.3439	chr13	+	577	2	NNC	ENSMUSG00000097027.3	novel	2481	2	NA	NA	9	4196	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTATTTGCCCCC	NA	False	NA	NA	False	NA	NA	NA	99653145	99662464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_99653367_99662108
tx.344	chr1	-	1948	6	FSM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	155	3455	25	0	multi-exon	FALSE	canonical	3	370	junction_4	24.3770383763081	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTAGACTGTACAT	NA	False	NA	NA	False	NA	NA	NA	93682347	93633111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
tx.3440	chr13	-	2031	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_3	69.7078725826574	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTTGTTGAGATGGTTA	669	False	NA	NA	False	NA	NA	NA	100152147	100085034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091220_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
tx.3441	chr13	-	2126	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	-2	-1	-2	1	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTGTTGAGAT	667	False	NA	NA	False	NA	NA	NA	100152149	100085039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
tx.3442	chr13	+	553	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	43	5	-30	2	multi-exon	FALSE	canonical	3	69	junction_1	3	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGGTGAATATTATT	NA	False	NA	NA	False	NA	NA	NA	100244562	100250741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_100244738_100245530_100245640_100250472
tx.3443	chr13	+	1200	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	25	-3	-17	3	multi-exon	TRUE	canonical	3	544	junction_6	97.8154352594722	337	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACTTTATAGATATTT	NA	False	NA	NA	False	NA	NA	NA	100261384	100274201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
tx.3444	chr13	-	1571	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-29	114	-11	114	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTATTTTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	100629098	100605201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
tx.3446	chr13	-	3059	7	FSM	ENSMUSG00000021636.16	ENSMUST00000022137.14	3061	7	0	2	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.71404520791032	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGCTCCTTA	NA	False	NA	NA	False	NA	NA	NA	100753479	100732466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753433
tx.3447	chr13	-	2823	17	FSM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	16	0	12	0	multi-exon	FALSE	canonical	3	38	junction_16	42.8397723354128	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	100787543	100753671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787329
tx.3448	chr13	-	2729	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-22	-315	-18	0	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	100787577	100753671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
tx.3449	chr13	+	1218	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	5	-1	5	1	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	290	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	NA	NA	NA	100787855	100792568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_100787954_100790698_100790792_100791541
tx.345	chr1	+	2923	13	NIC	ENSMUSG00000026280.18	novel	513	6	NA	NA	6	-1176	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	90.4551761309926	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTGTGTGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	93679227	93717156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_93679304_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
tx.3450	chr13	+	978	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	372	-52	8	52	multi-exon	FALSE	canonical	3	650	junction_4	426.823734110464	221	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACATGGTCAGTATTGCT	NA	False	NA	NA	False	NA	NA	NA	100787858	100802919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
tx.3451	chr13	+	1246	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	-15	-1	8	0	multi-exon	FALSE	canonical	3	171	junction_1	554	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	NA	NA	NA	100788099	100792568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_100788226_100790698_100790792_100791541
tx.3452	chr13	-	1311	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	10	667	0	12	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	358	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAGAGTACAAGGATAAC	NA	False	NA	NA	False	NA	NA	NA	100867437	100839805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
tx.3453	chr13	-	681	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	16	4	14	-4	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTCCCTTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	100881151	100872466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
tx.3454	chr13	-	1230	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	16	5	16	-5	multi-exon	TRUE	canonical	3	285	junction_6	26.2865816530031	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTTGCAGGACTGGAG	NA	False	NA	NA	False	NA	NA	NA	100912391	100896186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
tx.3455	chr13	-	2340	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	60	89	-24	-7	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	1084	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	NA	False	NA	NA	NA	100923018	100915246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
tx.3456	chr13	-	3863	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	71	0	69	0	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9988	False	NA	NA	False	NA	NA	NA	103911045	103878119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
tx.3457	chr13	-	2564	9	ISM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	69	9737	67	1119	5prime_fragment	FALSE	canonical	3	167	junction_7	26.6760074786314	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAGTGTTCATTGGA	9986	False	NA	NA	False	NA	NA	NA	103911047	103887856	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
tx.3458	chr13	-	1313	6	ISM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	58860	1626	11100	-98	3prime_fragment	FALSE	canonical	3	279	junction_1	19.6672316303032	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTTGATTTTTTTACT	NA	False	NA	NA	False	NA	NA	NA	104187262	104161190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002
tx.3459	chr13	-	2544	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-17	1635	-17	-107	multi-exon	TRUE	canonical	3	279	junction_1	22.4276614920058	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGACTGTAATTTGAT	NA	False	NA	NA	False	NA	NA	NA	104246139	104161199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
tx.346	chr1	+	1682	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	62	2429	-21	2	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGACATGAATTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	93682688	93715903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
tx.3461	chr13	-	2343	6	ISM	ENSMUSG00000021710.12	ENSMUST00000224945.2	2486	12	-61	22200	-33	10113	5prime_fragment	FALSE	canonical	3	279	junction_3	24.5812937006985	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAGGCAAGAATCAG	NA	False	NA	NA	False	NA	NA	NA	104246155	104193918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
tx.3462	chr13	-	888	5	ISM	ENSMUSG00000021711.18	ENSMUST00000179891.2	1689	13	28222	-9	28222	9	3prime_fragment	TRUE	canonical	3	494	junction_2	147.320017309258	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTATTTTCTGTATAT	NA	False	NA	NA	False	NA	NA	NA	104286693	104280452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557
tx.3463	chr13	-	903	6	ISM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	26241	1789	26223	9	3prime_fragment	FALSE	canonical	3	346	junction_5	226.061584529526	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTATTTTCTGTATAT	NA	False	NA	NA	False	NA	NA	NA	104288692	104280452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672
tx.3464	chr13	-	1004	7	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	23508	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	307.134832859374	15	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTATTTTCTGTATAT	NA	False	NA	NA	False	NA	NA	NA	104291407	104280452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344
tx.3465	chr13	-	1716	12	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.911863982044	51	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTATTTTCTGTATAT	NA	False	NA	NA	False	NA	NA	NA	104314941	104280452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
tx.3466	chr13	-	1703	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-8	9	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTATTTTCTGTATAT	NA	False	NA	NA	False	NA	NA	NA	104314941	104280452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
tx.3467	chr13	-	1706	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	36	1796	-8	9	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTATTTTCTGTATAT	NA	False	NA	NA	False	NA	NA	NA	104314941	104280452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
tx.3468	chr13	-	1714	12	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-9	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	249.125412341616	78	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTATTTTCTGTATAT	NA	False	NA	NA	False	NA	NA	NA	104314942	104280452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
tx.3469	chr13	-	1607	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	-1	3	-1	-3	multi-exon	FALSE	canonical	3	68	junction_1	0	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTCTGATTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	104314948	104310232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_104311513_104314621
tx.347	chr1	-	970	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	28	5	0	-5	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	895	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACGAGCTTTGGTTCTG	2338	False	NA	NA	False	NA	NA	NA	93729628	93720302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
tx.3470	chr13	+	3758	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	17	-359	17	4	multi-exon	FALSE	canonical	3	141	junction_1	34.1	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTGTTATTCTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	104315321	104339884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
tx.3471	chr13	-	2370	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	-21	-7	0	7	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCAAATGACTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	104365351	104341624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
tx.3472	chr13	+	1005	10	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	409	junction_5	30.3205101100449	208	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	104365453	104386125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
tx.3473	chr13	-	599	3	ISM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	155566	185	131228	-185	3prime_fragment	FALSE	canonical	3	752	junction_1	56.5	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGCAGATTGCATTAG	NA	False	NA	NA	False	NA	NA	NA	104797895	104767832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_104768247_104794536_104794641_104797814
tx.3474	chr13	-	1865	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	21	185	21	-185	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	336	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGCAGATTGCATTAG	NA	False	NA	NA	False	NA	NA	NA	104953440	104767832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
tx.3475	chr13	+	1731	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	29	605	29	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGTGTCTCTGAGGT	NA	False	NA	NA	False	NA	NA	NA	104953713	104975177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
tx.3476	chr13	+	1440	3	ISM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	15761	603	-1108	2	3prime_fragment	FALSE	canonical	3	138	junction_2	17	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTCTCTGAGGTTT	NA	False	NA	NA	False	NA	NA	NA	104969445	104975179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_104969506_104970755_104970829_104973872
tx.3477	chr13	-	4295	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	30	0	17	0	multi-exon	FALSE	canonical	0	0	junction_13	115.519794104579	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	107073436	106930946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
tx.3478	chr13	-	2634	10	NIC	ENSMUSG00000042590.18	novel	2484	22	NA	NA	29	-30318	intron_retention	FALSE	canonical	3	480	junction_9	34.7662387672968	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTAGCTGTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	107073424	107027480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_-_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
tx.3479	chr13	+	2115	10	FSM	ENSMUSG00000021692.10	ENSMUST00000223870.2	3338	10	-81	1304	-30	-840	multi-exon	TRUE	canonical	3	551	junction_4	41.347966346456	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	NA	False	NA	NA	NA	107083604	107095428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_107083792_107084093_107084168_107085208_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
tx.348	chr1	-	625	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	0	430	0	-430	multi-exon	FALSE	canonical	3	2511	junction_1	0	756	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGGTTTTGTTT	2338	False	NA	NA	False	NA	NA	NA	93729628	93728216	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_93728633_93729419
tx.3480	chr13	+	1243	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-32	840	0	-840	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	400	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	NA	False	NA	NA	NA	107083634	107095428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
tx.3481	chr13	+	1077	11	ISM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	436	840	417	-840	3prime_fragment	FALSE	canonical	3	504	junction_3	47.0604929850931	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	NA	False	NA	NA	NA	107084102	107095428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
tx.3482	chr13	-	1945	4	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	28052	-1538	8414	675	3prime_fragment	FALSE	canonical	3	116	junction_3	16.3571255285137	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAATAATGTACTTCA	NA	False	NA	NA	False	NA	NA	NA	107105212	107097092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145
tx.3483	chr13	-	816	2	Genic_Genomic	ENSMUSG00000049233.8	novel	586	1	NA	NA	-40	298	multi-exon	FALSE	canonical	2	16	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATATTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	107551269	107550345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr13_-_107551121_107551228
tx.3484	chr13	+	1912	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	6	0	2	0	multi-exon	FALSE	canonical	3	97	junction_1	47	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	108180985	108185706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_108181021_108182958_108183103_108183973
tx.3485	chr13	+	2112	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	-13	-2	-10	2	multi-exon	FALSE	canonical	3	27	junction_1	82	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGAGTTTTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	108181009	108185708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_108181243_108182958_108183103_108183973
tx.3486	chr13	+	2028	3	FSM	ENSMUSG00000071180.6	ENSMUST00000226042.2	1092	3	-7	-929	-7	-4	multi-exon	FALSE	canonical	3	16	junction_1	87.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAGGTCCTGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	108181012	108185702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_108181168_108182958_108183103_108183973
tx.3487	chr13	+	1878	2	FSM	ENSMUSG00000071180.6	ENSMUST00000224361.2	830	2	13	-1061	13	0	multi-exon	FALSE	canonical	3	191	junction_1	0	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	108182957	108185706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_108183103_108183973
tx.3488	chr13	+	2111	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTCCTTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	108295271	108331519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
tx.3489	chr13	+	2009	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	7	379	0	0	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTCCTTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	108295271	108331519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
tx.349	chr1	+	850	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	10	3673	-8	40	multi-exon	FALSE	canonical	0	0	junction_4	74.6873756509937	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATAATTCAGTGGCC	NA	False	NA	NA	False	NA	NA	NA	93731696	93746144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
tx.3490	chr13	+	2062	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	15	1936	9	-326	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAATTATGATTGTGTG	NA	False	NA	NA	False	NA	NA	NA	108350952	108420281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
tx.3491	chr13	+	2528	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	16	19	16	-19	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATACTAT	2863	False	NA	NA	False	NA	NA	NA	108452881	108526100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
tx.3492	chr13	-	2910	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	163	226	163	0	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	NA	False	NA	NA	NA	111626399	111562691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
tx.3493	chr13	-	2974	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	244	476	161	2	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTCTTAAAATGTTCAG	NA	False	NA	NA	False	NA	NA	NA	111626401	111562689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
tx.3494	chr13	-	1927	2	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	164	60659	164	-45849	5prime_fragment	FALSE	canonical	3	1177	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTGAAACATCTTAT	NA	False	NA	NA	False	NA	NA	NA	111626398	111623124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_111624905_111626251
tx.3495	chr13	-	464	2	NNC	ENSMUSG00000085634.3	novel	663	2	NA	NA	17519	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	111668926	111658878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_111659245_111668828
tx.3496	chr13	+	952	2	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	12	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCGAAAACCA	253	False	NA	NA	False	NA	NA	NA	111686577	111688704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_111686713_111687887
tx.3497	chr13	+	644	4	FSM	ENSMUSG00000086649.2	ENSMUST00000156236.2	621	4	-6	-17	-6	17	multi-exon	FALSE	canonical	3	14	junction_3	8.73053390247253	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTACAGATTTGGGGT	855	False	NA	NA	False	NA	NA	NA	111716788	111781381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_111716936_111717450_111717511_111778756_111779023_111781210
tx.3498	chr13	+	2293	6	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	10	493	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	158.377523657873	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACGCTCTTCTGCATAG	NA	False	NA	NA	False	NA	NA	NA	112600624	112620643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112619103
tx.3499	chr13	+	1271	6	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	5	-1144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	164.770628450583	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGTTGGATTACTTT	NA	False	NA	NA	False	NA	NA	NA	112600650	112619006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112618462
tx.35	chr1	-	1175	5	FSM	ENSMUSG00000025920.20	ENSMUST00000115359.10	1151	5	-25	1	-15	-1	multi-exon	FALSE	canonical	2	3	junction_1	33.2217925464596	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTTGTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	16589509	16529939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_16530644_16533258_16533419_16556243_16556375_16579565_16579633_16589396
tx.350	chr1	+	3199	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	5	-11	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.736497298245	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATTACATCTCTCC	NA	False	NA	NA	False	NA	NA	NA	93752966	93780059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
tx.3500	chr13	-	2904	22	FSM	ENSMUSG00000021758.15	ENSMUST00000099166.10	3012	22	110	-2	-64	0	multi-exon	FALSE	canonical	3	36	junction_3	9.06389513461723	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCAACAGCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	112788899	112734866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
tx.3501	chr13	+	2253	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	1	6656	1	-6650	multi-exon	TRUE	canonical	3	26	junction_2	7.31122983038101	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAAAAGAAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	112797300	112868627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
tx.3502	chr13	+	1580	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	-65	-243	6	-9	multi-exon	FALSE	canonical	3	38	junction_1	139.137342219837	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGAAGCGTTTGTAGT	9643	False	NA	NA	False	NA	NA	NA	112937331	113004419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
tx.3503	chr13	+	1423	5	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	11	-9	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	115.720298565118	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGAAGCGTTTGTAGT	9648	False	NA	NA	False	NA	NA	NA	112937336	113004419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_112937801_112993279_112993561_112996177_112996236_113003329_113003507_113003976
tx.3504	chr13	+	1574	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	15	9	15	-9	multi-exon	FALSE	canonical	3	199	junction_2	66.7730484551964	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGAAGCGTTTGTAGT	9652	False	NA	NA	False	NA	NA	NA	112937340	113004419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
tx.3505	chr13	-	699	6	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	46376	354	505	83	3prime_fragment	FALSE	canonical	3	630	junction_4	30.5195019618604	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	4464	False	NA	NA	False	NA	NA	NA	113017556	113004305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512
tx.3506	chr13	-	3326	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	9	354	9	83	multi-exon	TRUE	canonical	3	524	junction_21	59.6473487509525	114	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7245	False	NA	NA	False	NA	NA	NA	113063923	113004305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
tx.3507	chr13	+	803	5	ISM	ENSMUSG00000042426.7	ENSMUST00000224176.2	1272	8	181	8500	-13	1052	5prime_fragment	FALSE	canonical	3	291	junction_2	20.0499376557634	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATTTTTTAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	113064168	113069763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617
tx.3508	chr13	+	1093	3	FSM	ENSMUSG00000042426.7	ENSMUST00000223866.2	1736	3	10	633	10	-633	multi-exon	FALSE	canonical	3	291	junction_2	16	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTACTTAAATTATGATA	NA	False	NA	NA	False	NA	NA	NA	113064191	113068078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_113064508_113066160_113066235_113067375
tx.3509	chr13	+	2582	17	ISM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	19720	0	14652	0	3prime_fragment	TRUE	canonical	3	222	junction_2	26.8071090151475	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	113083707	113105966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
tx.351	chr1	+	1981	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	125	6	120	-6	multi-exon	FALSE	canonical	3	133	junction_2	1	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTAAAACAGCGTTCTA	NA	False	NA	NA	False	NA	NA	NA	95241472	95263003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_95241976_95252833_95252969_95261660
tx.3510	chr13	+	1419	9	ISM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	32728	0	27660	0	3prime_fragment	FALSE	canonical	3	258	junction_5	21.095023109729	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	497	False	NA	NA	False	NA	NA	NA	113096715	113105966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
tx.3511	chr13	+	680	4	ISM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	37134	0	32066	0	3prime_fragment	FALSE	canonical	3	305	junction_2	8.9566858950296	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	2768	False	NA	NA	False	NA	NA	NA	113101121	113105966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_113101275_113101748_113101881_113103069_113103167_113105668
tx.3512	chr13	-	1040	3	FSM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	4	-2	4	2	multi-exon	FALSE	canonical	3	23	junction_2	4	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGCATTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	113182940	113179290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_113179834_113181965_113182228_113182705
tx.3513	chr13	+	397	2	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTAATTTCTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	113425108	113426146	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_113425260_113425900
tx.3514	chr13	+	1807	3	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	12	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTAACTTAGTCTGA	1702	False	NA	NA	False	NA	NA	NA	113872381	113876380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_113872828_113872948_113873083_113875153
tx.3515	chr13	+	1512	2	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTAACTTAGTCTGA	1863	False	NA	NA	False	NA	NA	NA	113872542	113876380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_113872828_113875153
tx.3516	chr13	+	1965	2	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTTGTAACTTAGTCT	1663	False	NA	NA	False	NA	NA	NA	113872342	113876378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr13_+_113873083_113875153
tx.3517	chr13	+	1869	4	ISM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	19	188389	19	-186204	5prime_fragment	FALSE	canonical	3	349	junction_1	12.0277457017791	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCATTTATGTTATTACC	NA	False	NA	NA	False	NA	NA	NA	113931059	114105608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117
tx.3518	chr13	-	667	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	178	853	0	0	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	1772	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	114524616	114425183	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
tx.3519	chr13	+	1187	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	12	-6	4	0	multi-exon	TRUE	canonical	3	133	junction_2	16.9844700306551	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	114954783	114965265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
tx.352	chr1	+	1798	8	FSM	ENSMUSG00000026333.15	ENSMUST00000027571.13	2494	8	-36	732	-11	8	multi-exon	FALSE	canonical	3	8	junction_3	17.1939714162035	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATCTGTGACATTGGAA	NA	False	NA	NA	False	NA	NA	NA	97697885	97720702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710918_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
tx.3520	chr13	+	1062	6	FSM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	-8	801	-7	0	multi-exon	FALSE	canonical	3	20	junction_1	59.3450924677011	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	114954786	114965265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_114954860_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
tx.3521	chr13	-	1605	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	85	junction_1	0	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTAGTTCGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	115226727	115224890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_115225498_115225729
tx.3522	chr13	+	2256	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	353	314	-91	-314	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCTTGTGCTGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	117357160	117410637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
tx.3523	chr13	-	518	3	NNC	ENSMUSG00000114736.2	novel	356	3	NA	NA	-15480	152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCTGTATTTGTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	119431561	119408002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr13_-_119408237_119415138_119415302_119431440
tx.3524	chr13	-	1933	4	FSM	ENSMUSG00000025453.19	ENSMUST00000144599.2	1885	4	-201	153	-201	-153	multi-exon	FALSE	canonical	3	169	junction_3	27.3536509852382	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACAGTCTGTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	119545734	119530160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_119531365_119533282_119533513_119541087_119541291_119545438
tx.3525	chr13	+	2378	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-55	-798	-55	-29	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTTGTTTCTTCTAAC	NA	False	NA	NA	False	NA	NA	NA	119565081	119594725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
tx.3526	chr13	+	929	4	FSM	ENSMUSG00000062822.9	ENSMUST00000224081.2	978	4	-10	59	-4	-59	multi-exon	FALSE	canonical	3	42	junction_1	38.4389848403357	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCAGATGTGGAAATTT	NA	False	NA	NA	False	NA	NA	NA	119599299	119606302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050
tx.3527	chr13	+	2566	13	FSM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	-1	0	-1	0	multi-exon	TRUE	canonical	3	76	junction_1	23.5189049253763	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	NA	False	NA	NA	NA	119599302	119622653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
tx.3528	chr13	+	1025	4	ISM	ENSMUSG00000062822.9	ENSMUST00000225726.2	2795	13	0	16306	0	-14	5prime_fragment	FALSE	canonical	3	76	junction_1	22.7596133534821	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACGAACCTCCTTACCA	NA	False	NA	NA	False	NA	NA	NA	119599311	119606347	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050
tx.3529	chr13	+	2471	13	NIC	ENSMUSG00000062822.9	novel	2627	14	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	29.2546292633035	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTCATTTCTTACATCA	NA	False	NA	NA	False	NA	NA	NA	119599337	119622656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
tx.353	chr1	+	1934	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	0	112	0	-112	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTACTACATTTTCTC	NA	False	NA	NA	False	NA	NA	NA	97697896	97720582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
tx.3530	chr13	+	3356	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	-70	178	15	0	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	120151929	120169618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
tx.3531	chr13	+	3283	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	-38	0	29	0	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	120151943	120169618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
tx.3532	chr13	-	2892	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	0	74	0	-73	multi-exon	FALSE	canonical	3	32	junction_7	48.3110668861025	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	NA	False	NA	NA	NA	120252342	120226796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
tx.3533	chr14	+	267	2	ISM	ENSMUSG00000058317.13	ENSMUST00000176062.3	647	5	26	249811	-22	-1899	5prime_fragment	FALSE	canonical	3	139	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCAGCCGTTGTTAGCA	NA	False	NA	NA	False	NA	NA	NA	3576028	3581430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_3576112_3581246
tx.3534	chr14	+	315	3	ISM	ENSMUSG00000058317.13	ENSMUST00000176062.3	647	5	29	233039	-19	14873	5prime_fragment	FALSE	canonical	3	139	junction_1	13	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTTCGGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	3576031	3598202	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_3576112_3581246_3581431_3598151
tx.3535	chr14	+	447	3	ISM	ENSMUSG00000058317.13	ENSMUST00000151926.8	666	5	-24	284605	-24	14874	5prime_fragment	FALSE	canonical	3	30	junction_1	67.5	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACTTCGGTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	3576257	3598203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_3576469_3581246_3581431_3598151
tx.3536	chr14	+	1098	3	ISM	ENSMUSG00000058317.13	ENSMUST00000175643.8	757	6	257864	-464	-33192	0	3prime_fragment	FALSE	canonical	3	197	junction_2	14	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCTGTACCAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	3839262	3896119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_3839398_3882697_3882846_3895304
tx.3537	chr14	+	1383	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	20	5	20	-5	multi-exon	FALSE	canonical	3	247	junction_1	27.2073519475895	255	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGACCCTGCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	4137856	4186969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
tx.3538	chr14	+	1219	5	ISM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	736	5	-26	-5	3prime_fragment	FALSE	canonical	3	290	junction_4	13.9014387744578	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGACCCTGCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	4138572	4186969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
tx.3539	chr14	-	1184	5	FSM	ENSMUSG00000021772.16	ENSMUST00000022294.15	1199	5	21	-6	10	6	multi-exon	FALSE	canonical	1	3	junction_3	46.4885738649832	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGGAACTCTTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	4198448	4189252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_4189750_4191150_4191393_4191594_4191853_4192889_4193001_4198372
tx.354	chr1	+	935	2	FSM	ENSMUSG00000026319.14	ENSMUST00000191150.2	874	2	-60	-1	-6	1	multi-exon	FALSE	canonical	3	51	junction_1	0	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTCTGCTTCATAGAA	NA	False	NA	NA	False	NA	NA	NA	105591601	105592876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_105592359_105592698
tx.3540	chr14	-	1009	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	29	3560	-21	6	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGGAACTCTTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	4198531	4189252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
tx.3541	chr14	+	1865	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	45	12	7	-12	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	3220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAAGTGGACCTATGTT	NA	False	NA	NA	False	NA	NA	NA	4198673	4201861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
tx.3542	chr14	+	836	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	47	0	-12	0	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	1248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	4198713	4200736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
tx.3543	chr14	+	813	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	877	junction_1	6301.70655898508	541	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	4198714	4200736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
tx.3544	chr14	-	2722	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	36	177	-11	-177	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTTGTATGAGAAGATT	NA	False	NA	NA	False	NA	NA	NA	6220447	6158013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
tx.3545	chr14	+	1506	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	-8	1936	-8	-77	multi-exon	FALSE	canonical	3	8	junction_1	6.5	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTTATATCAATAT	NA	False	NA	NA	False	NA	NA	NA	6226423	6229140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_6226474_6226964_6227973_6228692
tx.3546	chr14	-	3274	22	ISM	ENSMUSG00000021733.12	ENSMUST00000226079.3	3594	24	-21	9896	-7	12	5prime_fragment	TRUE	canonical	3	66	junction_16	12.0328348964929	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAGGTAAAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	7766705	7683348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
tx.3547	chr14	-	1317	6	ISM	ENSMUSG00000021733.12	ENSMUST00000225496.2	3025	19	42	35214	-1	-5975	5prime_fragment	FALSE	canonical	3	74	junction_3	11.3490087672889	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCACATTTGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	7766696	7729464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
tx.3548	chr14	+	701	3	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	7.5	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	6830	False	NA	NA	False	NA	NA	NA	8013426	8018481	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr14_+_8013751_8017395_8017543_8018251
tx.3549	chr14	-	708	5	NIC	ENSMUSG00000068758.9	novel	1128	10	NA	NA	348	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	12.5	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	NA	False	NA	NA	NA	8119794	8114269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8119495
tx.355	chr1	-	402	3	FSM	ENSMUSG00000099843.2	ENSMUST00000185535.2	471	3	-1	70	-1	-70	multi-exon	FALSE	canonical	2	5	junction_1	0.5	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTTAGTCTGTTCAC	NA	False	NA	NA	False	NA	NA	NA	105918013	105907149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_105907355_105916748_105916834_105917901
tx.3550	chr14	-	1303	11	NIC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	9.8974744253269	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	NA	False	NA	NA	NA	8123353	8114269	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8123250
tx.3551	chr14	+	1337	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	39	11	-12	-11	multi-exon	FALSE	canonical	3	1151	junction_1	36.7689975886408	1153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTAATTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	8348817	8357578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
tx.3552	chr14	+	896	8	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	208	junction_2	184.198207352397	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	8508497	8520749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_8508579_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.3553	chr14	+	922	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	13	2	-4	0	multi-exon	FALSE	canonical	3	370	junction_1	118.776758531907	283	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	8508498	8520749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.3554	chr14	+	982	9	FSM	ENSMUSG00000053453.10	ENSMUST00000225401.2	951	9	-29	-2	-10	0	multi-exon	FALSE	canonical	3	34	junction_2	279.504472236134	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	NA	False	NA	NA	NA	8508518	8520751	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_8508579_8512131_8512210_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.3555	chr14	+	1035	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	287.160125191504	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	8508537	8520749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_8508579_8512131_8512284_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.3556	chr14	+	1001	8	NIC	ENSMUSG00000053453.10	novel	707	6	NA	NA	134	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	230.414976128918	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	8508736	8520749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_8508896_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
tx.3557	chr14	-	1763	6	FSM	ENSMUSG00000033111.17	ENSMUST00000112669.10	2477	6	15	699	-2	-305	multi-exon	FALSE	canonical	3	8	junction_2	65.4785461048121	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGATGACAATTTCATCT	NA	False	NA	NA	False	NA	NA	NA	10185539	10167230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_10168616_10169980_10170042_10172106_10172182_10182369_10182494_10184294_10184379_10185505
tx.3558	chr14	-	978	7	NIC	ENSMUSG00000033111.17	novel	900	6	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	67.1501220318243	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGAGTCTCCAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	10185522	10167775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_10168192_10168274_10168365_10168516_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185429
tx.3559	chr14	-	1195	5	FSM	ENSMUSG00000033111.17	ENSMUST00000225294.2	1191	5	-4	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	54.4196655631032	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGCCCTCTTGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	10185509	10167783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185429
tx.356	chr1	-	1544	5	ISM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	15907	3441	15863	-3441	3prime_fragment	FALSE	canonical	3	165	junction_2	17.1099386322687	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTCTTACTCTCAGAG	NA	False	NA	NA	False	NA	NA	NA	106671550	106651629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398
tx.3560	chr14	-	1164	5	FSM	ENSMUSG00000033111.17	ENSMUST00000223762.2	2292	5	-9	1137	4	1	multi-exon	FALSE	canonical	3	15	junction_4	58.5683361552981	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAGTCTCCAGTTCC	NA	False	NA	NA	False	NA	NA	NA	10185550	10167776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185505
tx.3561	chr14	-	1160	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	40	1252	4	0	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGCCCTCTTGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	10185550	10167783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
tx.3562	chr14	+	209	2	ISM	ENSMUSG00000060579.14	ENSMUST00000161302.8	860	7	0	871403	0	-551388	5prime_fragment	FALSE	canonical	3	14	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCCTTTTCTGTAAAAGA	NA	False	NA	NA	False	NA	NA	NA	12016314	12048278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_12016405_12048159
tx.3563	chr14	+	986	4	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-49	141558	-48	-141558	5prime_fragment	FALSE	canonical	3	157	junction_2	15.5134350376268	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTTAGTCAGTTGAAC	NA	False	NA	NA	False	NA	NA	NA	13803484	13825794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303
tx.3564	chr14	+	2713	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-32	0	-32	0	multi-exon	FALSE	canonical	3	111	junction_15	21.4813614300605	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTGCTTCCTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	13803500	14038581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
tx.3565	chr14	-	1590	4	NNC	ENSMUSG00000021752.15	novel	1650	3	NA	NA	170	7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	100.784699015057	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTATTTATTGCTATAT	NA	False	NA	NA	False	NA	NA	NA	14255463	14246202	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_14247587_14249552_14249623_14253664_14253768_14255430
tx.3566	chr14	+	1450	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	63	0	0	0	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	1596	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	NA	NA	NA	14296810	14303777	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
tx.3567	chr14	-	2198	5	ISM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	3400	-2	3400	2	3prime_fragment	FALSE	canonical	3	219	junction_4	7.58287544405155	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTATATACCTTTA	NA	False	NA	NA	False	NA	NA	NA	14386006	14377936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978
tx.3568	chr14	-	2016	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-35	420	-35	-420	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAATTTCTCTGTAACTT	NA	False	NA	NA	False	NA	NA	NA	14389441	14378358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
tx.3569	chr14	-	1210	6	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	156	30	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	87.8621647809795	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGCTCTTATTATCAAA	NA	False	NA	NA	False	NA	NA	NA	14389250	14379188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389045
tx.357	chr1	-	2061	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	16	3441	-12	-3441	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTCTTACTCTCAGAG	8277	False	NA	NA	False	NA	NA	NA	106687441	106651629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
tx.3570	chr14	-	2224	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	3	-1	3	1	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGCAACACCCAGGTAC	NA	False	NA	NA	False	NA	NA	NA	14466868	14413008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
tx.3571	chr14	-	1335	8	FSM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	-10	633	7	-633	multi-exon	FALSE	canonical	3	7	junction_7	23.7589940005541	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGTTGCTTCCGATGT	NA	False	NA	NA	False	NA	NA	NA	14466864	14413740	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14466809
tx.3572	chr14	+	1499	3	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90251	-9931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACAGAATGTATTGTTC	6817	False	NA	NA	False	NA	NA	NA	14810955	14914691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_14811253_14907121_14907273_14913640
tx.3573	chr14	+	943	5	FSM	ENSMUSG00000094021.8	ENSMUST00000169215.8	984	5	55	-14	55	14	multi-exon	FALSE	canonical	0	0	junction_3	8	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	NA	NA	NA	15424857	15433252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_15424996_15425726_15425890_15426844_15426977_15427652_15427837_15432926
tx.3574	chr14	+	1616	4	NNC	ENSMUSG00000090691.4	novel	2053	7	NA	NA	-156	-9033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.0855260988773	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACAGAATGTATTGTTC	NA	False	NA	NA	False	NA	NA	NA	15579654	15592238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_15579954_15581334_15581449_15584666_15584818_15591186
tx.3575	chr14	+	2466	8	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14990	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.16292440618547	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTATGCTTCAGCTTT	NA	False	NA	NA	False	NA	NA	NA	16042300	16063948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16057290_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
tx.3576	chr14	+	1909	5	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14833	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.6624340560681	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTATGCTTCAGCTTT	NA	False	NA	NA	False	NA	NA	NA	16042457	16063948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_16042755_16058159_16058323_16059272_16059405_16060080_16060263_16062813
tx.3577	chr14	+	1987	7	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14648	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.46337971105226	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	NA	NA	NA	16042642	16063946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16058159_16058323_16059272_16059405_16060080_16060263_16062813
tx.3578	chr14	-	2097	8	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-5	1059	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.6961751699056	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTATGCTTCAGCTTT	NA	False	NA	NA	False	NA	NA	NA	17614202	17592862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17612629_17612744_17614118
tx.3579	chr14	-	1962	7	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-5	1059	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3284303119776	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTATGCTTCAGCTTT	NA	False	NA	NA	False	NA	NA	NA	17614202	17592862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17609286_17609438_17612629_17612744_17614118
tx.358	chr1	-	2851	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	55	1727	-6	-1727	multi-exon	TRUE	canonical	3	455	junction_4	35.0793386482699	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTTTTATATGTTT	79	False	NA	NA	False	NA	NA	NA	106724403	106698886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
tx.3580	chr14	-	1962	7	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	14	1057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3284303119776	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	NA	NA	NA	17614183	17592864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17614118
tx.3582	chr14	-	1721	5	Fusion	ENSMUSG00000095195.8_ENSMUSG00000096488.2	novel	1955	7	NA	NA	5	0	multi-exon	FALSE	canonical	0	0	junction_3	1.6393596310755	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	NA	NA	NA	19057154	18875552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr14_-_18876696_18880194_18880378_18881053_18881186_18882135_18882299_19057054
tx.3583	chr14	-	2098	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	NA	NA	NA	19137138	19114973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19132241_19132393_19135569_19135684_19137061
tx.3584	chr14	-	1755	5	NIC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.6393596310755	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	NA	NA	NA	19137195	19114973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19137061
tx.3585	chr14	-	2186	7	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-215	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.46249406456535	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	NA	NA	NA	19137361	19114973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19132241_19132393_19135569_19135684_19137061
tx.3586	chr14	+	4866	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	10	0	-9	0	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	NA	False	NA	NA	NA	19801342	19861855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
tx.3587	chr14	+	2398	5	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	0	-35429	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	630.287434429721	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTGGTACAGATGTG	NA	False	NA	NA	False	NA	NA	NA	19801351	19820769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19819923
tx.3588	chr14	+	3621	18	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	17356	1	384	-1	3prime_fragment	FALSE	canonical	3	1309	junction_11	128.366446693356	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	7404	False	NA	NA	False	NA	NA	NA	19818688	19861854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
tx.3589	chr14	+	716	2	ISM	ENSMUSG00000021806.5	ENSMUST00000224263.2	4105	19	42716	0	5717	0	3prime_fragment	FALSE	canonical	3	1731	junction_1	0	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	NA	False	NA	NA	NA	19861020	19861855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_19861135_19861253
tx.359	chr1	-	959	6	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	39	286	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	401.095799030606	13	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTTTTTTTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	118238927	118228332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238790
tx.3590	chr14	-	985	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	11	566	11	-566	multi-exon	FALSE	canonical	3	1848	junction_5	420.22365279378	1390	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1699	False	NA	NA	False	NA	NA	NA	19873881	19861984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
tx.3591	chr14	-	689	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	231	2906	41	190	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACATTCTGGTAATGAG	NA	False	NA	NA	False	NA	NA	NA	20027086	19925532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
tx.3592	chr14	-	771	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	57	1487	57	337	multi-exon	FALSE	canonical	3	53	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGGTTTGTCTCATTA	5362	False	NA	NA	False	NA	NA	NA	20133194	20127190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_20127713_20132945
tx.3593	chr14	+	1710	9	FSM	ENSMUSG00000021809.11	ENSMUST00000022343.6	2494	9	-32	816	-7	0	multi-exon	FALSE	canonical	2	6	junction_1	3.70809924354783	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTGTGAAGGTATATTTT	NA	False	NA	NA	False	NA	NA	NA	20344757	20366830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
tx.3594	chr14	+	2831	11	NIC	ENSMUSG00000021809.11	novel	1589	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	5.35163526410386	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGACTCTTTTCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	20344763	20367646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_20344861_20345155_20345335_20350654_20350748_20354020_20354161_20356299_20356435_20357300_20357433_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
tx.3595	chr14	-	2691	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	37	404	-14	-404	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTCAGTCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	20398152	20370323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
tx.3596	chr14	+	1553	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	-10	497	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	78.3207436691512	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAATATGTTCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	20398317	20418632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20417913
tx.3597	chr14	-	1377	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	33	221	-1	-221	multi-exon	TRUE	canonical	3	896	junction_2	62.1711347813437	383	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGTGGATTATTTAAAT	NA	False	NA	NA	False	NA	NA	NA	20438945	20434926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
tx.3598	chr14	-	647	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	6	1919	6	4	multi-exon	TRUE	canonical	3	1591	junction_2	40	771	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTCCTCTGGCATAGCCTG	8533	False	NA	NA	False	NA	NA	NA	20443696	20441290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_20441529_20441960_20442222_20443548
tx.3599	chr14	-	1608	4	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	19501	4	-1241	-4	3prime_fragment	FALSE	canonical	3	899	junction_3	71.7232334897293	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTCTTTTGACCTAG	NA	False	NA	NA	False	NA	NA	NA	20510478	20505348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380
tx.36	chr1	-	1899	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCTCTGTTTCTATGA	NA	False	NA	NA	False	NA	NA	NA	16689515	16640010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
tx.360	chr1	-	1130	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	219	5714	39	397	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	1064	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTGTTGATGTACTGA	NA	False	NA	NA	False	NA	NA	NA	118238927	118228221	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
tx.3600	chr14	-	1804	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	32	891	29	361	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8232	False	NA	NA	False	NA	NA	NA	20529947	20506235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
tx.3601	chr14	-	1761	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	182	908	-10	361	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8160	False	NA	NA	False	NA	NA	NA	20530019	20506235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
tx.3602	chr14	-	2142	11	ISM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	14788	7794	-7716	9	internal_fragment	FALSE	canonical	3	105	junction_2	33.4640105187648	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTCGTTGAATATTTT	NA	False	NA	NA	False	NA	NA	NA	20581827	20557729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727
tx.3603	chr14	+	2213	3	FSM	ENSMUSG00000039367.12	ENSMUST00000224061.2	605	3	9	-1617	-4	-1246	multi-exon	FALSE	canonical	3	348	junction_1	29.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAGCAAAGACTATACCT	NA	False	NA	NA	False	NA	NA	NA	20724399	20731551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_20724457_20726025_20726226_20729595
tx.3604	chr14	+	4450	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	9	2	-6	0	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	NA	False	NA	NA	NA	20724384	20744918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
tx.3605	chr14	-	1565	3	FSM	ENSMUSG00000097577.3	ENSMUST00000180987.2	1554	3	-8	-3	-8	3	multi-exon	FALSE	canonical	2	8	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTAGGCTCTGGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	20753088	20737300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_20738682_20738832_20738908_20752979
tx.3606	chr14	+	1885	6	ISM	ENSMUSG00000039367.12	ENSMUST00000223751.2	4196	24	17395	-2	58	0	3prime_fragment	FALSE	canonical	3	336	junction_3	25.1841219819155	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	NA	False	NA	NA	NA	20741805	20744920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
tx.3607	chr14	+	569	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	47	0	-5	0	multi-exon	FALSE	canonical	3	1953	junction_1	51.5	1017	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	20753120	20754493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_20753266_20753357_20753477_20754188
tx.3608	chr14	-	1806	19	FSM	ENSMUSG00000021820.19	ENSMUST00000100837.11	3564	19	-2	1760	1	-8	multi-exon	FALSE	canonical	3	16	junction_6	6.2610396328366	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAAGATTGTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	20844121	20786702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
tx.3609	chr14	+	489	2	FSM	ENSMUSG00000114241.2	ENSMUST00000224276.2	449	2	-41	1	-41	-1	multi-exon	FALSE	canonical	2	3	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGCCTCCATTTTTCT	1027	False	NA	NA	False	NA	NA	NA	20844265	20846627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_20844529_20846401
tx.361	chr1	+	1651	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	6	232	6	-232	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	336	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTTCCTTTTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	118249574	118261320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
tx.3610	chr14	-	2675	7	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-11	1207	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	106.531163932855	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	NA	False	NA	NA	NA	21102274	21084874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102207
tx.3611	chr14	-	3115	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	244	3373	-11	1199	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAAATGATTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	21102274	21084882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
tx.3612	chr14	+	977	8	NIC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	129.691313258421	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTCTTCCCAACTA	NA	False	NA	NA	False	NA	NA	NA	21102654	21376861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21376659
tx.3613	chr14	+	1764	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	18	0	18	0	multi-exon	FALSE	canonical	3	304	junction_9	34.7499640287584	363	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTGTCTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	21102659	21498637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
tx.3614	chr14	+	306	2	FSM	ENSMUSG00000039197.11	ENSMUST00000223558.2	289	2	-12	-5	-12	5	multi-exon	FALSE	canonical	3	60	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATCCATTTTAACAGT	NA	False	NA	NA	False	NA	NA	NA	21102666	21103993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_21102769_21103789
tx.3615	chr14	+	1243	8	NNC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	4	-626	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	132.803675877329	14	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGCACTAATCATTGAC	NA	False	NA	NA	False	NA	NA	NA	21102645	21369104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21368645
tx.3616	chr14	+	1614	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCCCAGGCTCCTG	2630	False	NA	NA	False	NA	NA	NA	21800614	21843370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
tx.3617	chr14	+	1555	6	FSM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	19	0	2	0	multi-exon	FALSE	canonical	3	20	junction_1	7.55248303539968	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCCCAGGCTCCTG	2633	False	NA	NA	False	NA	NA	NA	21800617	21843370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
tx.3618	chr14	+	1516	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	253	185	-44	175	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	2325	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAATGGCTCACGTATG	NA	False	NA	NA	False	NA	NA	NA	21881589	21895762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
tx.3619	chr14	-	928	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	62	1324	-21	0	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	333	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	21898983	21897246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
tx.362	chr1	+	3090	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	-1	6180	0	-6180	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTTGTTCACCTTT	NA	False	NA	NA	False	NA	NA	NA	118555674	118606718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
tx.3620	chr14	-	2457	6	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	33244	0	1643	0	3prime_fragment	TRUE	canonical	3	145	junction_4	6.05309838016862	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	NA	False	NA	NA	NA	24194613	24184020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369
tx.3621	chr14	-	4676	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	6	5	6	4	multi-exon	FALSE	canonical	3	105	junction_23	15.9947560851118	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGATATTAAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	24537114	24498768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
tx.3622	chr14	+	553	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5247.91465131627	3271	4	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	24540758	24545927	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543567_24545834
tx.3623	chr14	+	537	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	-24	1100	13	1	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	2437	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	24540761	24545927	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
tx.3624	chr14	+	1562	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	-13	0	3	0	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCTCTGGTTTTGGA	379	False	NA	NA	False	NA	NA	NA	25694580	25700892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
tx.3625	chr14	+	2370	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	20	4	-7	-4	multi-exon	FALSE	canonical	3	387	junction_6	25.4603533329122	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCTGGTGCCAGCAT	-5	True	NA	NA	False	NA	NA	NA	25842599	25887224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
tx.3626	chr14	+	2473	16	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_1	139.082165962746	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	335	False	NA	NA	False	NA	NA	NA	25842578	25887228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_25842720_25843130_25843209_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
tx.3627	chr14	+	1509	3	ISM	ENSMUSG00000021866.16	ENSMUST00000124704.8	2643	9	0	7713	0	-7713	5prime_fragment	FALSE	canonical	3	443	junction_2	1.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAGAAGCAGA	2	True	NA	NA	False	NA	NA	NA	25842606	25871825	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_25842720_25869287_25869351_25870492
tx.3628	chr14	-	546	4	FSM	ENSMUSG00000095304.10	ENSMUST00000183431.8	536	4	-9	-1	-7	1	multi-exon	FALSE	canonical	3	49	junction_3	71.4624998785299	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	NA	False	NA	NA	NA	25902907	25888826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25902704
tx.3629	chr14	-	411	4	NNC	ENSMUSG00000095304.10	novel	439	4	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	82.174610839764	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	NA	False	NA	NA	NA	25902911	25888826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_25888951_25889319_25889444_25891184_25891280_25902843
tx.363	chr1	+	481	3	FSM	ENSMUSG00000026380.11	ENSMUST00000190652.2	478	3	1	-4	0	4	multi-exon	FALSE	canonical	3	62	junction_2	993	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTAATTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	118555675	118565500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_118555833_118559971_118560124_118565328
tx.3630	chr14	-	907	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	134	514	134	384	multi-exon	TRUE	canonical	3	143	junction_3	28.7170100579198	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCATTTCCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	25903390	25888443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
tx.3631	chr14	-	1398	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	49	700	20	170	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTCCACATGCATCTGA	NA	False	NA	NA	False	NA	NA	NA	25928047	25924423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
tx.3632	chr14	-	545	4	NNC	ENSMUSG00000114753.2	novel	5711	2	NA	NA	5038	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.55902608401044	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTGGCTTCATTCT	1639	False	NA	NA	False	NA	NA	NA	26041071	26036336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_26036463_26036786_26036931_26040411_26040567_26040951
tx.3633	chr14	-	2528	6	ISM	ENSMUSG00000021870.18	ENSMUST00000142679.8	1565	11	32744	-1560	2673	-2	3prime_fragment	FALSE	canonical	3	189	junction_2	16.8522995463527	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTGAGTTGTACATCA	NA	False	NA	NA	False	NA	NA	NA	26148583	26134324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389
tx.3634	chr14	+	1710	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	40	415	40	29	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	500	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTCTTTTGAG	1726	False	NA	NA	False	NA	NA	NA	26359268	26377998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
tx.3635	chr14	-	2440	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	224	5061	224	-5061	multi-exon	FALSE	canonical	3	278	junction_2	18	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATAGCTTCTTCGTTT	NA	False	NA	NA	False	NA	NA	NA	26390814	26386173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_26387123_26387532_26387612_26389402
tx.3636	chr14	-	3032	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-35	-3846	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	68.3302824522188	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGAATTTCAGACTGA	NA	False	NA	NA	False	NA	NA	NA	26692497	26644790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
tx.3637	chr14	-	2400	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	697	4545	-30	-4545	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAAGACCTGCTTACTT	NA	False	NA	NA	False	NA	NA	NA	26692492	26645489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
tx.3638	chr14	-	1636	16	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	682	21196	-45	10942	5prime_fragment	FALSE	canonical	3	283	junction_1	27.6115917686757	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATTTGTTCTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	26692507	26662140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
tx.3639	chr14	+	870	4	FSM	ENSMUSG00000040726.11	ENSMUST00000035433.10	1141	4	271	0	271	0	multi-exon	FALSE	canonical	3	134	junction_1	19.2584757675391	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGTATTTTAATATACTTT	NA	False	NA	NA	False	NA	NA	NA	26722589	26724286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_26722834_26723328_26723529_26723775_26723878_26723962
tx.364	chr1	-	479	2	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	3	-184438	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCTGTGTGTGATGGA	1232	False	NA	NA	False	NA	NA	NA	118981346	118980209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_118980374_118981031
tx.3640	chr14	+	1021	2	NNC	ENSMUSG00000040717.7	novel	2186	4	NA	NA	50	-34273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTTGGTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	26760947	26776933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_26761187_26776151
tx.3641	chr14	+	1062	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	8	3	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGTCTGTTTATTT	2348	False	NA	NA	False	NA	NA	NA	27344406	27375762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_27344572_27374643_27375441_27375662
tx.3642	chr14	+	1952	2	ISM	ENSMUSG00000040640.12	ENSMUST00000210327.2	1099	4	29432	-1402	204	1402	3prime_fragment	FALSE	canonical	3	57	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACATTCTTGTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	27374987	27377161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_27375441_27375662
tx.3643	chr14	+	915	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	110	653	-10	169	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	621	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGTAGTACATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	29690374	29696966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
tx.3644	chr14	+	2070	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	49	0	-19	0	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACTGATTTGAGATAAT	NA	False	NA	NA	False	NA	NA	NA	29700342	29715176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
tx.3645	chr14	+	2079	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	48	1096	-2	0	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	1081	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30271135	30295581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
tx.3646	chr14	+	480	3	ISM	ENSMUSG00000021957.8	ENSMUST00000225039.2	1401	8	3178	0	1472	0	3prime_fragment	FALSE	canonical	3	2212	junction_1	58	545	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30293133	30295581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_30293203_30294164_30294288_30295293
tx.3647	chr14	-	1702	10	ISM	ENSMUSG00000021948.18	ENSMUST00000112207.8	2139	15	3664	-238	1513	0	3prime_fragment	TRUE	canonical	3	102	junction_9	12.2151494687216	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	4087	False	NA	NA	False	NA	NA	NA	30326115	30317310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063
tx.3648	chr14	-	2777	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_17	15.936508975905	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5421	False	NA	NA	False	NA	NA	NA	30348167	30317310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
tx.3649	chr14	-	1083	4	FSM	ENSMUSG00000021948.18	ENSMUST00000140701.2	1289	4	491	-285	491	-10	multi-exon	FALSE	canonical	3	115	junction_2	11.0855260988773	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGGTACCAACCTGGC	8529	False	NA	NA	False	NA	NA	NA	30321673	30317324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566
tx.365	chr1	-	625	2	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGCTCAGTAGGGTAC	NA	False	NA	NA	False	NA	NA	NA	119371906	119367864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_119368350_119371766
tx.3650	chr14	+	2368	13	FSM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	19	0	4	0	multi-exon	FALSE	canonical	3	31	junction_11	8.01171017948103	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376335	30413274	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
tx.3651	chr14	-	705	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228736.2	702	4	-2	-1	-2	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	846	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	30723322	30721782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
tx.3652	chr14	+	1506	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	-7	-1	-7	0	multi-exon	TRUE	canonical	3	45	junction_1	28.2055944017416	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3519	False	NA	NA	False	NA	NA	NA	30723349	30733948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
tx.3653	chr14	+	1433	10	NNC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	43.7670601657863	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTGTACCTTGTGG	3526	False	NA	NA	False	NA	NA	NA	30723356	30733964	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731728_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
tx.3654	chr14	+	1617	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	401	0	175	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2321823686655	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3977	False	NA	NA	False	NA	NA	NA	30723807	30733948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
tx.3655	chr14	-	1856	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	91	0	-17	0	multi-exon	TRUE	canonical	3	775	junction_10	82.9678140200482	450	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	30741018	30734389	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
tx.3656	chr14	-	403	2	FSM	ENSMUSG00000058351.12	ENSMUST00000049732.11	311	2	-92	0	-17	0	multi-exon	FALSE	canonical	3	152	junction_1	0	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTTCAGCCATTTT	NA	False	NA	NA	False	NA	NA	NA	30850887	30846461	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_30846567_30850589
tx.3657	chr14	-	502	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	-50	-26	3	26	multi-exon	FALSE	canonical	3	53	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGTTTCTTAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	30850910	30846609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_30846791_30850589
tx.3658	chr14	+	757	6	ISM	ENSMUSG00000071547.5	ENSMUST00000090212.5	1407	13	1479	-3	1479	0	3prime_fragment	FALSE	canonical	3	601	junction_3	26.0967430918113	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	30858288	30861081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
tx.3659	chr14	+	395	2	ISM	ENSMUSG00000071547.5	ENSMUST00000227690.2	737	4	600	-1	600	0	3prime_fragment	FALSE	canonical	3	622	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	30860579	30861081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_30860631_30860737
tx.366	chr1	-	2141	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	145	3	145	-3	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCGCCCTTTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	119432379	119398037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
tx.3660	chr14	-	1268	8	ISM	ENSMUSG00000021910.16	ENSMUST00000164989.8	2276	11	14	2593	14	21	5prime_fragment	FALSE	canonical	3	935	junction_3	91.9329835771023	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATTGCAAAGTGAGAAT	9436	False	NA	NA	False	NA	NA	NA	30928643	30910275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
tx.3661	chr14	-	604	4	NNC	ENSMUSG00000021910.16	novel	1763	3	NA	NA	6	5527	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	532.482863574031	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCTCTGTGTTTTCTG	9428	False	NA	NA	False	NA	NA	NA	30928651	30917373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_30917583_30925183_30925367_30926398_30926483_30928523
tx.3662	chr14	-	2095	11	FSM	ENSMUSG00000021902.8	ENSMUST00000022459.5	2084	11	-11	0	-11	0	multi-exon	FALSE	canonical	3	5	junction_2	8.85945822271317	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGTCTCCTTGTGAATT	NA	False	NA	NA	False	NA	NA	NA	30973285	30959651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_30960111_30960293_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
tx.3663	chr14	-	1981	10	FSM	ENSMUSG00000021902.8	ENSMUST00000226565.2	1971	10	-16	6	-14	0	multi-exon	FALSE	canonical	3	15	junction_2	5.27280467453541	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGTCTCCTTGTGAATT	NA	False	NA	NA	False	NA	NA	NA	30973288	30959651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_30960111_30960293_30960440_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
tx.3664	chr14	+	3413	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	33	14	-20	0	multi-exon	TRUE	canonical	3	305	junction_12	31.9899886683318	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGGTTGCTATCTCGA	NA	False	NA	NA	False	NA	NA	NA	30973439	30981887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
tx.3667	chr14	-	1964	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	10	1972	0	793	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	31216987	31200748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
tx.3668	chr14	-	1986	6	NNC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	-15	787	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	109.924337614561	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAACCGGGTGAATGTGT	NA	False	NA	NA	False	NA	NA	NA	31217012	31200754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215925_31216858
tx.3669	chr14	+	4037	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	705	176	-92	-176	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAATGTCTTGTTTTAT	6307	False	NA	NA	False	NA	NA	NA	31217060	31231639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
tx.367	chr1	-	3401	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-40	3081	24	13	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATGTTAAAGTAGTACC	NA	False	NA	NA	False	NA	NA	NA	119576706	119475847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
tx.3670	chr14	-	2288	17	FSM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	-298	654	-5	116	multi-exon	FALSE	canonical	3	36	junction_9	6.10199762372946	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTGTTTT	6647	False	NA	NA	False	NA	NA	NA	31363219	31329809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
tx.3671	chr14	-	1911	17	NIC	ENSMUSG00000021884.19	novel	2644	17	NA	NA	-5	116	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	13.265910259006	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTGTTTT	6647	False	NA	NA	False	NA	NA	NA	31363219	31329809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31363122
tx.3672	chr14	+	1922	4	FSM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	11	391	11	-391	multi-exon	FALSE	canonical	1	3	junction_2	7.40870359029762	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGCAGAATACTGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	31363024	31390145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_31363093_31384026_31384283_31387838_31387989_31388697
tx.3673	chr14	+	1676	3	FSM	ENSMUSG00000021900.11	ENSMUST00000128014.2	689	3	36	-1023	7	-385	multi-exon	FALSE	canonical	2	5	junction_1	7.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATACTGGCTGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	31363020	31390151	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_31363093_31387838_31387989_31388697
tx.3674	chr14	-	655	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	-5	2303	-5	0	multi-exon	FALSE	canonical	3	570	junction_1	6	341	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTGTCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	31807571	31804828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_31805204_31806863_31806939_31807366
tx.3675	chr14	+	2027	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	349	0	-23	0	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGTTTAATGTTTCAG	NA	False	NA	NA	False	NA	NA	NA	31807718	31825159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
tx.3676	chr14	-	442	2	NNC	ENSMUSG00000115760.2	novel	965	2	NA	NA	718	112	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTGTGTGAAAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	31877310	31876592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_31876977_31877252
tx.3677	chr14	+	3401	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	62	602	-11	6	multi-exon	TRUE	canonical	3	533	junction_6	51.0289194210886	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTGTTATCTGT	NA	False	NA	NA	False	NA	NA	NA	31881883	31901210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
tx.3678	chr14	-	1164	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	9	0	9	0	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	1124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	False	NA	NA	False	NA	NA	NA	31923846	31902118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
tx.3679	chr14	+	3805	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	134	junction_15	101.735663996062	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	NA	False	NA	NA	NA	31923903	32019177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
tx.368	chr1	-	1498	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	35	1808	35	-1808	multi-exon	FALSE	canonical	3	113	junction_1	0	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGGACTGTGGAAGT	NA	False	NA	NA	False	NA	NA	NA	119840903	119837427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_119838885_119840862
tx.3680	chr14	+	3054	16	ISM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	7208	330	-5242	0	3prime_fragment	FALSE	canonical	1	134	junction_13	83.8871199224821	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	1485	False	NA	NA	False	NA	NA	NA	31931113	32019177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
tx.3681	chr14	+	1578	6	ISM	ENSMUSG00000021911.17	ENSMUST00000170129.8	2786	15	60676	0	-12999	0	3prime_fragment	FALSE	canonical	1	134	junction_3	120.054321038437	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	NA	False	NA	NA	NA	31984664	32019177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
tx.3682	chr14	+	1200	3	ISM	ENSMUSG00000021911.17	ENSMUST00000171871.2	587	5	8459	-877	8459	1	3prime_fragment	FALSE	canonical	3	433	junction_1	5.5	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGCCACTTATATTTT	NA	False	NA	NA	False	NA	NA	NA	32006122	32019178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_32006162_32017155_32017285_32018146
tx.3683	chr14	-	589	3	Fusion	ENSMUSG00000090459.2_ENSMUSG00000115691.2	novel	391	2	NA	NA	-10422	0	multi-exon	FALSE	canonical	3	32	junction_1	10	16	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTCATTGACAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	32027353	32014880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr14_-_32015223_32016885_32016987_32027207
tx.3684	chr14	-	2859	12	NIC	ENSMUSG00000021936.15	novel	2587	12	NA	NA	2	257	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.14655787270487	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAAATGATGTCTATA	NA	False	NA	NA	False	NA	NA	NA	33169112	33102748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_33104282_33105830_33105909_33108518_33108583_33109128_33109254_33110756_33110940_33112198_33112271_33114898_33115065_33124580_33124720_33124821_33124881_33130004_33130135_33132812_33132982_33168971
tx.3685	chr14	+	1879	12	FSM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	1	0	1	0	multi-exon	FALSE	canonical	2	6	junction_2	1.55345522642137	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGGATTTGTGGGG	NA	False	NA	NA	False	NA	NA	NA	33807938	33822528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
tx.3686	chr14	-	459	3	FSM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	-55	4	-55	-4	multi-exon	FALSE	canonical	3	2248	junction_2	168.5	1224	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCCTGAGTTTACCTC	NA	False	NA	NA	False	NA	NA	NA	34077445	34073841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_34074035_34075654_34075718_34077242
tx.3687	chr14	+	838	2	Antisense	novelGene_ENSMUSG00000023064.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCAGTGTCCCAGGCTG	1260	False	NA	NA	False	NA	NA	NA	34087277	34096925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr14_+_34087676_34096485
tx.3688	chr14	+	942	3	Antisense	novelGene_ENSMUSG00000023064.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	2	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGATGCCTCAGTGTCC	1279	False	NA	NA	False	NA	NA	NA	34087296	34096918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr14_+_34087676_34088315_34088446_34096485
tx.3689	chr14	-	793	5	FSM	ENSMUSG00000023064.5	ENSMUST00000023826.5	852	5	59	0	59	0	multi-exon	FALSE	canonical	3	10	junction_4	6.72681202353685	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCTTCTTCTTTGTGC	6013	False	NA	NA	False	NA	NA	NA	34096687	34092230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_34092523_34092813_34092874_34095212_34095341_34095627_34095670_34096416
tx.369	chr1	-	887	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	294	130	294	-130	multi-exon	FALSE	canonical	3	40	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCCTACGGTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	120001510	119995236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_119996055_120001441
tx.3690	chr14	+	2116	2	ISM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	22891	527	22635	-527	3prime_fragment	FALSE	canonical	3	70	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	34120312	34125717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_34121581_34124869
tx.3691	chr14	+	860	4	ISM	ENSMUSG00000041408.19	ENSMUST00000151285.8	1820	11	13369	0	2088	0	3prime_fragment	FALSE	canonical	3	1010	junction_3	44.6791027463872	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	NA	False	NA	NA	False	NA	NA	NA	34461315	34468176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_34461396_34463013_34463103_34466765_34466862_34467581
tx.3692	chr14	+	1348	3	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	17	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGCAGTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34496488	34500224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr14_+_34496610_34498763_34498915_34499148
tx.3693	chr14	+	1292	3	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	29.5	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCAGTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34496505	34500225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr14_+_34496610_34498763_34498875_34499148
tx.3694	chr14	-	2472	8	ISM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	2	23261	2	2593	5prime_fragment	FALSE	canonical	3	53	junction_4	8.04325043443386	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAAAAATCCAACTATT	NA	False	NA	NA	False	NA	NA	NA	36690732	36620153	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
tx.3695	chr14	-	2504	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-43	727	-23	5	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	3095	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGCTGTACTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	36857252	36842775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
tx.3696	chr14	-	546	2	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTATTAATTTATTG	NA	False	NA	NA	False	NA	NA	NA	37814373	37813328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr14_-_37813757_37814255
tx.3697	chr14	-	2543	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-76	8	-76	-6	multi-exon	TRUE	canonical	3	610	junction_1	26.6868413267663	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAGCATTTTGGTGATA	NA	False	NA	NA	False	NA	NA	NA	40688840	40628409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
tx.3698	chr14	-	2389	8	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-86	-72	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	223.728607459838	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTGTTTGGGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	40688850	40628475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40688732
tx.3699	chr14	-	1012	2	ISM	ENSMUSG00000021792.16	ENSMUST00000153830.8	1003	5	6712	-791	5283	5	3prime_fragment	FALSE	canonical	3	270	junction_1	0	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGTGCACAAGTTT	NA	False	NA	NA	False	NA	NA	NA	40719778	40715691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_40716595_40719669
tx.37	chr1	-	1632	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	198	351	-7	-351	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGACATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	16689515	16640356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
tx.370	chr1	-	549	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	10	10	10	0	multi-exon	FALSE	canonical	3	2709	junction_1	24.2532930181083	1094	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGTTACTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	120048798	120041019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
tx.3700	chr14	-	1571	6	FSM	ENSMUSG00000021792.16	ENSMUST00000022317.15	1537	6	-29	-5	-16	5	multi-exon	FALSE	canonical	3	150	junction_5	72.4911029023562	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGTGCACAAGTTT	NA	False	NA	NA	False	NA	NA	NA	40735761	40715691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
tx.3701	chr14	-	1588	6	FSM	ENSMUSG00000021792.16	ENSMUST00000118466.8	1567	6	-16	-5	-16	5	multi-exon	FALSE	canonical	3	166	junction_5	66.6111101844129	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGTGCACAAGTTT	NA	False	NA	NA	False	NA	NA	NA	40735761	40715691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735654
tx.3702	chr14	+	1992	5	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14082	-336	at_least_one_novel_splicesite	TRUE	canonical	3	3	junction_3	8.44097150806707	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACC	NA	False	NA	NA	False	NA	NA	NA	40986679	41010436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_40987404_41001646_41001810_41002809_41002942_41003619_41003802_41009645
tx.3703	chr14	+	1037	3	Antisense	novelGene_ENSMUSG00000091847.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	5	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGATCCATTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	41085317	41102275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr14_+_41085450_41089611_41090056_41101814
tx.3704	chr14	+	1115	2	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGCAAGAATGTGTT	8682	False	NA	NA	False	NA	NA	NA	41146560	41148274	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr14_+_41146812_41147410
tx.3705	chr14	+	1609	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	0	intron_retention	TRUE	canonical	3	21	junction_4	63.2262252198845	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	41761472	41825778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_41761595_41761988_41762060_41766111_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
tx.3706	chr14	+	1886	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	7	intron_retention	FALSE	canonical	3	21	junction_4	63.0672040146241	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAAGAAACTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	41761472	41825785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
tx.3707	chr14	+	1456	4	NNC	ENSMUSG00000090634.2	novel	1764	5	NA	NA	-49446	-336	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	5.43650214343336	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	43066659	43123920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_43067007_43118142_43118275_43118957_43119140_43123125
tx.3708	chr14	+	1445	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228505.2	1591	4	-192	338	-10	-331	multi-exon	FALSE	canonical	3	45	junction_2	11.5854314646552	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTAAGAAACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	43132482	43163130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_43132821_43157302_43157435_43158114_43158297_43162337
tx.3709	chr14	+	1609	5	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45964	-27	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	10.8714074525794	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	43735068	43788643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_43735407_43781959_43782123_43783111_43783244_43783926_43784109_43787849
tx.371	chr1	+	509	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	-21	0	-13	0	multi-exon	FALSE	canonical	3	34	junction_1	7.2773621594641	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTGATTTATCTCTA	NA	False	NA	NA	False	NA	NA	NA	120048903	120115919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
tx.3710	chr14	-	4274	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	33	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.639737711466	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCACATGACAGCTGT	NA	False	NA	NA	False	NA	NA	NA	45555996	45520654	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
tx.3711	chr14	+	1563	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	40	631	0	-631	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	1367	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	45567284	45586531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
tx.3712	chr14	-	1789	6	NIC	ENSMUSG00000037722.9	novel	710	7	NA	NA	0	703	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	483.994628069362	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	45626250	45614907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45625918
tx.3713	chr14	-	1555	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	116	1117	-52	703	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	554	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	45626302	45614907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
tx.3714	chr14	-	1517	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-30	703	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	472.912930675405	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	45626448	45614907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626388
tx.3715	chr14	-	3238	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	55	0	55	0	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	False	NA	NA	False	NA	NA	NA	45767520	45696251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
tx.3716	chr14	+	504	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	-2	-15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCAAGAAGGTGGACTC	NA	False	NA	NA	False	NA	NA	NA	46321482	46322442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_46321631_46322086
tx.3717	chr14	-	2002	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	68	-6	-51	6	multi-exon	FALSE	canonical	3	24	junction_3	6.0184900284226	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTATCTTATTTCCTC	6433	False	NA	NA	False	NA	NA	NA	46628058	46620970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
tx.3718	chr14	+	737	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	-5	6	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCCAGCATAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	46998037	47008983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
tx.3719	chr14	-	1347	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	88	103	11	-103	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	678	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTGCTGTGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47025780	47013126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
tx.372	chr1	+	523	6	NNC	ENSMUSG00000026388.16	novel	488	6	NA	NA	-10	3211	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	18.5515498004884	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAAGCTCACTTGCTG	NA	False	NA	NA	False	NA	NA	NA	120048906	120104507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120104341
tx.3720	chr14	-	636	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	20	3515	20	10	multi-exon	FALSE	canonical	0	0	junction_3	212.21091447478	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTTACAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	47059679	47049120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
tx.3721	chr14	+	1209	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	115	0	-4	0	multi-exon	FALSE	canonical	3	30	junction_4	10.2097992144802	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACACTGTCTTTGTC	652	False	NA	NA	False	NA	NA	NA	47069696	47091650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
tx.3722	chr14	-	2020	11	ISM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	20692	0	121	0	3prime_fragment	FALSE	canonical	3	301	junction_9	38.057982079979	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	47493597	47478400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560
tx.3723	chr14	+	2326	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	-11	4562	-11	1504	multi-exon	FALSE	canonical	3	35	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCGTGGAGGCGAATG	NA	False	NA	NA	False	NA	NA	NA	47514376	47528997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_47514679_47526973
tx.3724	chr14	+	1459	3	ISM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	-11	11392	-8	889	5prime_fragment	FALSE	canonical	3	218	junction_2	1	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGACTTGCTGTTTGC	9619	False	NA	NA	False	NA	NA	NA	47535714	47549160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_47535863_47546023_47546046_47547871
tx.3725	chr14	+	1061	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	3	3478	3	-3478	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTGTGCTTAATGTGA	9633	False	NA	NA	False	NA	NA	NA	47535728	47557074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
tx.3726	chr14	-	510	4	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	4.71404520791032	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTGTGGTGGTCCATA	NA	False	NA	NA	False	NA	NA	NA	47602566	47594604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr14_-_47594780_47600014_47600062_47601149_47601315_47602443
tx.3727	chr14	+	985	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	22	291	-5	3	multi-exon	TRUE	canonical	3	42	junction_1	20.2286924935845	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	NA	False	NA	NA	NA	47611367	47623254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
tx.3728	chr14	+	955	6	FSM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	101	363	-2	3	multi-exon	FALSE	canonical	3	33	junction_1	23.7941169199447	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	NA	False	NA	NA	NA	47611370	47623254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_47611410_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
tx.3729	chr14	-	2765	19	FSM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	197	2	-3	-2	multi-exon	FALSE	canonical	3	355	junction_12	54.7968470301389	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655667	47625237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
tx.373	chr1	-	2771	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	-10	-9	-10	9	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAAATTGTCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	120193024	120154143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
tx.3730	chr14	+	3088	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	-92	-3	-34	-1	multi-exon	FALSE	canonical	3	71	junction_1	10.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTGGTCTTAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	47709983	47769418	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_47710175_47763661_47763772_47766631
tx.3731	chr14	+	2903	2	FSM	ENSMUSG00000037536.15	ENSMUST00000043112.9	2937	2	42	-8	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	NA	False	NA	NA	NA	47710059	47769419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_47710175_47766631
tx.3732	chr14	-	3347	10	FSM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	14	89	14	-89	multi-exon	FALSE	canonical	3	110	junction_3	17.6572301841987	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGCGACTGAAACTTC	NA	False	NA	NA	False	NA	NA	NA	47805877	47778439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
tx.3733	chr14	+	4342	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	405	junction_36	132.185085310088	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	NA	False	NA	NA	NA	47886773	47974021	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
tx.3734	chr14	-	1920	2	ISM	ENSMUSG00000021848.17	ENSMUST00000135279.2	737	3	364	-1239	364	0	3prime_fragment	FALSE	canonical	3	44	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGTCTAGTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	48899025	48895133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_48896784_48898755
tx.3735	chr14	-	2107	3	FSM	ENSMUSG00000021848.17	ENSMUST00000122009.8	1737	3	124	-494	124	0	multi-exon	FALSE	canonical	3	33	junction_2	5.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGTCTAGTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	48900205	48895133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_48896784_48898755_48898908_48899900
tx.3736	chr14	-	2164	4	FSM	ENSMUSG00000021848.17	ENSMUST00000118578.9	2144	4	-18	-2	-18	0	multi-exon	FALSE	canonical	2	4	junction_3	16.8720676464584	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGTCTAGTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	48902581	48895133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_48896784_48898755_48898908_48899900_48900117_48902435
tx.3737	chr14	-	1918	4	NNC	ENSMUSG00000021848.17	novel	2144	4	NA	NA	-100	24	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	13.7194104181711	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATTGGTCAATTGCTC	NA	False	NA	NA	False	NA	NA	NA	48900429	48895283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_48896784_48898755_48898908_48899900_48900117_48900379
tx.3738	chr14	-	4069	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	299	8331	42	1334	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	49303811	49249877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
tx.3739	chr14	+	3097	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	22	3202	-14	258	multi-exon	TRUE	canonical	3	109	junction_2	12.7487494384703	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTCTGCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	49303973	49325134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
tx.374	chr1	-	2450	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	247	0	-12	0	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	121255506	121232081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
tx.3740	chr14	+	2023	2	FSM	ENSMUSG00000036291.7	ENSMUST00000228238.2	3514	2	40	1451	5	-1451	multi-exon	FALSE	canonical	3	152	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACAGGGAAATTGACTT	NA	False	NA	NA	False	NA	NA	NA	49303992	49312699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_49304322_49311005
tx.3741	chr14	-	1839	10	FSM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	3	0	3	0	multi-exon	FALSE	canonical	3	788	junction_6	38.5313724991294	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATAGTTCTGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	51022973	51002871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
tx.3742	chr14	-	3149	3	FSM	ENSMUSG00000006288.9	ENSMUST00000227934.2	2058	3	-23	-1068	3	418	multi-exon	FALSE	canonical	3	834	junction_2	1.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACCCCAAAACC	NA	False	NA	NA	False	NA	NA	NA	51022973	51012488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_51015426_51018931_51019065_51022894
tx.3743	chr14	-	1564	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	80.7971998277168	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	8890	False	NA	NA	False	NA	NA	NA	51033171	51026705	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_51027470_51027592_51027663_51029429_51029764_51031014_51031332_51033092
tx.3744	chr14	-	1489	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	18	2	18	-2	multi-exon	FALSE	canonical	3	174	junction_1	17.4419672692682	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	8894	False	NA	NA	False	NA	NA	NA	51033167	51026706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
tx.3745	chr14	-	1248	2	NNC	ENSMUSG00000071470.5	novel	444	3	NA	NA	5090	-4309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTATGAGTTGTTCTT	1962	False	NA	NA	False	NA	NA	NA	51040099	51035570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_51036656_51039936
tx.3746	chr14	+	1811	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	83	0	-1	0	multi-exon	FALSE	canonical	3	692	junction_5	52.2695577431708	295	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	51045380	51058758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
tx.3747	chr14	-	1268	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	32	2088	11	0	multi-exon	TRUE	canonical	3	62	junction_9	170.895289578151	379	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTTGTGTTTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	51162318	51153138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
tx.3748	chr14	+	1249	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	716	junction_1	194.901898400195	961	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	169	False	NA	NA	False	NA	NA	NA	51162414	51164596	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
tx.3749	chr14	-	1591	6	ISM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	317	-5	261	5	3prime_fragment	FALSE	canonical	3	781	junction_5	33.7579620237952	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTTAACAACTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	51167996	51164666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590
tx.375	chr1	-	2396	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	70.4346505634833	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTTAGTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	121255522	121232084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247635_121255419
tx.3750	chr14	-	983	2	ISM	ENSMUSG00000035953.15	ENSMUST00000161669.2	356	4	229	-651	229	0	3prime_fragment	FALSE	canonical	3	864	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	NA	False	NA	NA	NA	51166437	51164671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_51165495_51166277
tx.3751	chr14	-	1587	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	21	1147	5	0	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	NA	False	NA	NA	NA	51168285	51164671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
tx.3752	chr14	+	1338	6	FSM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	204	1400	0	1118	multi-exon	FALSE	canonical	3	117	junction_1	38.2015706483385	184	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTGTGTGGTTCGGTA	9234	False	NA	NA	False	NA	NA	NA	51181962	51189469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
tx.3753	chr14	+	1232	6	FSM	ENSMUSG00000068417.9	ENSMUST00000095925.5	1372	6	144	-4	-108	4	multi-exon	FALSE	canonical	2	7	junction_3	36.6911433454996	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	51193592	51202210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_51193686_51196971_51197142_51200561_51200666_51200846_51201023_51201135_51201327_51201712
tx.3754	chr14	+	1569	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	54	0	7	0	multi-exon	FALSE	canonical	0	0	junction_8	48.1261901412816	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTGATTGC	NA	False	NA	NA	False	NA	NA	NA	52122352	52129325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
tx.3755	chr14	+	745	6	ISM	ENSMUSG00000004561.15	ENSMUST00000168413.8	1844	13	4655	-8	2352	0	3prime_fragment	FALSE	canonical	3	141	junction_3	17.2209175133034	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTGATTGC	NA	False	NA	NA	False	NA	NA	NA	52126987	52129325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
tx.3756	chr14	+	1370	4	FSM	ENSMUSG00000072572.10	ENSMUST00000047726.12	2334	4	27	937	27	2	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGCAATTCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	52131093	52133265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_52131372_52131545_52131677_52131912_52131964_52132355
tx.3757	chr14	-	1995	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	110	-2	2	2	multi-exon	TRUE	canonical	3	127	junction_6	11.1385064766607	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTGTTAATCCGGGTC	NA	False	NA	NA	False	NA	NA	NA	52150835	52142737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
tx.3758	chr14	+	662	2	FSM	ENSMUSG00000072571.4	ENSMUST00000228408.2	415	2	-55	-192	-26	192	multi-exon	FALSE	canonical	3	33	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAATTTTTAGTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	52254295	52255071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_52254399_52254512
tx.3759	chr14	-	1670	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	436	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATTTGAAGGAAAGA	8736	False	NA	NA	False	NA	NA	NA	52341474	52311913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
tx.376	chr1	-	2055	5	FSM	ENSMUSG00000003721.15	ENSMUST00000186915.2	674	5	-39	-1342	7	0	multi-exon	FALSE	canonical	3	11	junction_4	81.0524521529115	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	121255487	121232081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121255419
tx.3760	chr14	-	1675	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	-4	20	-4	-19	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	484	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCCTTATTAAACCAGG	8742	False	NA	NA	False	NA	NA	NA	52341468	52311928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
tx.3761	chr14	-	1528	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-42	-185	-4	-161	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	380	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTGAATGGGAGTT	8742	False	NA	NA	False	NA	NA	NA	52341468	52312070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
tx.3762	chr14	-	1373	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	-6	1250	-4	4	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	492	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	8742	False	NA	NA	False	NA	NA	NA	52341468	52312251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
tx.3763	chr14	-	1440	2	FSM	ENSMUSG00000035726.9	ENSMUST00000227577.2	548	2	413	-1305	413	0	multi-exon	FALSE	canonical	3	1180	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	NA	False	NA	NA	NA	52400174	52397870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_52399280_52400143
tx.3764	chr14	-	1613	3	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	34102	5	-184	-5	3prime_fragment	FALSE	canonical	3	1070	junction_2	55	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	NA	False	NA	NA	NA	52400771	52397875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_52399280_52400143_52400222_52400640
tx.3765	chr14	-	4492	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	176	5	176	-5	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	NA	False	NA	NA	NA	52434697	52397875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
tx.3766	chr14	-	2709	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	191	6	-15	1	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTCATGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	52516811	52499221	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
tx.3768	chr14	+	3175	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	441	1889	22	-1889	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTTAAATGTGCATTC	NA	False	NA	NA	False	NA	NA	NA	52517043	52531969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
tx.377	chr1	-	2399	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	72.0316597059932	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	121255487	121232081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247357_121247702_121255419
tx.3770	chr14	-	2004	11	FSM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	7	14	3	2	multi-exon	FALSE	canonical	3	126	junction_7	19.5910693939866	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAAGTGAAATTATGG	NA	False	NA	NA	False	NA	NA	NA	52542578	52532311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
tx.3771	chr14	-	649	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	223	6	33	-6	multi-exon	FALSE	canonical	3	1530	junction_1	8	225	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATTCGTTCCTTCATG	NA	False	NA	NA	False	NA	NA	NA	54491338	54472941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_54473171_54480155_54480326_54491088
tx.3772	chr14	+	2382	7	FSM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	20	-1	20	1	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGACACTGTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	54496708	54506622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
tx.3773	chr14	+	1528	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	-7	1017	0	19	multi-exon	TRUE	canonical	3	499	junction_4	29.1475598792348	507	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTGATGTTTGTTAAG	NA	False	NA	NA	False	NA	NA	NA	54598290	54606113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
tx.3774	chr14	-	2197	11	NNC	ENSMUSG00000000958.11	novel	2126	11	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	53.915118473393	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	54655299	54606898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655205
tx.3775	chr14	-	2552	12	NIC	ENSMUSG00000000958.11	novel	2126	11	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	58.1421739935326	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	54655331	54606898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54654944
tx.3776	chr14	-	2335	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-156	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	53.460785212673	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	54655393	54606898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654228_54655357
tx.3777	chr14	+	411	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	0	7	0	0	multi-exon	FALSE	canonical	3	1056	junction_1	196.876230154887	643	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	54664365	54667206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
tx.3778	chr14	-	2531	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	150	10	-14	-10	multi-exon	FALSE	canonical	3	685	junction_14	59.4941895797396	91	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4845	False	NA	NA	False	NA	NA	NA	54754832	54744653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
tx.3779	chr14	-	1567	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	20	0	20	0	multi-exon	FALSE	canonical	3	401	junction_5	37.1423687391577	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	54791798	54779241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
tx.378	chr1	+	2410	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	-3	4867	-3	5	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGAGCAACTGCTAAGA	NA	False	NA	NA	False	NA	NA	NA	121358774	121429322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
tx.3780	chr14	-	3382	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	18	-3	18	3	multi-exon	TRUE	canonical	3	297	junction_5	54.835933399886	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTATTGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	54814997	54804925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
tx.3781	chr14	-	894	3	FSM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	5	0	5	0	multi-exon	FALSE	canonical	3	1854	junction_2	4.5	160	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGTCCACAGTTATT	8629	False	NA	NA	False	NA	NA	NA	54855474	54851575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_54851939_54853971_54854279_54855250
tx.3782	chr14	-	1807	7	ISM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	7881	0	131	0	3prime_fragment	FALSE	canonical	3	362	junction_2	38.6253371074825	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	NA	False	NA	NA	False	NA	NA	NA	54883192	54879617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061
tx.3783	chr14	-	2506	13	FSM	ENSMUSG00000022185.20	ENSMUST00000150371.8	2494	13	-6	-6	-3	0	multi-exon	FALSE	canonical	3	46	junction_12	131.761437412047	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3751	False	NA	NA	False	NA	NA	NA	54891145	54879617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
tx.3784	chr14	+	1309	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	535	-1	-293	1	multi-exon	FALSE	canonical	3	385	junction_1	0	188	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTGGTGATTCACATT	NA	False	NA	NA	False	NA	NA	NA	54924207	54928199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_54924578_54927260
tx.3785	chr14	-	2509	5	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	52339	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.1732288239399	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTGATGGAGTTAATAA	9027	False	NA	NA	False	NA	NA	NA	54967048	54959669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54967003
tx.3786	chr14	+	1247	15	FSM	ENSMUSG00000112858.3	ENSMUST00000218311.2	1201	15	-33	-13	-33	0	multi-exon	TRUE	canonical	3	13	junction_1	4.37525509460387	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTGTATGAGGGTAT	NA	False	NA	NA	False	NA	NA	NA	55051564	55091565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55051743_55053942_55054044_55056993_55057047_55057594_55057670_55075569_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
tx.3787	chr14	+	918	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	126	-14	118	14	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATACTGTGGAAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	55131730	55135640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
tx.3788	chr14	+	685	6	ISM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	242	-49	27	14	3prime_fragment	FALSE	canonical	3	2071	junction_5	209.02210409428	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATACTGTGGAAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	55132316	55135640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
tx.3789	chr14	+	1099	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	95	6	95	-6	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	720	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	55253005	55261588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
tx.379	chr1	+	797	5	FSM	ENSMUSG00000026339.19	ENSMUST00000128924.2	762	5	-33	-2	0	2	multi-exon	FALSE	canonical	2	2	junction_4	38.3861954353385	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGAGGATGTGAGAG	NA	False	NA	NA	False	NA	NA	NA	121358803	121371753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121371460
tx.3790	chr14	+	2535	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	295	0	295	0	multi-exon	FALSE	canonical	3	37	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTCTTTATTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	55332535	55336443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55333464_55334836
tx.3791	chr14	-	2644	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	29	0	-3	0	multi-exon	TRUE	canonical	3	99	junction_4	12.8308372870802	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGCTGTGAAGTGGC	NA	False	NA	NA	False	NA	NA	NA	55344021	55336306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
tx.3792	chr14	+	1270	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	122	0	5	0	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCGTGTTTATTTCTC	NA	False	NA	NA	False	NA	NA	NA	55716336	55727797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
tx.3793	chr14	+	1028	4	ISM	ENSMUSG00000022210.8	ENSMUST00000226168.2	828	5	-110	6	7	0	intron_retention	FALSE	canonical	3	56	junction_3	6.12825877028341	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCCTAGTCTCTGGG	NA	False	NA	NA	False	NA	NA	NA	55716221	55725028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549
tx.3794	chr14	+	2228	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	90	1082	-33	1	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	251	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGTCTGCATAGG	8981	False	NA	NA	False	NA	NA	NA	55777812	55786392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
tx.3795	chr14	+	1234	5	ISM	ENSMUSG00000040618.8	ENSMUST00000226770.2	2417	9	4478	-49	940	-13	3prime_fragment	FALSE	canonical	3	1534	junction_2	95.7062563263238	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTTTGTTTCCACTTCCC	NA	False	NA	NA	False	NA	NA	NA	55782340	55786378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
tx.3796	chr14	+	2543	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_1	39.769296432996	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	55797939	55807521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_55798085_55798666_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
tx.3797	chr14	+	1020	11	FSM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	92	0	-4	0	multi-exon	FALSE	canonical	1	117	junction_4	54.1775783881118	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	False	NA	NA	False	NA	NA	NA	55815908	55818985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
tx.3798	chr14	-	880	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	-22	-3	-22	2	multi-exon	FALSE	canonical	3	89	junction_1	3.69966214673719	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTATTTATTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	55822781	55818975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
tx.3799	chr14	-	840	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	122	0	8	0	multi-exon	FALSE	canonical	3	915	junction_9	61.4455856835949	536	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGTTGTTCATTGA	NA	False	NA	NA	False	NA	NA	NA	55828422	55824897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
tx.38	chr1	-	939	4	NNC	ENSMUSG00000079658.10	novel	960	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_3	1156.21518566206	30	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGTTTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	16727115	16712990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_16713703_16715909_16716054_16718178_16718232_16727085
tx.380	chr1	-	2018	12	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	1858	4	1591	-4	3prime_fragment	FALSE	canonical	3	571	junction_7	87.1971263458562	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTTTATACCTTT	NA	False	NA	NA	False	NA	NA	NA	121493860	121481567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609
tx.3800	chr14	+	3422	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	42	21	6	-1	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGGTGGTCCTTCTT	4216	False	NA	NA	False	NA	NA	NA	55829206	55841129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
tx.3801	chr14	+	821	7	ISM	ENSMUSG00000047098.19	ENSMUST00000133903.3	4939	15	8159	-1	-116	1	3prime_fragment	FALSE	canonical	3	183	junction_1	12.3749298538977	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTGGTGGTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	55838496	55841128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
tx.3802	chr14	+	2257	9	FSM	ENSMUSG00000002325.16	ENSMUST00000130697.8	2459	9	202	0	202	0	multi-exon	FALSE	canonical	3	21	junction_1	14.5086181285469	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	NA	False	NA	NA	False	NA	NA	NA	55841643	55847487	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
tx.3803	chr14	+	2109	20	FSM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	75	0	75	0	multi-exon	FALSE	canonical	3	23	junction_6	6.49738920505725	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTCTTTTTTTTTTT	1403	False	NA	NA	False	NA	NA	NA	55855568	55862852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
tx.3804	chr14	-	3494	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	31	321	-22	1	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAGGAAGCAGCTGTGA	9776	False	NA	NA	False	NA	NA	NA	55873110	55863177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
tx.3805	chr14	-	2508	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	-31	-95	0	0	multi-exon	FALSE	canonical	3	260	junction_2	41.5060236592232	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTTGGAAGTTTTG	5175	False	NA	NA	False	NA	NA	NA	55880828	55873421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
tx.3806	chr14	-	1595	2	FSM	ENSMUSG00000002320.16	ENSMUST00000127473.2	2271	2	-3	679	-3	-331	multi-exon	FALSE	canonical	3	368	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGGATTTCCTCTTG	5172	False	NA	NA	False	NA	NA	NA	55880831	55878231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55879046_55880050
tx.3807	chr14	-	1477	4	ISM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	367	-5	346	5	3prime_fragment	FALSE	canonical	3	428	junction_3	26.4112770527204	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGACAATTTTCTTTAA	2709	False	NA	NA	False	NA	NA	NA	55897541	55895345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444
tx.3808	chr14	-	1736	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	-1	-5	-1	5	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGACAATTTTCTTTAA	2341	False	NA	NA	False	NA	NA	NA	55897909	55895345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
tx.3809	chr14	-	691	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	53	989	-4	890	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGTTTCCATTTTTCT	2338	False	NA	NA	False	NA	NA	NA	55897912	55896324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
tx.381	chr1	-	2211	13	FSM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	43	4	43	-4	multi-exon	FALSE	canonical	3	390	junction_12	122.318232492135	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTTTATACCTTT	NA	False	NA	NA	False	NA	NA	NA	121495675	121481567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
tx.3810	chr14	-	792	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	32	0	32	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	1639	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTCTTTCTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	55909549	55899719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
tx.3811	chr14	+	1510	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	27	456	4	428	multi-exon	TRUE	canonical	3	97	junction_1	15.6828127988557	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAGACGTTCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	55909718	55916201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
tx.3812	chr14	+	678	2	ISM	ENSMUSG00000002326.7	ENSMUST00000227696.2	545	3	917	-428	917	428	3prime_fragment	FALSE	canonical	3	162	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAGACGTTCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	55915330	55916201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_55915488_55915680
tx.3813	chr14	-	1312	8	ISM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	508	1214	-193	1127	3prime_fragment	FALSE	canonical	3	280	junction_6	43.2383050131265	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACAGGCTTCTCTTAGC	NA	False	NA	NA	False	NA	NA	NA	55918769	55916536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681
tx.3814	chr14	-	1708	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	12	1236	-4	1105	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	NA	False	NA	NA	NA	55919265	55916558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
tx.3815	chr14	-	1865	8	FSM	ENSMUSG00000007589.10	ENSMUST00000228264.2	3130	8	-25	1290	-7	1105	multi-exon	FALSE	canonical	3	280	junction_5	42.7532073030068	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	NA	False	NA	NA	NA	55919268	55916558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
tx.3816	chr14	-	2732	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	-1	-1	-1	1	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTTAGTAGTCCTG	395	False	NA	NA	False	NA	NA	NA	55950952	55937489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
tx.3817	chr14	-	1656	9	ISM	ENSMUSG00000022218.17	ENSMUST00000002389.9	2791	15	3501	14	3501	1	3prime_fragment	FALSE	canonical	3	193	junction_5	15.0312175155574	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTTAGTAGTCCTG	4303	False	NA	NA	False	NA	NA	NA	55947044	55937489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850
tx.3818	chr14	-	2040	11	ISM	ENSMUSG00000022218.17	ENSMUST00000002389.9	2791	15	2318	22	2318	-7	3prime_fragment	FALSE	canonical	3	145	junction_10	27.7057755711693	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGATGCTGTTTAG	3120	False	NA	NA	False	NA	NA	NA	55948227	55937497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924
tx.3819	chr14	-	1208	11	ISM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	2334	-20	204	0	3prime_fragment	FALSE	canonical	3	454	junction_10	29.2567940827426	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGCCCTGACAACACTT	NA	False	NA	NA	False	NA	NA	NA	55957386	55953761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252
tx.382	chr1	-	2672	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	-110	3	50	-3	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	506	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	125363394	125320645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
tx.3820	chr14	-	1898	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	6	-18	0	-2	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCTGCCCTGACAACAC	NA	False	NA	NA	False	NA	NA	NA	55959714	55953763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
tx.3821	chr14	-	1986	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	4	892	4	-3	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTGCCCTGACAACA	NA	False	NA	NA	False	NA	NA	NA	55959655	55953764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
tx.3822	chr14	-	1420	9	FSM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	57	0	-34	0	multi-exon	FALSE	canonical	3	126	junction_7	15.4833580014156	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTTCTCATTCTGT	NA	False	NA	NA	False	NA	NA	NA	55983090	55976476	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
tx.3823	chr14	+	1662	9	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	736	1436	736	-1436	3prime_fragment	FALSE	canonical	3	659	junction_1	23.4464149711635	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	55983885	55991521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
tx.3824	chr14	+	532	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	7565	1436	4032	-1436	3prime_fragment	FALSE	canonical	3	698	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	55990714	55991521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_55990823_55991097
tx.3825	chr14	+	1141	4	FSM	ENSMUSG00000023411.13	ENSMUST00000226869.2	2217	4	1396	-320	1396	1	multi-exon	FALSE	canonical	3	26	junction_3	8.05536398239638	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGCTCCAGAGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	56069121	56071401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_56069166_56069404_56069532_56069679_56070262_56071013
tx.3826	chr14	-	1189	5	FSM	ENSMUSG00000022223.10	ENSMUST00000227139.2	867	5	305	-627	-10	0	multi-exon	FALSE	canonical	3	161	junction_3	15.0499169432924	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	56137380	56134739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270
tx.3827	chr14	-	1225	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	30	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	35.4547599061113	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	56137685	56134739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
tx.3828	chr14	+	3536	26	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	3	349	junction_12	57.9852946875326	53	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56640124	56726893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
tx.3829	chr14	+	1298	10	ISM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-32	2965	-29	-2965	5prime_fragment	TRUE	canonical	3	453	junction_4	32.6602412425979	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTCATGTGCTTAGTAG	NA	False	NA	NA	False	NA	NA	NA	56640124	56676405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060
tx.383	chr1	-	2562	13	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_12	696.362747703299	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	125363452	125320645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363362
tx.3830	chr14	+	4012	3	ISM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-22	17069	-19	-17069	intron_retention	FALSE	canonical	3	532	junction_2	11	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	56640134	56662301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_56640282_56643033_56643129_56658531
tx.3831	chr14	+	2975	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_3	214.971059012644	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1778	False	NA	NA	False	NA	NA	NA	56905704	56934887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_56906022_56909861_56910018_56911347_56912233_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
tx.3832	chr14	+	2931	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	8	0	8	0	multi-exon	FALSE	canonical	3	627	junction_4	88.7108193370776	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1786	False	NA	NA	False	NA	NA	NA	56905712	56934887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
tx.3833	chr14	+	1571	5	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	7	18708	7	4745	5prime_fragment	FALSE	canonical	3	627	junction_4	106.552803811068	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTCGAGATGAGACT	1785	False	NA	NA	False	NA	NA	NA	56905711	56916179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020
tx.3834	chr14	+	1310	3	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	13	22690	13	763	5prime_fragment	FALSE	canonical	3	870	junction_1	10.5	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTGGTGGAGAACTTG	1791	False	NA	NA	False	NA	NA	NA	56905717	56912197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_56906022_56909861_56910018_56911347
tx.3835	chr14	-	3035	8	FSM	ENSMUSG00000040123.18	ENSMUST00000111285.9	5351	8	-19	2335	-19	405	multi-exon	FALSE	canonical	3	22	junction_6	24.4798959581623	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8802	False	NA	NA	False	NA	NA	NA	57049192	57030379	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
tx.3836	chr14	-	2923	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-29	403	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTATTTTTGTTTTCTTG	8792	False	NA	NA	False	NA	NA	NA	57049202	57030381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
tx.3837	chr14	-	1453	8	FSM	ENSMUSG00000021947.12	ENSMUST00000022517.9	1497	8	3	41	3	-41	multi-exon	TRUE	canonical	3	19	junction_7	4.40778532015472	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGCTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	57635983	57512490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600378_57600506_57620214_57620323_57635864
tx.3838	chr14	+	3073	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	15	0	-3	0	multi-exon	TRUE	canonical	3	32	junction_12	10.0195009855781	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	NA	False	NA	NA	NA	57661533	57755393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
tx.3839	chr14	+	763	3	ISM	ENSMUSG00000040040.17	ENSMUST00000154492.2	4226	23	83114	0	27574	0	3prime_fragment	FALSE	canonical	3	42	junction_2	3.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	NA	False	NA	NA	NA	57744676	57755393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_57744729_57754437_57754549_57754793
tx.384	chr1	-	2544	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	6	4	6	-3	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	285	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	125363458	125320645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
tx.3840	chr14	-	845	5	FSM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	-7	-2	-7	1	multi-exon	FALSE	canonical	3	133	junction_4	52.3115665986023	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCATGAGGTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	57809033	57787052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
tx.3841	chr14	-	672	4	NIC	ENSMUSG00000021951.8	novel	880	5	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	119.268138615847	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCATGAGGTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	57809023	57787052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_57787337_57787818_57788100_57795490_57795574_57808999
tx.3842	chr14	+	719	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	34	4372	-4	-61	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	634	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAGAAAAGTGCTCTTA	NA	False	NA	NA	False	NA	NA	NA	58035670	58039723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
tx.3843	chr14	-	2272	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	-11	-1	-11	1	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGTTGCCAACTCT	NA	False	NA	NA	False	NA	NA	NA	58063631	58044016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
tx.3844	chr14	+	529	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	2	2346	2	2	multi-exon	FALSE	canonical	3	956	junction_1	0	460	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTCTCATACGGAATA	NA	False	NA	NA	False	NA	NA	NA	58063692	58064407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_58063780_58063965
tx.3845	chr14	-	2867	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	-18	2337	-18	652	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127751	58072496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
tx.3846	chr14	-	2800	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-28	652	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127761	58072496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
tx.3847	chr14	+	3668	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	235	0	-13	0	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	59438911	59474714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
tx.3848	chr14	-	1333	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	0	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	39.5924235176378	206	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	59607998	59586180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
tx.3849	chr14	-	1503	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5079	0	intron_retention	FALSE	canonical	3	300	junction_3	34.2669260690571	124	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	59607998	59586180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
tx.385	chr1	+	2743	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	-10	0	-10	0	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTAAGCGATGACAT	NA	False	NA	NA	False	NA	NA	NA	125488742	125523557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
tx.3850	chr14	-	2999	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	-4	0	-4	0	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTGATTATTAT	NA	False	NA	NA	False	NA	NA	NA	59678337	59639457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
tx.3851	chr14	+	1502	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	-16	1551	-7	-1551	multi-exon	FALSE	canonical	3	224	junction_1	43.2892596379287	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGATTGCTTATGGAA	NA	False	NA	NA	False	NA	NA	NA	59678413	59784801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
tx.3852	chr14	-	2234	10	FSM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	0	-32	0	32	multi-exon	FALSE	canonical	3	30	junction_1	34.1362556619393	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	59835393	59801392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
tx.3853	chr14	-	837	5	FSM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	2	1740	0	-1740	multi-exon	FALSE	canonical	3	110	junction_3	7.29297607290741	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	NA	False	NA	NA	False	NA	NA	NA	59835393	59823761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
tx.3854	chr14	+	515	4	Antisense	novelGene_ENSMUSG00000021983.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGCTGAATAAAATTCTG	NA	False	NA	NA	False	NA	NA	NA	60414666	60421698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr14_+_60414791_60415313_60415515_60420871_60421044_60421680
tx.3855	chr14	+	3827	14	FSM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	-18	4	-18	-4	multi-exon	FALSE	canonical	3	64	junction_3	13.0256915000032	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTTTGAGTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	60502658	60539815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
tx.3856	chr14	-	1004	6	FSM	ENSMUSG00000060548.14	ENSMUST00000225730.2	744	6	-96	-164	-37	3	multi-exon	FALSE	canonical	3	37	junction_5	18.2756668824971	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTAGCAAATTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	61275436	61211806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
tx.3857	chr14	-	676	5	ISM	ENSMUSG00000060548.14	ENSMUST00000225730.2	744	6	-96	22014	-37	-22014	5prime_fragment	FALSE	canonical	3	37	junction_4	19.6532440070335	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGTCTAGAAAGCCCT	NA	False	NA	NA	False	NA	NA	NA	61275436	61233984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
tx.3858	chr14	+	2028	2	FSM	ENSMUSG00000043157.9	ENSMUST00000055159.8	1482	2	-61	-485	-61	485	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGGAAGGTGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	61547140	61549870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_61547387_61548088
tx.3859	chr14	-	849	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	-6	9249	-6	-1226	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGTGTGACTTAGTAG	NA	False	NA	NA	False	NA	NA	NA	61597894	61578439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
tx.386	chr1	+	1035	5	FSM	ENSMUSG00000026349.15	ENSMUST00000149760.8	1040	5	26	-21	26	21	multi-exon	FALSE	canonical	3	475	junction_4	23.7539470404394	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACAGCTTTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	127701926	127723558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991
tx.3860	chr14	-	4046	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	22	1	22	-1	multi-exon	TRUE	canonical	2	379	junction_16	73.5790391347971	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACATTGAAAGACTTAT	6568	False	NA	NA	False	NA	NA	NA	61677301	61602660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
tx.3861	chr14	-	2727	3	ISM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	69383	-4	2600	4	3prime_fragment	FALSE	canonical	3	460	junction_1	79	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	6935	False	NA	NA	False	NA	NA	NA	61607940	61602655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_61605179_61605576_61605672_61607831
tx.3862	chr14	-	2081	6	NNC	ENSMUSG00000021930.15	novel	4002	5	NA	NA	-12	426	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	67.8751795577735	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATTTTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	61794219	61771327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61792219_61792301_61793969
tx.3863	chr14	-	1554	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	147	2301	19	11	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTAAATATTCTTCC	NA	False	NA	NA	False	NA	NA	NA	61794188	61771742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
tx.3864	chr14	+	1452	2	Genic_Genomic	ENSMUSG00000114902.2	novel	864	1	NA	NA	-1783	156	multi-exon	FALSE	canonical	2	2	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGCTTAGAAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	61794463	61797266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr14_+_61794890_61796240
tx.3865	chr14	+	1631	3	FSM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	46	junction_1	100	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	61835683	61843395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_61835796_61837242_61837345_61841978
tx.3866	chr14	+	1581	3	FSM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	-31	0	-31	0	multi-exon	FALSE	canonical	3	148	junction_1	49	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	61836957	61843395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_61837020_61837242_61837345_61841978
tx.3867	chr14	+	1521	2	ISM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	252	0	252	0	3prime_fragment	FALSE	canonical	3	246	junction_1	0	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	61837240	61843395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_61837345_61841978
tx.3868	chr14	+	988	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	25	481	25	-481	multi-exon	TRUE	canonical	3	538	junction_2	112.951139879153	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	NA	False	NA	NA	NA	62569541	62609960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
tx.3869	chr14	+	880	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-481	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	NA	False	NA	NA	NA	62569541	62609960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
tx.387	chr1	+	2860	4	FSM	ENSMUSG00000026349.15	ENSMUST00000125760.8	665	4	38	-2233	38	22	multi-exon	FALSE	canonical	3	495	junction_3	16.8193010820572	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAGCTTTGGAAAGC	NA	False	NA	NA	False	NA	NA	NA	127701938	127723559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094
tx.3870	chr14	+	653	3	FSM	ENSMUSG00000054763.10	ENSMUST00000067990.8	618	3	-42	7	-42	-7	multi-exon	FALSE	canonical	3	33	junction_1	3	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAATTTCCCGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	63284397	63286052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_63284500_63284892_63285068_63285676
tx.3871	chr14	+	569	4	NIC	ENSMUSG00000054763.10	novel	618	3	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	14.3527000944073	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCGTTTCAAATTCACC	NA	False	NA	NA	False	NA	NA	NA	63284398	63286059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_63284500_63284892_63285068_63285676_63285752_63285841
tx.3872	chr14	+	1951	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	22	2770	22	1290	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	1135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTGCAGTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	63359932	63380602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
tx.3873	chr14	-	1677	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-67	1250	-63	-1250	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	431	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTTGTCTTTCTCAT	4244	False	NA	NA	False	NA	NA	NA	63415309	63383851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
tx.3874	chr14	-	1558	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	323	0	-13	0	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	2742	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	NA	False	NA	NA	NA	63746218	63729795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
tx.3875	chr14	-	2184	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	253	133	253	-133	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGGACTAACAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	63781178	63761058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
tx.3876	chr14	+	1471	8	NNC	ENSMUSG00000021958.6	novel	1295	7	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	31.4324672910034	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGAGCCTTTCACATGA	4022	False	NA	NA	False	NA	NA	NA	64097747	64157304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64130171_64130283_64156545
tx.3877	chr14	+	1360	7	FSM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	-65	0	-65	0	multi-exon	FALSE	canonical	3	56	junction_4	11.9443152447793	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGAGCCTTTCACATGA	4022	False	NA	NA	False	NA	NA	NA	64097747	64157304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
tx.3878	chr14	-	1340	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14988	-4	2	4	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGCTGTGAGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	64678364	64360069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
tx.3879	chr14	+	406	5	ISM	ENSMUSG00000021975.10	ENSMUST00000224593.2	3476	8	-9	17748	-9	-17748	5prime_fragment	FALSE	canonical	3	242	junction_3	12.031209415516	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAGCACACAGGATTCACA	NA	False	NA	NA	False	NA	NA	NA	65187741	65230501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422
tx.388	chr1	+	4220	24	FSM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	21	2	5	-2	multi-exon	FALSE	canonical	3	104	junction_1	17.6995509005001	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3050	False	NA	NA	False	NA	NA	NA	127796530	127871603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
tx.3880	chr14	+	2421	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	254	-1	-3	1	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGTTCTATTGCACTA	NA	False	NA	NA	False	NA	NA	NA	65187747	65277282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
tx.3882	chr14	+	1281	8	FSM	ENSMUSG00000034532.10	ENSMUST00000224629.2	3781	8	31	2469	-6	1	multi-exon	FALSE	canonical	2	16	junction_5	3.88087934491604	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGTGAAAGGTCCTG	2569	False	NA	NA	False	NA	NA	NA	65504097	65558951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_65504233_65508148_65508285_65524580_65524617_65531232_65531440_65532841_65533007_65536634_65536865_65540548_65540652_65558682
tx.3883	chr14	-	1511	4	ISM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	43584	0	43582	0	3prime_fragment	FALSE	canonical	3	434	junction_3	16.1314048434171	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3806	False	NA	NA	False	NA	NA	NA	65786917	65767897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868
tx.3884	chr14	-	2840	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	11	0	11	0	multi-exon	FALSE	canonical	3	390	junction_14	46.0192949772602	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3455	False	NA	NA	False	NA	NA	NA	65830513	65767897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
tx.3885	chr14	-	2798	15	FSM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	-27	0	-4	0	multi-exon	FALSE	canonical	3	153	junction_14	90.9467493893531	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3440	False	NA	NA	False	NA	NA	NA	65830528	65767897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
tx.3887	chr14	+	3794	9	FSM	ENSMUSG00000022032.15	ENSMUST00000022610.15	3794	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	7.61474720525902	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGATAAGTGGTCCA	818	False	NA	NA	False	NA	NA	NA	65903851	66002275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_65904196_65908005_65908124_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
tx.3888	chr14	+	1495	8	NIC	ENSMUSG00000022033.10	novel	451	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	250.309767272148	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	66043678	66055271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_66043752_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
tx.3889	chr14	-	2850	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	68	-5	-18	5	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCAGTGGCTTGTGAGA	6412	False	NA	NA	False	NA	NA	NA	66071375	66056481	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
tx.389	chr1	-	4060	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-19	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_20	44.9244922063678	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTATGGGTACGT	NA	False	NA	NA	False	NA	NA	NA	128030803	127881920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128030743
tx.3890	chr14	-	583	3	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	70	12375	-16	13	5prime_fragment	FALSE	canonical	3	1081	junction_1	21	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGAGTTTAACTGCCAA	6414	False	NA	NA	False	NA	NA	NA	66071373	66068861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_66069244_66070112_66070191_66071250
tx.3891	chr14	+	2173	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	57	0	-1	0	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATTGATATCTGAATTC	NA	False	NA	NA	False	NA	NA	NA	66074807	66104056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
tx.3892	chr14	+	1649	9	FSM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	161	0	2	0	multi-exon	TRUE	canonical	3	13	junction_1	2.72717802865893	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGGGTCTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	66206092	66218996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_66206138_66209180_66209302_66210773_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
tx.3893	chr14	+	1393	7	ISM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	4931	1	-1255	-1	3prime_fragment	FALSE	canonical	3	13	junction_3	2.75378527364305	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTTGGGTCTGTTTTTT	948	False	NA	NA	False	NA	NA	NA	66210862	66218995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
tx.3894	chr14	-	2294	12	FSM	ENSMUSG00000034450.9	ENSMUST00000059970.9	2263	12	-31	0	-31	0	multi-exon	FALSE	canonical	2	4	junction_5	1.97086212624353	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGCCCTTGAGGAAT	NA	False	NA	NA	False	NA	NA	NA	66246687	66224234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_66225144_66225630_66225722_66227827_66227993_66228478_66228629_66234272_66234350_66235008_66235117_66237282_66237469_66240039_66240131_66241530_66241626_66243285_66243412_66245487_66245590_66246493
tx.3895	chr14	-	2058	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	-19	-4	-19	1	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTGTTCTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	66361968	66321821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
tx.3896	chr14	+	2249	4	NNC	ENSMUSG00000046204.15	novel	5518	3	NA	NA	-27	-1265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.7756811551038	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAACTTCTGAACTTTAG	NA	False	NA	NA	False	NA	NA	NA	67148591	67154999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_67148743_67151755_67151933_67152770_67152900_67153207
tx.3897	chr14	+	2022	3	FSM	ENSMUSG00000046204.15	ENSMUST00000089236.11	5518	3	24	3472	-14	-1264	multi-exon	FALSE	canonical	3	15	junction_1	6.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTTCTGAACTTTAGT	NA	False	NA	NA	False	NA	NA	NA	67148642	67155000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_67148743_67152770_67152900_67153207
tx.3898	chr14	-	1322	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	3	1913	3	121	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	421	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGAGCCGCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	67246323	67224600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
tx.3899	chr14	-	2477	11	NIC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	-10	4	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	281.93305943078	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGGTTTTCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	67309903	67253118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67275386_67275458_67276323_67276422_67307683_67307759_67309538
tx.39	chr1	-	1035	4	FSM	ENSMUSG00000079658.10	ENSMUST00000186948.7	641	4	-22	-372	2	-3	multi-exon	FALSE	canonical	3	147	junction_3	1146.38165062465	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCATCTTGTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	16727264	16712993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727135
tx.390	chr1	-	2045	12	NNC	ENSMUSG00000036086.17	novel	1913	13	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	69.5979006047958	12	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATATGTGTGATTGGTGC	NA	False	NA	NA	False	NA	NA	NA	128030202	127914845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_127915137_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
tx.3900	chr14	-	2409	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-10	1611	-10	7	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTTTCTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	67309903	67253115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
tx.3901	chr14	-	1099	3	ISM	ENSMUSG00000022052.10	ENSMUST00000225251.2	2192	11	49886	-4	2363	4	3prime_fragment	FALSE	canonical	3	746	junction_1	20.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGGTTTTCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	67259745	67253118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_67254103_67257164_67257257_67259722
tx.3902	chr14	-	1402	4	ISM	ENSMUSG00000022052.10	ENSMUST00000225251.2	2192	11	49001	-4	1478	4	3prime_fragment	FALSE	canonical	3	643	junction_3	60.5768566001535	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGGTTTTCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	67260630	67253118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474
tx.3903	chr14	-	3285	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	202	354	-33	-354	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTAATTTCTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	67952857	67914157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
tx.3904	chr14	-	3572	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	10	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATTGTTCAAATCGGTC	NA	False	NA	NA	False	NA	NA	NA	67953049	67913797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
tx.3905	chr14	-	2762	14	FSM	ENSMUSG00000048922.19	ENSMUST00000132705.8	2034	14	192	-920	-43	920	multi-exon	FALSE	canonical	0	0	junction_1	101.200837286337	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTATCCTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	67952867	67916829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
tx.3906	chr14	+	2896	11	NIC	ENSMUSG00000034327.18	novel	3157	11	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	8	junction_4	42.5188193627245	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	NA	False	NA	NA	NA	67953581	67979609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_67953631_67962006_67962129_67963775_67963820_67966098_67966196_67966672_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
tx.3907	chr14	+	2218	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	-43	1205	-43	-1205	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCTGTGGTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	68321268	68325339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
tx.3908	chr14	+	2056	2	ISM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	2664	12	2664	-12	3prime_fragment	FALSE	canonical	3	158	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAATTCAATGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	68323975	68326532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_68324256_68324756
tx.3909	chr14	-	919	5	ISM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	2080	-4	-100	3	3prime_fragment	FALSE	canonical	3	174	junction_3	13.5531361684298	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	NA	False	NA	NA	NA	69942862	69934752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582
tx.391	chr1	+	2181	8	FSM	ENSMUSG00000056211.14	ENSMUST00000190288.2	6449	8	4269	-1	4269	0	multi-exon	FALSE	canonical	3	218	junction_7	13.5796967295042	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	128138997	128165473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
tx.3910	chr14	-	1651	7	FSM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	311	-4	311	3	multi-exon	FALSE	canonical	3	174	junction_3	17.7333646616265	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	NA	False	NA	NA	NA	69944631	69934752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502
tx.3911	chr14	-	1736	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	-7	-3	-7	3	multi-exon	FALSE	canonical	3	88	junction_7	41.9007573844168	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	NA	False	NA	NA	NA	69945040	69934752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
tx.3912	chr14	-	2673	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-24	0	-17	0	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	NA	False	NA	NA	NA	69970007	69954448	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
tx.3913	chr14	+	1861	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	6	1312	6	425	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGCTGTTTACTGTTA	NA	False	NA	NA	False	NA	NA	NA	70004926	70020548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
tx.3914	chr14	+	1525	9	FSM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	0	242	0	-242	multi-exon	FALSE	canonical	3	54	junction_3	8.98523093748847	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTACTTTAACTGACAC	NA	False	NA	NA	False	NA	NA	NA	70337553	70375413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
tx.3915	chr14	-	2029	10	ISM	ENSMUSG00000022091.7	ENSMUST00000227259.2	2481	21	12274	-464	12274	0	3prime_fragment	FALSE	canonical	3	14	junction_5	4.24554959434284	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCTGCTTCATTA	NA	False	NA	NA	False	NA	NA	NA	70429798	70417916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429534
tx.3916	chr14	-	1993	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	83	-44	83	5	multi-exon	FALSE	canonical	3	137	junction_3	15.9910689359494	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTTCTGCTCACAT	1971	False	NA	NA	False	NA	NA	NA	70680647	70676191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
tx.3917	chr14	-	2039	9	FSM	ENSMUSG00000000776.14	ENSMUST00000000793.13	2016	9	-18	-5	-18	5	multi-exon	FALSE	canonical	3	137	junction_3	16.2244992218558	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTTCTGCTCACAT	1713	False	NA	NA	False	NA	NA	NA	70680905	70676191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
tx.3918	chr14	+	1052	5	FSM	ENSMUSG00000033595.8	ENSMUST00000226548.2	1001	5	-42	-9	0	9	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTGCTATTATTTACA	NA	False	NA	NA	False	NA	NA	NA	70768267	70771177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_70768711_70769507_70769580_70770214_70770287_70770616_70770689_70770784
tx.3919	chr14	+	1623	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	-56	-2	47	2	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTCTTCACATCTCAT	6511	False	NA	NA	False	NA	NA	NA	70782737	70786375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
tx.392	chr1	+	2193	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	134	1786	134	572	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGATCTTATTTTTG	228	False	NA	NA	False	NA	NA	NA	128172032	128205329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
tx.3920	chr14	+	1726	7	FSM	ENSMUSG00000033589.5	ENSMUST00000226563.2	1444	7	49	-331	49	-1	multi-exon	FALSE	canonical	3	251	junction_2	32.9313258497471	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTCTCTTCACATCT	6513	False	NA	NA	False	NA	NA	NA	70782739	70786372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_70783179_70783916_70783990_70784369_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
tx.3921	chr14	+	1423	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	217	2286	7	4	multi-exon	FALSE	canonical	3	39	junction_1	3	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGCCTAAATGTCTG	NA	False	NA	NA	False	NA	NA	NA	70815293	70817725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_70815551_70816351_70816566_70816773
tx.3922	chr14	-	2818	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	NA	False	NA	NA	NA	70864563	70841109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
tx.3923	chr14	-	1739	5	FSM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	-50	0	-50	0	multi-exon	FALSE	canonical	3	21	junction_3	15.3195136998535	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	70879758	70873642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_70874464_70875906_70876014_70876241_70876420_70878971_70879009_70879162
tx.3924	chr14	+	2183	15	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	-41	7	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	6.89720440261332	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGACGAACAACTTCT	NA	False	NA	NA	False	NA	NA	NA	73380390	73420129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
tx.3925	chr14	+	783	4	FSM	ENSMUSG00000022106.15	ENSMUST00000165646.8	591	4	-144	-48	-26	1	multi-exon	FALSE	canonical	3	34	junction_2	3.29983164553722	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCCAACTCACTGTGCT	NA	False	NA	NA	False	NA	NA	NA	73380405	73392653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270
tx.3926	chr14	-	1306	5	FSM	ENSMUSG00000022108.9	ENSMUST00000226722.2	935	5	103	-474	103	-185	multi-exon	FALSE	canonical	3	633	junction_1	98.2776678599976	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGAGACTGTGCGTTG	NA	False	NA	NA	False	NA	NA	NA	73605842	73599850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738
tx.3927	chr14	-	1611	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	0	185	0	-185	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGAGACTGTGCGTTG	NA	False	NA	NA	False	NA	NA	NA	73622729	73599850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
tx.3928	chr14	+	1333	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	0	-5	0	5	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	321	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTCAATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	73747464	73755990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
tx.3929	chr14	+	1582	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	13	-132	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	493.082346064022	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTCTCTTTTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	73790218	73833091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828238_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
tx.393	chr1	+	2239	13	NNC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	91	572	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_6	101.309858848979	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGATCTTATTTTTG	185	False	NA	NA	False	NA	NA	NA	128171989	128205329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188567_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
tx.3930	chr14	+	1618	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	120	491	19	-132	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	811	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTCTCTTTTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	73790224	73833091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
tx.3931	chr14	-	1699	2	Genic_Genomic	ENSMUSG00000057886.6	novel	552	1	NA	NA	-75	1106	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCCTCCCAGAAATGGT	NA	False	NA	NA	False	NA	NA	NA	74193066	74191333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr14_-_74192826_74192859
tx.3932	chr14	+	1069	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	12	907	-10	10	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	679	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTTACCACCATTC	NA	False	NA	NA	False	NA	NA	NA	74969748	74987298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
tx.3933	chr14	-	2796	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	32	760	0	-760	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCTCTCTGTAGACC	NA	False	NA	NA	False	NA	NA	NA	76024445	75998316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
tx.3934	chr14	+	815	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	238	116	0	2	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	8741	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAACTCTTTGCTGTGA	1076	False	NA	NA	False	NA	NA	NA	76082770	76085739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
tx.3935	chr14	-	1525	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-54	-4	-54	4	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCAACTGTTATCACTG	NA	False	NA	NA	False	NA	NA	NA	76248359	76134372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
tx.3936	chr14	-	1227	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-43	4205	-43	-4205	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTCTCCTTTTGTATAAA	NA	False	NA	NA	False	NA	NA	NA	76348243	76327880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
tx.3937	chr14	+	1676	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	6	2292	6	-2292	multi-exon	FALSE	canonical	3	441	junction_7	36.4295362461713	205	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGTGTCTGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	76348336	76372527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
tx.3938	chr14	-	658	2	Antisense	novelGene_ENSMUSG00000022010.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTACAGCCGATTGAG	NA	False	NA	NA	False	NA	NA	NA	76732488	76708603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr14_-_76709172_76732398
tx.3939	chr14	+	1487	3	FSM	ENSMUSG00000022010.20	ENSMUST00000177207.2	1476	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	21	junction_1	1157	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGTGTTTCTATATGAC	6264	False	NA	NA	False	NA	NA	NA	76741642	76745203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_76741734_76742688_76742738_76743856
tx.394	chr1	-	2934	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	-24	0	-24	0	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	1063	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	NA	False	NA	NA	NA	128287425	128259326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
tx.3940	chr14	+	1728	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	32	2	-20	0	multi-exon	FALSE	canonical	3	2255	junction_1	40	107	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGTGTTTCTATATGAC	6571	False	NA	NA	False	NA	NA	NA	76741949	76745203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_76742282_76742688_76742738_76743856
tx.3941	chr14	-	1041	2	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTAAAATATTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	76753205	76751987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr14_-_76752575_76752751
tx.3942	chr14	-	1079	2	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTTCTTAAAATATTG	NA	False	NA	NA	False	NA	NA	NA	76753204	76751992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr14_-_76752575_76752707
tx.3943	chr14	+	1517	4	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10649	9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	6.54896090146283	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACCCTCCTGTTCACTG	NA	False	NA	NA	False	NA	NA	NA	76753382	76768195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_76753538_76764032_76764202_76766569_76766669_76767101
tx.3944	chr14	+	518	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10648	9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	0	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACCCTCCTGTTCACTG	NA	False	NA	NA	False	NA	NA	NA	76753383	76768195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_76753538_76766569_76766669_76767930
tx.3945	chr14	+	652	4	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10613	9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	4.24264068711928	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACCCTCCTGTTCACTG	NA	False	NA	NA	False	NA	NA	NA	76753418	76768195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_76753538_76764032_76764202_76766569_76766669_76767930
tx.3946	chr14	+	1525	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10607	228	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	3.5	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCATGGAGTTCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	76753424	76768414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_76753538_76766569_76766669_76767101
tx.3947	chr14	+	717	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	230	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1.5	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGGAGTTCAGTTTACC	NA	False	NA	NA	False	NA	NA	NA	76753425	76768416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_76753538_76766569_76766669_76767910
tx.3948	chr14	-	639	2	ISM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	16749	-4	16383	2	3prime_fragment	FALSE	canonical	3	106	junction_1	0	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTGCGAGTTACCGA	NA	False	NA	NA	False	NA	NA	NA	76777549	76770251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_76770687_76777345
tx.3949	chr14	+	624	2	NIC	ENSMUSG00000101009.7	novel	1412	4	NA	NA	376	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGCCTTCACGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	76915469	76924547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_76915820_76924273
tx.395	chr1	-	2156	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	19	0	19	0	multi-exon	TRUE	canonical	3	1712	junction_8	135.919976456737	1869	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	NA	False	NA	NA	NA	128345077	128291443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
tx.3950	chr14	-	1477	5	ISM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	2486	2	1926	-2	3prime_fragment	FALSE	canonical	3	38	junction_3	13.7931142241337	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	NA	False	NA	NA	NA	77271595	77261641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444
tx.3951	chr14	-	2426	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	16	2	16	-2	multi-exon	FALSE	canonical	3	38	junction_3	13.9737362978714	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	NA	False	NA	NA	NA	77274065	77261641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
tx.3952	chr14	+	1268	4	FSM	ENSMUSG00000034795.15	ENSMUST00000095625.11	1195	4	-22	-51	-12	-2	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAACACCTCTGAAGAT	NA	False	NA	NA	False	NA	NA	NA	77274199	77349695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_77274412_77305299_77305394_77306276_77306390_77348846
tx.3953	chr14	-	662	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	0	5531	0	3	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	208	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGCTTTTCCACATCA	NA	False	NA	NA	False	NA	NA	NA	78112366	78063651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
tx.3954	chr14	-	914	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	10	-6	10	6	multi-exon	FALSE	canonical	3	129	junction_2	11.7046999107196	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAAAGCTGCCTTATTT	NA	False	NA	NA	False	NA	NA	NA	79539075	79526189	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
tx.3955	chr14	-	2838	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	25	10360	25	7	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	79628193	79573068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
tx.3957	chr14	+	1803	11	FSM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	0	-4	0	4	multi-exon	FALSE	canonical	3	73	junction_10	10.5683489722851	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCCTACAGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	79635211	79661031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_79635477_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650426_79650545_79653317_79653455_79656627_79656727_79660836
tx.3958	chr14	+	601	4	ISM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	15217	-58	15003	58	3prime_fragment	FALSE	canonical	3	73	junction_3	11.3431330181157	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCATAGAGTTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	79650428	79661085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_79650545_79653317_79653455_79656627_79656727_79660836
tx.3959	chr14	-	2231	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	474	999	-84	14	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGGGTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	79718486	79698375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
tx.396	chr1	-	887	3	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGCATGTGTGACTT	4688	False	NA	NA	False	NA	NA	NA	128354966	128347421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_128347901_128348078_128348367_128354846
tx.3960	chr14	-	1408	8	NIC	ENSMUSG00000022023.7	novel	1512	11	NA	NA	-100	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	112.21899144448	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCTATGTATCTGTTA	NA	False	NA	NA	False	NA	NA	NA	79718502	79699091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_79699570_79703622_79703790_79704712_79704904_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
tx.3961	chr14	+	1110	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	63	6219	-55	0	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	422	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	79825193	79866417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
tx.3962	chr14	-	2255	5	ISM	ENSMUSG00000022021.15	ENSMUST00000227666.2	3337	27	-63	263822	2	39856	5prime_fragment	FALSE	canonical	3	183	junction_1	18.2002747232013	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTTAATTGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	87378669	87273318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
tx.3963	chr14	-	2243	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-6	3	-6	-3	multi-exon	FALSE	canonical	3	792	junction_1	24.5	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTCCTTTTGATA	NA	False	NA	NA	False	NA	NA	NA	99283562	99271982	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_99273947_99277950_99278097_99283429
tx.3964	chr14	+	923	2	FSM	ENSMUSG00000022070.8	ENSMUST00000226823.2	1071	2	165	-17	10	17	multi-exon	FALSE	canonical	3	218	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAGCAAAATGAGCAATT	NA	False	NA	NA	False	NA	NA	NA	99283822	99285365	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_99284117_99284736
tx.3965	chr14	+	2706	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	20	0	20	0	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	99283832	99311976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
tx.3966	chr14	-	2524	19	ISM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	2067	2068	1227	-4	3prime_fragment	FALSE	canonical	3	393	junction_13	28.27946949753	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	4594	False	NA	NA	False	NA	NA	NA	99335139	99314709	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020
tx.3967	chr14	+	2805	18	FSM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-7	-1	-7	1	multi-exon	FALSE	canonical	2	66	junction_8	18.7005171736119	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTGTAGAGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	99337335	99491930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
tx.3969	chr14	+	1138	3	ISM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	2769	1603	2306	-1603	3prime_fragment	FALSE	canonical	3	3503	junction_2	111	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAAAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	99538895	99550869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_99539691_99540853_99540914_99550586
tx.397	chr1	-	2732	10	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	18.9912260443255	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTCCTGTAATATT	NA	False	NA	NA	False	NA	NA	NA	130390206	130366761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
tx.3971	chr14	-	855	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	-10	-326	-10	-4	multi-exon	FALSE	canonical	3	50	junction_2	193.5	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTTATGACGTGTCT	NA	False	NA	NA	False	NA	NA	NA	101877903	101871205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_101871829_101874389_101874543_101877824
tx.3972	chr14	-	871	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.5	25	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTTATGACGTGTCT	NA	False	NA	NA	False	NA	NA	NA	101877904	101871205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_-_101871829_101874389_101874543_101877809
tx.3973	chr14	+	1036	9	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2073.6511278419	8	2	1	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	109	False	NA	NA	False	NA	NA	NA	101891421	101933561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101911571_101911695_101928007_101928084_101932594_101932654_101933337
tx.3974	chr14	+	910	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1532.99751720448	395	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	112	False	NA	NA	False	NA	NA	NA	101891424	101933561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
tx.3975	chr14	+	1185	4	FSM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	25	60	-2	-60	multi-exon	FALSE	canonical	0	0	junction_1	2159.4787951417	5	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTCTCGTTTTCACTA	115	False	NA	NA	False	NA	NA	NA	101891427	101905198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427
tx.3976	chr14	+	1099	9	NIC	ENSMUSG00000022111.10	novel	935	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2079.10599402123	2	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	115	False	NA	NA	False	NA	NA	NA	101891427	101933561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101923006_101923199_101928007_101928084_101932594_101932654_101933337
tx.3977	chr14	+	893	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	1518.39837745338	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	115	False	NA	NA	False	NA	NA	NA	101891427	101933561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_101891542_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
tx.3978	chr14	+	2335	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	110	0	110	0	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTGCATCTTGTATCTT	NA	False	NA	NA	False	NA	NA	NA	103307761	103315064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
tx.3979	chr14	+	371	2	ISM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	109	5767	109	-1435	5prime_fragment	FALSE	canonical	3	258	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTCAAATGGTTACT	NA	False	NA	NA	False	NA	NA	NA	103307760	103309297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_103307904_103309069
tx.398	chr1	-	2413	9	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	21.5982493503525	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTGTCTCCTGTAATA	NA	False	NA	NA	False	NA	NA	NA	130390442	130366763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
tx.3981	chr14	-	2141	9	ISM	ENSMUSG00000091509.8_ENSMUSG00000022119.16	ENSMUST00000163545.8	3270	22	37737	-910	-8786	910	3prime_fragment	FALSE	canonical	3	77	junction_8	52.6444441513062	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTGTGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	105376559	105351490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526
tx.3982	chr14	+	1655	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	40	0	-25	0	multi-exon	TRUE	canonical	3	137	junction_7	99.9552961302691	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCCTCGTTTAGTGATT	NA	False	NA	NA	False	NA	NA	NA	105496227	105546305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
tx.3983	chr14	+	2301	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	231	0	-14	0	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTATTTCTTGTATT	NA	False	NA	NA	False	NA	NA	NA	105496238	105546732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
tx.3984	chr14	-	1693	12	FSM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	-8	-3	0	1	multi-exon	FALSE	canonical	3	141	junction_8	15.4084875183551	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTTTATTTTGT	242	False	NA	NA	False	NA	NA	NA	118370167	118349884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
tx.3985	chr14	+	1876	9	FSM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	145	junction_5	22.6463987203264	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTAGCATTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	118374568	118400673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
tx.3987	chr14	+	662	2	FSM	ENSMUSG00000090534.2	ENSMUST00000164755.2	2322	2	497	1163	-151	-1163	multi-exon	FALSE	canonical	3	20	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	118474140	118475008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_118474357_118474562
tx.3988	chr14	+	1658	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-10	3493	-10	-3493	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTATTATTATTTTT	2319	False	NA	NA	False	NA	NA	NA	119175377	119215616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
tx.399	chr1	-	2520	10	FSM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	13	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	13.0705587551887	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTGTCTCCTGTAATA	NA	False	NA	NA	False	NA	NA	NA	130390468	130366763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
tx.3991	chr14	+	3970	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-35	583	-35	-2	multi-exon	TRUE	canonical	3	890	junction_17	126.92017018583	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1796	False	NA	NA	False	NA	NA	NA	121148600	121184828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
tx.3993	chr14	+	1871	9	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	23612	-18	23612	18	3prime_fragment	FALSE	canonical	3	1174	junction_2	90.6220689181173	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTCTGTCGTTGATTC	NA	False	NA	NA	False	NA	NA	NA	121176870	121184848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
tx.3994	chr14	+	2329	8	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	24975	-574	24975	-7	3prime_fragment	FALSE	canonical	3	1174	junction_1	96.8784215985612	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAATGATTTGCATTAC	NA	False	NA	NA	False	NA	NA	NA	121178233	121185404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
tx.3995	chr14	+	2149	7	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	25799	-581	25799	0	3prime_fragment	FALSE	canonical	3	1201	junction_3	93.8398458367588	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	NA	False	NA	NA	False	NA	NA	NA	121179057	121185411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
tx.3997	chr14	+	2112	8	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	-20	1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	124.704057836208	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	8866	False	NA	NA	False	NA	NA	NA	122116011	122258447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122231636_122231883_122246202_122246326_122257361
tx.3998	chr14	+	2155	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-15	-1	-15	1	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	8871	False	NA	NA	False	NA	NA	NA	122116016	122258447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
tx.3999	chr14	+	1725	6	NIC	ENSMUSG00000041765.7	novel	688	5	NA	NA	55	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	151.832275883621	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	2065	False	NA	NA	False	NA	NA	NA	122183780	122258447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_+_122183879_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
tx.4	chr1	+	2334	7	NIC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	-18	-4	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	282.033094984732	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATTGCTTTATATAGTAC	NA	False	NA	NA	False	NA	NA	NA	4878100	4916958	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_4878206_4878677_4878710_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
tx.40	chr1	-	666	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	294	0	81	multi-exon	TRUE	canonical	3	1066	junction_3	717.825574603995	662	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGGTTTGCTTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	16727266	16713284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
tx.400	chr1	-	2673	9	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-44	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	25.6855990780826	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTTGTCTCCTGTAA	NA	False	NA	NA	False	NA	NA	NA	130390232	130366765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
tx.4000	chr14	+	923	2	FSM	ENSMUSG00000071229.4	ENSMUST00000045976.7	913	2	-11	1	-11	-1	multi-exon	FALSE	canonical	3	25	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTTCTTTGTAACTG	NA	False	NA	NA	False	NA	NA	NA	122272074	122275831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_122272425_122275258
tx.4001	chr14	+	2792	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	44	271	44	-271	multi-exon	TRUE	canonical	3	817	junction_12	125.603480743967	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	NA	False	NA	NA	NA	122344493	122396745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
tx.4002	chr14	+	1047	4	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	43770	271	43540	-271	3prime_fragment	FALSE	canonical	3	989	junction_1	174.264167286336	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	4148	False	NA	NA	False	NA	NA	NA	122388219	122396745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_122388298_122389375_122389488_122392739_122392912_122396060
tx.4003	chr14	+	1240	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	-9	0	-9	0	multi-exon	FALSE	canonical	3	643	junction_7	45.2372430997437	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	NA	False	NA	NA	NA	122419106	122639646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
tx.4004	chr14	+	978	5	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	-4	24033	-4	-24026	5prime_fragment	FALSE	canonical	3	648	junction_1	14.6180539060437	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGGGTCTACTCGGTT	NA	False	NA	NA	False	NA	NA	NA	122419111	122615613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195
tx.4005	chr14	+	1686	3	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	7	29566	7	-29559	5prime_fragment	FALSE	canonical	3	648	junction_1	10.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATTAATTCA	NA	False	NA	NA	False	NA	NA	NA	122419122	122610080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_122419194_122548655_122548843_122608652
tx.4006	chr14	+	1259	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19437	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	209.063900005989	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	NA	False	NA	NA	NA	122514889	122639646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
tx.4007	chr14	-	3296	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	1472	-1	1472	1	multi-exon	FALSE	canonical	3	83	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGCTACATTTTATCC	NA	False	NA	NA	False	NA	NA	NA	122701617	122694205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_122697188_122701303
tx.4008	chr14	+	2487	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	-11	116	-3	0	multi-exon	FALSE	canonical	3	76	junction_1	20.0942015919555	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	122771739	123127240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
tx.4009	chr14	+	1142	10	ISM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	0	230857	0	-5240	5prime_fragment	FALSE	canonical	3	76	junction_1	11.3409560421782	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTCTTCCATGACT	NA	False	NA	NA	False	NA	NA	NA	122771750	122896499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089
tx.401	chr1	-	1919	2	ISM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	1967	986	1872	-986	3prime_fragment	FALSE	canonical	3	221	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTGTTTTCATTCTCA	2204	False	NA	NA	False	NA	NA	NA	131064110	131056177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_131057983_131063996
tx.4010	chr14	-	1077	3	FSM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	34	junction_2	3	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTGGTCCTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	123150575	123128271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_123129229_123137887_123137945_123150512
tx.4011	chr14	-	3386	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	30	0	-13	0	multi-exon	TRUE	canonical	3	136	junction_13	13.8696352514015	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	123220665	123156382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
tx.4012	chr14	-	3310	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	38.2839509410142	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	123220683	123156382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
tx.4015	chr15	-	213	2	ISM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	25	10322	25	-6127	5prime_fragment	FALSE	canonical	3	229	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAAAGCAAATGTGAAGT	2205	False	NA	NA	False	NA	NA	NA	4025201	4021838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_4021947_4025096
tx.4016	chr15	+	3172	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	279	76	-22	-76	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTCTAAGAGTGCCAT	NA	False	NA	NA	False	NA	NA	NA	4056143	4184750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
tx.4017	chr15	+	414	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	-41	462	-41	1	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	508	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGGTGATCTAAGGTA	2207	False	NA	NA	False	NA	NA	NA	5146085	5148160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
tx.4018	chr15	+	965	3	FSM	ENSMUSG00000041841.9	ENSMUST00000227635.2	925	3	-39	-1	10	1	multi-exon	FALSE	canonical	3	15185	junction_2	4434.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGGTGATCTAAGGTA	2258	False	NA	NA	False	NA	NA	NA	5146136	5148160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_5146905_5147100_5147186_5148048
tx.4019	chr15	+	599	4	FSM	ENSMUSG00000041841.9	ENSMUST00000227463.2	556	4	-40	-3	16	1	multi-exon	FALSE	canonical	3	713	junction_1	9620.00361515294	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGGTGATCTAAGGTA	2264	False	NA	NA	False	NA	NA	NA	5146142	5148160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_5146409_5146768_5146905_5147100_5147186_5148048
tx.402	chr1	+	1994	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	15	0	15	0	multi-exon	FALSE	canonical	3	546	junction_5	43.4650340351123	417	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	131080932	131101215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
tx.4020	chr15	+	1588	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	14	-2952	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTTATTTCTTTGATG	NA	False	NA	NA	False	NA	NA	NA	5173356	5208421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
tx.4021	chr15	+	1736	9	FSM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	-11	2893	-11	-2893	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACCAAGTTATATATATG	NA	False	NA	NA	False	NA	NA	NA	5173361	5208480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
tx.4022	chr15	+	1656	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	15	0	15	0	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTCCTTTTATTCTT	NA	False	NA	NA	False	NA	NA	NA	5215020	5247817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
tx.4023	chr15	+	1661	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	157	14	-10	-14	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGTCAAAAAAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	5215197	5247803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
tx.4024	chr15	-	1290	3	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTGTTGTATTATCT	NA	False	NA	NA	False	NA	NA	NA	6074155	6054170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr15_-_6055131_6073729_6073988_6074083
tx.4025	chr15	+	843	7	FSM	ENSMUSG00000050310.10	ENSMUST00000226201.2	2633	7	0	1790	0	-1790	multi-exon	FALSE	canonical	3	76	junction_1	4.31083905212585	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGCCTTCCTTGATTGAT	NA	False	NA	NA	False	NA	NA	NA	6737861	6786306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941
tx.4026	chr15	-	2036	18	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_14	101.173084758669	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCCTTTCTGTTATGG	NA	False	NA	NA	False	NA	NA	NA	8128670	7902535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108757_8111945_8112067_8123159_8123244_8128439_8128506_8128602
tx.4027	chr15	-	2132	18	FSM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	-1	-5	-1	-2	multi-exon	FALSE	canonical	3	158	junction_1	88.3053055575902	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTCCTTTCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	8128676	7902537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
tx.4028	chr15	-	1658	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	18	-546	0	546	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTCTGATTATTTTGA	NA	False	NA	NA	False	NA	NA	NA	8128675	8121164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
tx.4029	chr15	-	287	2	Antisense	novelGene_ENSMUSG00000022142.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCATTGTGTCCTGTAT	NA	False	NA	NA	False	NA	NA	NA	8138785	8133009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr15_-_8133247_8138735
tx.403	chr1	-	692	2	ISM	ENSMUSG00000026425.16	ENSMUST00000189893.7	3171	5	-1	162997	-1	-88348	5prime_fragment	FALSE	canonical	3	122	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAAGGAAAACAT	NA	False	NA	NA	False	NA	NA	NA	131455091	131452760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_131453332_131454970
tx.4030	chr15	-	3888	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	275	0	7	0	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	8739973	8663607	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
tx.4031	chr15	-	2235	5	FSM	ENSMUSG00000005360.15	ENSMUST00000153455.8	1252	5	-73	-910	7	910	multi-exon	FALSE	canonical	3	13	junction_1	23.8156986040721	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTGCACATATTTTT	NA	False	NA	NA	False	NA	NA	NA	8739973	8709094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_8710661_8717194_8717297_8717771_8717910_8738045_8738324_8739822
tx.4032	chr15	-	2129	4	NIC	ENSMUSG00000005360.15	novel	1252	5	NA	NA	7	906	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	28.3313724811677	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGGTTGCACATAT	NA	False	NA	NA	False	NA	NA	NA	8739973	8709098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_8710661_8717771_8717910_8738045_8738324_8739822
tx.4033	chr15	-	3107	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	11	0	-2	0	multi-exon	TRUE	canonical	3	163	junction_7	20.0690167197789	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGAGCTGCTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	9140441	9112072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
tx.4034	chr15	+	925	5	FSM	ENSMUSG00000039676.5	ENSMUST00000042360.5	949	5	25	-1	25	1	multi-exon	FALSE	canonical	3	64	junction_4	9.67923034130297	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCTCCTTTGAAGCTG	22	False	NA	NA	False	NA	NA	NA	9436138	9466125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_9436254_9457782_9457920_9461742_9461921_9462676_9462887_9465840
tx.4035	chr15	+	358	2	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTGGTCGTGTCGTTCTT	984	False	NA	NA	False	NA	NA	NA	9557194	9560641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_+_9557498_9560586
tx.4036	chr15	-	1217	8	ISM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	9335	7	226	2	3prime_fragment	FALSE	canonical	3	660	junction_1	75.8117970465585	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCTTTCTGCTTCAG	9300	False	NA	95	True	NA	NA	NA	10461267	10446848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205
tx.4037	chr15	-	1240	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	25	1399	-13	-1399	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	396	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTATTCTTTTCAGA	NA	False	NA	NA	False	NA	NA	NA	10486008	10476263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
tx.4039	chr15	+	1584	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_5	316.528039832177	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTTACTGTACTGTCC	32	False	NA	NA	False	NA	NA	NA	10486131	10493766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
tx.404	chr1	+	1398	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	-44	837	-44	-837	multi-exon	FALSE	canonical	3	32	junction_2	3.29983164553722	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAACGTTTACTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	131455596	131466773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
tx.4040	chr15	+	1480	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	28	6	-3	-1	multi-exon	FALSE	canonical	3	345	junction_1	183.88039590995	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTACTGTACTGTCCTGT	32	False	NA	NA	False	NA	NA	NA	10486131	10493769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
tx.4041	chr15	+	1410	7	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	324.625639091486	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTTACTGTACTGTCC	35	False	NA	NA	False	NA	NA	NA	10486134	10493766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_10486368_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
tx.4042	chr15	+	1554	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	4	1019	4	600	multi-exon	FALSE	canonical	3	110	junction_2	9.36416040016402	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAGTGGTTTTAAGTT	53	False	NA	NA	False	NA	NA	NA	10981845	10995693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
tx.4043	chr15	-	2623	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	21	1361	21	343	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	177	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGACCTCTGTCCTCA	NA	False	NA	NA	False	NA	NA	NA	11399730	11383747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
tx.4045	chr15	-	684	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	52	2636	6	66	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	4292	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	861	False	NA	NA	False	NA	NA	NA	11996092	11984060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
tx.4046	chr15	+	645	3	FSM	ENSMUSG00000022201.17	ENSMUST00000124621.2	513	3	-46	-86	-11	86	multi-exon	FALSE	canonical	3	26	junction_2	305.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAACATTTTTACCAT	29	False	NA	NA	False	NA	NA	NA	12117905	12122509	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_12118034_12118324_12118425_12122092
tx.4047	chr15	-	3726	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	6	234	-2	-234	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	NA	False	NA	NA	NA	12824729	12808496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
tx.4048	chr15	-	3423	8	FSM	ENSMUSG00000022195.8	ENSMUST00000228177.2	3156	8	-32	-235	-2	-234	multi-exon	FALSE	canonical	3	21	junction_6	133.553321920192	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	NA	False	NA	NA	NA	12824729	12808496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818214_12821489_12821640_12824552
tx.4049	chr15	+	2052	20	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	53921	45	76	-44	3prime_fragment	FALSE	canonical	3	549	junction_3	90.2774731628263	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	NA	False	NA	NA	False	NA	NA	NA	12878869	12935332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
tx.405	chr1	+	1206	6	FSM	ENSMUSG00000026433.14	ENSMUST00000027693.8	1226	6	20	0	20	0	multi-exon	FALSE	canonical	3	23	junction_1	27.6506781110337	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGTTGTGATGCTGGG	NA	False	NA	NA	False	NA	NA	NA	131794997	131800625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_131795149_131795256_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
tx.4050	chr15	+	776	7	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	90530	45	36685	-44	3prime_fragment	FALSE	canonical	3	681	junction_1	86.6506395437064	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	NA	False	NA	NA	False	NA	NA	NA	12915478	12935332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
tx.4051	chr15	+	387	3	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	104008	45	50163	-44	3prime_fragment	FALSE	canonical	3	780	junction_2	57	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	4858	False	NA	NA	False	NA	NA	NA	12928956	12935332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_12929042_12929750_12929798_12935077
tx.4052	chr15	+	977	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	773	1052	773	2	multi-exon	TRUE	canonical	3	450	junction_2	26.9962960422351	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTATTTGAGCAGTGTT	739	False	NA	NA	False	NA	NA	NA	25985224	25997515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
tx.4053	chr15	+	1440	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	115	0	-26	0	multi-exon	FALSE	canonical	3	65	junction_3	1.69967317119759	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTCTTACGGTTCAG	106	False	NA	NA	False	NA	NA	NA	31224574	31274487	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
tx.4054	chr15	-	1744	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	28	81	28	-81	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	3858	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTCTGCAGTTACTGCT	NA	False	NA	NA	False	NA	NA	NA	31601922	31591026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
tx.4055	chr15	+	1138	5	FSM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	13	13	13	-13	multi-exon	FALSE	canonical	3	10	junction_1	6.68954408012983	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATTTAGCTTTATAACC	128	False	NA	NA	False	NA	NA	NA	31602276	31617668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_31602296_31606056_31606335_31608241_31608380_31609711_31609763_31617016
tx.4056	chr15	+	696	2	FSM	ENSMUSG00000039065.12	ENSMUST00000160146.2	4655	2	269	3690	3	2	multi-exon	FALSE	canonical	2	2	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCGTGACAAGGAGTGTT	118	False	NA	NA	False	NA	NA	NA	31602266	31617683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_31602296_31617016
tx.4057	chr15	+	3278	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	44	205	44	-205	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGTATAGACTCACAT	70	False	NA	NA	False	NA	NA	NA	32920912	33034876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
tx.4058	chr15	+	829	2	FSM	ENSMUSG00000022255.17	ENSMUST00000172082.2	4582	2	-7	3760	-7	-3760	multi-exon	FALSE	canonical	3	602	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTTGGGAACGCATAT	20	True	NA	NA	False	NA	NA	NA	34082832	34099731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_34083560_34099629
tx.4059	chr15	+	1661	9	ISM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-16	11269	9	11	5prime_fragment	FALSE	canonical	3	477	junction_6	54.812749429307	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAGAAGAAGCAAG	36	False	NA	NA	False	NA	NA	NA	34082848	34134501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436
tx.406	chr1	+	1308	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	42	-148	26	0	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGTTGTGATGCTGGG	NA	False	NA	NA	False	NA	NA	NA	131795003	131800625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
tx.4060	chr15	+	977	4	ISM	ENSMUSG00000022255.17	ENSMUST00000171711.2	1200	5	824	-2	824	2	3prime_fragment	TRUE	canonical	3	531	junction_3	19.258475767539	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCATTTATCATTTATTTA	79	False	NA	NA	False	NA	NA	NA	34134459	34141431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_34134545_34136832_34136974_34139886_34140044_34140837
tx.4061	chr15	+	1807	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	95	0	-26	0	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	368	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	85	False	NA	NA	False	NA	NA	NA	34238268	34284448	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
tx.4062	chr15	-	545	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	30	-5	30	0	multi-exon	FALSE	canonical	3	4307	junction_1	558.07426825548	606	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	391	False	NA	NA	False	NA	NA	NA	34443338	34440650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
tx.4063	chr15	-	506	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	380	0	-1	0	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	1425	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	323	False	NA	NA	False	NA	NA	NA	34443406	34440650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
tx.4064	chr15	-	978	6	FSM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	25	1	25	-1	multi-exon	FALSE	canonical	3	250	junction_4	17.7245592328836	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTTTTTAATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	34495376	34484167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
tx.4065	chr15	+	3287	16	FSM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	0	-12	0	1	multi-exon	FALSE	canonical	3	39	junction_3	10.1552394796425	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTTGTTTTTAATCTG	94	False	NA	NA	False	NA	NA	NA	34495468	34530795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
tx.4066	chr15	+	2034	9	ISM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	14587	-12	3	1	3prime_fragment	FALSE	canonical	3	42	junction_3	7.57359722985055	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTTGTTTTTAATCTG	NA	False	NA	NA	False	NA	NA	NA	34510055	34530795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
tx.4067	chr15	-	2883	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	31	0	-25	0	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	False	NA	NA	False	NA	NA	NA	35155921	34875641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
tx.4068	chr15	+	1841	4	NIC	ENSMUSG00000022330.6	novel	1724	4	NA	NA	-29	6	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	14.8548533034381	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGATTCATCTTGCTAG	88	False	NA	NA	False	NA	NA	NA	35296214	35303457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_35296614_35300334_35301102_35302057_35302158_35302882
tx.4069	chr15	+	1741	4	FSM	ENSMUSG00000022330.6	ENSMUST00000022952.6	1724	4	-17	0	-17	0	multi-exon	FALSE	canonical	3	27	junction_3	10.1434160364686	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTCTTGAGATTCATCT	100	False	NA	NA	False	NA	NA	NA	35296226	35303451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_35296614_35300334_35301102_35302057_35302158_35302964
tx.407	chr1	-	535	2	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTAAGGTTTGTGTTTGT	6628	False	NA	NA	False	NA	NA	NA	131821199	131802004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_131802419_131821078
tx.4070	chr15	+	3743	20	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-8	-72469	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_19	14.5875900659951	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCATTTGTCTTCTGA	138	False	NA	NA	False	NA	NA	NA	35371683	35570629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35569975
tx.4071	chr15	-	428	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	74	1	35	-1	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	5959	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGCTTGGTTATTAA	NA	False	NA	NA	False	NA	NA	NA	35938318	35932122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
tx.4072	chr15	+	472	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	21	-4	-2	1	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	273	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTCAATGTCTTG	130	False	NA	NA	False	NA	NA	NA	36174176	36177157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
tx.4073	chr15	+	583	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	19	-1	19	1	multi-exon	FALSE	canonical	3	181	junction_1	282.916948944385	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTCAATGTCTTG	151	False	NA	NA	False	NA	NA	NA	36174197	36177157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
tx.4074	chr15	+	1949	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	6	433	6	0	multi-exon	FALSE	canonical	3	39	junction_4	7	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTGGTGGCAGTTCT	78	False	NA	NA	False	NA	NA	NA	36210613	36235323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
tx.4075	chr15	-	3001	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-19	1295	-19	-877	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTTTCATGTTGAT	NA	False	NA	NA	False	NA	NA	NA	36283312	36241373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
tx.4076	chr15	-	2470	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	39	0	8	0	multi-exon	FALSE	canonical	3	250	junction_4	35.6195171219375	129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	36496927	36477813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
tx.4077	chr15	-	2229	15	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4589	-240	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	7.66418918858136	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCGCCAATTTGAATA	NA	False	NA	NA	False	NA	NA	NA	36560307	36504797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_36505617_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36556627_36556725_36560155
tx.4078	chr15	+	679	2	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTAGTCGTGGTG	NA	False	NA	NA	False	NA	NA	NA	36560451	36566203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_+_36560637_36565709
tx.4079	chr15	-	2818	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	-1	0	1	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	1704	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	NA	False	NA	NA	NA	36609217	36595903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
tx.408	chr1	+	691	3	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_2	1	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCTTTAGAATAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	131807796	131812562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_+_131807860_131811662_131811895_131812166
tx.4080	chr15	-	429	3	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTATCCTAGCTCATT	NA	False	NA	NA	False	NA	NA	NA	36658045	36652512	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_36652768_36655307_36655362_36657925
tx.4081	chr15	+	723	2	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGTTGTATAGCTGGTA	-1	True	NA	NA	False	NA	NA	NA	36726922	36731108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_+_36727213_36730675
tx.4082	chr15	-	2832	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	224	-934	-94	0	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	647	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	664	False	NA	NA	False	NA	NA	NA	36793857	36771013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
tx.4083	chr15	-	2230	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	274	784	267	15	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTAATGTAGCTTCCATC	13	True	NA	NA	False	NA	NA	NA	36794508	36771797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
tx.4084	chr15	-	2359	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	84	1974	84	1627	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	831	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTAATTTCTTGTACC	239	False	NA	NA	False	NA	NA	NA	37007562	36999244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
tx.4085	chr15	-	5386	3	ISM	ENSMUSG00000062397.9	ENSMUST00000226453.2	517	4	-25	-1798	-25	1627	intron_retention	TRUE	canonical	3	6501	junction_2	120	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTAATTTCTTGTACC	29	True	NA	NA	False	NA	NA	NA	37007284	36999244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_37001168_37002082_37002191_37003929
tx.4086	chr15	+	3015	3	ISM	ENSMUSG00000022286.17	ENSMUST00000161933.2	3617	9	29335	-7	12001	0	3prime_fragment	FALSE	canonical	3	68	junction_1	5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTCTAGTACTTTCTG	216	False	NA	NA	False	NA	NA	NA	37347981	37363813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_37348099_37358613_37358679_37360980
tx.4087	chr15	-	1513	9	FSM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	55	2993	55	300	multi-exon	FALSE	canonical	3	32	junction_4	8.71779788708135	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTACTTCAGTTTA	7163	False	NA	NA	False	NA	NA	NA	37961292	37927188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_37927642_37929281_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
tx.4088	chr15	-	961	8	ISM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	179	5061	5	-1768	5prime_fragment	FALSE	canonical	3	32	junction_3	9.17850194526229	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGTGGTTTTAGTTACT	7287	False	NA	NA	False	NA	NA	NA	37961168	37929256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
tx.4089	chr15	-	1854	5	ISM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	148	19306	-26	1790	5prime_fragment	FALSE	canonical	3	46	junction_2	5.71729831301464	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATTGGGAACAA	7256	False	NA	NA	False	NA	NA	NA	37961199	37943501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
tx.409	chr1	+	1315	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	-1	1061	-1	-1061	multi-exon	FALSE	canonical	3	331	junction_5	461.648284832608	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTGTCTCAGTCTTTT	9281	False	NA	NA	False	NA	NA	NA	131838270	131859356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
tx.4090	chr15	-	1350	7	ISM	ENSMUSG00000037487.8	ENSMUST00000228368.2	2953	8	2853	536	1900	-5	3prime_fragment	FALSE	canonical	3	850	junction_6	58.012690182599	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	8586	False	NA	NA	False	NA	NA	NA	37976425	37968107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303
tx.4091	chr15	+	604	3	Genic_Genomic	ENSMUSG00000115771.2	novel	462	1	NA	NA	-39	33476	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCTTTTGTTTCATA	197	False	NA	NA	False	NA	NA	NA	38079306	38113283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr15_+_38079488_38079665_38079746_38112940
tx.4092	chr15	-	3047	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	NA	False	NA	NA	NA	38300953	38294656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
tx.4093	chr15	-	3494	3	NIC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	2313	junction_2	18.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	NA	False	NA	NA	NA	38300950	38294656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_38297772_38297865_38298097_38300802
tx.4094	chr15	-	4044	12	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	145.774024145945	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTACTTTGATGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	38519510	38488479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501827_38514716_38514854_38519152
tx.4095	chr15	-	4217	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTACTTTGATGGCTT	NA	False	NA	NA	False	NA	NA	NA	38519507	38488481	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
tx.4096	chr15	-	4058	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	813	0	1	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTTACTTTGATGGC	NA	False	NA	NA	False	NA	NA	NA	38519510	38488483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
tx.4097	chr15	+	2058	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	11	2	0	1	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	493	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGCTAGTCATTTATT	195	False	NA	NA	False	NA	NA	NA	38662187	38692688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
tx.4098	chr15	+	1240	4	FSM	ENSMUSG00000054196.8	ENSMUST00000067072.5	1166	4	-74	0	-74	0	multi-exon	FALSE	canonical	3	14	junction_1	1.88561808316413	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGTTTATTTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	38940252	38950516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_38940555_38943877_38944100_38947660_38947878_38950017
tx.4099	chr15	-	2473	7	NNC	ENSMUSG00000022299.10	novel	5905	7	NA	NA	-13	8	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	35.1267546022813	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCCTTTCATTTACTTA	NA	False	NA	NA	False	NA	NA	NA	38976124	38954617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_38956051_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
tx.41	chr1	-	683	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	-7	1338	-7	79	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGATGGTTTGCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	16727115	16713286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
tx.410	chr1	+	2006	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	3	3989	3	-347	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGTGTGAAGCTCAGAT	9307	False	NA	NA	False	NA	NA	NA	131838296	131860070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
tx.4100	chr15	-	2854	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	2	3049	2	688	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCACTTGAGTTCTATCT	NA	False	NA	NA	False	NA	NA	NA	38976109	38957674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
tx.4101	chr15	+	1524	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	27	0	27	0	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	493	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	38976286	39010251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
tx.4102	chr15	+	3528	6	ISM	ENSMUSG00000037386.17	ENSMUST00000227381.2	4581	24	179309	-1918	29599	-1	3prime_fragment	FALSE	canonical	3	30	junction_1	8.62554346113913	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTTGTTGAGGGTGCT	NA	False	NA	NA	False	NA	NA	NA	39479701	39547767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
tx.4103	chr15	+	1784	6	FSM	ENSMUSG00000037386.17	ENSMUST00000226410.2	3685	6	-60	1961	-60	-42	multi-exon	FALSE	canonical	3	7	junction_1	17.2348484182484	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCTGAATATTTAAATTA	NA	False	NA	NA	False	NA	NA	NA	39522901	39545807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_39523323_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
tx.4104	chr15	+	2045	3	ISM	ENSMUSG00000022303.10	ENSMUST00000022913.6	1997	4	8165	3	8153	1	3prime_fragment	FALSE	canonical	3	14	junction_1	5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCTTGATCATGTGAC	NA	False	NA	NA	False	NA	NA	NA	39617492	39624331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_39618622_39622709_39623019_39623724
tx.4105	chr15	+	1796	3	ISM	ENSMUSG00000022303.10	ENSMUST00000227368.2	1825	4	8244	1	8232	-1	3prime_fragment	FALSE	canonical	3	10	junction_1	7	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCCTTGATCATGTG	NA	False	NA	NA	False	NA	NA	NA	39617571	39624329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_39618622_39622877_39623019_39623724
tx.4106	chr15	-	710	2	ISM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	72605	0	8386	0	3prime_fragment	FALSE	canonical	3	216	junction_1	0	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	39648261	39646092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_39646506_39647964
tx.4107	chr15	+	292	3	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_1	14.5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGCCTTAATTC	NA	False	NA	NA	False	NA	NA	NA	41210835	41215818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_+_41210883_41214473_41214592_41215691
tx.4108	chr15	+	2915	8	ISM	ENSMUSG00000022307.17	ENSMUST00000090095.13	4158	14	30821	-1	-10596	0	3prime_fragment	FALSE	canonical	3	180	junction_1	39.2298303824619	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	41683731	41724444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
tx.4109	chr15	-	1511	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	0	-5	0	5	multi-exon	TRUE	canonical	3	2495	junction_1	136.260065887095	1118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2663	False	NA	NA	False	NA	NA	NA	43146115	43113448	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
tx.411	chr1	-	841	5	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1951	6452	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	39.6169155790806	36	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGTAGAACAGGCCTC	NA	False	NA	NA	False	NA	NA	NA	132206198	132196001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_132196405_132196619_132196718_132202453_132202560_132202761_132202875_132206077
tx.4110	chr15	+	1219	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	22	-10	10	10	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	353	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTTCTTTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	43340646	43391169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
tx.4111	chr15	-	3019	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	425	-844	6	844	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTGATGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	44291278	44238622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
tx.4112	chr15	-	3028	10	FSM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	-15	2064	0	844	multi-exon	FALSE	canonical	3	89	junction_5	79.6338844685826	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTGATGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	44291284	44238622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
tx.4113	chr15	+	565	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	0	-7	0	7	multi-exon	FALSE	canonical	3	313	junction_1	272.243457221657	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTATTTTGGAATAAA	9616	False	NA	NA	False	NA	NA	NA	44291487	44299270	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
tx.4114	chr15	+	619	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-6	2387	-3	2	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTTTTTTATTTTGGA	9629	False	NA	NA	False	NA	NA	NA	44291500	44299265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
tx.4115	chr15	+	481	4	ISM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	1467	-1	1412	1	3prime_fragment	FALSE	canonical	3	895	junction_1	43.5150037981793	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTTTTTATTTTGG	NA	False	NA	NA	False	NA	NA	NA	44292954	44299264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_44293033_44295833_44295905_44297294_44297370_44299007
tx.4116	chr15	+	1525	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	132	288	-122	-1	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGCCTTCAGTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	44482702	44504623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
tx.4117	chr15	+	2268	7	FSM	ENSMUSG00000022339.10	ENSMUST00000022964.9	1613	7	-166	-489	-4	0	multi-exon	FALSE	canonical	3	4	junction_1	29.9467119322899	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAACTGATTTTCTGTGGC	NA	False	NA	NA	False	NA	NA	NA	44482820	44504911	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_44483339_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
tx.4118	chr15	+	1730	7	FSM	ENSMUSG00000022339.10	ENSMUST00000226165.2	1931	7	2	199	2	3	multi-exon	FALSE	canonical	2	3	junction_1	30.3076814612328	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATATCCTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	44482837	44504425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_44483304_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
tx.4119	chr15	-	1254	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	39	2	-30	-2	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	1731	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTGTGTATTTATGG	NA	False	NA	NA	False	NA	NA	NA	51728880	51649955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
tx.412	chr1	-	498	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	6210	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	53	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCTTCTTAATTTCGAG	NA	False	NA	NA	False	NA	NA	NA	132206195	132196243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
tx.4120	chr15	+	966	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	25	1930	-24	0	multi-exon	FALSE	canonical	3	321	junction_1	13	118	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCATCTTCAGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	51740849	51746080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_51741107_51744411_51744587_51745546
tx.4121	chr15	-	2270	6	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	21756	364	21519	-364	3prime_fragment	FALSE	canonical	3	690	junction_2	41.1757210015805	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	NA	False	NA	NA	NA	51833387	51825999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316
tx.4122	chr15	-	3558	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	34	364	34	-364	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	NA	False	NA	NA	NA	51855109	51825999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
tx.4124	chr15	+	910	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	-34	131	0	-131	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTACTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	52575803	52593829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
tx.4125	chr15	-	1499	10	FSM	ENSMUSG00000022422.14	ENSMUST00000110231.2	1499	10	6	-6	6	3	multi-exon	FALSE	canonical	3	26	junction_5	97.4314573887145	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCTGACTTCTTTAAG	NA	False	NA	NA	False	NA	NA	NA	54953870	54939491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54946800_54946990_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
tx.4126	chr15	-	1313	9	FSM	ENSMUSG00000022422.14	ENSMUST00000023059.13	1324	9	11	0	0	0	multi-exon	FALSE	canonical	3	218	junction_7	27.4268914571083	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCCTGACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	54953876	54939494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
tx.4127	chr15	+	1960	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	113	6474	6	-1405	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTTTTACCAATATTA	NA	False	NA	NA	False	NA	NA	NA	54975825	55116193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
tx.4128	chr15	-	802	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	421	0	22	0	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	406	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	NA	False	NA	NA	NA	55420723	55397489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
tx.4129	chr15	-	711	6	FSM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	19	0	19	0	multi-exon	FALSE	canonical	3	91	junction_4	366.126754007407	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	NA	False	NA	NA	NA	55420726	55397489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55418715_55418840_55420653
tx.413	chr1	+	2953	7	FSM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	-41	195	-41	0	multi-exon	FALSE	canonical	3	25	junction_6	6.54896090146283	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCTTGTTCACTTTGG	NA	False	NA	NA	False	NA	NA	NA	132243822	132261031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_132244211_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
tx.4130	chr15	+	1670	5	ISM	ENSMUSG00000022369.14	ENSMUST00000170046.8	3197	17	-181	45162	6	-3426	5prime_fragment	FALSE	canonical	3	167	junction_1	11.2249721603218	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGGTTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	55420809	55429047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008
tx.4131	chr15	+	2984	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	160	0	-27	0	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	NA	NA	NA	55420963	55489819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
tx.4132	chr15	-	2164	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-23	1034	-23	-1034	multi-exon	TRUE	canonical	3	365	junction_5	42.5977866628236	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTTATATAGTTACT	NA	False	NA	NA	False	NA	NA	NA	57755867	57733931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
tx.4133	chr15	+	3277	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	35	-1	0	1	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	57775629	57833458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
tx.4134	chr15	+	3556	17	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	-2	-1	-2	1	intron_retention	FALSE	canonical	3	200	junction_2	25.2003689209107	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCTGCATGTAATTGA	NA	False	NA	NA	False	NA	NA	NA	57775627	57822799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
tx.4135	chr15	+	627	2	NIC	ENSMUSG00000022364.15	novel	914	6	NA	NA	5225	2	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTGAACTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	57827033	57833459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_57827321_57833119
tx.4136	chr15	+	682	3	ISM	ENSMUSG00000022364.15	ENSMUST00000161329.2	914	6	5265	5	5265	1	3prime_fragment	FALSE	canonical	3	284	junction_1	37.5	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	57827073	57833458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_57827321_57831304_57831401_57833119
tx.4137	chr15	+	539	2	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	10969	1	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	0	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	57832777	57833458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_57832978_57833119
tx.4138	chr15	-	1340	6	FSM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	-10	11	0	0	multi-exon	FALSE	canonical	3	653	junction_4	117.266534015464	536	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCCAGGTAATTTCA	NA	False	NA	NA	False	NA	NA	NA	57897721	57885665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
tx.4139	chr15	-	2029	4	FSM	ENSMUSG00000022360.9	ENSMUST00000226649.2	2209	4	177	3	177	-1	multi-exon	FALSE	canonical	3	382	junction_3	7.84573486395988	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	57961995	57957442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754
tx.414	chr1	-	1328	2	FSM	ENSMUSG00000097760.3	ENSMUST00000180835.2	1540	2	17	195	17	-195	multi-exon	FALSE	canonical	3	3	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATTACATAAAGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132404766	132394365	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_132395387_132404459
tx.4140	chr15	+	1149	6	FSM	ENSMUSG00000022359.11	ENSMUST00000227142.2	786	6	-52	-311	-21	311	multi-exon	FALSE	canonical	2	3	junction_5	23.3203773554375	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTATTTTATTTAAAA	2639	False	NA	NA	False	NA	NA	NA	58004751	58019032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58018534
tx.4141	chr15	+	1392	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	-9	0	-9	0	multi-exon	FALSE	canonical	3	37	junction_4	11.5516232625549	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2651	False	NA	NA	False	NA	NA	NA	58004763	58022050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
tx.4142	chr15	+	1115	4	FSM	ENSMUSG00000022359.11	ENSMUST00000226889.2	394	4	-66	-655	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	30.9228430488243	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2654	False	NA	NA	False	NA	NA	NA	58004766	58022050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58021297
tx.4143	chr15	+	1238	5	FSM	ENSMUSG00000022359.11	ENSMUST00000228761.2	798	5	-19	-421	-4	0	multi-exon	FALSE	canonical	3	22	junction_3	18.5	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2656	False	NA	NA	False	NA	NA	NA	58004768	58022050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58016975_58017101_58021297
tx.4144	chr15	+	720	2	Antisense	novelGene_ENSMUSG00000022358.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATATGTTCCTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	58024830	58048285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr15_+_58025072_58047806
tx.4145	chr15	-	373	4	ISM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	24077	0	6528	0	3prime_fragment	FALSE	canonical	3	108	junction_3	7.11805216802087	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	NA	False	NA	NA	NA	58781499	58772822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421
tx.4146	chr15	-	926	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	-11	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	18.2181455270914	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	NA	False	NA	NA	NA	58805587	58772822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
tx.4147	chr15	-	862	11	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	26.3417918904542	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	NA	False	NA	NA	NA	58805587	58772822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58798284_58798335_58800532_58800599_58805527
tx.4148	chr15	+	667	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	41	-4	-11	4	multi-exon	FALSE	canonical	3	3308	junction_3	178.75557489364	668	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCTGAAGTGTTCTT	2857	False	NA	NA	False	NA	NA	NA	58805645	58811341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
tx.4149	chr15	+	2795	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-36	-1	-32	1	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	59186893	59203042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
tx.415	chr1	+	3502	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	68	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTATACATGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	132405116	132433399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
tx.4150	chr15	-	4036	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-3	0	-3	0	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	59246019	59203845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
tx.4151	chr15	+	1178	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	-44	-12	-6	0	multi-exon	FALSE	canonical	3	123	junction_4	348.219025608766	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	59246089	59473533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
tx.4152	chr15	+	1094	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	-40	0	0	0	multi-exon	FALSE	canonical	3	776	junction_4	74.7677886674618	374	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	59246095	59473533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
tx.4153	chr15	+	856	3	FSM	ENSMUSG00000097493.4	ENSMUST00000180730.3	3074	3	2220	-2	150	2	multi-exon	FALSE	canonical	1	1	junction_1	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTGAGTTCCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	60696339	60700501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_60696633_60699180_60699212_60699969
tx.4154	chr15	+	1216	6	NIC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	8.29457654133109	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGAAGTCATGATTGTC	NA	False	NA	NA	False	NA	NA	NA	61909860	62121376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62121006
tx.4155	chr15	-	1423	8	ISM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	53572	0	17146	0	3prime_fragment	FALSE	canonical	3	1084	junction_4	44.4062874753896	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63816246	63802790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171
tx.4156	chr15	-	1812	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	86	-2	73	0	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63932106	63802790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
tx.4157	chr15	-	1780	13	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_12	311.438095775067	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	63932306	63802790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932275
tx.4158	chr15	+	3976	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	-2	1241	-2	-1241	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	65658886	65744424	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
tx.4159	chr15	-	2885	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	1	3	0	-3	multi-exon	FALSE	canonical	2	22	junction_13	7.67854152818099	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGTGTCTTTTCCTC	NA	False	NA	NA	False	NA	NA	NA	66841488	66801169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
tx.416	chr1	+	2593	7	ISM	ENSMUSG00000026439.15	ENSMUST00000027700.15	3385	15	16614	-3	-9684	3	3prime_fragment	FALSE	canonical	3	281	junction_2	35.844184403548	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATACATGCTTGTTTG	4204	False	NA	NA	False	NA	NA	NA	132421786	132433400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
tx.4160	chr15	+	855	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	18	-2	-2	2	multi-exon	FALSE	canonical	3	479	junction_2	8	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTCATTGAAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	72962258	72965926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_72962433_72964681_72964809_72965372
tx.4162	chr15	+	1681	6	FSM	ENSMUSG00000059895.14	ENSMUST00000230177.2	1680	6	-2	1	-2	0	multi-exon	FALSE	canonical	3	26	junction_1	34.6028900527109	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	73596644	73629075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
tx.4163	chr15	-	3350	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	245	2258	245	-2258	multi-exon	FALSE	canonical	3	23	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCATGATTCTTCA	NA	False	NA	NA	False	NA	NA	NA	74581139	74576407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_74579714_74581095
tx.4164	chr15	+	955	3	FSM	ENSMUSG00000022598.7	ENSMUST00000023265.5	860	3	-94	-1	-94	1	multi-exon	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACCTGTGTCCTTAAGC	NA	False	NA	NA	False	NA	NA	NA	74586593	74588919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_74586756_74587869_74587978_74588234
tx.4165	chr15	+	1195	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	323	266	323	-266	multi-exon	FALSE	canonical	3	79	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGTGCCGGGGAGGTTC	4963	False	NA	NA	False	NA	NA	NA	74593375	74596222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_74593657_74595308
tx.4166	chr15	-	507	3	FSM	ENSMUSG00000022595.8	ENSMUST00000023260.5	513	3	1	5	1	-5	multi-exon	FALSE	canonical	2	7	junction_2	1.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTCCTGAGTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	74606177	74604100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_74604389_74604815_74604936_74606078
tx.4167	chr15	-	625	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	167	-1	167	1	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTGACTTCTGT	943	False	NA	NA	False	NA	NA	NA	74671668	74668721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
tx.4168	chr15	+	1158	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	-36	0	-36	0	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8351	False	NA	NA	False	NA	NA	NA	74827465	74831180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
tx.4169	chr15	+	740	4	NNC	ENSMUSG00000022587.15	novel	1122	4	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_3	242.845629979211	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8351	False	NA	NA	False	NA	NA	NA	74827465	74831180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_74827567_74829628_74829727_74830117_74830238_74830759
tx.417	chr1	-	1971	10	FSM	ENSMUSG00000054387.14	ENSMUST00000191212.7	2799	10	6	822	3	3	multi-exon	FALSE	canonical	3	144	junction_5	107.251521615728	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACATATCCAGTCAGTC	NA	False	NA	NA	False	NA	NA	NA	132953089	132918961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
tx.4170	chr15	+	1263	3	FSM	ENSMUSG00000022587.15	ENSMUST00000188503.2	1211	3	-51	-1	-36	1	multi-exon	FALSE	canonical	3	296	junction_1	177	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTATGTCCTGGTTGTC	8351	False	NA	NA	False	NA	NA	NA	74827465	74831181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_74827567_74829628_74829727_74830117
tx.4171	chr15	+	1158	4	FSM	ENSMUSG00000022587.15	ENSMUST00000190810.7	924	4	442	-676	-33	0	multi-exon	FALSE	canonical	3	397	junction_1	104.416899441081	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8354	False	NA	NA	False	NA	NA	NA	74827468	74831180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
tx.4172	chr15	-	856	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187994.7	955	4	100	-1	-3	0	multi-exon	FALSE	canonical	3	72	junction_1	7.54247233265651	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTTCTCCATTTTTCT	9608	False	NA	NA	False	NA	NA	NA	74869780	74866725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869727
tx.4173	chr15	-	876	4	NNC	ENSMUSG00000068348.5	novel	408	3	NA	NA	-297	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.9221356098901	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGTTTTTCTTTTGCT	1055	False	NA	NA	False	NA	NA	NA	75110914	75107053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_75107668_75109440_75109558_75110548_75110631_75110851
tx.4174	chr15	-	845	4	NNC	ENSMUSG00000068348.5	novel	408	3	NA	NA	-297	392	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	32.5678778348646	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGTTTTTCTTTTGCT	1055	False	NA	NA	False	NA	NA	NA	75110914	75107053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_75107668_75109440_75109558_75110548_75110631_75110882
tx.4175	chr15	-	957	3	Fusion	ENSMUSG00000068348.5_ENSMUSG00000101289.2	novel	408	3	NA	NA	-162	386	multi-exon	FALSE	canonical	0	0	junction_2	38	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAAGTCTCTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	75186975	75107059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr15_-_75107668_75109440_75109558_75186743
tx.4176	chr15	+	881	4	NNC	ENSMUSG00000022583.13	novel	877	4	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.74165738677394	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGATCTCAGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	75140236	75144085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_75140299_75140550_75140649_75141628_75141746_75143481
tx.4177	chr15	-	1905	14	FSM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	0	-2	0	2	multi-exon	FALSE	canonical	3	71	junction_8	11.6872458678823	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTGTCACTGTGACCT	NA	False	NA	NA	False	NA	NA	NA	75550649	75528881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
tx.4178	chr15	+	2286	15	FSM	ENSMUSG00000022580.14	ENSMUST00000121137.9	3360	15	-3	1077	-3	0	multi-exon	FALSE	canonical	1	1	junction_2	2.36578502309703	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTCTGAGTCGGGTAC	NA	False	NA	NA	False	NA	NA	NA	75576125	75586257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_75576324_75580019_75580136_75580837_75580967_75581085_75581162_75581862_75581941_75582303_75582429_75582514_75582682_75582836_75583031_75583402_75583560_75583639_75583748_75584105_75584301_75584850_75584928_75585067_75585215_75585298_75585461_75585900
tx.4179	chr15	+	892	4	NIC	ENSMUSG00000022580.14	novel	2146	11	NA	NA	-364	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	3.29983164553722	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGAGTCTGAGTCGGGT	NA	False	NA	NA	False	NA	NA	NA	75584072	75586255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_75584301_75585067_75585215_75585298_75585461_75585900
tx.418	chr1	-	1979	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	50	5076	-9	58	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGTTATGTAATGTT	NA	False	NA	NA	False	NA	NA	NA	132953104	132919033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
tx.4180	chr15	+	1566	11	NNC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17.3956891211587	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTTGAGGGGTACTG	NA	False	NA	NA	False	NA	NA	NA	75734125	75739257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_75734331_75735253_75735303_75735385_75735478_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
tx.4181	chr15	+	1824	11	FSM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	-32	0	-32	0	multi-exon	FALSE	canonical	3	30	junction_2	7.7614431647729	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTTGAGGGGTACTG	NA	False	NA	NA	False	NA	NA	NA	75734143	75739257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
tx.4182	chr15	-	1434	5	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	26.2916336502698	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTCCCATCAGATCCT	NA	False	NA	NA	False	NA	NA	NA	75754364	75741182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75748129_75748389_75754245
tx.4183	chr15	-	1175	4	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTCCCATCAGATCCT	NA	False	NA	NA	False	NA	NA	NA	75754364	75741182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
tx.4184	chr15	-	1296	4	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	35.5933826558939	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTCCCATCAGATCCT	NA	False	NA	NA	False	NA	NA	NA	75754403	75741182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744501_75754245
tx.4185	chr15	-	579	2	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGGCACACACATAGCC	NA	False	NA	NA	False	NA	NA	NA	75754364	75753062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_75753523_75754245
tx.4186	chr15	-	1729	13	FSM	ENSMUSG00000022574.8	ENSMUST00000023237.8	1898	13	162	7	-29	0	multi-exon	FALSE	canonical	3	20	junction_8	7.1351049201972	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGCCATGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	75766168	75762811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
tx.4187	chr15	-	980	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	49	1283	0	0	multi-exon	FALSE	canonical	3	2715	junction_5	241.1927842695	1818	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	NA	False	NA	NA	NA	75781155	75767336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
tx.4188	chr15	-	1302	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	40	-3	40	3	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	242	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGACTTTAGTAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	75793369	75788322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
tx.4189	chr15	-	400	2	ISM	ENSMUSG00000022570.8	ENSMUST00000230610.2	1431	10	3769	2	1154	-2	3prime_fragment	FALSE	canonical	3	481	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGAAGCTGGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	75797216	75796526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_75796844_75797133
tx.419	chr1	-	1911	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-9	58	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGTTATGTAATGTT	NA	False	NA	NA	False	NA	NA	NA	132953104	132919033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
tx.4190	chr15	-	1338	11	FSM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	-3	0	-3	0	multi-exon	FALSE	canonical	3	182	junction_10	87.2147349935778	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8916	False	NA	NA	False	NA	NA	NA	75801605	75796531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
tx.4191	chr15	-	1283	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	65	7	1	0	multi-exon	FALSE	canonical	3	225	junction_10	74.8304750753328	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8905	False	NA	NA	False	NA	NA	NA	75801616	75796531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
tx.4192	chr15	+	2401	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	87	-2	87	2	multi-exon	FALSE	canonical	3	106	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTAATTGGCATATC	NA	False	NA	NA	False	NA	NA	NA	75812887	75821251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_75813009_75818971
tx.4193	chr15	+	1752	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	53	-2	-3	2	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGTTCTTCAGCCTC	NA	False	NA	NA	False	NA	NA	NA	75841024	75847600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
tx.4194	chr15	-	1823	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	0	-2	0	2	multi-exon	FALSE	canonical	3	1143	junction_7	140.604729650179	444	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGTCCCTGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	75952761	75942036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
tx.4195	chr15	+	1741	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	-13	-3	-2	3	multi-exon	FALSE	canonical	3	70	junction_1	10.0567832276971	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTCTCCTTGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	76130961	76134107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
tx.4196	chr15	+	832	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	50	914	-18	668	multi-exon	FALSE	canonical	0	0	junction_1	330.5	243	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTACTGTACAGCACTT	929	False	NA	NA	False	NA	NA	NA	76211646	76213963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76211864_76213229_76213437_76213555
tx.4197	chr15	+	1185	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	10	325	0	3	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	1613	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	NA	False	NA	NA	NA	76227732	76230135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
tx.4198	chr15	-	1162	8	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	47.1584389833563	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8510	False	NA	NA	False	NA	NA	NA	76234914	76231239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234680
tx.4199	chr15	+	1680	8	FSM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	6	0	3	0	multi-exon	FALSE	canonical	3	425	junction_1	86.5157765487702	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	76235511	76238573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
tx.42	chr1	+	1643	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	-10	77	-7	3	multi-exon	FALSE	canonical	3	512	junction_1	10.5	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTATGTGTTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	16735423	16748422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_16735730_16737891_16737998_16747191
tx.420	chr1	-	1984	11	FSM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	-12	-58	-11	58	multi-exon	FALSE	canonical	3	161	junction_9	94.8116026654966	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGTTATGTAATGTT	NA	False	NA	NA	False	NA	NA	NA	132953106	132919033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
tx.4200	chr15	+	1633	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	18	0	3	0	multi-exon	FALSE	canonical	3	203	junction_1	163.413086179455	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	76235511	76238573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
tx.4201	chr15	+	1995	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGACTCTCCTGCAAGAG	3542	False	NA	NA	False	NA	NA	NA	76253095	76255637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
tx.4202	chr15	+	1901	6	NNC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	42.1454623892063	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACATCCAGACTCT	3545	False	NA	NA	False	NA	NA	NA	76253098	76255627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_76253741_76253851_76253901_76254055_76254155_76254361_76254454_76254531_76254655_76254731
tx.4203	chr15	+	2086	5	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	6	17	intron_retention	FALSE	canonical	3	81	junction_1	11.9268604418766	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTCTCCTGCGTGTTCT	3550	False	NA	NA	False	NA	NA	NA	76253103	76255654	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
tx.4204	chr15	-	2469	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	23	-1	23	1	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGCAGCAGAGTC	NA	False	NA	NA	False	NA	NA	NA	76361454	76337187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
tx.4206	chr15	-	1809	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	79	0	-46	0	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	NA	False	NA	NA	NA	76396072	76386214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
tx.4208	chr15	-	1729	9	FSM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	-21	2	-10	-2	multi-exon	TRUE	canonical	3	128	junction_8	22.8988946239769	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	NA	False	NA	NA	NA	76422956	76419922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
tx.4209	chr15	+	2281	3	FSM	ENSMUSG00000022560.10	ENSMUST00000230994.2	2889	3	-132	740	0	-740	multi-exon	FALSE	canonical	3	120	junction_1	0.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTGTTAATCCCATGAG	NA	False	NA	NA	False	NA	NA	NA	76423031	76425590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76423396_76423582_76423803_76423893
tx.421	chr1	+	3714	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	134	1746	-67	-1746	multi-exon	FALSE	canonical	3	372	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACCCCCCCCCCTTTTC	5701	False	NA	NA	False	NA	NA	NA	133059014	133065775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_133061354_133064400
tx.4210	chr15	+	2073	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	-2	3218	-2	-740	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTGTTAATCCCATGAG	NA	False	NA	NA	False	NA	NA	NA	76423029	76425590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
tx.4211	chr15	+	1999	15	FSM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	41	0	-6	0	multi-exon	FALSE	canonical	3	114	junction_10	17.9268638913668	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3143	False	NA	NA	False	NA	NA	NA	76460598	76480016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
tx.4212	chr15	+	2115	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	-16	3	intron_retention	FALSE	canonical	3	116	junction_9	17.5296874138817	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCGTTTTCTTTGTGTT	3086	False	NA	NA	False	NA	NA	NA	76460541	76480012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
tx.4213	chr15	-	4459	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	58	1	-22	-1	multi-exon	TRUE	canonical	3	484	junction_25	49.8187687746518	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	76491733	76480006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
tx.4214	chr15	-	2244	12	FSM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	514	-8	-22	0	multi-exon	FALSE	canonical	3	334	junction_11	41.2272476696326	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8644	False	NA	NA	False	NA	NA	NA	76501070	76496582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
tx.4215	chr15	-	1000	10	FSM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	-59	0	4	0	multi-exon	FALSE	canonical	3	74	junction_8	311.796586112021	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9612	False	NA	NA	False	NA	NA	NA	76510265	76506308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508919_76509333_76509406_76510188
tx.4216	chr15	-	906	10	FSM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	5	0	0	0	multi-exon	TRUE	canonical	3	892	junction_9	85.8889607589177	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9608	False	NA	NA	False	NA	NA	NA	76510269	76506308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
tx.4217	chr15	-	4197	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	39	-1	10	1	multi-exon	FALSE	canonical	3	178	junction_21	25.6881606970994	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	NA	False	NA	NA	NA	76524119	76510436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
tx.4218	chr15	-	1152	3	FSM	ENSMUSG00000053929.18	ENSMUST00000177359.2	1110	3	-38	-4	-38	3	multi-exon	FALSE	canonical	3	19	junction_2	30	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGAATTTGTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	76544355	76542335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76543066_76543418_76543640_76544154
tx.4219	chr15	-	1247	2	FSM	ENSMUSG00000053929.18	ENSMUST00000231152.2	1271	2	21	3	-2	3	multi-exon	FALSE	canonical	3	79	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGAATTTGTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	76543935	76542335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76543066_76543418
tx.422	chr1	+	756	3	NNC	ENSMUSG00000116158.2	novel	496	2	NA	NA	-1062	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	21.5	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	7792	False	NA	NA	False	NA	NA	NA	133253887	133257460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_133254146_133254947_133255079_133257093
tx.4220	chr15	-	1687	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	74	-396	-72	396	multi-exon	FALSE	canonical	3	304	junction_2	19.5	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTCTGGTATTGGGG	NA	False	NA	NA	False	NA	NA	NA	76554074	76552028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76553341_76553428_76553534_76553804
tx.4221	chr15	+	2808	12	FSM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	19	0	19	0	multi-exon	TRUE	canonical	3	37	junction_1	32.5360575565374	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	NA	False	NA	NA	NA	76555865	76579119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
tx.4222	chr15	+	2635	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	57	0	25	0	multi-exon	FALSE	canonical	3	82	junction_1	16.1864140562386	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	NA	False	NA	NA	NA	76555871	76579119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
tx.4223	chr15	+	1039	6	FSM	ENSMUSG00000022546.6	ENSMUST00000229140.2	982	6	-30	-27	-30	0	multi-exon	FALSE	canonical	3	10	junction_4	4.40908153700972	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGACTCACCTGACTGG	5959	False	NA	NA	False	NA	NA	NA	76582380	76583875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76582583_76582655_76582793_76582914_76583090_76583195_76583352_76583435_76583549_76583619
tx.4224	chr15	+	1584	5	FSM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	-3	665	-3	84	multi-exon	FALSE	canonical	3	46	junction_1	6.01560470775798	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCAGTTTGGATCTTCT	9240	False	NA	NA	False	NA	NA	NA	76585661	76587774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587462
tx.4225	chr15	+	2237	4	FSM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	4	2608	-1	0	multi-exon	FALSE	canonical	3	39	junction_1	34.1792659696229	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTGTTGCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	76594841	76599291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76595128_76597066_76597421_76597600_76598186_76598279
tx.4226	chr15	-	1376	4	FSM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	-9	2669	-9	-1268	multi-exon	FALSE	canonical	3	11	junction_3	4.24264068711928	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATGCAATAAAACGTTTA	NA	False	NA	NA	False	NA	NA	NA	76755644	76738477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852
tx.4227	chr15	+	1024	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	13	0	13	0	multi-exon	TRUE	canonical	3	114	junction_1	0	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	False	NA	NA	False	NA	NA	NA	76784122	76785505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76784193_76784551
tx.4228	chr15	+	1029	2	FSM	ENSMUSG00000055041.9	ENSMUST00000109793.3	920	2	5	-114	5	0	multi-exon	FALSE	canonical	3	59	junction_1	0	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	False	NA	NA	False	NA	NA	NA	76784140	76785505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76784216_76784551
tx.4229	chr15	+	844	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	7	0	7	0	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	6444	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	NA	False	NA	NA	NA	76788284	76790514	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
tx.423	chr1	+	714	2	FSM	ENSMUSG00000116158.2	ENSMUST00000178033.5	496	2	-218	0	-218	0	multi-exon	FALSE	canonical	3	48	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	8636	False	NA	NA	False	NA	NA	NA	133254731	133257460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_133255079_133257093
tx.4230	chr15	+	1054	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	-8	-3	-8	0	multi-exon	TRUE	canonical	1	74	junction_2	101.489839392917	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	76832697	76834932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
tx.4231	chr15	+	1111	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	3	-3	3	0	multi-exon	FALSE	canonical	1	74	junction_1	105.909814884594	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	76832724	76834932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
tx.4232	chr15	-	1252	10	ISM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	39937	4	18963	-2	3prime_fragment	FALSE	canonical	3	120	junction_5	25.9591321736663	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGCATTTCCACGTCT	NA	False	NA	NA	False	NA	NA	NA	76998017	76968003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804
tx.4233	chr15	-	1286	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	12	0	3	0	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	307	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGCTGTTCTGTGGGC	2727	False	NA	NA	False	NA	NA	NA	77813194	77799246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
tx.4234	chr15	-	1889	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	7	3	7	-3	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	448	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2752	False	NA	NA	False	NA	NA	NA	77855006	77843200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
tx.4235	chr15	-	1008	7	FSM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	5	0	5	0	multi-exon	FALSE	canonical	0	0	junction_3	104.002270274366	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	False	NA	NA	False	NA	NA	NA	78058302	78043662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
tx.4236	chr15	-	1131	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	13	0	13	0	multi-exon	FALSE	canonical	3	371	junction_1	0	133	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	8097	False	NA	NA	False	NA	NA	NA	78290094	78283755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_78284231_78289438
tx.4237	chr15	+	1263	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	57	-9	57	2	multi-exon	FALSE	canonical	3	16	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTGTGAGAATGTC	NA	False	NA	NA	False	NA	NA	NA	78294238	78298215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_78294865_78297578
tx.4238	chr15	+	1448	6	FSM	ENSMUSG00000033287.18	ENSMUST00000159771.8	986	6	-2	-460	-2	0	multi-exon	FALSE	canonical	3	32	junction_5	37.5819105421744	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	NA	False	NA	NA	NA	78312859	78323503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78322686
tx.4239	chr15	-	1348	7	FSM	ENSMUSG00000033220.8	ENSMUST00000043214.8	3038	7	4	1686	2	1042	multi-exon	FALSE	canonical	3	13	junction_3	5.64702478203247	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGGAAGTGCAGTGAGT	NA	False	NA	NA	False	NA	NA	NA	78456979	78445052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_78445686_78446105_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
tx.424	chr1	+	2281	8	FSM	ENSMUSG00000070644.14	ENSMUST00000135222.9	2297	8	-2	18	-2	2	multi-exon	FALSE	canonical	3	61	junction_5	9.79379228628721	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTCTTGGAAGGACAGT	NA	False	NA	NA	False	NA	NA	NA	133291307	133308056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_133291757_133293313_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
tx.4240	chr15	-	368	2	FSM	ENSMUSG00000116097.2	ENSMUST00000229702.2	394	2	26	0	26	0	multi-exon	FALSE	canonical	3	23	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGCTGTGGTCGGAGTAT	2879	False	NA	NA	False	NA	NA	NA	78465790	78458610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_78458873_78465684
tx.4241	chr15	-	1887	8	FSM	ENSMUSG00000018169.13	ENSMUST00000018313.6	1865	8	-22	0	-22	0	multi-exon	FALSE	canonical	3	144	junction_5	11.4749060731561	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	78657697	78640081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
tx.4242	chr15	+	2682	17	FSM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	352	0	-9	0	multi-exon	TRUE	canonical	3	379	junction_6	54.6157028701453	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	NA	False	NA	NA	NA	78761741	78778785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
tx.4243	chr15	+	2514	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	-139	0	-4	0	multi-exon	FALSE	canonical	3	356	junction_17	50.4832700370451	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	4394	False	NA	NA	False	NA	NA	NA	78783963	78796247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
tx.4244	chr15	+	530	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	1	269	0	5	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	317	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCCTTTCATGGGAGA	NA	False	NA	NA	False	NA	NA	NA	78810925	78814396	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
tx.4245	chr15	+	941	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	7	2773	7	1	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	78819139	78825065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
tx.4246	chr15	+	1314	6	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	182.547528057764	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	78819385	78825065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_78819895_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
tx.4247	chr15	+	2550	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	21	-1	-15	1	multi-exon	FALSE	canonical	3	125	junction_8	26.3687999246734	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTCTGTGGATGCTGG	NA	False	NA	NA	False	NA	NA	NA	78867261	78890065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
tx.4248	chr15	+	1766	8	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	-17	889	-17	-889	intron_retention	FALSE	canonical	3	1189	junction_6	79.2711698371289	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTCTGCTTTATTCTG	615	False	NA	NA	False	NA	NA	NA	78915056	78921664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952
tx.4249	chr15	+	1476	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	5	889	5	-889	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	280	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTCTGCTTTATTCTG	637	False	NA	NA	False	NA	NA	NA	78915078	78921664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
tx.425	chr1	-	491	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	10	2	10	-2	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	3467	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTTTCATTCTGGTG	NA	False	NA	NA	False	NA	NA	NA	133538019	133531610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
tx.4250	chr15	+	1910	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	27	5	27	-5	multi-exon	FALSE	canonical	3	1651	junction_4	129.272537257102	490	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTGTGGTCTCATT	NA	False	NA	NA	False	NA	NA	NA	78959405	78978600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
tx.4251	chr15	+	550	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	333	2	-9	-2	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	511	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCGTTACCTGCGTGC	NA	False	NA	NA	False	NA	NA	NA	79025541	79035972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
tx.4253	chr15	+	1829	13	FSM	ENSMUSG00000068206.14	ENSMUST00000163571.8	2054	13	207	18	-2	0	multi-exon	FALSE	canonical	3	17	junction_1	62.6245425798331	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4381	False	NA	NA	False	NA	NA	NA	79113579	79133666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
tx.4254	chr15	+	1968	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	9	0	9	0	multi-exon	FALSE	canonical	3	173	junction_9	26.1878894826512	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4392	False	NA	NA	False	NA	NA	NA	79113590	79133666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
tx.4255	chr15	-	3539	17	FSM	ENSMUSG00000042632.18	ENSMUST00000174021.8	3318	17	-211	-10	1	10	multi-exon	FALSE	canonical	3	78	junction_16	39.721638860324	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGTGCCATTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	79212375	79170417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
tx.4258	chr15	-	2656	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	17	2	combination_of_known_junctions	TRUE	canonical	3	24	junction_10	159.216487839671	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTCTGTCTGCCTCTTT	8036	False	NA	NA	False	NA	NA	NA	79326320	79302053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326292
tx.4259	chr15	-	2705	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	155.61375260561	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATACCCTCTGTCTGC	8423	False	NA	NA	False	NA	NA	NA	79339773	79302059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
tx.426	chr1	-	4452	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-62	6	0	-6	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	NA	False	NA	NA	NA	133589118	133547605	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
tx.4260	chr15	+	1394	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	17	0	17	0	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	False	NA	NA	False	NA	NA	NA	79400628	79411940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
tx.4261	chr15	-	2240	14	FSM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	-21	0	-20	0	multi-exon	FALSE	canonical	3	26	junction_6	20.9451241307391	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGATTCTGCATTCA	NA	False	NA	NA	False	NA	NA	NA	79489330	79445697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79472951_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
tx.4262	chr15	-	2075	12	FSM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	-30	-114	-20	0	multi-exon	FALSE	canonical	3	19	junction_5	21.834085113127	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGATTCTGCATTCA	NA	False	NA	NA	False	NA	NA	NA	79489330	79445697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
tx.4263	chr15	+	1133	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	15	-1	15	1	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTGTGTAGCAAAAATAGA	9574	False	NA	NA	False	NA	NA	NA	79543414	79551862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
tx.4265	chr15	+	780	2	ISM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	6644	0	4474	0	3prime_fragment	FALSE	canonical	3	203	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGTGTAGCAAAAATAG	3160	False	NA	NA	False	NA	NA	NA	79550043	79551861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_79550151_79551188
tx.4266	chr15	+	1028	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	8	533	8	187	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTATTGCTGTGTTTGTG	8186	False	NA	NA	False	NA	NA	NA	79555069	79557068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
tx.4267	chr15	-	1520	5	ISM	ENSMUSG00000022420.17	ENSMUST00000162713.9	1357	7	2524	-684	19	0	3prime_fragment	FALSE	canonical	3	63	junction_3	39.8591269347436	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	262	False	NA	NA	False	NA	NA	NA	79658649	79645653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_79646727_79647710_79647795_79649016_79649223_79649987_79650055_79658559
tx.4268	chr15	-	1464	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	8	0	8	0	multi-exon	FALSE	canonical	3	65	junction_3	38.6091526281874	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	251	False	NA	NA	False	NA	NA	NA	79658660	79645653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
tx.4269	chr15	-	3183	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	396	2227	-12	18	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	79718493	79710323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
tx.427	chr1	-	4417	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	-19	-3	-19	3	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	NA	False	NA	NA	NA	133589137	133547605	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
tx.4270	chr15	+	1972	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	219.175122618878	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTGCATGATTGGG	7482	False	NA	NA	False	NA	NA	NA	79775839	79792121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
tx.4271	chr15	+	2384	8	FSM	ENSMUSG00000009585.19	ENSMUST00000165537.8	2360	8	2	-26	-1	19	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTTGATTGAGGAACAAT	8253	False	NA	NA	False	NA	NA	NA	79776610	79792656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
tx.4272	chr15	+	1931	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	23	-1	15	1	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTTGTGCATGATTGG	8269	False	NA	NA	False	NA	NA	NA	79776626	79792120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
tx.4273	chr15	-	3185	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	-9	-2648	-8	6	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79855328	79800001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
tx.4275	chr15	-	2958	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-7	6	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	121.853737461488	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79855327	79800001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
tx.4276	chr15	-	1343	10	FSM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	16	-8	16	8	multi-exon	FALSE	canonical	3	16287	junction_9	4874.04926341766	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTTCTTTTTTTTTTT	3534	False	NA	NA	False	NA	NA	NA	79967591	79961983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
tx.4277	chr15	-	1472	10	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	214	junction_7	9920.80080773053	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	NA	False	NA	NA	NA	79967553	79961996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
tx.4278	chr15	+	807	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	12	0	2	0	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	91	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCCTGTGTGGATTA	NA	False	NA	NA	False	NA	NA	NA	79975546	79997642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
tx.4279	chr15	+	1412	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	313	0	-26	0	multi-exon	FALSE	canonical	3	1292	junction_2	43	794	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4458	False	NA	NA	False	NA	NA	NA	80139697	80141742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_80139887_80140407_80140723_80140834
tx.428	chr1	-	3015	6	ISM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	34179	-3	34179	3	3prime_fragment	FALSE	canonical	3	398	junction_3	35.0051424793558	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	NA	False	NA	NA	NA	133554939	133547605	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504
tx.4280	chr15	-	984	3	NIC	ENSMUSG00000051518.9	novel	838	4	NA	NA	-15	-4	intron_retention	FALSE	canonical	3	697	junction_2	77.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATTCAAGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80148500	80144819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_80145596_80148183_80148319_80148427
tx.4281	chr15	-	823	4	FSM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	11	4	11	-4	multi-exon	FALSE	canonical	3	697	junction_3	66.5181679443043	258	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATTCAAGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80148505	80144819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_80145332_80145497_80145596_80148183_80148319_80148427
tx.4282	chr15	+	1885	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	14	1812	0	15	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	252	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832704	80853335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
tx.4283	chr15	+	2758	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	24	215	10	186	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCATCTTTTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	80861989	80896276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
tx.4284	chr15	-	1711	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	11	2	-2	-2	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	160	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGAAAGTTGCTCTTGA	6859	False	NA	NA	False	NA	NA	NA	81245002	81203113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
tx.4285	chr15	-	1634	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	337	1375	-112	406	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	794	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	NA	False	NA	NA	NA	81283907	81249244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
tx.4286	chr15	+	511	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	56	1108	8	-125	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	1222	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	NA	False	NA	NA	NA	81350552	81359462	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
tx.4287	chr15	+	3450	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	34	3	-11	-3	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	NA	False	NA	NA	NA	81548123	81572513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
tx.4288	chr15	-	1088	4	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	3259	11	0	5	3prime_fragment	FALSE	canonical	3	19	junction_3	7.87400787401181	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACCAAAATACCTAGCA	8254	False	NA	NA	False	NA	NA	NA	81578229	81570376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_81570604_81576308_81576508_81577187_81577355_81577734
tx.4289	chr15	-	931	3	FSM	ENSMUSG00000063765.13	ENSMUST00000173898.2	1095	3	169	-5	-10	5	multi-exon	FALSE	canonical	3	12	junction_2	12.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACCAAAATACCTAGCA	8244	False	NA	NA	False	NA	NA	NA	81578239	81570376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_81570604_81576308_81576508_81577734
tx.429	chr1	-	2583	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	3	157	3	-157	multi-exon	FALSE	canonical	3	77	junction_1	0	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGAGAAGGTGGAATT	NA	False	NA	NA	False	NA	NA	NA	134006855	134003064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_134005442_134006649
tx.4290	chr15	-	2913	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	120	0	-3	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	81614084	81588453	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
tx.4291	chr15	-	1262	2	ISM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	87	19323	-15	-4786	5prime_fragment	FALSE	canonical	3	698	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTTCCTTGTGCAGCCT	NA	False	NA	NA	False	NA	NA	NA	81614117	81607776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_81608834_81613912
tx.4292	chr15	+	2353	18	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	1	2184	at_least_one_novel_splicesite	TRUE	canonical	3	50	junction_17	51.2595674249711	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATAGGGCATGATGGCA	1949	False	NA	NA	False	NA	NA	NA	81629258	81670841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81670820
tx.4294	chr15	-	863	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	3	797	3	152	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAACGTCTACTTTTAG	NA	False	NA	NA	False	NA	NA	NA	81756109	81749517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
tx.4295	chr15	+	2743	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	175	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	NA	False	NA	NA	NA	81756684	81799334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
tx.4297	chr15	-	1465	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	27	1050	27	322	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTTTTCATTAGCTG	455	False	NA	NA	False	NA	NA	NA	81810414	81800279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
tx.4298	chr15	-	1036	7	ISM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	3068	0	2902	0	3prime_fragment	FALSE	canonical	3	940	junction_3	87.4941267870148	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	1689	False	NA	NA	False	NA	NA	NA	81842063	81835308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993
tx.4299	chr15	-	1234	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	66	0	5	0	multi-exon	FALSE	canonical	3	940	junction_3	83.919543587405	169	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	81845065	81835308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
tx.43	chr1	+	1651	3	FSM	ENSMUSG00000025940.7	ENSMUST00000177501.2	1636	3	-5	-10	-5	10	multi-exon	FALSE	canonical	3	53	junction_1	240	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTTGGTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	16735425	16748429	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_16735730_16737888_16737998_16747191
tx.430	chr1	-	3027	7	ISM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	260	0	-29	0	3prime_fragment	FALSE	canonical	0	0	junction_2	219.093397131604	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289457	134273834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271
tx.4300	chr15	-	1487	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	-30	1477	-30	-153	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCTGTCTGAGAATTAG	NA	False	NA	NA	False	NA	NA	NA	81900394	81878200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
tx.4301	chr15	+	2088	13	FSM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	26	0	26	0	multi-exon	TRUE	canonical	3	579	junction_9	64.3868516598433	322	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	81900595	81924286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
tx.4302	chr15	-	1247	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	18	812	-1	141	multi-exon	FALSE	canonical	3	3045	junction_2	110	1270	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGCTGTGCCTGATT	4924	False	NA	NA	False	NA	NA	NA	81931781	81925537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_81926570_81928097_81928219_81931687
tx.4303	chr15	+	2045	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	1	0	1	0	multi-exon	FALSE	canonical	3	36	junction_2	6.64371047599825	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTCTTTGGCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	82012123	82026404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
tx.4304	chr15	+	1993	4	FSM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	2	-14	2	14	multi-exon	FALSE	canonical	3	662	junction_2	39.6176167324027	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAAGTGTGACTGTGC	2245	False	NA	NA	False	NA	NA	NA	82031453	82058109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953
tx.4305	chr15	+	2302	2	ISM	ENSMUSG00000022463.9	ENSMUST00000231065.2	2664	3	10	1821	5	537	5prime_fragment	FALSE	canonical	3	751	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGTTTTAGGGGGCTGGG	2248	False	NA	NA	False	NA	NA	NA	82031456	82056005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_82031692_82053938
tx.4306	chr15	-	489	2	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCATCACCTCCCTT	NA	False	NA	NA	False	NA	NA	NA	82102313	82099496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_82099935_82102262
tx.4307	chr15	-	990	5	FSM	ENSMUSG00000068101.12	ENSMUST00000230408.2	593	5	-13	-384	-13	3	multi-exon	FALSE	canonical	3	1067	junction_2	109.17045158833	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGTAGATGCAGAAAC	NA	False	NA	NA	False	NA	NA	NA	82128624	82118276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333
tx.4308	chr15	-	897	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	8	297	8	3	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGTAGATGCAGAAAC	NA	False	NA	NA	False	NA	NA	NA	82128941	82118276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
tx.4309	chr15	-	1738	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-10	-13	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	86.2554346113913	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTCTAATCAACCAGG	1334	False	NA	NA	False	NA	NA	NA	82223037	82213745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222438_82222516_82222952
tx.431	chr1	-	3274	9	NNC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	287.691648080023	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	134289682	134273834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280873_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
tx.4310	chr15	-	1910	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	-10	13	-10	-13	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTCTAATCAACCAGG	1334	False	NA	NA	False	NA	NA	NA	82223037	82213745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
tx.4311	chr15	-	1834	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	29	junction_8	84.7758072801433	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCAGGGTACTATGACC	1344	False	NA	NA	False	NA	NA	NA	82223027	82213734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222952
tx.4312	chr15	+	613	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	67	25	7	6	multi-exon	FALSE	canonical	3	1353	junction_2	125	429	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGTCCCCATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	82230221	82233266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_82230471_82232100_82232242_82233043
tx.4313	chr15	+	597	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	16	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	801.5	482	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGTCCCCATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	82230230	82233266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_82230471_82232100_82232242_82233050
tx.4314	chr15	-	507	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	69	14	1	7	multi-exon	FALSE	canonical	3	3916	junction_1	175	1352	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGAACCCCTTTCCTGT	6281	False	NA	NA	False	NA	NA	NA	82238454	82234354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_82234573_82235179_82235296_82238281
tx.4315	chr15	+	1339	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	33	-1	24	1	multi-exon	FALSE	canonical	3	56	junction_2	9.92534113742268	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCAAGTGGCTGTTGTCA	NA	False	NA	NA	False	NA	NA	NA	82984437	83000876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
tx.4316	chr15	-	1912	7	FSM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	38	2413	-12	2	multi-exon	FALSE	canonical	3	832	junction_3	73.7437379639037	305	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCTCCTGAGCTCT	NA	False	NA	NA	False	NA	NA	NA	83006964	83000046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
tx.4317	chr15	-	3245	9	FSM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	54	0	-1	0	multi-exon	FALSE	canonical	3	462	junction_6	74.2839779158332	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	NA	False	NA	NA	NA	83033531	83010176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
tx.4318	chr15	-	3151	8	FSM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	8	-2	6	0	multi-exon	FALSE	canonical	3	86	junction_6	194.457277192347	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	NA	False	NA	NA	NA	83033524	83010176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
tx.4319	chr15	-	2039	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	382	1	382	-1	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	259	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCAGCGTTTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	83056411	83037695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
tx.432	chr1	-	2038	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	-9	-340	3	340	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGTCTTGCAAGGTA	NA	False	NA	NA	False	NA	NA	NA	134289688	134275079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
tx.4320	chr15	-	2051	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	43	-2	0	2	multi-exon	FALSE	canonical	3	57	junction_2	20.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCTCATGGTCACATC	2266	False	NA	NA	False	NA	NA	NA	83135932	83110920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83112796_83114714_83114859_83135900
tx.4321	chr15	-	1555	2	ISM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	-34	2490	-34	-879	5prime_fragment	FALSE	canonical	3	57	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCATGGCCCAAGTATCCT	2189	False	NA	NA	False	NA	NA	NA	83136009	83113412	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_83114859_83135900
tx.4322	chr15	-	2600	16	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	10.2515039547051	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	3547	False	NA	NA	False	NA	NA	NA	83234426	83183939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
tx.4323	chr15	-	3146	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	20	527	-16	-12	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACAGTCCCTTTGCC	7127	False	NA	NA	False	NA	NA	NA	83348787	83260334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
tx.4324	chr15	-	2062	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	-2	0	-2	0	multi-exon	FALSE	canonical	3	63	junction_11	7.21110255092798	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTTTATCTTATTATT	NA	False	NA	NA	False	NA	NA	NA	83395096	83367969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
tx.4325	chr15	+	943	5	FSM	ENSMUSG00000016758.5	ENSMUST00000016902.5	942	5	0	-1	0	1	multi-exon	FALSE	canonical	3	12	junction_1	7.58287544405155	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTAGGTCGTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	83411062	83428836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_83411138_83425495_83425644_83427265_83427365_83427780_83427899_83428333
tx.4326	chr15	-	1274	2	ISM	ENSMUSG00000048755.10	ENSMUST00000229724.2	688	3	3642	-1030	3642	0	3prime_fragment	FALSE	canonical	3	226	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTCTCTCTCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	83433446	83430997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_83432144_83433318
tx.4327	chr15	+	840	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	-6	3	-6	-3	multi-exon	FALSE	canonical	3	179	junction_1	54.5119762580257	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGACTCTGTACTTAGT	NA	False	NA	NA	False	NA	NA	NA	83447786	83458401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
tx.4328	chr15	+	886	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	6064	-5	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	92.1013934024164	67	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACAGACTCTGTACTTA	NA	False	NA	NA	False	NA	NA	NA	83454139	83458399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_83454247_83455585_83455797_83456400_83456540_83457970
tx.4329	chr15	-	3051	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	0	723	0	-694	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGACTGGACATGGTTCT	4671	False	NA	NA	False	NA	NA	NA	83479358	83460013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
tx.433	chr1	-	1834	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	26	1289	0	296	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCTGGTACTGTTCTAA	NA	False	NA	NA	False	NA	NA	NA	134289691	134275123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
tx.4330	chr15	-	2398	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-31	-1048	-31	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	83989841	83960297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
tx.4331	chr15	+	1674	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	-8	2963	-8	-2963	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	2083	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	NA	False	NA	NA	NA	84076433	84098505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
tx.4332	chr15	+	1631	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	-7	2160	-7	-2160	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCACTCCTGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	84116236	84197729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
tx.4333	chr15	+	2915	13	FSM	ENSMUSG00000022439.10	ENSMUST00000023074.9	2619	13	-296	0	-296	0	multi-exon	TRUE	canonical	2	3	junction_2	5.54464205837992	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGACTTAATGACAGCC	NA	False	NA	NA	False	NA	NA	NA	84208624	84227143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_84209033_84211188_84211285_84212495_84212561_84213064_84213168_84214223_84214365_84215179_84215296_84216491_84216548_84216891_84216915_84218542_84218602_84218786_84218856_84221985_84222088_84225054_84225128_84225539
tx.4334	chr15	+	1567	8	NNC	ENSMUSG00000036106.16	novel	1719	9	NA	NA	-6414	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	49.7864828799045	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTGTCTGCCCCCTGG	8456	False	NA	NA	False	NA	NA	NA	84547406	84587872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_84547463_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
tx.4335	chr15	+	1680	9	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	-6405	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	42.0979141407267	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	8465	False	NA	NA	False	NA	NA	NA	84547415	84587874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_84547463_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
tx.4336	chr15	+	1838	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	-7	-1	-7	0	multi-exon	FALSE	canonical	3	134	junction_7	10.3844467687921	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	NA	False	NA	NA	False	NA	NA	NA	84565195	84587874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
tx.4337	chr15	+	1520	12	NIC	ENSMUSG00000078954.10	novel	1527	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	58.989143138924	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTTTTGTGCTTCTGA	NA	False	NA	NA	False	NA	NA	NA	84604252	84656409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_84604309_84617096_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
tx.4338	chr15	+	1882	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-20	2904	-20	52	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGATGGTTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	84807591	84824260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
tx.4339	chr15	+	983	4	ISM	ENSMUSG00000016619.11	ENSMUST00000230411.2	1900	9	11713	-58	11713	58	3prime_fragment	FALSE	canonical	3	488	junction_1	6.0184900284226	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTTAATGTTGATT	NA	False	NA	NA	False	NA	NA	NA	84819362	84824266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_84819725_84821687_84821770_84822558_84822678_84823846
tx.434	chr1	+	2206	9	FSM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	209	5	-5	-5	multi-exon	TRUE	canonical	3	35	junction_5	130.869925880624	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGAATCATTGTCGTC	8180	False	NA	NA	False	NA	NA	NA	134333727	134339469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230_134338331_134338644
tx.4340	chr15	+	2438	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	80	0	-18	0	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	84921369	84947031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
tx.4341	chr15	+	2629	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	65.1689163199833	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	84921371	84947031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
tx.4342	chr15	-	4062	25	FSM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-13	-2	-13	2	multi-exon	FALSE	canonical	3	89	junction_19	18.7071269098764	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTACTCTGGTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	85016178	84948887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
tx.4343	chr15	-	2151	3	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-16	-42075	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	66	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTTCTGTCATGCTT	NA	False	NA	NA	False	NA	NA	NA	85016181	84997171	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_84999088_85000039_85000123_85016029
tx.4344	chr15	-	563	4	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-18	62876	-18	-56669	5prime_fragment	FALSE	canonical	3	116	junction_3	11.8977121983832	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTACAAAAAGCTGAAG	NA	False	NA	NA	False	NA	NA	NA	85016183	85011765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_85011873_85011959_85012073_85013871_85014061_85016029
tx.4345	chr15	+	2233	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	40	0	40	0	multi-exon	TRUE	canonical	3	356	junction_14	63.5701845785187	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTACCTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	85090245	85136086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
tx.4346	chr15	+	942	5	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	33288	2	-24161	-2	3prime_fragment	FALSE	canonical	3	356	junction_4	44.6227240315963	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCTTGTACCTTGGT	NA	False	NA	NA	False	NA	NA	NA	85123493	85136084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
tx.4347	chr15	+	1889	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	48	0	48	0	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	704	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGACCCTTGATTGGA	NA	False	NA	NA	False	NA	NA	NA	85220493	85347413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
tx.4348	chr15	-	940	4	FSM	ENSMUSG00000064284.13	ENSMUST00000125947.8	706	4	41	-275	41	0	multi-exon	FALSE	canonical	3	301	junction_1	22.0151463012778	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8733	False	NA	NA	False	NA	NA	NA	85695250	85691172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102
tx.4349	chr15	-	1048	5	FSM	ENSMUSG00000064284.13	ENSMUST00000144067.8	761	5	-15	-272	0	0	multi-exon	FALSE	canonical	3	18	junction_4	131.723906334424	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8123	False	NA	NA	False	NA	NA	NA	85695860	85691172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695751
tx.435	chr1	+	1628	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	209	0	-5	0	multi-exon	FALSE	canonical	3	291	junction_1	53.3666562565053	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8180	False	NA	NA	False	NA	NA	NA	134333727	134339478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
tx.4350	chr15	-	986	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	11	0	11	0	multi-exon	FALSE	canonical	3	77	junction_4	106.509389257473	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8097	False	NA	NA	False	NA	NA	NA	85695886	85691172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
tx.4351	chr15	+	2694	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	-18	1073	-18	16	multi-exon	FALSE	canonical	2	10	junction_3	3.06729262113491	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	85716488	85741950	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
tx.4352	chr15	+	2702	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	-18	-43	-18	0	multi-exon	FALSE	canonical	3	528	junction_1	58.9672832668062	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7119	False	NA	NA	False	NA	NA	NA	85743927	85760774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
tx.4353	chr15	+	2779	11	FSM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	-87	0	-87	0	multi-exon	FALSE	canonical	3	556	junction_6	54.9377829913076	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7251	False	NA	NA	False	NA	NA	NA	85744059	85760774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
tx.4354	chr15	+	1532	11	FSM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	-4	-2	-4	0	multi-exon	FALSE	canonical	3	28	junction_4	10.36532681588	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGTCTGGGGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	85763516	85781595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
tx.4355	chr15	-	1008	7	ISM	ENSMUSG00000035891.17	ENSMUST00000156546.2	2162	8	862	1087	862	-1087	3prime_fragment	TRUE	canonical	3	21	junction_1	2.3392781412697	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTGTCAACAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	86035787	86025608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735
tx.4356	chr15	+	3269	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	-40	0	-40	0	multi-exon	FALSE	canonical	3	67	junction_12	8.71779788708135	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTTTTATTGCATT	NA	False	NA	NA	False	NA	NA	NA	86098619	86382704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
tx.4357	chr15	-	1934	5	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	38929	-1262	9022	0	3prime_fragment	FALSE	canonical	3	571	junction_1	40.9206549312202	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	88576045	88571236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951
tx.4358	chr15	+	528	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	42	4855	42	-4855	multi-exon	FALSE	canonical	3	163	junction_1	12	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATAAGCAGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	88635904	88663864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_88636006_88638962_88639137_88663611
tx.4359	chr15	-	2136	10	FSM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	-7	1	-7	0	multi-exon	FALSE	canonical	0	0	junction_5	14.1691718917785	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTCTTGTTGTTGGT	9237	False	NA	NA	False	NA	NA	NA	88703528	88689447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
tx.436	chr1	+	1843	8	NIC	ENSMUSG00000026456.19	novel	2420	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	337	junction_4	39.0227563122351	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCATTGTCGTCGTGTC	8220	False	NA	NA	False	NA	NA	NA	134333767	134339474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
tx.4360	chr15	-	1515	7	ISM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	-2	5619	-2	3745	5prime_fragment	FALSE	canonical	0	0	junction_2	14.8548533034381	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGGTGTCTCTTCCTGTG	9242	False	NA	NA	False	NA	NA	NA	88703523	88695065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
tx.4361	chr15	+	1368	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	902	junction_1	99.7619388566824	333	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	88703846	88710886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
tx.4362	chr15	+	1676	3	ISM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	1016	0	1016	0	3prime_fragment	FALSE	canonical	3	856	junction_1	44	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	NA	False	NA	NA	NA	88747404	88749929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_88747752_88748518_88748696_88748777
tx.4363	chr15	-	1195	2	NNC	ENSMUSG00000093394.2	novel	1234	2	NA	NA	324	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCCAATGTGTGACAGT	NA	False	NA	NA	False	NA	NA	NA	88775362	88773982	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_88775099_88775283
tx.4364	chr15	-	504	2	FSM	ENSMUSG00000093394.2	ENSMUST00000176618.2	1234	2	17	713	-16	15	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGGAGAGACCCTTCT	NA	False	NA	NA	False	NA	NA	NA	88775702	88774695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_88775099_88775601
tx.4365	chr15	+	2039	12	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-14	49206	-14	10871	5prime_fragment	TRUE	canonical	3	47	junction_4	7.60382678775509	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCGTAAGCCGTGTTTG	2893	False	NA	NA	False	NA	NA	NA	88867097	88890145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
tx.4366	chr15	+	2490	14	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-12	43250	-12	-11723	5prime_fragment	FALSE	canonical	3	36	junction_13	10.1817797586303	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTATTTCCAGAAGAAAT	2895	False	NA	NA	False	NA	NA	NA	88867099	88896101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565
tx.4367	chr15	+	2379	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	56	4	-3	2	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGCTTTGTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	88960271	88971276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
tx.4368	chr15	-	2388	3	ISM	ENSMUSG00000051786.16	ENSMUST00000041656.14	5357	25	-278	14710	-52	3319	5prime_fragment	FALSE	canonical	3	50	junction_1	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTAAAGACTCCCCTGG	NA	False	NA	NA	False	NA	NA	NA	89007367	88999322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_89000459_89004712_89004877_89006279
tx.4369	chr15	-	2368	20	FSM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	46	-2	-1	2	multi-exon	FALSE	canonical	3	17	junction_4	5.98567079345711	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTCTCCGTTACTG	NA	False	NA	NA	False	NA	NA	NA	89012857	89007507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008457_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
tx.437	chr1	+	2017	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	92	1014	-1	-1011	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTGGCATTCAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	134343207	134360075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
tx.4370	chr15	-	1912	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	-104	0	-22	0	multi-exon	FALSE	canonical	2	7	junction_5	1.87634249459548	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTGGCCCCAT	NA	False	NA	NA	False	NA	NA	NA	89024928	89014786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
tx.4371	chr15	-	2429	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	37	-5	37	4	multi-exon	FALSE	canonical	2	7	junction_8	5.74096487412616	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGATCCCATTGCTT	NA	False	NA	NA	False	NA	NA	NA	89033794	89026684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
tx.4372	chr15	-	2012	20	FSM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	-26	2599	-9	0	multi-exon	FALSE	canonical	3	25	junction_9	20.4859251730037	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	NA	False	NA	NA	NA	89080677	89069014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
tx.4375	chr15	+	1952	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	30	1241	13	22	multi-exon	TRUE	canonical	1	145	junction_1	244.22211859964	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCGGACAGACTATTTAA	NA	False	NA	NA	False	NA	NA	NA	89239951	89255788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
tx.4376	chr15	+	2020	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	-11	1246	-11	17	multi-exon	FALSE	canonical	0	0	junction_1	269.960005245468	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	NA	False	NA	NA	NA	89239954	89255783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
tx.4377	chr15	+	2039	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	16	1244	-11	19	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACCGGACAGACTATT	NA	False	NA	NA	False	NA	NA	NA	89239954	89255785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
tx.4378	chr15	-	1214	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	-63	-6	-35	6	multi-exon	FALSE	canonical	3	56	junction_2	1.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTCTGTACCAGCAG	NA	False	NA	NA	False	NA	NA	NA	89258084	89255833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89256669_89257625_89257806_89257885
tx.4379	chr15	-	1372	4	ISM	ENSMUSG00000022615.8	ENSMUST00000023285.5	2037	11	2892	-300	2892	300	3prime_fragment	FALSE	canonical	3	35	junction_3	10.6770782520313	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTCTGTACCAGCAG	NA	False	NA	NA	False	NA	NA	NA	89258350	89255833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_89256669_89257625_89257806_89257885_89258027_89258134
tx.438	chr1	+	2157	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	278	1011	170	-1011	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTGGCATTCAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	134343471	134360075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
tx.4380	chr15	-	446	3	FSM	ENSMUSG00000078938.10	ENSMUST00000109314.9	448	3	6	-4	6	4	multi-exon	FALSE	canonical	3	12	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGGACCCCTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	89294460	89274372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89274643_89281528_89281638_89294393
tx.4381	chr15	-	1312	10	ISM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	627	-13	158	6	3prime_fragment	FALSE	canonical	3	146	junction_8	78.7223594447169	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTGACATTCTGTTGA	1807	False	NA	NA	False	NA	NA	NA	89313475	89310556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251
tx.4382	chr15	-	1279	11	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	112.30422966211	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAAGTGACATTCTGTT	1653	False	NA	NA	False	NA	NA	NA	89313629	89310558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312782_89312916_89313031_89313251_89313361_89313579
tx.4383	chr15	-	1249	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	465	-7	-4	0	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	1645	False	NA	NA	False	NA	NA	NA	89313637	89310562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
tx.4384	chr15	-	1824	10	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	1211	False	NA	NA	False	NA	NA	NA	89314071	89310562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
tx.4385	chr15	-	1572	9	FSM	ENSMUSG00000022617.16	ENSMUST00000170334.8	2063	9	487	4	57	3	multi-exon	FALSE	canonical	3	290	junction_3	35.8355619462009	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATACAGACTTAAGTGAC	1706	False	NA	NA	False	NA	NA	NA	89313576	89310566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251
tx.4386	chr15	-	1410	10	FSM	ENSMUSG00000022617.16	ENSMUST00000171140.8	1416	10	9	-3	0	3	multi-exon	FALSE	canonical	3	259	junction_9	49.0736408087093	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATACAGACTTAAGTGAC	1649	False	NA	NA	False	NA	NA	NA	89313633	89310566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
tx.4387	chr15	-	2703	8	ISM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	1269	14	-43	-14	3prime_fragment	FALSE	canonical	3	62	junction_5	9.89743318610787	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTACAAAGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	89360359	89356692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
tx.4389	chr15	-	1608	9	FSM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	34	-2	1	2	multi-exon	FALSE	canonical	3	40	junction_3	5.95818764390649	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGGTCTCAGTTACCTT	23	True	NA	NA	False	NA	NA	NA	89476092	89466733	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89476022
tx.439	chr1	+	1545	5	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	9299	1011	9191	-1011	3prime_fragment	FALSE	canonical	3	879	junction_1	70.310027734314	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTGGCATTCAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	134352492	134360075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
tx.4390	chr15	+	2799	13	FSM	ENSMUSG00000078932.9	ENSMUST00000190436.7	2041	13	-35	-723	-35	723	multi-exon	FALSE	canonical	2	14	junction_9	6.39172642301489	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTGATAATTATTTT	NA	False	NA	NA	False	NA	NA	NA	91083661	91145820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91124845_91125023_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
tx.4392	chr15	-	1729	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-53	0	-53	0	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCATTTTGTTTACAA	NA	False	NA	NA	False	NA	NA	NA	93234742	93182158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
tx.4393	chr15	-	909	9	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	285.365965691426	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGAATAGTGACTGGT	NA	False	NA	NA	False	NA	NA	NA	93296189	93283986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93291587_93291646_93293467_93293497_93295050_93295137_93296043
tx.4394	chr15	-	850	8	FSM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	23	4	-10	0	multi-exon	FALSE	canonical	3	583	junction_1	44.8289265214016	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	False	NA	NA	False	NA	NA	NA	93296192	93283990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
tx.4395	chr15	-	751	7	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	235.838515844116	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	False	NA	NA	False	NA	NA	NA	93296205	93283990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93293467_93293497_93295050_93295137_93296043
tx.4396	chr15	+	1051	7	NIC	ENSMUSG00000036167.17	novel	1154	8	NA	NA	0	17	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATGTTTCCCCTATGT	NA	False	NA	NA	False	NA	NA	NA	93296230	93387206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
tx.4397	chr15	+	3743	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	12	-2601	12	399	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTCGTCTCCTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	93296242	93389790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
tx.4398	chr15	+	1366	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	12	17	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	46.1078897803836	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATGTTTCCCCTATGT	NA	False	NA	NA	False	NA	NA	NA	93296242	93387206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
tx.4399	chr15	+	1451	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	12	116	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	53.2326430464831	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTGTTTTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	93296242	93387411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
tx.44	chr1	+	1800	4	NNC	ENSMUSG00000025940.7	novel	1710	3	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	240.428783634572	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTATGTGTTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	16735426	16748422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_16735730_16735931_16736092_16737891_16737998_16747191
tx.440	chr1	+	3377	12	Fusion	ENSMUSG00000026455.15_ENSMUSG00000101061.2	novel	937	3	NA	NA	-8	-2	multi-exon	TRUE	canonical	3	12	junction_1	47.209573199224	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAAGAGAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	134363357	134418609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr1_+_134363609_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
tx.4400	chr15	-	2792	9	FSM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	45	3	-9	-3	multi-exon	FALSE	canonical	3	33	junction_8	4.64858849544676	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGAATTGTCTCTATGT	NA	False	NA	NA	False	NA	NA	NA	94441383	94420571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
tx.4401	chr15	+	1547	10	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	-14	5180	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	9.63788819653397	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	94441509	94460014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459797
tx.4402	chr15	-	2998	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	30	-3	30	3	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	94487730	94475828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
tx.4403	chr15	+	583	2	Antisense	novelGene_ENSMUSG00000097536.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGCAGCACTCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	96080419	96089528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr15_+_96080932_96089457
tx.4404	chr15	-	1735	5	FSM	ENSMUSG00000033228.9	ENSMUST00000228072.2	4519	5	-89	2873	-89	0	multi-exon	FALSE	canonical	0	0	junction_2	104.145331148352	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAATGGGATGTGCGT	NA	False	NA	NA	False	NA	NA	NA	96316662	96312452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952
tx.4405	chr15	+	1993	2	FSM	ENSMUSG00000116160.2	ENSMUST00000229356.2	632	2	-34	-1327	-34	1327	multi-exon	FALSE	canonical	3	8	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACTCCTTGCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	96395748	96398096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_96395869_96396223
tx.4406	chr15	-	2747	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	429	7	429	-7	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGAACAATGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	96539414	96473874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
tx.4407	chr15	-	2515	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-127	4578	22	-9	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCAGGAACAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	96540258	96473876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
tx.4408	chr15	-	2453	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	-3	4816	-3	-247	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCCTATTTTGGTTA	NA	False	NA	NA	False	NA	NA	NA	96540797	96474114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
tx.4409	chr15	-	2180	3	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	23	-6922	intron_retention	FALSE	canonical	3	252	junction_2	29.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTGGTTTTTTTAAT	NA	False	NA	-81	True	NA	NA	NA	96597588	96594467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_96596145_96596495_96596699_96597288
tx.441	chr1	+	3261	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	0	147	0	-2	multi-exon	FALSE	canonical	3	104	junction_1	24.9889231659096	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAAGAGAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	134383268	134418609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
tx.4410	chr15	-	3932	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	0	0	0	0	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	96953837	96892703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
tx.4411	chr15	-	1823	15	FSM	ENSMUSG00000022464.15	ENSMUST00000231039.2	3923	15	152	1948	152	0	multi-exon	FALSE	canonical	3	1416	junction_8	96.7698721879145	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCCGTGCAGTGCAGT	NA	False	NA	NA	False	NA	NA	NA	96917680	96894648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604
tx.4412	chr15	-	630	3	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATCTATCCCACTAGT	NA	False	NA	NA	False	NA	NA	NA	96983855	96967940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_96968444_96980507_96980562_96983782
tx.4413	chr15	-	1209	2	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	16	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTTCTAGAATTTGTC	1701	False	NA	NA	False	NA	NA	NA	97029512	97026296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_97027102_97029108
tx.4414	chr15	-	1059	3	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	16	junction_1	4	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTTCTAGAATTTGTC	1442	False	NA	NA	False	NA	NA	NA	97029771	97026296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr15_-_97027102_97029108_97029267_97029675
tx.4415	chr15	-	821	3	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-26	156	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	28	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTATTTAATTGCAAT	NA	False	NA	NA	False	NA	NA	NA	97065151	97058657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_97059277_97064383_97064492_97065057
tx.4416	chr15	-	827	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-17	-155	-17	155	multi-exon	FALSE	canonical	3	219	junction_1	244.5	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTATTTAATTGCAA	NA	False	NA	NA	False	NA	NA	NA	97065142	97058658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_97059277_97064383_97064508_97065057
tx.4417	chr15	-	958	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-20	155	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTATTTAATTGCAA	NA	False	NA	NA	False	NA	NA	NA	97065145	97058658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
tx.4418	chr15	-	938	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	-18	-410	-17	154	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTATTTAATTGCA	NA	False	NA	NA	False	NA	NA	NA	97065142	97058659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
tx.4419	chr15	-	2192	16	ISM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	2457	2	2457	-2	3prime_fragment	FALSE	canonical	3	254	junction_7	32.2446205677095	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGGTCGATATTTCAT	NA	False	NA	NA	False	NA	NA	NA	97601249	97572979	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082
tx.442	chr1	+	3292	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	-17	2	7	-2	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAAGAGAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	134383275	134418609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
tx.4420	chr15	-	2262	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	5	4	5	-4	multi-exon	FALSE	canonical	3	236	junction_16	35.978292066189	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAGGGTCGATATTTC	NA	False	NA	NA	False	NA	NA	NA	97603701	97572981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
tx.4421	chr15	+	2505	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	31	0	31	0	multi-exon	TRUE	canonical	3	145	junction_2	1	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTTTTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	97682266	97690573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_97682498_97687783_97687952_97688467
tx.4422	chr15	+	2327	3	NNC	ENSMUSG00000081534.4	novel	702	3	NA	NA	3617	-5	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	66.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAAGTTTGTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	97685986	97690568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_97686045_97687783_97687952_97688467
tx.4423	chr15	+	1450	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	8	-3	-2	2	multi-exon	FALSE	canonical	3	86	junction_1	28.3318527024094	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTGTCTCTGACTGCCT	7688	False	NA	NA	False	NA	NA	NA	97862117	97868158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
tx.4424	chr15	+	1602	8	FSM	ENSMUSG00000052369.9	ENSMUST00000064200.9	1623	8	21	0	-5	0	multi-exon	FALSE	canonical	3	51	junction_1	38.9117263685331	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7702	False	NA	NA	False	NA	NA	NA	97862131	97868156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_97862385_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
tx.4425	chr15	-	1031	3	ISM	ENSMUSG00000022483.18	ENSMUST00000088355.12	4862	53	27273	0	11537	0	3prime_fragment	FALSE	canonical	3	15	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGACTTGTGTTTTGT	9670	False	NA	NA	False	NA	NA	NA	97875265	97873482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_97874068_97874522_97874766_97875062
tx.4426	chr15	-	2469	2	FSM	ENSMUSG00000033075.18	ENSMUST00000182611.2	853	2	-393	-1223	25	589	multi-exon	FALSE	canonical	3	12	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTCTTGGTGTCTGTT	6432	False	NA	NA	False	NA	NA	NA	97991161	97985848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_97987685_97990528
tx.4427	chr15	-	2162	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	15	-1077	15	0	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	98043572	98032517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
tx.4428	chr15	-	2185	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	265	1146	245	4	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGATCGATTGTGTTCTC	NA	False	NA	NA	False	NA	NA	NA	98431880	98416684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
tx.4429	chr15	-	2077	9	ISM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	372	0	372	0	3prime_fragment	FALSE	canonical	1	217	junction_2	322.689382378782	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGATCGATTGTGT	NA	False	NA	NA	False	NA	NA	NA	98431753	98416688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398
tx.443	chr1	+	2547	8	ISM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	16849	-2	-2876	2	3prime_fragment	FALSE	canonical	3	138	junction_3	17.9977322834556	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAGAATTTGTGGGTA	NA	False	NA	NA	False	NA	NA	NA	134400141	134418613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
tx.4430	chr15	-	2034	10	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	387.907205398405	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGATCGATTGTGT	NA	False	NA	NA	False	NA	NA	NA	98432174	98416688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
tx.4431	chr15	-	2141	10	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	343.824388135198	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGATCGATTGTGT	NA	False	NA	NA	False	NA	NA	NA	98432179	98416688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
tx.4432	chr15	-	1093	6	NNC	ENSMUSG00000011960.13	novel	2015	3	NA	NA	-49	-2484	intron_retention	FALSE	canonical	3	14	junction_1	12.5123938556936	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTTTGAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	98465610	98449016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_98449521_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
tx.4433	chr15	-	1633	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	0	570	0	-570	multi-exon	FALSE	canonical	3	35	junction_3	4.54835134966506	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGGGTTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	98575342	98567655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
tx.4434	chr15	-	713	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	23	-2	-23	2	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGTATTTTTCACTCG	NA	False	NA	NA	False	NA	NA	NA	98626056	98622248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
tx.4435	chr15	-	2042	12	NIC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	100.554249163292	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9502	False	NA	NA	False	NA	NA	NA	98729249	98710677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98728767
tx.4436	chr15	-	1621	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	31	0	-2	0	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9380	False	NA	NA	False	NA	NA	NA	98729371	98710677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
tx.4437	chr15	-	1087	7	NIC	ENSMUSG00000023755.11	novel	1261	8	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	74.1117774416155	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	98779235	98775658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_98776179_98776333_98776416_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
tx.4438	chr15	-	1610	7	ISM	ENSMUSG00000023755.11	ENSMUST00000229352.2	1604	8	12552	0	-22	0	3prime_fragment	FALSE	canonical	3	176	junction_2	18.3212081115484	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	98779237	98775658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_98776179_98776333_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
tx.4439	chr15	-	1160	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	101	0	-45	0	multi-exon	FALSE	canonical	3	165	junction_2	21.3388598283861	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	98779260	98775658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
tx.444	chr1	+	1981	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	-9	889	-9	-889	multi-exon	FALSE	canonical	3	479	junction_1	0	236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCATCTGTTTTCTGG	6629	False	NA	NA	False	NA	NA	NA	134422376	134435623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_134422548_134433813
tx.4440	chr15	-	2170	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	134	0	-42	0	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTCCCTGTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	98815978	98801797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
tx.4441	chr15	-	2265	13	ISM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	12	2735	12	-434	5prime_fragment	FALSE	canonical	3	43	junction_5	11.8872013340212	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAATAAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98816100	98804532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
tx.4442	chr15	-	1612	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	129	2	2	-2	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	6216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTCTGGATACTTT	160	False	NA	NA	False	NA	NA	NA	98832317	98829307	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
tx.4443	chr15	-	1651	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	152	0	152	0	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	1560	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTGTGTTCTATATT	NA	False	NA	NA	False	NA	NA	NA	98851432	98847717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
tx.4444	chr15	+	1555	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	430	-3	0	3	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	1080	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATCTGGTTCATAGCT	NA	False	NA	NA	False	NA	NA	NA	98928201	98935994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
tx.4445	chr15	+	672	4	ISM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	2129	-1	1340	1	3prime_fragment	FALSE	canonical	3	19	junction_3	6.48074069840786	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTACTGTGTTGGTCTGA	1434	False	NA	NA	False	NA	NA	NA	98955190	98956855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_98955360_98955448_98955499_98955696_98955777_98956482
tx.4446	chr15	+	2261	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	0	-6	0	0	multi-exon	FALSE	canonical	3	68	junction_1	8.88852727732572	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCAGCCAGTGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	98972858	98981290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
tx.4447	chr15	+	1278	7	ISM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	3882	-6	-2724	0	3prime_fragment	FALSE	canonical	3	68	junction_3	9.8784276751583	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCAGCCAGTGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	98976740	98981290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
tx.4448	chr15	+	1520	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	18.5	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACGGAATCCTAGCCCA	3951	False	NA	NA	False	NA	NA	NA	98997220	99002618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_98997366_98998703_98999657_99002196
tx.4449	chr15	+	1548	3	FSM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	16	0	16	0	multi-exon	FALSE	canonical	3	51	junction_1	3.5	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACGGAATCCTAGCCCA	4039	False	NA	NA	False	NA	NA	NA	98997308	99002618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_98997482_98998703_98999657_99002196
tx.445	chr1	+	2380	9	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	57763	3335	-3946	428	3prime_fragment	FALSE	canonical	3	763	junction_3	83.4385065482359	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTGGTGCTTTAGC	4817	False	NA	NA	False	NA	NA	NA	134545671	134559688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
tx.4450	chr15	+	1376	2	ISM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	1410	0	1410	0	3prime_fragment	FALSE	canonical	3	58	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACGGAATCCTAGCCCA	5433	False	NA	NA	False	NA	NA	NA	98998702	99002618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_98999657_99002196
tx.4451	chr15	-	1792	14	FSM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	-12	-9	-2	0	multi-exon	FALSE	canonical	3	113	junction_13	210.299476515005	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTTATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	99149838	99140697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
tx.4452	chr15	-	1909	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	5	2	-1	-1	multi-exon	FALSE	canonical	3	647	junction_2	85.1129201923742	162	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTCTTTTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99149837	99140699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
tx.4453	chr15	+	2347	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	104	1	0	-1	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	281	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	99290866	99307929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
tx.4454	chr15	+	2420	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	37	-1513	37	-1	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	99291136	99307929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
tx.4455	chr15	-	1263	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	13	0	-9	0	multi-exon	FALSE	canonical	3	84	junction_1	0	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTCGTTTCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	99372598	99367959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_99368961_99372336
tx.4456	chr15	-	1196	3	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	27954	0	9115	0	3prime_fragment	FALSE	canonical	3	702	junction_1	12.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	6672	False	NA	NA	False	NA	NA	NA	99521570	99518376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_99519346_99520099_99520206_99521449
tx.4457	chr15	-	2901	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	33	-1	-11	0	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	138	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	99549504	99518376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
tx.4458	chr15	-	2517	15	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	11998	4	172	-3	3prime_fragment	FALSE	canonical	3	663	junction_6	25.5020007218321	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATGTTGGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	99537526	99518380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494
tx.4459	chr15	-	3030	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	22	0	-9	0	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	99549502	99518376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
tx.446	chr1	+	945	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_1	233.142779333943	76	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	NA	False	NA	NA	NA	134890296	134901900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_134890348_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
tx.4460	chr15	+	2345	3	ISM	ENSMUSG00000023019.13	ENSMUST00000023760.13	2861	8	4230	1	1749	-1	3prime_fragment	FALSE	canonical	2	2	junction_1	0.5	2	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGAAGAGTTGGGGG	NA	False	NA	NA	False	NA	NA	NA	99619625	99622885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_99620050_99620336_99620444_99621071
tx.4461	chr15	+	607	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	0	1483	0	479	multi-exon	FALSE	canonical	3	1440	junction_1	0	447	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTAGTGGTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	99623527	99625930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_99623730_99625525
tx.4462	chr15	-	1856	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	12	2	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGTCTCTTTAGTAAC	NA	False	NA	NA	False	NA	NA	NA	99670331	99633470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
tx.4463	chr15	-	1967	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	131	-2	-5	2	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGTCTCTTTAGTAAC	NA	False	NA	NA	False	NA	NA	NA	99670351	99633470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
tx.4464	chr15	-	4203	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	40	0	0	0	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7278	False	NA	NA	False	NA	NA	NA	99773297	99676350	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
tx.4465	chr15	-	708	2	FSM	ENSMUSG00000023022.15	ENSMUST00000171450.2	2680	2	-17	1989	-17	-1989	multi-exon	FALSE	canonical	3	1109	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACTTGTAAAGTAAAATG	7261	False	NA	NA	False	NA	NA	NA	99773314	99741097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_99741705_99773213
tx.4466	chr15	+	4467	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	0	337	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTTGATAAGGATTAGAA	NA	False	NA	NA	False	NA	NA	NA	99870716	99912229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
tx.4467	chr15	+	6474	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	56	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	99870716	99914239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
tx.4468	chr15	+	1358	10	ISM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	63	18753	6	5111	5prime_fragment	FALSE	canonical	3	323	junction_1	104.011751472824	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACAGTTGCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	99870723	99895486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253
tx.4469	chr15	+	2341	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	24	0	24	0	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTTCGGAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	100125723	100159125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
tx.447	chr1	+	1090	7	FSM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	26	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	158.492902049272	275	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	NA	False	NA	NA	NA	134890328	134901900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
tx.4470	chr15	+	1901	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	39	6	11	-6	multi-exon	FALSE	canonical	3	19	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCTGCTTGGCTGCATT	577	False	NA	NA	False	NA	NA	NA	100202680	100212230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_100203226_100210874
tx.4471	chr15	-	2878	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	22	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	53.8380244062904	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	NA	NA	NA	100320914	100285778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_100286319_100286443_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
tx.4472	chr15	-	2149	17	FSM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	20	856	20	-856	multi-exon	FALSE	canonical	1	67	junction_1	39.2515923243886	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGTGAGTTAGGTCTT	NA	False	NA	NA	False	NA	NA	NA	100320916	100286634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
tx.4473	chr15	-	2043	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-24	2396	-24	-2396	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTTAGGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	100320907	100292839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
tx.4474	chr15	+	2325	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	-14	-1089	-14	0	multi-exon	FALSE	canonical	3	74	junction_1	16.3587705833904	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2405	False	NA	NA	False	NA	NA	NA	100366973	100377045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
tx.4475	chr15	+	2430	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	72	0	-12	0	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2407	False	NA	NA	False	NA	NA	NA	100366975	100377045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
tx.4476	chr15	+	1851	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	279	5	279	-5	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	498	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGCCAGCATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	100513508	100518637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
tx.4477	chr15	-	914	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	111	-105	26	-5	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTTTTCCTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	100534710	100519224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
tx.4478	chr15	-	903	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	223	9	59	-9	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTAAATTTTTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	100534513	100519228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
tx.4479	chr15	-	2032	11	FSM	ENSMUSG00000098112.9	ENSMUST00000183211.8	2036	11	-2	6	-2	0	multi-exon	TRUE	canonical	2	83	junction_1	21.2593508837876	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGTGTCTTGCCCTGAA	NA	False	NA	NA	False	NA	NA	NA	100567436	100538963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
tx.448	chr1	+	895	6	ISM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	5161	0	-3553	0	3prime_fragment	FALSE	canonical	3	687	junction_5	56.6568618968612	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	NA	False	NA	NA	NA	134895463	134901900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
tx.4480	chr15	-	747	4	FSM	ENSMUSG00000023031.9	ENSMUST00000229235.2	456	4	-89	-202	-89	0	multi-exon	FALSE	canonical	3	11	junction_3	10.8730042868667	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGCTTGCATTTATAA	5865	False	NA	NA	False	NA	NA	NA	100581089	100572302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580934
tx.4481	chr15	-	1083	6	ISM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	2558	3	1	1	3prime_fragment	FALSE	canonical	2	9	junction_4	10.6695829346793	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGCTTGCATTTAT	8443	False	NA	NA	False	NA	NA	NA	100583244	100572304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014
tx.4482	chr15	-	3847	12	FSM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	-47	-1054	-47	3	multi-exon	FALSE	canonical	3	77	junction_7	8.71021059418435	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	1627	False	NA	NA	False	NA	NA	NA	100618405	100589690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
tx.4483	chr15	+	2436	7	NNC	ENSMUSG00000023034.8	novel	893	2	NA	NA	1159	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	68.8486665730636	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	101165885	101172676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_101165971_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
tx.4484	chr15	+	1460	5	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	4890	4	-1125	-4	3prime_fragment	FALSE	canonical	3	170	junction_1	16.7984374273323	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGAGTCTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	101169616	101172672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
tx.4485	chr15	+	1241	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	29	0	29	0	multi-exon	FALSE	canonical	3	465	junction_2	16.5	638	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTGGCCTGTGTCCT	8059	False	NA	NA	False	NA	NA	NA	101182181	101188826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_101182427_101184813_101185132_101188148
tx.4486	chr15	+	898	2	FSM	ENSMUSG00000037204.8	ENSMUST00000230525.2	605	2	298	-591	298	0	multi-exon	FALSE	canonical	3	465	junction_1	0	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTGGCCTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	101184911	101188826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_101185132_101188148
tx.4487	chr15	+	1613	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	-28	2509	-28	15	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTAGGAGTGGTACTCAC	NA	False	NA	NA	False	NA	NA	NA	101310254	101325685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
tx.4488	chr15	+	1038	8	NNC	ENSMUSG00000023039.18	novel	3563	8	NA	NA	2678	10	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	10.6885404971485	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCTAGCTAGGAGTGGTA	NA	False	NA	NA	False	NA	NA	NA	101313007	101325680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_101313056_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
tx.4489	chr15	-	1804	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	146	8	146	-8	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCTATGTATGCATTC	6038	False	NA	NA	False	NA	NA	NA	101912771	101905140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
tx.449	chr1	-	876	6	ISM	ENSMUSG00000097993.8	ENSMUST00000183317.8	6108	37	22379	-1	249	0	3prime_fragment	FALSE	canonical	3	8	junction_5	3.5213633723318	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGTCTGCTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	135037953	135036234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037676_135037822
tx.4490	chr15	+	1406	7	FSM	ENSMUSG00000023043.8	ENSMUST00000023803.8	1437	7	26	5	26	-5	multi-exon	FALSE	canonical	3	28	junction_3	6.13731754650732	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCACTTTGTGTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	101936640	101940457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_101937110_101937900_101937984_101938257_101938415_101939053_101939219_101939329_101939456_101939730_101939955_101940275
tx.4491	chr15	+	3702	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	150	2	59	-2	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	477	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	-35	True	NA	NA	NA	101982357	102005606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
tx.4492	chr15	+	2942	9	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	14910	0	2659	0	3prime_fragment	FALSE	canonical	3	809	junction_2	43.485450152896	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	101997117	102005608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
tx.4493	chr15	+	2506	7	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	16282	2	4031	-2	3prime_fragment	FALSE	canonical	3	820	junction_6	39.4985935051982	315	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	101998489	102005606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
tx.4494	chr15	+	2470	6	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	17622	0	-3169	0	3prime_fragment	FALSE	canonical	3	820	junction_5	40.897921707588	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	340	False	NA	NA	False	NA	NA	NA	101999829	102005608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
tx.4495	chr15	-	2445	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	11	0	11	0	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGGAAGGGGAATCCTT	NA	False	NA	NA	False	NA	NA	NA	102044658	102024962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
tx.4496	chr15	+	2145	14	ISM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	461	-5	-129	5	3prime_fragment	FALSE	canonical	3	11	junction_9	3.75113395084203	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTCTCTTTTAATTC	NA	False	NA	NA	False	NA	NA	NA	102059421	102071909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
tx.4497	chr15	+	1089	5	ISM	ENSMUSG00000023045.14	ENSMUST00000160465.2	1628	13	9442	-342	9442	5	3prime_fragment	FALSE	canonical	3	18	junction_1	2.48746859276655	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTCTCTTTTAATTC	NA	False	NA	NA	False	NA	NA	NA	102068992	102071909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
tx.4498	chr15	-	986	4	ISM	ENSMUSG00000023044.3	ENSMUST00000023805.3	2279	15	10044	-2	5	2	3prime_fragment	FALSE	canonical	3	98	junction_2	11.1455023315337	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTATGTTTTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	102087449	102085431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395
tx.4499	chr15	-	2241	13	ISM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	7330	-1	7294	1	3prime_fragment	FALSE	canonical	3	39	junction_10	5.29150262212918	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCCTCTACTTTACTT	3178	False	NA	NA	False	NA	NA	NA	102133049	102124428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992
tx.45	chr1	-	1958	11	ISM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	7284	4	-7088	1	3prime_fragment	FALSE	canonical	3	2274	junction_6	181.743665639273	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTCTGTGTGTATG	NA	False	NA	NA	False	NA	NA	NA	20883252	20873195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184
tx.450	chr1	+	1515	7	FSM	ENSMUSG00000026426.11	ENSMUST00000125774.2	1495	7	-20	0	-20	0	multi-exon	FALSE	canonical	1	1	junction_1	183.490235889179	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	NA	False	NA	NA	NA	135075386	135084007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_135075466_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
tx.4500	chr15	+	1734	2	NNC	ENSMUSG00000097050.2	novel	2192	2	NA	NA	419	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTGGTAAGGTTGGTT	2097	False	NA	NA	False	NA	NA	NA	102179416	102182563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_102179766_102181178
tx.4501	chr15	+	1700	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	50	4	50	-4	multi-exon	FALSE	canonical	3	355	junction_1	0	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGTCCTCTCCTGTA	NA	False	NA	NA	False	NA	NA	NA	102187938	102190185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_102188065_102188611
tx.4502	chr15	+	383	2	ISM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	27509	0	1087	0	3prime_fragment	FALSE	canonical	3	407	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	7494	False	NA	NA	False	NA	NA	NA	102232209	102232792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_102232243_102232442
tx.4503	chr15	+	631	6	FSM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	48	383	-4	4	multi-exon	FALSE	canonical	3	835	junction_1	29.5932424718887	468	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	382	False	NA	NA	False	NA	NA	NA	102234598	102239925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
tx.4504	chr15	+	1193	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	3	284	3	4	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCCCTGATCCACCAA	5930	False	NA	NA	False	NA	NA	NA	102240146	102246290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
tx.4505	chr15	-	1752	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	59	0	-5	0	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	280	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGTAACTCCGAGTG	NA	False	NA	NA	False	NA	NA	NA	102259135	102246686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
tx.4506	chr15	+	934	4	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6972	-10	16	7	3prime_fragment	FALSE	canonical	3	123	junction_2	13.3666251038423	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTGTTTTTACTTCTT	NA	False	NA	NA	False	NA	NA	NA	102360773	102363075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_102360995_102361179_102361328_102361466_102361604_102362647
tx.4507	chr15	+	1061	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	12	-18	12	-6	multi-exon	FALSE	canonical	3	427	junction_1	130.244215056008	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTGGGCTAGTTTTG	2417	False	NA	NA	False	NA	NA	NA	102367648	102371235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
tx.4508	chr15	+	1044	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	0	-24	0	-6	multi-exon	FALSE	canonical	3	623	junction_2	60	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTGGGCTAGTTTTG	3286	False	NA	NA	False	NA	NA	NA	102368517	102371235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_102368582_102368804_102369155_102370605
tx.4509	chr15	+	1565	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-42	0	-10	0	multi-exon	TRUE	canonical	3	312	junction_3	28.7706447616316	237	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	102426851	102432111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
tx.451	chr1	-	1925	9	FSM	ENSMUSG00000003051.14	ENSMUST00000185752.2	1901	9	-20	-4	-20	0	multi-exon	FALSE	canonical	3	367	junction_7	94.095363860288	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGAGCTCTCTGTGTAC	NA	False	NA	NA	False	NA	NA	NA	135186196	135181312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
tx.4510	chr15	+	1498	9	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	96.5083383703191	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	102427160	102432111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
tx.4511	chr15	-	2576	4	NIC	ENSMUSG00000062683.12	novel	731	5	NA	NA	80	0	intron_retention	FALSE	canonical	3	3206	junction_3	741.096634874442	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3981	False	NA	NA	False	NA	NA	NA	102579482	102571298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_102573683_102574197_102574291_102576145_102576215_102579452
tx.4512	chr15	-	776	6	NNC	ENSMUSG00000062683.12	novel	731	5	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2311.60970754148	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3972	False	NA	NA	False	NA	NA	NA	102579491	102571298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102577989_102578106_102579452
tx.4513	chr15	-	683	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	48	0	48	0	multi-exon	FALSE	canonical	3	3206	junction_4	667.870870752723	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3949	False	NA	NA	False	NA	NA	NA	102579514	102571298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
tx.4514	chr15	-	2749	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	75	0	28	0	multi-exon	FALSE	canonical	3	88	junction_14	14.2851785613836	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTCATGACGTATGTT	NA	False	NA	NA	False	NA	NA	NA	102630538	102615211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
tx.4515	chr15	-	1443	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAAAAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	102840080	102834710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr15_-_102835785_102839711
tx.4516	chr15	-	666	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTTTGTGGGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102840092	102837212	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr15_-_102837498_102839711
tx.4517	chr15	+	1434	2	NNC	ENSMUSG00000022484.8	novel	1909	2	NA	NA	-34961	5	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGGGTTTTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	102840269	102880333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr15_+_102840603_102879232
tx.4518	chr15	+	1754	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	229	0	229	0	multi-exon	FALSE	canonical	3	38	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAATGTCTGATGGTTTC	6201	False	NA	NA	False	NA	NA	NA	102943049	102945278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_102943588_102944062
tx.4519	chr15	-	510	3	ISM	ENSMUSG00000036061.11	ENSMUST00000229371.2	3882	7	3761	4250	-4	-1480	internal_fragment	FALSE	canonical	3	65	junction_2	7.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTATAGGGGTGAGG	NA	False	NA	NA	False	NA	NA	NA	103071758	103065966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_-_103066346_103066583_103066655_103071698
tx.452	chr1	-	1982	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	110	3	-20	1	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTGAGCTCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	135186196	135181315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
tx.4520	chr15	-	2159	5	FSM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	34	1468	-13	1100	multi-exon	FALSE	canonical	3	24	junction_4	189.635176061827	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGCGTTTGATT	NA	False	NA	NA	False	NA	NA	NA	103123745	103106581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123694
tx.4521	chr15	-	2305	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-36	1077	combination_of_known_splicesites	FALSE	canonical	3	31	junction_5	201.842512865848	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCGTCAGCTACTGAGC	NA	False	NA	NA	False	NA	NA	NA	103148279	103106604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103148159
tx.4522	chr15	-	2207	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-38	6634	-38	1077	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCGTCAGCTACTGAGC	NA	False	NA	NA	False	NA	NA	NA	103148281	103106604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
tx.4523	chr15	-	2223	6	FSM	ENSMUSG00000009575.15	ENSMUST00000122182.2	1146	6	-5	-1072	-5	1072	multi-exon	FALSE	canonical	3	10	junction_5	207.473757376686	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGACTTCGTCAGCTAC	NA	False	NA	NA	False	NA	NA	NA	103123737	103106609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103123694
tx.4524	chr15	+	990	4	ISM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	2203	-2	2163	2	3prime_fragment	FALSE	canonical	3	9291	junction_1	1808.10514689335	322	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	NA	False	NA	NA	NA	103151083	103153384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr15_+_103151146_103152051_103152208_103152385_103152456_103152682
tx.4525	chr15	-	1683	3	FSM	ENSMUSG00000058794.13	ENSMUST00000075192.13	1697	3	9	5	9	0	multi-exon	FALSE	canonical	0	0	junction_2	8	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTCTATTGTGTCTTC	4180	False	NA	NA	False	NA	NA	NA	103163857	103156643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_103157876_103159355_103159526_103163576
tx.4526	chr15	+	1691	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	-18	3	-9	0	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	511	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	103181318	103208292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
tx.4527	chr15	-	2316	8	FSM	ENSMUSG00000000552.11	ENSMUST00000168828.3	2298	8	-17	-1	-17	1	multi-exon	FALSE	canonical	3	18	junction_6	68.2405708519799	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACTCAGACTGTCTT	6902	False	NA	NA	False	NA	NA	NA	103248537	103222320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103241491_103241629_103248473
tx.4528	chr15	-	781	10	FSM	ENSMUSG00000022487.15	ENSMUST00000141364.8	700	10	-25	-56	5	0	multi-exon	FALSE	canonical	3	29	junction_9	37.8499310957182	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAAGTACTTTTTTTTT	8428	False	NA	NA	False	NA	NA	NA	103338831	103310884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603_103338685_103338782
tx.4529	chr15	-	715	9	FSM	ENSMUSG00000022487.15	ENSMUST00000023129.15	819	9	51	53	-10	0	multi-exon	FALSE	canonical	3	70	junction_8	17.7019596372831	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAAGTACTTTTTTTTT	8413	False	NA	NA	False	NA	NA	NA	103338846	103310884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338782
tx.453	chr1	-	2266	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	25	-3	25	3	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAGTTATAGAATGACT	NA	False	NA	NA	False	NA	NA	NA	135211797	135190446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
tx.4530	chr15	-	723	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	22	561	13	-146	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGCTTTTCTTCTTTC	2074	False	NA	NA	False	NA	NA	NA	103446408	103439266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
tx.4532	chr16	+	3237	6	FSM	ENSMUSG00000022529.12	ENSMUST00000023176.5	3241	6	7	-3	7	0	multi-exon	FALSE	canonical	3	89	junction_1	57.158026557956	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATATGTATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	3561963	3568648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
tx.4533	chr16	+	2365	7	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.8141758178173	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	NA	False	NA	NA	NA	3702531	3722634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718744_3719648_3719990_3721329
tx.4534	chr16	+	1617	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	162	0	-52	0	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGCTGCTATTATTAT	3256	False	NA	NA	False	NA	NA	NA	3726850	3759011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
tx.4535	chr16	-	2301	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	14	5	14	-5	multi-exon	TRUE	canonical	3	963	junction_15	112.803285922348	275	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGCAGACGTTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	3895677	3857839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
tx.4537	chr16	-	2185	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	60	2	60	-2	multi-exon	TRUE	canonical	3	103	junction_5	11.6010057035299	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTAGTTATTGAGGA	NA	False	NA	NA	False	NA	NA	NA	4377658	4362526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
tx.4538	chr16	-	566	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	29	1	-23	-1	multi-exon	FALSE	canonical	3	1132	junction_4	70.3491293478462	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCCTGTTTGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	4442823	4434328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
tx.4539	chr16	+	2611	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	37	0	-7	0	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	4501970	4525559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
tx.454	chr1	-	917	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	30	6333	30	270	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	592	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCTTTGAAAGTTAGA	NA	False	NA	NA	False	NA	NA	NA	135241486	135229283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
tx.4540	chr16	+	2490	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	15	0	-3	0	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	4501974	4525559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
tx.4541	chr16	-	431	2	ISM	ENSMUSG00000063445.15	ENSMUST00000079130.14	1459	6	5586	-13	5318	13	3prime_fragment	FALSE	canonical	3	199	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGGCCTCTGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	4531634	4529167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_4529468_4531503
tx.4542	chr16	-	1192	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	-10	1258	-7	0	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTCCCAAAAGAAAAGG	4833	False	NA	NA	False	NA	NA	NA	4536983	4529180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
tx.4543	chr16	+	1211	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	26	493	26	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	144	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	NA	False	NA	NA	NA	4544252	4584113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
tx.4544	chr16	-	2522	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	52	1379	-3	1	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	NA	False	NA	NA	NA	4607802	4584703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
tx.4545	chr16	-	2521	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	34	-1	8	1	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	NA	False	NA	NA	NA	4608122	4584703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
tx.4546	chr16	-	1384	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	463	4	-47	-4	multi-exon	FALSE	canonical	3	334	junction_1	8.5	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCTGTAGTCTTGCC	122	False	NA	NA	False	NA	NA	NA	4697716	4692645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4693734_4694225_4694286_4697480
tx.4547	chr16	+	3095	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	1	-1	1	0	multi-exon	TRUE	canonical	3	266	junction_15	54.4223810169636	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2925	False	NA	NA	False	NA	NA	NA	4704113	4756160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
tx.4548	chr16	+	3145	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	-2	-5	1	5	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTTGTTCTGGCA	2925	False	NA	NA	False	NA	NA	NA	4704113	4756165	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
tx.4549	chr16	+	1270	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	350	-2	-1	2	multi-exon	FALSE	canonical	3	527	junction_2	18	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTCTGAGTGCCATG	94	False	NA	NA	False	NA	NA	NA	4756974	4758885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4757158_4757241_4757503_4758059
tx.455	chr1	-	858	5	ISM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	3907	6338	-32	265	3prime_fragment	FALSE	canonical	3	2684	junction_1	61.2632638699572	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACCTTTCCTTTGAAAG	NA	False	NA	NA	False	NA	NA	NA	135237609	135229288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508
tx.4550	chr16	+	1818	2	FSM	ENSMUSG00000022516.11	ENSMUST00000230224.2	660	2	-13	-1145	3	0	multi-exon	FALSE	canonical	3	563	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGTTGCTTCTGAGTG	98	False	NA	NA	False	NA	NA	NA	4756978	4758880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4757158_4757241
tx.4552	chr16	-	2418	17	FSM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	-16	-4	3	4	multi-exon	TRUE	canonical	3	59	junction_1	12.8608842522589	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8207	False	NA	NA	False	NA	NA	NA	4782053	4759295	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
tx.4553	chr16	+	370	4	NIC	ENSMUSG00000096215.9	novel	382	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	19.6694913225759	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGTCTGGACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	4825151	4826173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_4825190_4825607_4825753_4825835_4825919_4826069
tx.4554	chr16	+	431	4	FSM	ENSMUSG00000096215.9	ENSMUST00000185147.8	399	4	-32	0	4	0	multi-exon	FALSE	canonical	3	31	junction_1	9.41629792788369	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGTCTGGACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	4825183	4826173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4825283_4825607_4825753_4825835_4825919_4826069
tx.4555	chr16	+	286	3	FSM	ENSMUSG00000096215.9	ENSMUST00000183477.8	247	3	-39	0	4	0	multi-exon	FALSE	canonical	3	10	junction_1	21.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGTCTGGACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	4825183	4826173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4825283_4825835_4825919_4826069
tx.4556	chr16	+	450	4	FSM	ENSMUSG00000096215.9	ENSMUST00000178155.9	429	4	-21	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	13.8804418757713	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGTCTGGACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	4825179	4826173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_4825283_4825607_4825753_4825835_4825934_4826069
tx.4557	chr16	-	1382	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	-27	0	-8	0	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	4831408	4826593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
tx.4558	chr16	-	3287	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	0	-7	0	7	multi-exon	FALSE	canonical	3	303	junction_6	221.604291976086	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8110	False	NA	NA	False	NA	NA	NA	4867727	4831765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
tx.4559	chr16	-	3310	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-11	-7	-5	7	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8105	False	NA	NA	False	NA	NA	NA	4867732	4831765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
tx.456	chr1	-	1094	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	273	396	113	-393	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAATCACTGGCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	135302702	135299190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
tx.4560	chr16	-	2075	4	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	30502	-7	30502	7	3prime_fragment	FALSE	canonical	3	1061	junction_2	69.0812725868757	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	NA	False	NA	NA	False	NA	NA	NA	4837219	4831765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150
tx.4561	chr16	+	1758	13	FSM	ENSMUSG00000039427.15	ENSMUST00000100196.9	1755	13	3	-6	3	-3	multi-exon	TRUE	canonical	3	181	junction_11	10.4029910228848	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTTTGCTCTGAGCCT	1283	False	NA	NA	False	NA	NA	NA	5051487	5062773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
tx.4562	chr16	-	1421	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	23	726	-4	1	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTGTCCTGTCAGACA	NA	False	NA	NA	False	NA	NA	NA	5073824	5062741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
tx.4563	chr16	-	2132	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.156061384151	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	NA	False	NA	NA	NA	5073835	5062017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_5063250_5065340_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
tx.4564	chr16	-	987	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTTCTCTTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	5073820	5065238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
tx.4565	chr16	+	1357	11	FSM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	-13	481	-13	7	multi-exon	FALSE	canonical	3	136	junction_3	20.7113495455994	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCTTGAGATGCTGTCA	NA	False	NA	NA	False	NA	NA	NA	8288638	8308067	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
tx.4566	chr16	+	1322	10	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-17	9	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	49.6680337868021	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGAGATGCTGTCATT	NA	False	NA	NA	False	NA	NA	NA	8288634	8308069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_8288730_8291694_8291831_8295830_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
tx.4567	chr16	-	2719	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	174	498	174	-498	multi-exon	FALSE	canonical	3	58	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGCTTGTTTTTGTCCC	NA	False	NA	NA	False	NA	NA	NA	8455402	8451590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_8454257_8455349
tx.4568	chr16	+	1787	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	60	-5	-4	5	multi-exon	FALSE	canonical	3	143	junction_5	22.2528088114737	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCCGAATCATACATG	NA	False	NA	NA	False	NA	NA	NA	8455597	8475400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
tx.4569	chr16	+	827	7	ISM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	48	5859	-1	245	5prime_fragment	FALSE	canonical	3	143	junction_5	24.6153745993569	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTTTATGATTCTGCT	NA	False	NA	NA	False	NA	NA	NA	8455585	8469536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273
tx.457	chr1	-	2202	5	ISM	ENSMUSG00000041879.14	ENSMUST00000161032.8	4226	25	42981	-791	82	791	3prime_fragment	TRUE	canonical	3	585	junction_4	29.4310635213884	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCTAATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	135315215	135311419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111
tx.4570	chr16	-	2853	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	0	5	0	-5	multi-exon	TRUE	canonical	3	300	junction_3	44.5146667465405	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGGTGACTGTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	8490019	8476448	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
tx.4571	chr16	-	1271	3	ISM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	7731	1546	7731	-1546	3prime_fragment	FALSE	canonical	3	357	junction_2	26	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAACAAGGGCTGGGGA	NA	False	NA	NA	False	NA	NA	NA	8482288	8477989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_8478968_8481450_8481574_8482118
tx.4572	chr16	-	2001	9	ISM	ENSMUSG00000022710.18	ENSMUST00000162445.9	3447	32	27201	-1180	3126	0	3prime_fragment	FALSE	canonical	2	677	junction_5	114.595416029613	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	NA	NA	NA	8512319	8507463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276
tx.4573	chr16	-	3040	18	ISM	ENSMUSG00000022710.18	ENSMUST00000162445.9	3447	32	22390	-1180	-436	0	3prime_fragment	FALSE	canonical	2	677	junction_5	90.2457237626218	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	NA	NA	NA	8517130	8507463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006
tx.4574	chr16	-	4791	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-51	5	-51	0	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	NA	NA	NA	8610223	8507463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
tx.4575	chr16	-	663	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8906	-42762	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	15	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTGAGTATCACTTTT	NA	False	NA	NA	False	NA	NA	NA	8601266	8566585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_8566919_8574679_8574937_8601193
tx.4576	chr16	+	1690	3	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	53037	930	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	3.5	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCCTCTCCCTAGTCTT	6146	False	NA	NA	False	NA	NA	NA	8951045	8956238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_8951217_8953545_8953645_8954818
tx.4577	chr16	+	509	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	15	281	15	0	multi-exon	FALSE	canonical	3	487	junction_1	5	148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTGTGTTACAACTT	NA	False	NA	NA	False	NA	NA	NA	9988106	9992494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_9988189_9988278_9988356_9992144
tx.4578	chr16	+	2560	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	221	-3	7	3	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACTGTCTTTTATGA	NA	False	NA	NA	False	NA	NA	NA	10010796	10060918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
tx.4579	chr16	-	3419	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	17	4	17	-4	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATAATTGTATGGTGT	NA	False	NA	NA	False	NA	NA	NA	10131815	10099616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
tx.458	chr1	+	1748	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	72	3	72	-3	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	509	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTCTGCTTTCCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	135656956	135679967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
tx.4582	chr16	-	1607	7	FSM	ENSMUSG00000039179.14	ENSMUST00000043415.13	1803	7	192	4	150	-4	multi-exon	FALSE	canonical	2	3	junction_5	2.40947204913349	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTCTTTAGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	10213162	10175815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_10176300_10179121_10179277_10196760_10196984_10200653_10200798_10203926_10203998_10205018_10205103_10212716
tx.4583	chr16	+	1236	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-12	897	-12	185	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTAGGGCCTGCTTCCT	NA	False	NA	NA	False	NA	NA	NA	10229799	10241395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
tx.4584	chr16	+	2617	6	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	8324	-901	-964	901	3prime_fragment	FALSE	canonical	3	753	junction_3	63.741979887669	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGCTCTTGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	10238135	10243193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
tx.4585	chr16	+	789	3	FSM	ENSMUSG00000068663.15	ENSMUST00000130148.2	704	3	25	-110	4	110	multi-exon	FALSE	canonical	3	59	junction_1	9	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATGGGTGTTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	10363265	10381419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_10363507_10377884_10378014_10381000
tx.4587	chr16	-	2007	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	12	216	12	-216	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCCTTGTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	10810973	10777354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
tx.4588	chr16	-	414	3	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	14	-7275	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTCAAGGAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	10810971	10791469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_10791638_10793290_10793475_10810909
tx.459	chr1	+	1411	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	22	2	22	-2	multi-exon	FALSE	canonical	3	639	junction_1	0	178	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTCTACTGAGTGAAAT	6767	False	NA	NA	False	NA	NA	NA	135693878	135696872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_135694633_135696215
tx.4590	chr16	-	3760	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	57	8	5	-8	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	10994200	10954463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
tx.4591	chr16	-	1915	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	30	0	30	0	multi-exon	FALSE	canonical	0	0	junction_8	907.175424049836	738	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	984	False	NA	NA	False	NA	NA	NA	11021165	11010833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
tx.4592	chr16	+	461	2	FSM	ENSMUSG00000097537.3	ENSMUST00000181526.3	2942	2	17	2464	17	-283	multi-exon	FALSE	canonical	1	6	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATCTTCAATGCTCTA	9716	False	NA	NA	False	NA	NA	NA	11021246	11041196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_11021612_11041100
tx.4593	chr16	-	1537	9	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	21535	338	-4157	11	3prime_fragment	FALSE	canonical	3	1334	junction_7	161.26874891001	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATTGCTTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	11050538	11038253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395
tx.4594	chr16	-	2695	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	1	-33	0	33	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGTGCTGTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	11727286	11621551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
tx.4595	chr16	+	1497	7	ISM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	13	29883	-12	-29883	5prime_fragment	FALSE	canonical	3	39	junction_6	10.2374584519575	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTTGAGAGGAGGGTCT	NA	False	NA	NA	False	NA	NA	NA	13074357	13203044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057
tx.4597	chr16	-	1142	2	ISM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	126917	0	126729	0	3prime_fragment	FALSE	canonical	3	377	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	13359117	13355823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_13356767_13358918
tx.4598	chr16	-	1261	3	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	117867	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	188.5	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	13367979	13355823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_13356767_13358918_13359113_13367855
tx.4599	chr16	-	2891	24	FSM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	15	0	-6	0	multi-exon	FALSE	canonical	1	121	junction_21	52.0035988284976	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	13486019	13355823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
tx.46	chr1	-	2994	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	33	4	-19	1	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTCTGTGTGTATG	NA	False	NA	NA	False	NA	NA	NA	20890503	20873195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
tx.460	chr1	+	1073	7	NIC	ENSMUSG00000026418.17	novel	1038	9	NA	NA	-2591	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.6862925215263	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAGGTTTCCAATGGTT	980	False	NA	NA	False	NA	NA	NA	135730203	135738714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
tx.4600	chr16	+	2968	9	NNC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	40.5383691704538	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACCTTTATAGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	13489823	13521471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13508121_13508194_13510296_13510442_13515196_13515371_13516736_13516940_13519928
tx.4601	chr16	+	2900	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	100	3	8	-3	multi-exon	FALSE	canonical	3	82	junction_1	10.7760126660835	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCTTTATAGAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	13489821	13521473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
tx.4602	chr16	+	1609	7	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	101	4282	9	41	5prime_fragment	FALSE	canonical	3	82	junction_1	11.6105794668292	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCCTCAGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	13489822	13517194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736
tx.4603	chr16	+	1658	2	FSM	ENSMUSG00000079737.5	ENSMUST00000225585.2	1705	2	47	0	-44	0	multi-exon	FALSE	canonical	3	37	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTACTTTGGTATCTTAA	NA	False	NA	NA	False	NA	NA	NA	13489839	13496252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13489943_13494697
tx.4604	chr16	+	1769	4	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	56	13795	-36	1845	5prime_fragment	TRUE	canonical	3	82	junction_1	10.3708994574027	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGTAACATT	NA	False	NA	NA	False	NA	NA	NA	13489777	13507681	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619
tx.4605	chr16	-	953	4	FSM	ENSMUSG00000022683.14	ENSMUST00000023364.7	1423	4	472	-2	-68	0	multi-exon	FALSE	canonical	3	37	junction_3	8.17856276425687	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	NA	False	NA	NA	False	NA	NA	NA	13548375	13532920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_13533461_13542972_13543080_13545826_13545978_13548220
tx.4606	chr16	-	971	4	NIC	ENSMUSG00000022683.14	novel	1423	4	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	22.69116323349	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	NA	False	NA	NA	False	NA	NA	NA	13548568	13532920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_13533461_13542972_13543080_13545826_13545978_13548395
tx.4607	chr16	+	3584	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	0	-2	0	2	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGAATTTTAGC	NA	False	NA	NA	False	NA	NA	NA	13598576	13632705	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
tx.4608	chr16	+	1061	9	NIC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	218.732963622313	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	13637173	13653314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
tx.4609	chr16	+	1114	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	60	1	5	-1	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	13637174	13653314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
tx.461	chr1	+	1099	5	ISM	ENSMUSG00000026418.17	ENSMUST00000148201.8	1150	9	5446	7	222	-7	3prime_fragment	FALSE	canonical	3	46	junction_1	20.1912728672563	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCCAATGGTTTCTGTA	3793	False	NA	NA	False	NA	NA	NA	135733016	135738720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
tx.4610	chr16	+	1011	9	FSM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	5	-2	5	-1	multi-exon	FALSE	canonical	3	118	junction_1	197.353743313878	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	13637174	13653314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
tx.4611	chr16	-	1214	11	ISM	ENSMUSG00000022680.15	ENSMUST00000115802.2	2466	14	40	9485	-36	803	5prime_fragment	FALSE	canonical	3	195	junction_3	12.7342059037853	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTGCCTTTCTTAAA	9734	False	NA	NA	False	NA	NA	NA	13720955	13676625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
tx.4612	chr16	+	2259	4	FSM	ENSMUSG00000022679.14	ENSMUST00000143697.8	580	4	-25	-1654	12	-49	multi-exon	FALSE	canonical	3	17	junction_2	74.5311269798659	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTGTATTTTCACTTG	503	False	NA	NA	False	NA	NA	NA	13758540	13766397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615
tx.4613	chr16	+	2256	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	28	803	-2	-7	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGGCAGGATTTGGGT	519	False	NA	NA	False	NA	NA	NA	13758556	13766439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
tx.4614	chr16	+	2321	5	FSM	ENSMUSG00000022679.14	ENSMUST00000148966.2	2315	5	0	-6	0	6	multi-exon	FALSE	canonical	3	36	junction_1	78.6431815226215	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGTATTGTCATTTTTA	521	False	NA	NA	False	NA	NA	NA	13758558	13766452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615
tx.4615	chr16	+	2155	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	27	212	-26	-212	multi-exon	TRUE	canonical	3	47	junction_1	4.9152822909778	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTGCTTAGTACTCC	NA	False	NA	NA	False	NA	NA	NA	13804494	13919152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
tx.4616	chr16	+	2395	9	FSM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	-50	-10	-3	0	multi-exon	FALSE	canonical	3	25	junction_8	91.5818452260054	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	NA	False	NA	NA	NA	13981158	14010792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
tx.4617	chr16	+	2267	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	20	0	-3	0	multi-exon	FALSE	canonical	3	240	junction_8	30.8696857774743	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	NA	False	NA	NA	NA	13981158	14010792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
tx.4618	chr16	-	1449	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	16	0	-12	0	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	NA	False	NA	NA	NA	14135223	14117107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
tx.4619	chr16	-	1168	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	-17	-4	14	0	multi-exon	FALSE	canonical	3	67	junction_2	185.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	NA	False	NA	NA	NA	14135225	14117107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_14118074_14122317_14122452_14135157
tx.462	chr1	+	780	4	ISM	ENSMUSG00000026418.17	ENSMUST00000148201.8	1150	9	7660	2	2436	-2	3prime_fragment	FALSE	canonical	3	71	junction_1	12.2565175405668	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGGTTTCTGTAGCCCT	6007	False	NA	NA	False	NA	NA	NA	135735230	135738725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_135735349_135736370_135736548_135737363_135737474_135738350
tx.4621	chr16	-	1187	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	23	2997	6	-169	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	288	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGCTATTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	15412365	15373537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
tx.4622	chr16	-	1062	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	5	169	5	-169	multi-exon	FALSE	canonical	3	117	junction_1	698.5	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGCTATTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	15412366	15373537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_15374408_15398922_15399072_15412323
tx.4623	chr16	-	3330	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	53	206	53	7	multi-exon	TRUE	canonical	3	1276	junction_6	130.715909088714	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGTTTAAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	15455211	15441966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
tx.4624	chr16	-	642	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	391	2	-234	0	multi-exon	FALSE	canonical	3	566	junction_1	21	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	15680820	15666306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_15666594_15680261_15680408_15680611
tx.4625	chr16	-	1004	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	29	2	-8	0	multi-exon	FALSE	canonical	3	566	junction_1	21	27	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	15681182	15666306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_15666594_15680261_15680408_15680611
tx.4626	chr16	-	3252	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	30	0	-17	0	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1977	False	NA	NA	False	NA	NA	NA	15964685	15707087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
tx.4627	chr16	+	1094	5	FSM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	468	12	-107	-4	multi-exon	FALSE	canonical	3	300	junction_2	32.9952648117878	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTCTTTACACAAGA	9987	False	NA	NA	False	NA	NA	NA	16121309	16127492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
tx.4628	chr16	-	2601	9	ISM	ENSMUSG00000022789.16	ENSMUST00000230022.2	2635	18	34859	-1155	-6240	2	3prime_fragment	FALSE	canonical	3	332	junction_5	328.034296987373	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGATGTGCTTCAA	5253	False	NA	NA	False	NA	NA	NA	16141550	16130091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485
tx.4629	chr16	-	3999	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	16176845	16130100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
tx.463	chr1	+	2305	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	314	374	314	261	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGTAATGTCGATGG	5932	False	NA	NA	False	NA	NA	NA	135746649	135760706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
tx.4630	chr16	-	2972	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-40	56	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCTAGTCCTATTAGT	NA	False	NA	NA	False	NA	NA	NA	16176863	16131190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
tx.4631	chr16	-	4077	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-28	3	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGTAAGTGAATTCTT	NA	False	NA	NA	False	NA	NA	NA	16176851	16130106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
tx.4632	chr16	-	3944	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	-6	13	-6	3	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGTAAGTGAATTCTT	NA	False	NA	NA	False	NA	NA	NA	16176829	16130106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
tx.4633	chr16	-	352	2	ISM	ENSMUSG00000022789.16	ENSMUST00000230038.2	1074	6	-31	9529	-23	-9529	5prime_fragment	FALSE	canonical	3	1358	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAGAAGAAAATGGTAAA	NA	False	NA	NA	False	NA	NA	NA	16176846	16163876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_16164010_16176627
tx.4634	chr16	-	754	2	FSM	ENSMUSG00000059305.13	ENSMUST00000232670.2	415	2	-20	-319	-20	2	multi-exon	FALSE	canonical	3	7	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTGGCTGGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	16688727	16686264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_16686843_16688551
tx.4635	chr16	+	2942	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	108.44980917969	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGCCTGGGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	16688632	16710850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
tx.4636	chr16	+	2862	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	5	1	combination_of_known_junctions	TRUE	canonical	3	287	junction_1	39.4304608859032	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGCCTGGGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	16688625	16710850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
tx.4637	chr16	+	2941	19	FSM	ENSMUSG00000022779.17	ENSMUST00000232581.2	2950	19	10	-1	0	1	multi-exon	FALSE	canonical	3	71	junction_1	102.489023802552	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGCCTGGGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	16688630	16710850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
tx.4638	chr16	+	2674	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	248	2177	63	527	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGATAAGATTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	16801493	16863140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
tx.4639	chr16	+	2442	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	536	344	3	51	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGCTGGCTTCAGGGTA	NA	False	NA	NA	False	NA	NA	NA	16888095	16904256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
tx.464	chr1	+	1960	8	ISM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	8668	374	-2729	261	3prime_fragment	FALSE	canonical	3	102	junction_1	11.9249352884053	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGTAATGTCGATGG	3813	False	NA	NA	False	NA	NA	NA	135755003	135760706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
tx.4640	chr16	-	1793	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	1	1294	1	-4	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTCATCTGGTGCCGTG	NA	False	NA	NA	False	NA	NA	NA	16929105	16906473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
tx.4641	chr16	-	1154	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	3	-1	3	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	149	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	16943001	16931261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
tx.4642	chr16	-	1075	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	33	0	33	0	multi-exon	FALSE	canonical	2	125	junction_1	37.5	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGCATGAGATGTG	NA	False	NA	NA	False	NA	NA	NA	16950214	16948001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_16948653_16949460_16949658_16949987
tx.4643	chr16	+	1633	3	FSM	ENSMUSG00000041774.17	ENSMUST00000232344.2	1580	3	-53	0	-8	0	multi-exon	TRUE	canonical	3	101	junction_2	5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	NA	False	NA	NA	NA	16964786	16966710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_16965011_16965096_16965257_16965461
tx.4644	chr16	+	1490	4	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-14	2	-11	-2	intron_retention	FALSE	canonical	3	70	junction_3	17.4547032821147	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGCTGGTTTATAAAG	NA	False	NA	NA	False	NA	NA	NA	16964828	16966708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660
tx.4645	chr16	+	1298	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-3	2	0	-2	multi-exon	FALSE	canonical	3	70	junction_3	15.4171171105366	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGCTGGTTTATAAAG	NA	False	NA	NA	False	NA	NA	NA	16964839	16966708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
tx.4646	chr16	-	1635	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	5	969	5	-666	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	1262	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAAATGAACTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	17019351	16970847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
tx.4647	chr16	+	1408	10	NNC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_8	80.0083328993508	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094145	17096525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17095835
tx.4648	chr16	+	1411	10	FSM	ENSMUSG00000055692.22	ENSMUST00000164950.11	1631	10	220	0	-12	0	multi-exon	FALSE	canonical	3	122	junction_4	58.6725586266908	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094160	17096525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
tx.4649	chr16	+	1565	9	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	132	junction_3	51.3997811279387	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094160	17096525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
tx.465	chr1	+	1444	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	48	314	-47	248	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCAGATCTCAAGGGA	NA	False	NA	NA	False	NA	NA	NA	135945752	135962766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
tx.4650	chr16	+	1639	8	FSM	ENSMUSG00000055692.22	ENSMUST00000232092.2	1627	8	-12	0	-12	0	multi-exon	FALSE	canonical	3	181	junction_2	39.2189042297154	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094160	17096525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
tx.4651	chr16	+	1638	8	NNC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-29	0	intron_retention	TRUE	canonical	3	43	junction_6	79.2678229491768	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094143	17096525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17095835
tx.4652	chr16	+	1715	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	186	junction_5	33.1331488928468	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094163	17096525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
tx.4653	chr16	+	1124	6	FSM	ENSMUSG00000055692.22	ENSMUST00000231322.2	1503	6	379	0	-25	0	multi-exon	FALSE	canonical	3	186	junction_4	34.92506263416	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	17094919	17096525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
tx.4654	chr16	+	1918	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	34	1495	34	-1495	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTGACTATCTTAAAATC	1418	False	NA	NA	False	NA	NA	NA	17223883	17247196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
tx.4655	chr16	+	3111	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	283	0	-2	0	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCGAGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	17326834	17344197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
tx.4656	chr16	-	1038	4	FSM	ENSMUSG00000022760.18	ENSMUST00000231424.2	895	4	30	-173	-9	0	multi-exon	FALSE	canonical	3	18	junction_3	43.6882898116494	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7561	False	NA	NA	False	NA	NA	NA	17348625	17345941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348547
tx.4657	chr16	-	1239	4	FSM	ENSMUSG00000022760.18	ENSMUST00000231288.2	734	4	-1	-504	-1	0	multi-exon	FALSE	canonical	3	86	junction_3	13.0724477007517	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7266	False	NA	NA	False	NA	NA	NA	17348920	17345941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641
tx.4658	chr16	-	1060	3	NIC	ENSMUSG00000022760.18	novel	1110	5	NA	NA	5	0	intron_retention	FALSE	canonical	3	9	junction_2	46	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7289	False	NA	NA	False	NA	NA	NA	17348897	17345941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_17346605_17346798_17346940_17348641
tx.4659	chr16	-	1154	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	-2	96	-2	0	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7184	False	NA	NA	False	NA	NA	NA	17349002	17345941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
tx.466	chr1	+	1399	5	ISM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	536	314	441	248	3prime_fragment	FALSE	canonical	3	407	junction_3	14.0066948278314	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCAGATCTCAAGGGA	NA	False	NA	NA	False	NA	NA	NA	135946240	135962766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
tx.4660	chr16	-	457	3	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGACTGGCCTTCACAAA	NA	False	NA	NA	False	NA	NA	NA	17436170	17424561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr16_-_17424860_17435247_17435361_17436124
tx.4661	chr16	+	3201	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	3	1328	0	152	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	NA	False	NA	NA	NA	17437223	17461363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
tx.4662	chr16	+	3113	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	-22	175	-22	-175	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGAGGATATTTATTT	NA	False	NA	NA	False	NA	NA	NA	17577504	17596895	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
tx.4663	chr16	+	2586	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	113.988912716203	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	17577504	17611246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
tx.4664	chr16	+	2595	7	FSM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	-33	-18	-19	0	multi-exon	FALSE	canonical	0	0	junction_1	179.822520527572	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	17577507	17611246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
tx.4665	chr16	-	4020	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	25	0	-8	0	multi-exon	TRUE	non_canonical	0	0	junction_7	135.772503989233	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	17709532	17658218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
tx.4666	chr16	-	4026	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-23	0	10	0	multi-exon	FALSE	canonical	3	236	junction_7	73.3575717518876	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	17709547	17658218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
tx.4667	chr16	-	1419	7	FSM	ENSMUSG00000003166.21	ENSMUST00000155611.8	1468	7	-22	71	-11	-71	multi-exon	FALSE	non_canonical	0	0	junction_4	165.862392763801	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACTGTTTACAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	17709535	17667245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
tx.4668	chr16	-	1448	7	ISM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-48	9026	-15	-70	5prime_fragment	FALSE	canonical	3	236	junction_4	83.6932228770977	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGTTTACAGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	17709572	17667244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
tx.4669	chr16	-	1750	10	FSM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	-20	1055	13	1054	multi-exon	FALSE	canonical	3	90	junction_7	33.1126025018337	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGCTGCTGATCCATG	NA	False	NA	NA	False	NA	NA	NA	17729199	17719627	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
tx.467	chr1	+	2140	8	FSM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	24	2	24	-2	multi-exon	FALSE	canonical	3	59	junction_1	8.75750407085377	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTATTTATTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	136343032	136367894	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136362243_136362373_136367490
tx.4670	chr16	-	1754	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	11	1056	11	1053	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGGCTGCTGATCCAT	NA	False	NA	NA	False	NA	NA	NA	17729201	17719628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
tx.4671	chr16	-	1139	6	FSM	ENSMUSG00000003528.16	ENSMUST00000129270.8	816	6	136	-459	136	0	multi-exon	FALSE	canonical	3	1746	junction_4	78.4973884915925	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	17745071	17743086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017
tx.4672	chr16	-	1583	8	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	416	0	84	0	3prime_fragment	FALSE	canonical	3	1746	junction_4	80.7002516244212	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	17745667	17743086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408
tx.4673	chr16	-	1633	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	33	0	23	0	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	17746050	17743086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
tx.4674	chr16	+	1044	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	24	18	-16	2	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	399	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGTGCTACCTAGGA	NA	False	NA	NA	False	NA	NA	NA	17884290	17889209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
tx.4675	chr16	-	2430	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	-44	0	-44	0	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTCTCTTGGTACCT	7899	False	NA	NA	False	NA	NA	NA	17907200	17889588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
tx.4676	chr16	-	1008	2	FSM	ENSMUSG00000003526.13	ENSMUST00000132241.2	687	2	-317	-4	-47	1	multi-exon	FALSE	canonical	3	130	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTTCAATTTGCAAG	7896	False	NA	NA	False	NA	NA	NA	17907203	17902063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_17902620_17906751
tx.4677	chr16	-	1055	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	28	2	28	-2	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	4630	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCTGACAAGGCTATG	7161	False	NA	NA	False	NA	NA	NA	18066568	18057649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
tx.4678	chr16	+	2335	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	32	0	32	0	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	76	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	301	False	NA	NA	False	NA	NA	NA	18066778	18071366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
tx.4679	chr16	+	2285	12	NNC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.6614186759067	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	356	False	NA	NA	False	NA	NA	NA	18066833	18071366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_18067121_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
tx.4680	chr16	-	1900	3	ISM	ENSMUSG00000116925.2	ENSMUST00000232144.2	608	5	0	8733	0	-8733	5prime_fragment	FALSE	canonical	3	194	junction_2	22	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	18076185	18071811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_18073470_18074535_18074650_18076057
tx.4681	chr16	-	1916	4	ISM	ENSMUSG00000022718.13	ENSMUST00000152033.2	1246	6	5705	-993	-2434	0	3prime_fragment	FALSE	canonical	3	194	junction_2	18.9795211273157	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	18077428	18071811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412
tx.4682	chr16	-	1668	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	24	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	76.5371641753207	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGGCTTTTTCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	18165923	18118685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18165734
tx.4683	chr16	-	1586	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_8	63.9256159532311	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	18161771	18118688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161661
tx.4684	chr16	-	1591	10	NNC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	99.7663938074006	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	18161778	18118688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161506_18161602_18161758
tx.4685	chr16	-	1496	9	FSM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	128	-2	0	0	multi-exon	FALSE	canonical	3	71	junction_8	57.8273291792038	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	18161778	18118688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
tx.4686	chr16	-	1330	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	83	-16	83	16	multi-exon	TRUE	canonical	3	117	junction_5	48.2825020064205	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACTGGTGAGATGGCTC	3971	False	NA	NA	False	NA	NA	NA	18245271	18226277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
tx.4687	chr16	-	1293	5	FSM	ENSMUSG00000000326.14	ENSMUST00000115609.10	1866	5	311	262	63	16	multi-exon	FALSE	canonical	3	108	junction_4	51.7656981021216	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACTGGTGAGATGGCTC	3951	False	NA	NA	False	NA	NA	NA	18245291	18226277	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
tx.4688	chr16	+	1894	17	NNC	ENSMUSG00000075704.18	novel	1878	18	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.2846975913857	29	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCTGCGTGTGCTGTC	NA	False	NA	NA	False	NA	NA	NA	18245179	18297820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
tx.4689	chr16	+	563	4	FSM	ENSMUSG00000075704.18	ENSMUST00000131303.8	532	4	-31	0	-7	0	multi-exon	FALSE	canonical	3	135	junction_1	7.03957069398096	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCCCTGACTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	18245180	18256562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251
tx.469	chr1	-	3061	9	NNC	ENSMUSG00000026398.15	novel	4733	9	NA	NA	808	14	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	15.8646619882051	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGAGGGCAGAGATAGC	NA	False	NA	NA	False	NA	NA	NA	136880560	136771999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136880319
tx.4690	chr16	+	1414	10	NNC	ENSMUSG00000075704.18	novel	1785	17	NA	NA	-7	167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	42.1675084091069	10	3	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGATTTTTGTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	18245180	18275385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773
tx.4691	chr16	+	1452	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	37	-4	-34	2	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	NA	False	NA	NA	NA	18317499	18383294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
tx.4692	chr16	+	1422	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	-8	2135	2	2	multi-exon	FALSE	canonical	3	212	junction_1	38.76564858485	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	NA	False	NA	NA	NA	18317629	18383294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
tx.4693	chr16	+	1266	7	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	97.958182688102	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	NA	False	NA	NA	NA	18317644	18383294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_18317702_18317795_18317891_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
tx.4694	chr16	+	1351	7	ISM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	332	-4	105	2	3prime_fragment	FALSE	canonical	3	265	junction_4	25.8419340521478	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	NA	False	NA	NA	NA	18317794	18383294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
tx.4695	chr16	-	1313	14	ISM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	6215	-1	6180	1	3prime_fragment	FALSE	canonical	3	368	junction_7	60.0377593217693	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCTGGGTCTGTGATC	5955	False	NA	NA	False	NA	NA	NA	18624161	18599201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131
tx.4696	chr16	-	1901	19	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	331	5	-15	1	3prime_fragment	TRUE	canonical	3	368	junction_7	53.1151788307469	353	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCTGGGTCTGTGATC	NA	False	NA	NA	False	NA	NA	NA	18630391	18599201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
tx.4697	chr16	+	1085	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	11	900	4	-43	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTACTGGCTCTGACA	NA	False	NA	NA	False	NA	NA	NA	18631054	18653111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
tx.4698	chr16	+	1059	12	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	8	-39	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	122.971810248132	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGGCTCTGACAAGTT	NA	False	NA	NA	False	NA	NA	NA	18631058	18653115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
tx.4699	chr16	+	956	11	ISM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	2646	806	2584	51	3prime_fragment	FALSE	canonical	3	393	junction_9	28.5418990258182	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGAACTTGGAGGTTG	NA	False	NA	NA	False	NA	NA	NA	18633689	18653205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
tx.47	chr1	+	2233	11	FSM	ENSMUSG00000041809.6	ENSMUST00000038447.6	2146	11	-87	0	-25	0	multi-exon	FALSE	canonical	3	9	junction_5	4.06939798987516	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCCTTATTTGGAG	NA	False	NA	NA	False	NA	NA	NA	21021824	21061065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
tx.470	chr1	-	2931	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	26	-1201	26	14	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGAGGGCAGAGATAGC	NA	False	NA	NA	False	NA	NA	NA	136881342	136771999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
tx.4700	chr16	+	1279	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	2	0	-1	0	multi-exon	FALSE	canonical	3	86	junction_1	45.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	18655329	18658910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_18655370_18655455_18655624_18657839
tx.4701	chr16	+	1248	4	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	72.2695571377664	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	18655329	18658910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_18655370_18655455_18655624_18657839_18658618_18658648
tx.4702	chr16	+	1334	3	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	88.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	18655329	18658910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_18655624_18657839_18658618_18658648
tx.4703	chr16	+	1364	2	FSM	ENSMUSG00000071632.11	ENSMUST00000190776.2	930	2	-74	-360	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	18655330	18658910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_18655624_18657839
tx.4704	chr16	-	982	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	299	-1	-24	1	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	729	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCGTTTATTTTAATCA	NA	False	NA	NA	False	NA	NA	NA	18695313	18690766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
tx.4705	chr16	+	818	2	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGGAATCTGCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	18854584	18859460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr16_+_18854906_18858963
tx.4706	chr16	+	4145	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	113	0	-52	0	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGTAATGTGAATTTAA	NA	False	NA	NA	False	NA	NA	NA	19579096	19591213	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
tx.4707	chr16	+	2144	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	41	5987	-2	-5987	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAATATTTCAAGCAGTC	NA	False	NA	NA	False	NA	NA	NA	19916332	19941984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
tx.4708	chr16	-	1329	10	FSM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	19	0	-7	0	multi-exon	FALSE	canonical	3	1528	junction_6	107.954723019524	942	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	NA	False	NA	NA	NA	20121118	20098569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
tx.4709	chr16	-	2185	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	64139	0	1751	0	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	NA	False	NA	NA	NA	20181005	20150052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
tx.471	chr1	-	4286	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	10	962	10	0	multi-exon	TRUE	canonical	3	136	junction_1	7.19739321808962	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGATGATCATCGTCT	NA	False	NA	NA	False	NA	NA	NA	138547477	138411574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
tx.4710	chr16	-	1284	8	ISM	ENSMUSG00000022822.17	ENSMUST00000115547.9	5372	31	-19	67529	0	-18	5prime_fragment	FALSE	canonical	3	160	junction_3	84.1085304708101	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTTCTCAGTGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	20245104	20217584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
tx.4711	chr16	-	1097	7	NNC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	90.516419627724	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	NA	False	NA	NA	NA	20245102	20219510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_20219785_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
tx.4712	chr16	+	2430	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	124	0	124	0	multi-exon	TRUE	canonical	3	2657	junction_7	154.998007155648	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	20317690	20328073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
tx.4713	chr16	+	1404	10	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	3935	0	-2011	0	3prime_fragment	FALSE	canonical	3	2657	junction_1	181.446111443659	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	20321501	20328073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
tx.4714	chr16	+	1905	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	26	149	-15	-149	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	850	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGGCTAAATGTTAAT	1379	False	NA	NA	False	NA	NA	NA	20354253	20362657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
tx.4715	chr16	+	2457	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	74	559	7	2	multi-exon	TRUE	canonical	3	293	junction_13	17.6705970470723	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCCTCTCTGCTCGT	NA	False	NA	NA	False	NA	NA	NA	20367400	20379570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
tx.4716	chr16	-	1328	8	NNC	ENSMUSG00000033809.16	novel	1308	8	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	136.842975705734	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAAGTTAGTGGTTGCTC	NA	False	NA	NA	False	NA	NA	NA	20429501	20424206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20429292
tx.4717	chr16	-	1427	9	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.475578621378	242	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAAAGTTAGTGGTTGC	NA	False	NA	NA	False	NA	NA	NA	20429502	20424208	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
tx.4718	chr16	+	994	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	0	140	0	2	multi-exon	FALSE	canonical	3	220	junction_2	23	193	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTTCTAGGATTTT	5899	False	NA	NA	False	NA	NA	NA	20430342	20437621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_20430571_20436375_20436660_20437139
tx.4719	chr16	+	2930	21	FSM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	31	0	-21	0	multi-exon	FALSE	canonical	3	2673	junction_8	225.447882003801	513	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	NA	False	NA	NA	NA	20470432	20482164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
tx.472	chr1	-	556	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	9	0	4	0	multi-exon	FALSE	canonical	3	59	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTCCACAAGATGCACG	NA	False	NA	NA	False	NA	NA	NA	138784581	138779720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_138779912_138781308_138781411_138784318
tx.4720	chr16	+	523	3	ISM	ENSMUSG00000006998.17	ENSMUST00000172207.8	3001	21	10464	0	2749	0	3prime_fragment	FALSE	canonical	3	2849	junction_2	177	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	NA	False	NA	NA	NA	20480917	20482164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_20480970_20481371_20481491_20481812
tx.4721	chr16	+	1857	11	ISM	ENSMUSG00000045983.17	ENSMUST00000132320.8	5004	26	7644	-2	1830	0	3prime_fragment	FALSE	canonical	3	1581	junction_2	98.883820719064	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	5771	False	NA	NA	False	NA	NA	NA	20504669	20511633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
tx.4722	chr16	+	1823	10	ISM	ENSMUSG00000045983.17	ENSMUST00000132320.8	5004	26	7873	-2	2059	0	3prime_fragment	FALSE	canonical	3	1581	junction_1	104.232645771104	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	6000	False	NA	NA	False	NA	NA	NA	20504898	20511633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
tx.4723	chr16	-	1451	9	ISM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	7158	2	167	-2	3prime_fragment	TRUE	canonical	3	219	junction_5	22.2819293374699	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGCTGTTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	20527709	20521715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383
tx.4724	chr16	+	824	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	126	0	-39	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	617	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	1030	False	NA	NA	False	NA	NA	NA	20536540	20541017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
tx.4725	chr16	-	1549	6	NNC	ENSMUSG00000022847.16	novel	2416	6	NA	NA	-3	3155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.81019877474458	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTAAACTCTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	20549380	20540048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_20540933_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252
tx.4726	chr16	+	1253	5	ISM	ENSMUSG00000006958.15	ENSMUST00000115423.8	2417	14	2711	-2	-368	2	3prime_fragment	FALSE	canonical	3	6	junction_4	2.06155281280883	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTTGTTTCTACTCC	5933	False	NA	NA	False	NA	NA	NA	20554587	20556904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091
tx.4727	chr16	+	896	3	FSM	ENSMUSG00000033653.19	ENSMUST00000127903.2	722	3	81	-255	81	-1	multi-exon	FALSE	canonical	1	8	junction_1	94.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGGCCTGCCAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	21446461	21463421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_21446726_21459428_21459510_21462870
tx.4728	chr16	+	593	3	FSM	ENSMUSG00000097290.10	ENSMUST00000209449.2	580	3	1	-14	1	0	multi-exon	FALSE	canonical	3	94	junction_2	32	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTGAAAGGTCCATG	NA	False	NA	NA	False	NA	NA	NA	21613092	21627790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_21613197_21614599_21614726_21627427
tx.4729	chr16	+	727	4	FSM	ENSMUSG00000097290.10	ENSMUST00000211443.2	767	4	40	0	2	0	multi-exon	FALSE	canonical	3	20	junction_2	60.8896999134957	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTGAAAGGTCCATG	NA	False	NA	NA	False	NA	NA	NA	21613107	21627790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_21613197_21614599_21614726_21625720_21625870_21627427
tx.473	chr1	+	610	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	-30	0	19	0	multi-exon	FALSE	canonical	3	64	junction_1	245.711664806989	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	143615322	143622514	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
tx.4730	chr16	-	1196	4	FSM	ENSMUSG00000022856.10	ENSMUST00000232635.2	1184	4	-11	-1	10	0	multi-exon	FALSE	canonical	2	6	junction_3	70.6304938866115	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	9200	False	NA	NA	False	NA	NA	NA	21766292	21753075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21766117
tx.4731	chr16	-	1359	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	1	0	1	0	multi-exon	FALSE	canonical	3	143	junction_1	14.1244468918255	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	9191	False	NA	NA	False	NA	NA	NA	21766301	21753075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
tx.4732	chr16	-	2674	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	155	1094	5	476	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGCCTGTTAGAGGAAT	NA	False	NA	NA	False	NA	NA	NA	21814258	21773660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
tx.4733	chr16	+	3110	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	-2	1391	-2	-3	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTCTGATAATTTTTC	2200	False	NA	NA	False	NA	NA	NA	21828231	21866628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
tx.4734	chr16	+	500	2	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	20136	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGGTGACATCTCTT	NA	False	NA	NA	False	NA	NA	NA	21867444	21867993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_21867656_21867704
tx.4735	chr16	-	3643	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	254	2	-26	-2	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGGTGTCTTGGTGTC	2527	False	NA	NA	False	NA	NA	NA	21981795	21877760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
tx.4736	chr16	-	2225	5	ISM	ENSMUSG00000033581.18	ENSMUST00000134188.8	3267	14	20901	-17	-4520	-2	3prime_fragment	FALSE	canonical	3	902	junction_2	64.8478989636519	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21886967	21877806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892
tx.4737	chr16	-	1244	3	ISM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	6748	-687	3354	687	3prime_fragment	TRUE	canonical	3	2015	junction_2	44.5	669	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATATATTGGCCAAGT	8866	False	NA	NA	False	NA	NA	NA	22067249	22064510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_22065617_22065939_22066014_22067185
tx.4738	chr16	-	2350	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	-3	-660	-3	646	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	342	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATATTGTTCTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	22084679	22064551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
tx.4739	chr16	-	2013	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	76	1314	-3	585	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	1280	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTTGGTTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	22084679	22064612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
tx.474	chr1	+	663	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	49	2625	-4	0	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	143615343	143622514	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
tx.4740	chr16	-	3215	7	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	24711	-7	-9974	0	3prime_fragment	TRUE	canonical	3	940	junction_4	61.8456860976486	158	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	22230553	22200058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
tx.4741	chr16	-	3464	8	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	23538	-7	-11147	0	3prime_fragment	FALSE	canonical	3	304	junction_7	264.973159980788	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	22231726	22200058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594
tx.4742	chr16	+	956	4	NNC	ENSMUSG00000089663.2	novel	2507	2	NA	NA	-291	-1103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTAGACTCCGTGTTC	NA	False	NA	NA	False	NA	NA	NA	22367011	22368796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_22367125_22367243_22367331_22367420_22367502_22368121
tx.4743	chr16	-	2643	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	129	4455	0	-256	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTGAGTGGTTTGC	NA	False	NA	NA	False	NA	NA	NA	22676290	22636418	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
tx.4744	chr16	+	1889	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	19	19	-2	-19	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	436	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTGTTTAGAAGGTAC	NA	False	NA	NA	False	NA	NA	NA	22676613	22691119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
tx.4745	chr16	-	959	4	NNC	ENSMUSG00000116831.2	novel	1769	4	NA	NA	-18	-5529	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.37704215656966	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTTGAAGCTGATGCCA	NA	False	NA	NA	False	NA	NA	NA	22713154	22699261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_22699918_22700012_22700136_22705778_22705854_22713049
tx.4746	chr16	+	1283	6	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	1828	0	-524	0	3prime_fragment	FALSE	canonical	3	93	junction_1	9.66643677887566	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTTCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	22712984	22718193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_22713186_22713544_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
tx.4747	chr16	+	1645	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	-146	21	-98	0	multi-exon	TRUE	canonical	0	0	junction_2	163.600059877241	359	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	22736985	22758507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
tx.4748	chr16	+	1649	8	FSM	ENSMUSG00000022871.14	ENSMUST00000023587.12	1544	8	-100	-5	-100	0	multi-exon	FALSE	canonical	0	0	junction_2	202.97702694982	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	22738886	22758507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_22739246_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
tx.4749	chr16	-	859	7	ISM	ENSMUSG00000060459.15	ENSMUST00000115349.9	1577	11	25027	0	-4082	0	3prime_fragment	FALSE	canonical	2	5	junction_4	2.74873708374511	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTCTCCTTTCAGCCA	NA	False	NA	NA	False	NA	NA	NA	22822791	22804603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_22804819_22806994_22807076_22815772_22815860_22815960_22816069_22818563_22818737_22819280_22819366_22822681
tx.475	chr1	+	1324	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	4	368	0	-4	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	531	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTAAACTCCATTCTTCA	NA	False	NA	NA	False	NA	NA	NA	143653013	143682675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
tx.4750	chr16	+	1894	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	314	0	0	0	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	1633	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	NA	NA	NA	22926507	22932697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
tx.4751	chr16	-	1277	12	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	2	35	junction_8	593.762439626105	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTGAATATACAATTTT	NA	False	NA	NA	False	NA	NA	NA	22946470	22932697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22940979_22941051_22943285_22943365_22946149_22946292_22946434
tx.4752	chr16	-	1224	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	-1	5	-1	3	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	884	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTGAATATACAATTTT	NA	False	NA	NA	False	NA	NA	NA	22946488	22932697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
tx.4753	chr16	+	1966	8	FSM	ENSMUSG00000022514.15	ENSMUST00000174202.8	2306	8	-59	399	-10	-399	multi-exon	FALSE	canonical	3	10	junction_5	3.88087934491604	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGAGCTGTTGCTCC	NA	False	NA	NA	False	NA	NA	NA	26400443	26520707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837
tx.4754	chr16	+	1768	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	124	5197	13	638	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGCCTTGCTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	27207742	27265771	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
tx.4755	chr16	-	3052	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	3	0	3	0	multi-exon	FALSE	canonical	3	119	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGTCATTATTACTT	4800	False	NA	NA	False	NA	NA	NA	28748422	28644927	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_28647762_28748204
tx.4756	chr16	+	3188	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	37	3005	-7	0	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	29398188	29470697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
tx.4757	chr16	+	3371	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	19	0	combination_of_known_junctions	TRUE	canonical	3	139	junction_4	92.8546295142155	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	29398170	29470697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
tx.4758	chr16	+	3290	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	29398197	29470697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
tx.4759	chr16	-	511	2	ISM	ENSMUSG00000097313.3	ENSMUST00000232297.2	699	4	-191	31287	47	5569	5prime_fragment	FALSE	canonical	3	93	junction_1	0	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGCGGTGTGGTATTTA	NA	False	NA	NA	False	NA	NA	NA	29765525	29757628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_29757886_29765271
tx.476	chr1	+	1325	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	-5	525	0	0	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	399	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	False	NA	NA	False	NA	NA	NA	143653013	143682679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
tx.4760	chr16	-	2130	10	FSM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	0	275	0	4	multi-exon	FALSE	canonical	3	16	junction_1	4.30618275001691	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCACGGTGGAGAACA	NA	False	NA	NA	False	NA	NA	NA	30369396	30332783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
tx.4761	chr16	-	1287	7	ISM	ENSMUSG00000022538.21	ENSMUST00000143170.9	2272	14	16256	-2	-3224	2	3prime_fragment	FALSE	canonical	2	298	junction_4	71.4912582068605	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	30390151	30380186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982
tx.4762	chr16	-	2276	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	29	875	0	2	multi-exon	FALSE	canonical	2	298	junction_4	64.525303508774	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	NA	False	NA	NA	NA	30406381	30380186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
tx.4763	chr16	-	727	6	ISM	ENSMUSG00000022538.21	ENSMUST00000144666.8	2724	11	32	9803	3	4437	5prime_fragment	FALSE	canonical	3	26	junction_1	195.314105993397	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAAATAGCTTAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	30406378	30396633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
tx.4764	chr16	-	1532	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	49	2497	49	-2497	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTCTGCTTGTCTTCGT	NA	False	NA	NA	False	NA	NA	NA	31094046	31072851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
tx.4765	chr16	-	1120	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	-236	74	49	-74	multi-exon	FALSE	canonical	3	993	junction_1	34.2746261832277	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	31094046	31076866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
tx.4766	chr16	-	822	4	ISM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	3428	-37	182	3	3prime_fragment	FALSE	canonical	3	139	junction_3	14.7044966667419	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	NA	False	NA	NA	False	NA	NA	NA	31129984	31115936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831
tx.4767	chr16	-	965	5	FSM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	51	-37	51	3	multi-exon	FALSE	canonical	3	104	junction_4	27.2614654778499	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8761	False	NA	NA	False	NA	NA	NA	31133361	31115936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216
tx.4768	chr16	-	935	6	FSM	ENSMUSG00000022548.15	ENSMUST00000130560.8	2074	6	212	927	-2	3	multi-exon	FALSE	canonical	3	43	junction_5	47.7887015935775	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8708	False	NA	NA	False	NA	NA	NA	31133414	31115936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216_31133287_31133369
tx.4769	chr16	+	1675	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	44	1403	0	1	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTGTGCATGAAAG	NA	False	NA	NA	False	NA	NA	NA	31247609	31276316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
tx.477	chr1	-	1730	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	330	1213	-2	3	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGCTATTGAACCGGA	963	False	NA	NA	False	NA	NA	NA	150268501	150238268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
tx.4770	chr16	+	1023	2	ISM	ENSMUSG00000046598.16	ENSMUST00000149039.2	807	7	18941	-748	-3084	1	3prime_fragment	FALSE	canonical	3	535	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTGTGCATGAAAG	NA	False	NA	NA	False	NA	NA	NA	31273849	31276316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_31273999_31275442
tx.4771	chr16	+	1710	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	73	287	-15	-287	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	292	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGGAGTCTCGCTAGTT	NA	False	NA	NA	False	NA	NA	NA	31767403	31777003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
tx.4772	chr16	+	1275	2	ISM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	7889	287	7756	-287	3prime_fragment	FALSE	canonical	3	441	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGGAGTCTCGCTAGTT	NA	False	NA	NA	False	NA	NA	NA	31775219	31777003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_31775248_31775756
tx.4773	chr16	-	3567	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	136	2629	12	205	multi-exon	FALSE	canonical	3	47	junction_4	8.64670064815276	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGACTGGGTATGGTC	NA	False	NA	NA	False	NA	NA	NA	31821969	31781118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
tx.4774	chr16	-	3991	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	172	1578	172	-1578	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTGTATGAATTGAGA	NA	False	NA	NA	False	NA	NA	NA	31897988	31836685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
tx.4775	chr16	-	993	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	8	-8	-2	0	multi-exon	FALSE	canonical	3	398	junction_3	17.8258239641258	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTTTGTCTTCATT	NA	False	NA	NA	False	NA	NA	NA	31918548	31903233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
tx.4776	chr16	-	1166	7	NIC	ENSMUSG00000023791.19	novel	993	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_5	171.687377391454	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTTTGTCTTCATT	NA	False	NA	NA	False	NA	NA	NA	31918565	31903233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31914370_31914527_31915817_31915882_31918287
tx.4777	chr16	-	776	5	FSM	ENSMUSG00000023791.19	ENSMUST00000147688.8	713	5	-23	-40	-2	-1	multi-exon	FALSE	canonical	3	25	junction_2	176.233332545237	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGTTAGTTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	31918548	31903236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_31903445_31904054_31904156_31911161_31911304_31915817_31915882_31918287
tx.4778	chr16	-	942	4	NNC	ENSMUSG00000023791.19	novel	670	2	NA	NA	0	-2153	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	180.697414357692	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCACTAGCTCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	31918558	31908472	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_31908938_31911161_31911304_31915817_31915882_31918287
tx.4779	chr16	+	1699	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	14	5	14	-5	multi-exon	FALSE	canonical	3	74	junction_3	4.96655480858378	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTACTGGCTTTTCTTCA	6506	False	NA	NA	False	NA	NA	NA	31918631	31926882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
tx.478	chr1	-	2899	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.9368170945323	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATGTGGAATTTTAAA	963	False	NA	NA	False	NA	NA	NA	150268501	150237061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
tx.4780	chr16	-	3237	2	ISM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	8679	0	8679	0	3prime_fragment	FALSE	canonical	3	196	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTAGTCCATGTCA	NA	False	NA	NA	False	NA	NA	NA	32057297	32048929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_32052087_32057217
tx.4781	chr16	+	1162	3	FSM	ENSMUSG00000022787.11	ENSMUST00000178573.8	1153	3	2	-11	2	2	multi-exon	FALSE	canonical	3	50	junction_1	36.5	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTTGGTTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	32066046	32075903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32066086_32070640_32071137_32075276
tx.4782	chr16	+	1855	4	ISM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	-4	11149	-2	563	5prime_fragment	TRUE	canonical	3	16	junction_3	3.09120616516523	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAGCTAGAGAGATGGT	NA	False	NA	NA	False	NA	NA	NA	32096274	32108575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936
tx.4783	chr16	+	1862	6	FSM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	8	2062	8	-2062	multi-exon	FALSE	canonical	3	5	junction_5	6.9108610172684	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAAATATTCATCGAA	NA	False	NA	NA	False	NA	NA	NA	32096286	32117662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
tx.4784	chr16	+	3354	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	-32	6991	-32	-1139	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGAGTCAAAGTTCTC	8220	False	NA	NA	False	NA	NA	NA	32151042	32205574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
tx.4785	chr16	+	744	4	FSM	ENSMUSG00000014075.16	ENSMUST00000080316.8	720	4	-20	-4	-20	0	multi-exon	FALSE	canonical	3	12	junction_2	127.027556065603	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	32238543	32247917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32238746_32241637_32241772_32245675_32245740_32247573
tx.4786	chr16	+	801	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	37	0	-7	0	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	32238556	32247917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
tx.4787	chr16	+	869	6	NNC	ENSMUSG00000014075.16	novel	838	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	122.726688214096	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	32238576	32247917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_32238746_32241637_32241772_32244058_32244129_32244971_32245060_32245675_32245740_32247573
tx.4788	chr16	+	1787	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-24	3026	-21	7	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGATTCCCTGAGTGT	2465	False	NA	NA	False	NA	NA	NA	32249717	32290862	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
tx.4789	chr16	+	1749	8	ISM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-11	4108	-8	248	5prime_fragment	FALSE	canonical	3	61	junction_1	11.4481974340852	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTTTGCTGGCGT	2478	False	NA	NA	False	NA	NA	NA	32249730	32289780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868
tx.479	chr1	+	2226	17	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	91	35233	-43	739	5prime_fragment	FALSE	canonical	3	414	junction_6	52.1970051224206	14	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAGTGAGAAACTTCAA	NA	False	NA	NA	False	NA	NA	NA	150269091	150290453	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416
tx.4790	chr16	-	1459	9	FSM	ENSMUSG00000035699.9	ENSMUST00000042042.9	2618	9	127	1032	-49	-13	multi-exon	FALSE	canonical	3	30	junction_3	5.50993421013355	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGCTTGCACAAGACACAC	NA	False	NA	NA	False	NA	NA	NA	32306570	32294353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_32294697_32295190_32295297_32295984_32296132_32296365_32296478_32297122_32297282_32297533_32297608_32298467_32298623_32304952_32305048_32306302
tx.4791	chr16	+	1352	2	FSM	ENSMUSG00000116957.2	ENSMUST00000231549.2	1207	2	-98	-47	-98	47	multi-exon	TRUE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTCTC	NA	False	NA	NA	False	NA	NA	NA	32368930	32372573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32369240_32371530
tx.4792	chr16	+	4823	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	63	4	0	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8020	False	NA	NA	False	NA	NA	NA	32427800	32451608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
tx.4793	chr16	-	2241	7	ISM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	-6	20493	-6	-6696	5prime_fragment	FALSE	canonical	3	55	junction_4	8.20060973342836	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTTGCCCTTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	32688727	32662590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
tx.4794	chr16	+	3444	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	28	840	2	-840	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	116	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCTGAGCTATAAAGA	NA	False	NA	NA	False	NA	NA	NA	32698178	32728405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
tx.4795	chr16	-	3270	5	ISM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	25251	1585	-7002	-1585	3prime_fragment	FALSE	canonical	3	58	junction_2	1.29903810567666	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCTGCACGAACAAG	NA	False	NA	NA	False	NA	NA	NA	32851309	32834637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144
tx.4796	chr16	-	2321	11	FSM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	-7	3304	-7	633	multi-exon	TRUE	canonical	2	4	junction_9	25.6242073048124	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGGGTCTCATGTG	1165	False	NA	NA	False	NA	NA	NA	32876567	32836356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873993_32874065_32876520
tx.4797	chr16	-	1271	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6391	-5	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTCTCACCTAGCATC	6111	False	NA	NA	False	NA	NA	NA	32863849	32836994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
tx.4798	chr16	+	480	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	-2	13	-2	0	multi-exon	FALSE	canonical	3	3858	junction_1	2402.68870226669	405	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCCTAAATTGAGTT	NA	False	NA	NA	False	NA	NA	NA	32876820	32880546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
tx.4799	chr16	+	482	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	17	11	1	0	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	1249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	NA	False	NA	NA	NA	32876852	32880535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
tx.48	chr1	-	1421	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	0	5071	0	2943	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCTGAGCCGCCAGATG	NA	False	NA	NA	False	NA	NA	NA	21149453	21071593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
tx.480	chr1	+	242	2	ISM	ENSMUSG00000006005.19	ENSMUST00000130779.2	229	3	327	-141	327	3	3prime_fragment	FALSE	canonical	3	790	junction_1	0	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	5520	False	NA	NA	False	NA	NA	NA	150324948	150325683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_150324990_150325482
tx.4800	chr16	+	2467	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-13	707	-11	-3	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	212	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTTGTATTATTTTAA	9270	False	NA	NA	False	NA	NA	NA	33071800	33119932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
tx.4801	chr16	-	717	2	FSM	ENSMUSG00000097318.3	ENSMUST00000231849.2	665	2	-52	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGAATTCTCTCCTTG	NA	False	NA	NA	False	NA	NA	NA	33201097	33200223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_33200729_33200885
tx.4802	chr16	-	745	2	FSM	ENSMUSG00000097318.3	ENSMUST00000180923.2	737	2	-7	-1	-7	0	multi-exon	FALSE	canonical	3	44	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGAATTCTCTCCTTG	NA	False	NA	NA	False	NA	NA	NA	33201104	33200223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_33200750_33200885
tx.4803	chr16	+	3422	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-15	6423	-15	584	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCACTATTTAAAAGCCTA	NA	False	NA	NA	False	NA	NA	NA	33201190	33318310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
tx.4804	chr16	+	2649	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	2	5	2	-3	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTTTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	33337699	33483773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
tx.4805	chr16	+	2477	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	65	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	14.3611648397877	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	33337762	33483778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
tx.4806	chr16	-	1636	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	34	1814	-1	-1802	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	656	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGACTGGTATTTGTTT	8674	False	NA	NA	False	NA	NA	NA	33787374	33776965	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
tx.4807	chr16	-	563	2	Antisense	novelGene_ENSMUSG00000022832.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTCTTAGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	34488792	34477888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_-_34478284_34488624
tx.4808	chr16	+	4013	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	-22	8	0	0	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGAATTTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	34511079	34545564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
tx.4809	chr16	+	997	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	1	-2599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	1278	3	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTACATAAAGCATCC	NA	False	NA	NA	False	NA	NA	NA	34842798	34926948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_34843006_34846194_34846313_34895957_34896065_34920125_34920248_34922315_34922495_34926684
tx.481	chr1	+	1086	2	ISM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	9	6576	0	-6576	5prime_fragment	FALSE	canonical	3	1410	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGGCTGGAGATGTAG	NA	False	NA	NA	False	NA	NA	NA	151220268	151225974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_151220507_151225126
tx.4810	chr16	-	1668	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	46	2278	-20	655	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTCTTCCAAATTCTT	NA	False	NA	NA	False	NA	NA	NA	35184242	35133778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
tx.4811	chr16	-	1732	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_16	132.890697567587	23	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGAGTATGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	35311253	35217677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311189
tx.4812	chr16	-	1820	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	-10	-1	-10	1	multi-exon	FALSE	canonical	3	428	junction_7	56.9566378374812	186	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTAGAGTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	35311253	35217680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
tx.4813	chr16	+	1595	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	14	94	14	-94	multi-exon	TRUE	canonical	3	531	junction_3	35.6118531058502	561	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGTGTATATTTGCTTT	5418	False	NA	NA	False	NA	NA	NA	35590758	35645824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
tx.4814	chr16	+	1079	5	ISM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	43540	94	43508	-94	3prime_fragment	FALSE	canonical	3	565	junction_1	26.042033330752	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGTGTATATTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	35634284	35645824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
tx.4815	chr16	+	1587	4	ISM	ENSMUSG00000022906.16	ENSMUST00000023622.13	2973	10	24850	0	15577	0	3prime_fragment	FALSE	canonical	3	23	junction_2	8.37987005998436	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTGAATCGTGAATG	8437	False	NA	NA	False	NA	NA	NA	35784230	35792975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_35784735_35788019_35788157_35789960_35790136_35792204
tx.4816	chr16	+	3904	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	21	1114	11	886	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGTGGCTGATTTC	NA	False	NA	NA	False	NA	NA	NA	35803705	35856387	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
tx.4817	chr16	-	690	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-57	85	22	0	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	514	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTCTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	35891942	35864215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
tx.4818	chr16	+	674	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	391	8	-4	1	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	1110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTACATATTTATTTG	NA	False	NA	NA	False	NA	NA	NA	35892445	35912482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
tx.4819	chr16	+	2735	7	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14179	-1	-7321	1	3prime_fragment	FALSE	canonical	0	0	junction_6	113.338235188111	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTCCTGTGTTTGGCA	NA	False	NA	NA	False	NA	NA	NA	36528578	36547104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
tx.482	chr1	+	3454	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	53	4	12	3	multi-exon	TRUE	canonical	3	1145	junction_2	98.7764172879585	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	NA	False	NA	NA	NA	151220280	151240169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
tx.4820	chr16	+	2341	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14253	483	-7307	-420	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	43	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	NA	False	NA	NA	NA	36528592	36546683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
tx.4821	chr16	+	2469	6	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	15605	61	-5955	2	3prime_fragment	FALSE	canonical	3	275	junction_3	16.2061716639063	29	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCCTGTGTTTGGCAG	NA	False	NA	NA	False	NA	NA	NA	36529944	36547105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
tx.4822	chr16	+	1401	2	ISM	ENSMUSG00000022900.15	ENSMUST00000089618.10	2850	7	28103	426	6546	-420	3prime_fragment	FALSE	canonical	3	279	junction_1	0	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	NA	False	NA	NA	NA	36542445	36546683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_36543042_36545878
tx.4823	chr16	+	2231	15	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	69.4050518657669	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATGTTATTTCAATG	NA	False	NA	NA	False	NA	NA	NA	36648748	36693081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
tx.4824	chr16	+	1624	13	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	67.3747294366862	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAAGTCTGAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	36648748	36679933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
tx.4825	chr16	+	1677	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAGTCTGAAAGCATGT	NA	False	NA	NA	False	NA	NA	NA	36648750	36679935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
tx.4826	chr16	+	2273	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	-10	-6	-9	-2	multi-exon	FALSE	canonical	3	136	junction_14	52.2779073016196	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATGTTATTTCAATG	NA	False	NA	NA	False	NA	NA	NA	36648759	36693081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
tx.4827	chr16	+	1092	5	ISM	ENSMUSG00000034206.16	ENSMUST00000183112.8	7386	26	-18	77401	-18	1	5prime_fragment	FALSE	canonical	3	18	junction_3	8.6421930087218	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTGTTTA	3730	False	NA	NA	False	NA	NA	NA	36832129	36837953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560
tx.4828	chr16	-	3016	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	63	5	50	-5	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGAGGTGGTTATACTC	NA	False	NA	NA	False	NA	NA	NA	37360088	37330156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
tx.4829	chr16	+	2018	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	13	0	-2	0	multi-exon	FALSE	canonical	3	98	junction_4	11.0896163971859	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTCATTTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	37360259	37392747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
tx.483	chr1	+	2744	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	39	0	-30	0	multi-exon	FALSE	canonical	3	234	junction_7	396.626282743927	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGTCTGTAGCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	151220298	151232550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
tx.4830	chr16	-	467	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	71	433	-16	-2	multi-exon	FALSE	canonical	3	6062	junction_1	348	1657	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTTTCTTTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	37474744	37467964	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_37468082_37469375_37469523_37474541
tx.4831	chr16	+	3612	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	183	-6	1	6	multi-exon	FALSE	canonical	3	116	junction_9	10.1607086367044	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTTGGTTTCCTTATT	5334	False	NA	NA	False	NA	NA	NA	37597417	37656882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
tx.4832	chr16	-	1013	3	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGGCGTTGGAGAGAT	2453	False	NA	NA	False	NA	NA	NA	37833356	37829314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr16_-_37830178_37831065_37831168_37833308
tx.4833	chr16	-	1905	7	NNC	ENSMUSG00000022809.5	novel	2553	9	NA	NA	40670	-26	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	2.28521820013368	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTGTGTACGGCAAACT	NA	False	NA	NA	False	NA	NA	NA	38074516	38068710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_38069752_38071134_38071241_38071489_38071607_38071755_38071899_38073189_38073465_38074101_38074290_38074481
tx.4834	chr16	-	896	4	ISM	ENSMUSG00000022805.18	ENSMUST00000023501.16	3048	17	37256	-4	36925	4	3prime_fragment	FALSE	canonical	3	28	junction_1	8.01387685344754	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTTTGTAAAGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	38125249	38118111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140
tx.4835	chr16	+	409	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	26	9	-5	-9	multi-exon	FALSE	canonical	3	2901	junction_2	455	2102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAACCGTCTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	38167378	38173116	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_38167570_38169602_38169692_38172987
tx.4836	chr16	+	3693	2	FSM	ENSMUSG00000046516.11	ENSMUST00000120495.2	3690	2	0	-3	0	2	multi-exon	FALSE	canonical	3	3811	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATGCTGAACCGTCT	NA	False	NA	NA	False	NA	NA	NA	38167383	38173109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_38167570_38169602
tx.4837	chr16	-	917	5	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	25420	0	10069	0	3prime_fragment	FALSE	canonical	3	158	junction_2	28.8823042709546	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	38228087	38216478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953
tx.4838	chr16	-	1553	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	41	1372	20	-1372	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	759	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	38273024	38265763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
tx.4839	chr16	+	1237	2	Antisense	novelGene_ENSMUSG00000002844.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTATTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	38266776	38271459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_+_38266899_38270344
tx.484	chr1	+	1570	4	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	16425	156	-304	-156	3prime_fragment	FALSE	canonical	3	1382	junction_2	23.7627158941622	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	151236693	151240010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_151236810_151236893_151237026_151237212_151237387_151238862
tx.4840	chr16	-	1569	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	-2	6	-2	-6	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATTGTGTTGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	38343027	38318714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
tx.4841	chr16	-	2927	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	-2	-3	-2	0	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6264	False	NA	NA	False	NA	NA	NA	38370586	38345498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
tx.4842	chr16	-	2722	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	36	0	0	0	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	197	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6266	False	NA	NA	False	NA	NA	NA	38370584	38345498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
tx.4843	chr16	-	1165	7	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	46	9206	10	-244	5prime_fragment	FALSE	canonical	3	749	junction_6	99.483108560644	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTTGTTTT	6276	False	NA	NA	False	NA	NA	NA	38370574	38354704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
tx.4844	chr16	+	1858	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-19	-194	-19	38	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	321	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7051	False	NA	NA	False	NA	NA	NA	38379040	38411746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
tx.4845	chr16	-	3022	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	35.9374456521328	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43710019	43681769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
tx.4846	chr16	+	948	6	ISM	ENSMUSG00000022701.19	ENSMUST00000122014.8	1822	8	-28	24021	-28	7064	5prime_fragment	FALSE	canonical	3	68	junction_1	7.7614431647729	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAAACTGAG	NA	False	NA	NA	False	NA	NA	NA	43710233	43735909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812
tx.4847	chr16	-	2270	2	ISM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	50245	0	49920	0	3prime_fragment	FALSE	canonical	3	471	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	43909423	43905764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_43907880_43909268
tx.4848	chr16	-	3729	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	264	241	-23	2	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAGTTCTCTATTTATT	NA	False	NA	NA	False	NA	NA	NA	43959404	43906005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
tx.4849	chr16	+	2375	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-15	2127	8	65	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTATAACTCTTACGTT	NA	False	NA	NA	False	NA	NA	NA	43960200	43981602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
tx.485	chr1	+	1338	2	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	17087	-3	358	3	3prime_fragment	FALSE	canonical	3	1437	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	NA	False	NA	NA	NA	151237355	151240169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_151237387_151238862
tx.4850	chr16	+	2367	5	FSM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	-41	1231	-8	67	multi-exon	FALSE	canonical	3	375	junction_1	525.255652040033	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATAACTCTTACGTTTT	NA	False	NA	NA	False	NA	NA	NA	43960207	43981604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825
tx.4851	chr16	+	3074	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	293	1260	0	94	multi-exon	FALSE	canonical	0	0	junction_1	35.5942143737688	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6401	False	NA	NA	False	NA	NA	NA	44167776	44207600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
tx.4852	chr16	+	2724	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	-19	161	-19	-161	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTAAAACCATTATCTAA	NA	False	NA	NA	False	NA	NA	NA	44544644	44557486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
tx.4853	chr16	+	2259	6	ISM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	5333	152	2515	-152	3prime_fragment	FALSE	canonical	3	45	junction_3	7.00285656000464	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTATCTAATCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	44549996	44557495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
tx.4854	chr16	-	1170	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	15	2230	11	144	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTCTCTTATAAATGT	NA	False	NA	NA	False	NA	NA	NA	44566711	44559360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
tx.4855	chr16	-	2960	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	35	1238	-16	1135	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTGTACTATGTC	NA	False	NA	NA	False	NA	NA	NA	44979034	44961173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
tx.4856	chr16	+	1336	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	108	613	108	31	multi-exon	FALSE	canonical	3	353	junction_3	33.1011472673263	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTTTTCATTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	44979255	45008288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
tx.4857	chr16	+	309	2	ISM	ENSMUSG00000022663.4	ENSMUST00000150390.2	2081	10	20311	-33	20311	33	3prime_fragment	FALSE	canonical	3	467	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTCATTTCCTGTCA	NA	False	NA	NA	False	NA	NA	NA	45006556	45008290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_45006598_45008022
tx.4858	chr16	-	299	2	FSM	ENSMUSG00000022661.15	ENSMUST00000172091.2	281	2	-14	-4	-9	4	multi-exon	FALSE	canonical	3	15	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCCTATCCTTTGACT	NA	False	NA	NA	False	NA	NA	NA	45229395	45227552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_45227675_45229218
tx.4859	chr16	-	1236	4	FSM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	4	0	4	0	multi-exon	FALSE	canonical	3	70	junction_1	1.63299316185545	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAGTATAACTTTATT	NA	False	NA	NA	False	NA	NA	NA	45544967	45531592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_45532073_45533294_45533398_45543285_45543461_45544489
tx.486	chr1	-	3616	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	70	2	51	-2	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTGCTTTTCCGTTTA	NA	False	NA	NA	False	NA	NA	NA	151304136	151243451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
tx.4860	chr16	-	1094	6	NNC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	119.092233164048	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAGTCCTGTGCATTCT	NA	False	NA	NA	False	NA	NA	NA	45563272	45550082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_45550357_45552069_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
tx.4861	chr16	-	1446	6	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-13	417	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	144.088028649156	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAACTAAAATTACTGT	NA	False	NA	NA	False	NA	NA	NA	45563283	45551496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45560681_45560866_45563139
tx.4862	chr16	-	1222	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-2	430	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTTTTTTTAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	45563272	45551483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
tx.4863	chr16	-	1402	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	35	1411	-13	415	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTAAAACTAAAATTACT	NA	False	NA	NA	False	NA	NA	NA	45563283	45551498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
tx.4864	chr16	-	2046	2	Genic_Genomic	ENSMUSG00000048087.7	novel	2093	1	NA	NA	0	25	multi-exon	FALSE	canonical	1	11	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTTATAAATTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	45975440	45973322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr16_-_45974209_45974280
tx.4865	chr16	+	1475	7	FSM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	5	-1	5	1	multi-exon	FALSE	canonical	3	369	junction_4	76.5188792971309	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	48104102	48114601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
tx.4866	chr16	+	1784	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	0	164	0	-164	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTCTTGAGTATTT	NA	False	NA	NA	False	NA	NA	NA	48130839	48139922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
tx.4867	chr16	+	1428	5	ISM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	3517	210	3517	-210	3prime_fragment	FALSE	canonical	3	478	junction_2	37.9407432715808	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTGGTTGGTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	48134356	48139876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
tx.4868	chr16	-	2036	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAAGTGTGTGTTCA	NA	False	NA	NA	False	NA	NA	NA	48434260	48419223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_-_48421063_48434063
tx.4869	chr16	-	722	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	705	junction_1	0	54	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTGGCTGTGAAGAC	NA	False	NA	NA	False	NA	NA	NA	48422130	48420464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_-_48421063_48422006
tx.487	chr1	-	2218	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	67	25	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	42.2765651215601	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTATTGACCAATCTCA	NA	False	NA	NA	False	NA	NA	NA	151304120	151244089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
tx.4870	chr16	-	692	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTGGCTGTGAAGAC	NA	False	NA	NA	False	NA	NA	NA	48422136	48420464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_-_48421063_48422042
tx.4871	chr16	+	1000	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17028	13	at_least_one_novel_splicesite	FALSE	canonical	3	485	junction_1	244.404064898224	65	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGATTGCTATTG	723	False	NA	NA	False	NA	NA	NA	48432057	48451276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
tx.4873	chr16	-	2108	20	ISM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	-139	16260	85	3403	5prime_fragment	FALSE	canonical	3	44	junction_7	20.01855095334	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGATTATTGTAT	4282	False	NA	NA	False	NA	NA	NA	48814443	48762501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
tx.4874	chr16	+	3978	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	0	-4	0	0	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAGATCAGTACTTTG	NA	False	NA	NA	False	NA	NA	NA	48814550	48840072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
tx.4875	chr16	+	1887	5	ISM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	-29	52120	-29	1139	5prime_fragment	FALSE	canonical	3	148	junction_2	8.03118920210451	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTATAAGCTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	49519566	49533369	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201
tx.4876	chr16	+	1607	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	-15	1009	-15	0	multi-exon	FALSE	canonical	3	141	junction_7	10.0915806492343	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTCAGAGAAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	49519580	49584480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
tx.4877	chr16	+	1271	10	NIC	ENSMUSG00000055447.20	novel	1358	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	22.7107414625278	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	NA	False	NA	NA	NA	49676019	49731444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49731231
tx.4878	chr16	+	1334	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229101.2	1358	11	24	0	1	0	multi-exon	FALSE	canonical	3	19	junction_2	27.0739727413618	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	NA	False	NA	NA	NA	49676019	49731444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49731231
tx.4879	chr16	+	1893	8	NIC	ENSMUSG00000055447.20	novel	5250	10	NA	NA	1	669	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	27.9335947254505	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	49676019	49732123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49731231
tx.488	chr1	+	2482	15	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	47.2939138337512	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	NA	False	NA	NA	NA	151304387	151333912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
tx.4880	chr16	+	1979	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229206.2	1316	11	16	-679	5	669	multi-exon	FALSE	canonical	3	21	junction_9	24.8766959220874	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	49676023	49732123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
tx.4881	chr16	+	1243	9	NIC	ENSMUSG00000055447.20	novel	1313	10	NA	NA	8	4	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	11.8532695911297	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATCCCATTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	49676026	49731448	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
tx.4882	chr16	+	1302	10	FSM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	19	3929	8	0	multi-exon	FALSE	canonical	3	19	junction_2	24.0960014099978	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	NA	False	NA	NA	NA	49676026	49731444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
tx.4883	chr16	-	1652	11	ISM	ENSMUSG00000022641.16	ENSMUST00000089399.11	2539	14	-9	14364	6	5	5prime_fragment	FALSE	canonical	1	5	junction_9	3.56230262611138	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAACAAACTGGATC	9721	False	NA	NA	False	NA	NA	NA	50252746	50045204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
tx.4884	chr16	-	1784	2	FSM	ENSMUSG00000022639.15	ENSMUST00000186535.2	2896	2	-11	1123	-2	3	multi-exon	FALSE	canonical	3	6	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATAGGAGTGTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	50553102	50547110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_50548573_50552780
tx.4885	chr16	-	2953	6	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-121	-3244	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	2.13541565040626	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGTATTTCTTGACTT	NA	False	NA	NA	False	NA	NA	NA	55715769	55663559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158_55686914_55710944_55711213_55715650
tx.4886	chr16	-	1550	4	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-105	-20003	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2.35702260395516	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGTGTCCTTAATTCT	NA	False	NA	NA	False	NA	NA	NA	55715753	55680318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_55680743_55686158_55686914_55710944_55711213_55715650
tx.4887	chr16	-	2817	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	33	5061	11	2	multi-exon	TRUE	canonical	3	23	junction_5	7.29383301152419	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACACCAATAATGTTT	NA	False	NA	NA	False	NA	NA	NA	55755185	55725311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
tx.4888	chr16	+	646	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	31	0	31	0	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	564	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	55786668	55791798	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
tx.4889	chr16	-	2363	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850047	55835869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
tx.489	chr1	+	2666	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	95	-12	0	12	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGCGTGACTTACTGTTC	NA	False	NA	NA	False	NA	NA	NA	151304387	151333924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
tx.4890	chr16	-	2445	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-15	-1492	-5	-1	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850054	55835869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
tx.4891	chr16	-	2206	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	-7	1	3	-1	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850066	55835869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
tx.4892	chr16	-	2258	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	36	1	3	-1	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55850066	55835869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
tx.4893	chr16	-	634	4	FSM	ENSMUSG00000071533.12	ENSMUST00000122253.2	792	4	-4	162	-4	-162	multi-exon	FALSE	canonical	3	1778	junction_3	312.848206004126	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACACGTGCACATTTTT	NA	False	NA	NA	False	NA	NA	NA	55850063	55838644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_55838891_55842417_55842493_55844586_55844802_55849965
tx.4894	chr16	-	569	4	ISM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	5	2780	-5	-166	5prime_fragment	FALSE	canonical	3	494	junction_3	909.968131310103	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTACACACGTGCACAT	NA	False	NA	NA	False	NA	NA	NA	55850054	55838648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_55838891_55842417_55842493_55844586_55844750_55849965
tx.4895	chr16	-	1864	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	33	1105	33	-1105	multi-exon	FALSE	canonical	3	404	junction_1	0	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGAATATCAGACTTT	7419	False	NA	NA	False	NA	NA	NA	55858149	55854076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_55855655_55857863
tx.4896	chr16	+	938	6	FSM	ENSMUSG00000052917.16	ENSMUST00000202799.4	698	6	-35	-205	16	205	multi-exon	FALSE	canonical	3	17	junction_5	9.74884608556315	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATGTATTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	55895802	55959611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55959347
tx.4897	chr16	+	1020	7	ISM	ENSMUSG00000052917.16	ENSMUST00000202000.2	3218	8	-38	2646	18	208	5prime_fragment	FALSE	canonical	3	17	junction_6	8.60232526704263	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTATTTCTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	55895804	55959614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55959347
tx.4898	chr16	+	1147	7	FSM	ENSMUSG00000052917.16	ENSMUST00000049128.11	1130	7	-16	-1	-16	1	multi-exon	FALSE	canonical	3	14	junction_6	9.3407708461347	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAATGACATTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	55895810	55946903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55946503
tx.4899	chr16	-	2083	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCATATAATGTTTATAG	4111	False	NA	NA	False	NA	NA	NA	55936622	55932439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_-_55934491_55936590
tx.49	chr1	+	1138	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	30	0	30	0	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTCATTCATTTCTAT	NA	False	NA	NA	False	NA	NA	NA	21288828	21300391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
tx.490	chr1	-	2458	3	ISM	ENSMUSG00000026484.14	ENSMUST00000185945.2	570	4	777	-1916	777	2	3prime_fragment	FALSE	canonical	3	498	junction_2	21	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTAGATGTGTACTCCT	NA	False	NA	NA	False	NA	NA	NA	151349093	151345153	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_151347169_151347388_151347561_151348822
tx.4900	chr16	-	1897	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	57	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAAATATGCATATAAT	4060	False	NA	NA	False	NA	NA	NA	55936673	55932447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_-_55934262_55936590
tx.4901	chr16	-	1857	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	88	0	-2	0	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	56537725	56510694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
tx.4902	chr16	-	1863	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	56537743	56510694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
tx.4903	chr16	+	2064	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	227	3673	227	-2853	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	56942292	56973395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
tx.4904	chr16	-	1308	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-24	2	-15	-1	multi-exon	TRUE	canonical	3	674	junction_8	39.9499687108764	407	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTGATGTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	56987719	56977029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
tx.4905	chr16	-	2139	5	ISM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	48514	0	18	0	3prime_fragment	FALSE	canonical	3	144	junction_4	21.6376408140999	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	NA	False	NA	NA	NA	57003353	56989224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213
tx.4906	chr16	-	3579	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	111	0	-20	0	multi-exon	TRUE	canonical	3	134	junction_12	18.4520326427881	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	NA	False	NA	NA	NA	57051756	56989224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
tx.4907	chr16	-	970	9	ISM	ENSMUSG00000022748.9	ENSMUST00000114371.5	1150	10	283300	2	283230	-2	3prime_fragment	TRUE	canonical	3	200	junction_5	23.459739448681	194	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACAGTTTCTCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	57143909	57122364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826
tx.4908	chr16	-	525	2	FSM	ENSMUSG00000022748.9	ENSMUST00000232413.2	529	2	6	-2	6	2	multi-exon	FALSE	canonical	3	94	junction_1	0	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTATGTTTTGTGATCT	NA	False	NA	NA	False	NA	NA	NA	57427221	57381793	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_57382126_57427028
tx.4909	chr16	+	2433	6	ISM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	2241	0	-1603	0	3prime_fragment	FALSE	canonical	3	129	junction_1	28.5895085652062	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTATTTGTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	58492895	58500749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307_58498413_58499032
tx.491	chr1	-	2665	4	ISM	ENSMUSG00000026484.14	ENSMUST00000187048.7	3201	8	24462	3	-187	-2	3prime_fragment	FALSE	canonical	3	498	junction_2	40.5709255502016	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGTTATTAGATGTGTA	NA	False	NA	NA	False	NA	NA	NA	151352100	151345158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890
tx.4910	chr16	+	2185	6	FSM	ENSMUSG00000022744.13	ENSMUST00000162057.8	1540	6	-15	-630	0	-13	multi-exon	FALSE	canonical	3	12	junction_1	183.824916700648	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTCTAAATTGTTTG	NA	False	NA	NA	False	NA	NA	NA	58548272	58554601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_58548448_58549535_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
tx.4911	chr16	+	2039	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	97	11	-16	-11	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTAAATTGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	58548369	58554603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
tx.4912	chr16	+	2147	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	12	0	12	0	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	195	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGCCGGTATATACATG	NA	False	NA	NA	False	NA	NA	NA	59292149	59312824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
tx.4913	chr16	-	1324	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	0	372	0	7	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTGTTCTGTTCATGC	NA	False	NA	NA	False	NA	NA	NA	59459530	59433683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
tx.4914	chr16	-	3501	10	FSM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	47	-20	0	20	multi-exon	FALSE	canonical	3	30	junction_2	10.3494497975067	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	62667356	62614027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_62616072_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
tx.4915	chr16	-	1134	7	ISM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	26	10310	-21	7855	5prime_fragment	FALSE	canonical	3	43	junction_1	7.97217382873427	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACATAAAGTGGAGCCAG	NA	False	NA	NA	False	NA	NA	NA	62667377	62624357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
tx.4916	chr16	+	3283	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	19	1	19	-1	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGCAATTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	62674688	62749708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
tx.4917	chr16	+	1499	2	ISM	ENSMUSG00000022912.9	ENSMUST00000127502.2	791	4	4902	-956	4902	0	3prime_fragment	FALSE	canonical	3	354	junction_1	0	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGCAATTTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	62746731	62749709	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_62746917_62748395
tx.4918	chr16	-	1340	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	214	3968	214	-3968	multi-exon	FALSE	canonical	3	170	junction_1	18.5	131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTGTGTGCCTTAGAA	NA	False	NA	NA	False	NA	NA	NA	64591310	64586466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_64587357_64589286_64589526_64591099
tx.4919	chr16	+	2333	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	34	2058	34	1463	multi-exon	FALSE	canonical	3	981	junction_2	152	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGGGTTTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	64672392	64677812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_64672600_64673161_64673389_64675913
tx.492	chr1	-	2945	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	144	71	0	-71	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTGCTTAGAGAATGT	NA	False	NA	NA	False	NA	NA	NA	151376562	151345227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
tx.4920	chr16	+	2330	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	34	1463	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	20	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGGGTTTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	64672392	64677812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_64672600_64673161_64673389_64675916
tx.4921	chr16	-	1863	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	9	0	9	0	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCCTAACGCGCATCA	NA	False	NA	NA	False	NA	NA	NA	65359603	65336013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
tx.4922	chr16	-	1643	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	30	2564	0	-946	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCAGTATTTCTAAAGTAA	4011	False	NA	NA	False	NA	NA	NA	75563679	75554473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
tx.4923	chr16	+	1442	3	ISM	ENSMUSG00000022867.12	ENSMUST00000239066.2	4986	26	100112	184	29918	-184	3prime_fragment	FALSE	canonical	3	57	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCGTAAAAGACGTAGA	NA	False	NA	NA	False	NA	NA	NA	76910705	76913484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_76910745_76911771_76911968_76912277
tx.4924	chr16	-	2740	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	-7	-1157	-7	11	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATACTTTTCAGTTTCT	3236	False	NA	NA	False	NA	NA	NA	78373552	78340419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
tx.4925	chr16	-	2725	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	-31	-1423	20	5	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATACTTTTCA	3212	False	NA	NA	False	NA	NA	NA	78373576	78340425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
tx.4926	chr16	-	2465	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-2	3664	-2	-459	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCAATAAAAAGGATAGTA	3241	False	NA	NA	False	NA	NA	NA	78373547	78340889	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
tx.4927	chr16	-	2055	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-54	643	7	503	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTTCCCGTAATCTA	3199	False	NA	NA	False	NA	NA	NA	78373589	78341073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
tx.4928	chr16	-	2037	5	NIC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	1	503	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	108.368295640376	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTTCCCGTAATCTA	3193	False	NA	NA	False	NA	NA	NA	78373595	78341073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373370
tx.4929	chr16	-	1091	10	FSM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	498	705	-14	-705	multi-exon	FALSE	canonical	3	703	junction_1	110.666443551761	1220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	84532132	84515168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
tx.493	chr1	-	3178	8	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	8	-109	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTTATCTAAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	151376698	151345265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
tx.4930	chr16	+	1475	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	1361.98577452189	2078	4	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATGTCTGGTAATATT	NA	False	NA	NA	False	NA	NA	NA	84571014	84619918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
tx.4931	chr16	+	1401	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	49	-6	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAAGTGAAATGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	84571059	84619912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
tx.4932	chr16	+	2192	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	-195	1	68	-1	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTCTTCAGAATAAACA	NA	False	NA	NA	False	NA	NA	NA	84571078	84607883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
tx.4933	chr16	-	483	4	ISM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	763	0	-30	0	3prime_fragment	FALSE	canonical	3	5740	junction_3	655.078790850553	4317	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	NA	False	NA	NA	NA	84631750	84624758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696
tx.4934	chr16	+	2499	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-18	-279	-18	279	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCTTTTGAATATT	NA	False	NA	NA	False	NA	NA	NA	84631794	84658482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
tx.4935	chr16	+	2610	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	208	2169	208	295	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCATATATGACTCTTA	NA	False	NA	NA	False	NA	NA	NA	84632219	84658498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
tx.4936	chr16	+	1847	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	39	-2	-3	2	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCCTTTGTGTAGCGT	NA	False	NA	NA	False	NA	NA	NA	87151111	87165632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
tx.4937	chr16	+	1707	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	-5	-2	-5	2	multi-exon	FALSE	canonical	3	22	junction_4	45.8768732587564	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCCTTTGTGTAGCGT	NA	False	NA	NA	False	NA	NA	NA	87151109	87165632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
tx.4938	chr16	-	2030	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	-21	0	-21	0	multi-exon	FALSE	canonical	3	39	junction_1	7.71362431027076	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTGTTATCAGTAG	NA	False	NA	NA	False	NA	NA	NA	87237482	87230294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
tx.4939	chr16	+	2155	7	FSM	ENSMUSG00000025616.15	ENSMUST00000131206.8	1405	7	-78	-672	-14	672	multi-exon	FALSE	canonical	3	153	junction_5	32.3045404445464	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCCATTTGCAGGAACC	NA	False	NA	NA	False	NA	NA	NA	87251852	87268584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241
tx.494	chr1	-	2135	3	NNC	ENSMUSG00000032666.17	novel	2548	7	NA	NA	39590	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGGCTCGATTCTTCT	NA	False	NA	NA	False	NA	NA	NA	151757388	151728152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_151730096_151755839_151755948_151757304
tx.4940	chr16	+	2895	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	308	2	-16	-2	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTATTAGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	87251898	87280403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
tx.4941	chr16	-	1842	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	3	549	3	113	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	3604	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	NA	False	NA	NA	NA	87292758	87280762	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
tx.4942	chr16	+	3275	5	FSM	ENSMUSG00000025612.6	ENSMUST00000026703.6	5867	5	-41	2633	-41	-1888	multi-exon	FALSE	canonical	1	4	junction_3	14.497844667398	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTGTTGGAGACAAACAC	NA	False	NA	NA	False	NA	NA	NA	87495791	87527601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289_87519497_87526324
tx.4943	chr16	+	1056	2	ISM	ENSMUSG00000025612.6	ENSMUST00000156958.2	2210	4	-94	6681	-35	-6681	5prime_fragment	FALSE	canonical	3	38	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCATTTGTTGTCTTAC	NA	False	NA	NA	False	NA	NA	NA	87495797	87513127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_87495945_87512218
tx.4944	chr16	+	642	5	FSM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	320.427351360648	212	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	90017640	90023217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032_90022151_90023037
tx.4945	chr16	-	1290	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	41	2	41	-2	multi-exon	FALSE	canonical	3	276	junction_1	13.865424623862	225	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTTTGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	90524251	90516201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
tx.4946	chr16	+	1391	6	FSM	ENSMUSG00000039903.19	ENSMUST00000231280.2	1692	6	111	190	-14	0	multi-exon	FALSE	canonical	2	2	junction_1	5.2687759489278	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCTGTACATTAATAA	NA	False	NA	NA	False	NA	NA	NA	90627986	90701583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_90628321_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
tx.4947	chr16	-	1119	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	285	26	-3	-26	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	336	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTGTCACATCTAAGG	NA	False	NA	NA	False	NA	NA	NA	90731717	90722722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
tx.4948	chr16	-	1409	2	ISM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	27431	0	2119	0	3prime_fragment	FALSE	canonical	3	357	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTATCTTGCTGG	NA	False	NA	NA	False	NA	NA	NA	90814000	90810924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_90812067_90813733
tx.4949	chr16	-	1670	6	ISM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	21122	2	-4190	-2	3prime_fragment	FALSE	canonical	3	305	junction_4	27.0820974076972	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTTGTATCTTGCT	NA	False	NA	NA	False	NA	NA	NA	90820309	90810926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225
tx.495	chr1	-	1681	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-183	8061	-183	318	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTTCTCCCATTCA	NA	False	NA	NA	False	NA	NA	NA	151966059	151768335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
tx.4950	chr16	+	1149	7	FSM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	-46	-4	21	4	multi-exon	FALSE	canonical	3	47	junction_6	3.19722101554181	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTGTCTCTAATGTCT	NA	False	NA	NA	False	NA	NA	NA	91169691	91190932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
tx.4951	chr16	+	507	3	ISM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	15206	-4	267	4	3prime_fragment	FALSE	canonical	3	47	junction_2	4	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTGTCTCTAATGTCT	NA	False	NA	NA	False	NA	NA	NA	91184943	91190932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_91185005_91188608_91188767_91190644
tx.4952	chr16	-	346	2	Antisense	novelGene_ENSMUSG00000022967.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTCCCACGTGCATTT	NA	False	NA	NA	False	NA	NA	NA	91293257	91291945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_-_91292210_91293175
tx.4953	chr16	-	2256	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	90	1	-46	-1	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAATCTGAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	91394598	91371391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
tx.4954	chr16	-	3303	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	6	209	6	-2	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	253	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	NA	NA	NA	91443834	91418282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
tx.4955	chr16	-	1872	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	-11	4	6	-4	multi-exon	FALSE	canonical	3	1247	junction_10	242.657701299588	216	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTGTTTTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	91443834	91430296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
tx.4956	chr16	+	426	3	ISM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-14	9283	-13	-9283	5prime_fragment	FALSE	canonical	3	478	junction_2	6	542	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAAGACAACCAGAAGA	NA	False	NA	NA	False	NA	NA	NA	91444753	91451638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_91444873_91448517_91448685_91451498
tx.4957	chr16	-	1474	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	356	135	4	69	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	1229	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATTTGATTTTGTTATC	9184	False	NA	NA	False	NA	NA	NA	91525507	91486344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
tx.4958	chr16	-	1672	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	347	5020	-5	2	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTCTCTTTTTTCTCTT	9175	False	NA	NA	False	NA	NA	NA	91525516	91491229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
tx.4959	chr16	+	1327	7	FSM	ENSMUSG00000022957.21	ENSMUST00000232198.2	1167	7	-15	-145	-15	9	multi-exon	FALSE	canonical	2	3	junction_2	3.24893144826965	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAACTGTGTAGGCCTCC	NA	False	NA	NA	False	NA	NA	NA	91700935	91709233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_91701102_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
tx.496	chr1	-	1089	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	44	0	-18	0	multi-exon	FALSE	canonical	3	212	junction_4	96.4219243740758	404	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCGTAATCATCCATCA	NA	False	NA	NA	False	NA	NA	NA	152262389	152246485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
tx.4960	chr16	-	739	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	94	5	-42	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	1952	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCGTGAGGAGCCTTGT	905	False	NA	NA	False	NA	NA	NA	91728481	91722106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
tx.4961	chr16	+	829	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	17	0	17	0	multi-exon	FALSE	canonical	3	238	junction_1	10.5	111	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	6302	False	NA	NA	False	NA	NA	NA	91855174	91909115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_91855369_91896481_91896622_91908620
tx.4962	chr16	+	512	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	5	0	5	0	multi-exon	FALSE	canonical	3	229	junction_1	48.3482735529983	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTGCATTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	92098178	92109929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
tx.4963	chr16	-	2164	4	FSM	ENSMUSG00000022951.17	ENSMUST00000232239.2	2319	4	157	-2	157	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTTGGTCGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	92262874	92188840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
tx.4964	chr16	-	1754	11	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	28.7090578041147	34	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	NA	False	NA	NA	NA	93400703	93380344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
tx.4965	chr16	-	1594	11	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	12	junction_10	36.3512035564161	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	NA	False	NA	NA	NA	93400951	93380344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400861
tx.4966	chr16	+	1056	3	FSM	ENSMUSG00000051483.10	ENSMUST00000039659.9	1237	3	14	167	14	-6	multi-exon	FALSE	canonical	3	426	junction_1	12.5	458	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGTTTACAAATGTTTT	NA	False	NA	NA	False	NA	NA	NA	93404738	93407226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_93405143_93405676_93405785_93406682
tx.4967	chr16	+	1200	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	-29	-1	-29	1	multi-exon	FALSE	canonical	3	122	junction_2	11	102	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGGTTTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	93480073	93487879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_93480502_93481934_93482043_93487215
tx.4968	chr16	+	1170	4	FSM	ENSMUSG00000022946.11	ENSMUST00000226335.2	1189	4	6	13	3	-13	multi-exon	FALSE	canonical	3	21	junction_1	5.24933858267454	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTTATTTTTGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93508824	93537549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856
tx.4969	chr16	-	1838	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-146	5	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	45	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCTTTAAATAATATAAGA	6425	False	NA	NA	False	NA	NA	NA	93591935	93589018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_93590271_93590397_93590505_93591456
tx.497	chr1	+	1806	4	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	91	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	649.932817040859	470	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCTTAATTGAATAC	NA	False	NA	NA	False	NA	NA	NA	152642383	152651331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_152642621_152644613_152644685_152647114_152647292_152650010
tx.4970	chr16	+	1309	8	ISM	ENSMUSG00000022946.11	ENSMUST00000227278.2	1573	10	1270	-1	-85	1	3prime_fragment	TRUE	canonical	3	48	junction_2	9.96319758523583	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATTGTCATGTGTATA	5819	False	NA	NA	False	NA	NA	NA	93596991	93607475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
tx.4971	chr16	+	1842	3	ISM	ENSMUSG00000039456.11	ENSMUST00000202261.5	4179	17	38763	0	10371	0	3prime_fragment	FALSE	canonical	3	566	junction_1	20	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAACTGAAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	93667771	93672961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_93668141_93670124_93670283_93671646
tx.4972	chr16	+	1922	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_1	52.2487224157954	248	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4366	False	NA	NA	False	NA	NA	NA	93680788	93703003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
tx.4973	chr16	+	1080	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-600	1916	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	36.1693547388148	143	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2264	False	NA	NA	False	NA	NA	NA	93811699	93815011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572
tx.4974	chr16	+	1545	4	FSM	ENSMUSG00000022941.9	ENSMUST00000023660.9	1531	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	15	junction_3	1.63299316185545	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACAATCATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	94129264	94137794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_94129457_94130204_94130281_94134114_94134183_94136585
tx.4975	chr16	-	1148	4	FSM	ENSMUSG00000022940.18	ENSMUST00000138514.2	695	4	-199	-254	4	0	multi-exon	FALSE	canonical	3	395	junction_3	26.0298973404728	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	NA	NA	NA	94171567	94165310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947
tx.4976	chr16	-	809	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	152	5	-33	0	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	NA	NA	NA	94171401	94165310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
tx.4977	chr16	-	736	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	4	5	4	0	multi-exon	TRUE	canonical	3	162	junction_4	117.933243828871	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	NA	NA	NA	94171567	94165310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
tx.4978	chr16	-	754	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113905.8	758	5	4	0	4	0	multi-exon	FALSE	canonical	2	8	junction_4	183.830084589003	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	False	NA	NA	False	NA	NA	NA	94171870	94165305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171753
tx.4979	chr16	-	2154	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	387	6	-2	-6	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	277	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGGTTTGGACTGCA	NA	False	NA	NA	False	NA	NA	NA	94327302	94298647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
tx.498	chr1	+	418	3	FSM	ENSMUSG00000042751.15	ENSMUST00000190960.2	539	3	-12	133	-12	-133	multi-exon	FALSE	canonical	3	57	junction_2	72	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTGTGGCTTGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	152969213	152970210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_152969301_152969782_152969860_152969956
tx.4980	chr16	+	646	4	NNC	ENSMUSG00000116641.2	novel	1200	5	NA	NA	30375	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7.71722460186015	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACCATTATTTGTTTTT	910	False	NA	NA	False	NA	NA	NA	94553127	94554300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_+_94553339_94553485_94553564_94553805_94553999_94554136
tx.4981	chr16	+	448	2	Antisense	novelGene_ENSMUSG00000043301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTACTTCTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	94656116	94656878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_+_94656240_94656553
tx.4982	chr16	+	411	4	Antisense	novelGene_ENSMUSG00000043301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_3	6.94422221866655	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTGCATCACACAGT	NA	False	NA	NA	False	NA	NA	NA	94656104	94668288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr16_+_94656240_94659190_94659253_94667462_94667539_94668150
tx.4983	chr16	-	1000	7	FSM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	44	0	-26	0	multi-exon	FALSE	canonical	3	1101	junction_3	73.0062782688357	1120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	False	NA	-87	True	NA	NA	NA	95792116	95781132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
tx.4984	chr16	-	2253	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	129	0	31	0	multi-exon	TRUE	canonical	3	425	junction_4	11.1214882097676	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	NA	False	NA	NA	False	NA	NA	NA	95883597	95867867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
tx.4985	chr16	-	1205	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	-1	970	-1	646	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	7620	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	NA	False	NA	NA	NA	95928930	95922787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
tx.4986	chr16	+	700	3	ISM	ENSMUSG00000023147.18	ENSMUST00000233227.2	1101	4	-7	1450	-7	-858	5prime_fragment	FALSE	canonical	3	306	junction_2	22	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGCCTTTCTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	95946599	95954525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_95946779_95953012_95953179_95954170
tx.4987	chr16	+	2492	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-2	5	-2	1	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTACTGTGGAAAGCGT	NA	False	NA	NA	False	NA	NA	NA	95946604	95959047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
tx.4988	chr16	-	1621	8	NNC	ENSMUSG00000022938.9	novel	972	8	NA	NA	49	260	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	13.697906886135	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTTGATCACCTCACG	NA	False	NA	NA	False	NA	NA	NA	97313681	97271904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313178
tx.4989	chr16	-	1038	7	NIC	ENSMUSG00000022938.9	novel	806	8	NA	NA	-21	230	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	15.0268278607148	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTGGGGAATGAATGAG	NA	False	NA	NA	False	NA	NA	NA	97313751	97271934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97313657
tx.499	chr1	-	3276	6	ISM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	54217	7	-4596	-7	intron_retention	FALSE	canonical	3	102	junction_3	13.0598621738516	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGGCTGAGTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	153007576	152998508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395
tx.4990	chr16	-	1176	8	FSM	ENSMUSG00000022938.9	ENSMUST00000231414.2	806	8	-17	-353	-17	228	multi-exon	FALSE	canonical	3	14	junction_7	10.770329614269	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTGGGGAATGAATG	NA	False	NA	NA	False	NA	NA	NA	97313747	97271936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313657
tx.4991	chr16	-	1143	8	NNC	ENSMUSG00000022938.9	novel	972	8	NA	NA	38	222	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	13.0384048104053	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAATATCTTCTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	97313692	97271942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313629
tx.4992	chr16	-	3583	8	FSM	ENSMUSG00000005251.16	ENSMUST00000019386.10	3591	8	8	0	8	0	multi-exon	FALSE	canonical	3	41	junction_1	9.512612465478	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCAGACTATTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	97564979	97543132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97551343_97552693_97552843_97556267_97556560_97564727
tx.4993	chr16	+	1328	6	FSM	ENSMUSG00000080717.11	ENSMUST00000232308.2	669	6	-18	-641	1	0	multi-exon	FALSE	canonical	2	6	junction_4	50.8409283943557	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	NA	False	NA	NA	NA	97798515	97817956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318_97811369_97816865_97816920_97817041
tx.4994	chr16	+	556	5	FSM	ENSMUSG00000080717.11	ENSMUST00000232387.2	546	5	-8	-2	4	2	multi-exon	FALSE	canonical	3	19	junction_4	48.9508682251909	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTAGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	97798518	97832638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97832442
tx.4995	chr16	+	1270	5	FSM	ENSMUSG00000080717.11	ENSMUST00000231913.2	1230	5	-40	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	45.9292934846597	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	NA	False	NA	NA	NA	97798523	97817956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97817041
tx.4996	chr16	+	565	4	ISM	ENSMUSG00000080717.11	ENSMUST00000232308.2	669	6	-7	5730	0	385	5prime_fragment	FALSE	canonical	3	112	junction_3	8.80656320908194	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCCTATAAATGTAATC	NA	False	NA	NA	False	NA	NA	NA	97798526	97811585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318
tx.4997	chr16	-	5373	4	ISM	ENSMUSG00000116673.2	ENSMUST00000232614.2	497	5	1	9471	1	911	5prime_fragment	FALSE	canonical	3	34	junction_3	16.6599986661331	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGGATAGCAAAAGTATTC	NA	False	NA	NA	False	NA	NA	NA	97883209	97862800	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883089
tx.4998	chr17	-	1235	4	FSM	ENSMUSG00000116995.2	ENSMUST00000232087.2	1210	4	-10	-15	-10	15	multi-exon	FALSE	canonical	2	4	junction_1	2.62466929133727	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCATCCGGCCCTATCA	NA	False	NA	NA	False	NA	NA	NA	3165080	3162049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_3162848_3163562_3163623_3164462_3164621_3164861
tx.4999	chr17	-	1366	5	NNC	ENSMUSG00000116995.2	novel	1210	4	NA	NA	-48	16	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1.11803398874989	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCATCCGGCCCTATCAC	NA	False	NA	NA	False	NA	NA	NA	3165118	3162048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_3162848_3162936_3163029_3163562_3163623_3164462_3164621_3164861
tx.5	chr1	+	2584	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-33	-4	-33	0	multi-exon	TRUE	canonical	3	1526	junction_2	186.842443693696	557	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTTTGTCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	4928003	4968132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
tx.50	chr1	-	1048	4	NNC	ENSMUSG00000099343.2	novel	633	2	NA	NA	15112	61	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	33.7671766990109	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTACACGTTTCGTTGTT	NA	False	NA	NA	False	NA	NA	NA	21326705	21320521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_21321037_21323622_21323669_21324392_21324563_21326388
tx.500	chr1	-	545	2	FSM	ENSMUSG00000073538.11	ENSMUST00000186785.7	1964	2	0	1419	0	1	multi-exon	FALSE	canonical	3	87	junction_1	0	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGGGTGTGGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	153283536	153281991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_153282348_153283347
tx.5000	chr17	-	1413	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	9	-20	9	20	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	173	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCCCAAAGGACTGG	NA	False	NA	NA	False	NA	NA	NA	3608047	3569510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
tx.5001	chr17	-	1312	3	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGCTACCTGAAATCC	NA	False	NA	NA	False	NA	NA	NA	5103614	5097633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_-_5098700_5102907_5103034_5103494
tx.5002	chr17	-	962	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	-13	-1	0	1	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	482	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGCGTGTGTGTCTGT	3455	False	NA	NA	False	NA	NA	NA	5490531	5461143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
tx.5003	chr17	-	1919	2	Antisense	novelGene_ENSMUSG00000034265.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGGTGTTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	5577545	5572998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_-_5574721_5577348
tx.5004	chr17	+	3275	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	58	-2	35	2	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGATTCCCAAAGTATG	NA	False	NA	NA	False	NA	NA	NA	5891661	5982231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
tx.5005	chr17	-	2140	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	0	1867	0	3	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCATCTGTTGTTAAGG	2593	False	NA	NA	False	NA	NA	NA	6130016	6094337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
tx.5006	chr17	-	2030	16	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	-1	6	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	22.4376667434225	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTGTTGTTAAGGTCT	2592	False	NA	NA	False	NA	NA	NA	6130017	6094334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
tx.5007	chr17	-	1837	8	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	0	21778	0	975	5prime_fragment	FALSE	canonical	3	78	junction_3	11.8545608204141	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGGTGGCATATTTG	2593	False	NA	NA	False	NA	NA	NA	6130016	6114248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
tx.5008	chr17	+	795	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	49	1401	-2	-16	multi-exon	FALSE	canonical	3	932	junction_1	74.5	349	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTGGTTAAATTATC	1739	False	NA	NA	False	NA	NA	NA	6130109	6135391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_6130187_6131076_6131150_6134746
tx.5009	chr17	+	1885	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-5	2525	-5	25	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTGAGTCTGTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	6320739	6356064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
tx.501	chr1	-	555	2	NNC	ENSMUSG00000073538.11	novel	766	4	NA	NA	0	-7290	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTTGTCATCTACTC	NA	False	NA	NA	False	NA	NA	NA	153289979	153289282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_153289749_153289890
tx.5010	chr17	+	1782	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	237.645407790157	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	6320739	6358589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6358271
tx.5011	chr17	-	707	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	64	2550	-18	-2550	multi-exon	TRUE	canonical	3	2579	junction_4	2048.76394138027	107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6367711	6360818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
tx.5012	chr17	-	861	5	Fusion	ENSMUSG00000118494.2_ENSMUSG00000092074.3	novel	3321	5	NA	NA	70	-2550	multi-exon	FALSE	canonical	3	145	junction_4	3028.61844534765	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6371941	6360818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6371724
tx.5013	chr17	+	705	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	66	0	66	0	multi-exon	TRUE	canonical	3	3024	junction_1	2440.4692555941	1459	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6697576	6703695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
tx.5014	chr17	-	1094	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-15007	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	188	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	2348	False	NA	NA	False	NA	NA	NA	6744541	6723807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
tx.5015	chr17	+	710	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	100	1779	-21	351	multi-exon	TRUE	canonical	3	5304	junction_1	1714.27572169707	2242	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6869169	6875299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
tx.5016	chr17	-	710	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	61	0	-21	0	multi-exon	TRUE	canonical	3	5415	junction_4	1216.82506959711	468	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	6923238	6916336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
tx.5017	chr17	-	1526	3	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	41741	234	1778	-234	3prime_fragment	FALSE	canonical	3	975	junction_1	45.5	382	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	NA	False	NA	NA	NA	7008442	7005673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_7006867_7007028_7007281_7008361
tx.5018	chr17	-	2901	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	29	234	29	-234	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	235	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	NA	False	NA	NA	NA	7050154	7005673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
tx.5019	chr17	-	1973	8	FSM	ENSMUSG00000023806.11	ENSMUST00000231794.2	2243	8	-31	301	-31	2	multi-exon	TRUE	canonical	2	7	junction_1	24.1119836409624	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTTCAAGGGCCATGTT	NA	False	NA	NA	False	NA	NA	NA	7216112	7172112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
tx.502	chr1	-	4605	28	FSM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	9	2	0	-2	multi-exon	FALSE	canonical	3	83	junction_24	29.9642219210858	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	NA	False	NA	NA	NA	153363397	153331505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
tx.5020	chr17	+	992	9	FSM	ENSMUSG00000094724.9	ENSMUST00000089119.13	1783	9	283	508	-29	0	multi-exon	FALSE	canonical	0	0	junction_3	237.179784130098	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGCTTTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	7246276	7265589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
tx.5021	chr17	+	1563	8	FSM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	306	320	-36	0	multi-exon	TRUE	canonical	3	57	junction_4	7.41482244134913	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTTCATTTATTTAAC	NA	False	NA	NA	False	NA	NA	NA	8164790	8198336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
tx.5022	chr17	-	980	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	295	518	-17	-518	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	199	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGCTTTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	8366634	8347425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
tx.5023	chr17	+	3109	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	62	334	23	-5	multi-exon	FALSE	canonical	3	46	junction_7	116.477107908235	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATTTTACAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	8384394	8415302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
tx.5024	chr17	+	3059	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	20	-2	20	2	multi-exon	TRUE	canonical	3	299	junction_6	38.250587420542	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	8384391	8415309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
tx.5025	chr17	+	2378	6	ISM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	16813	-2	106	2	3prime_fragment	FALSE	canonical	3	323	junction_1	15.3362316101447	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	8401184	8415309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
tx.5026	chr17	+	930	4	NIC	ENSMUSG00000023861.18	novel	958	5	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	472.094858641307	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2146	False	NA	NA	False	NA	NA	NA	8502618	8516494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
tx.5027	chr17	+	993	5	FSM	ENSMUSG00000023861.18	ENSMUST00000124023.8	555	5	-47	-391	9	1	multi-exon	FALSE	canonical	3	18	junction_2	407.512576493045	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2164	False	NA	NA	False	NA	NA	NA	8502636	8516494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_8502794_8512246_8512328_8515366_8515464_8515655_8515789_8515969
tx.5028	chr17	+	1009	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	40	0	3	0	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2963	False	NA	NA	False	NA	NA	NA	8529973	8546274	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
tx.5029	chr17	+	2250	8	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-206	-5	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	9.95295054191449	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	NA	False	NA	NA	NA	8653048	8661323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
tx.503	chr1	-	723	6	ISM	ENSMUSG00000042699.12	ENSMUST00000188345.2	2346	19	0	13752	0	183	5prime_fragment	FALSE	canonical	3	83	junction_2	16.7403703662733	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGATCCAAGGAGAATA	NA	False	NA	NA	False	NA	NA	NA	153363397	153353839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
tx.5030	chr17	-	1901	7	ISM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	36405	5991	-42	501	3prime_fragment	FALSE	canonical	3	1001	junction_1	105.822834124882	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGAAACCCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	10501904	10427520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767
tx.5031	chr17	+	1819	9	NIC	ENSMUSG00000023827.9	novel	967	7	NA	NA	97	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	85.5599205235722	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	NA	False	NA	NA	NA	12337687	12438528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_12337728_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
tx.5032	chr17	+	1896	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	15	4	15	-4	multi-exon	FALSE	canonical	3	218	junction_3	26.473748790075	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	NA	False	NA	NA	NA	12338185	12438528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
tx.5034	chr17	-	1806	19	FSM	ENSMUSG00000073460.6	ENSMUST00000163394.3	2092	19	286	0	2	0	multi-exon	TRUE	canonical	3	109	junction_10	13.5984067694222	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2976	False	NA	NA	False	NA	NA	NA	13128831	13107615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
tx.5035	chr17	-	991	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	232	-4	-10	4	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	412	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTACTGTGTTGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	13135000	13130231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
tx.5036	chr17	+	1904	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	32	510	-25	1	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	4027	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGGGTTCCTGTCCTC	NA	False	NA	NA	False	NA	NA	NA	13135300	13143444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
tx.5037	chr17	-	2176	8	FSM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	27	-403	27	-2	multi-exon	FALSE	canonical	3	922	junction_2	94.6542580734146	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCTTGTCAGTGAG	NA	False	NA	NA	False	NA	NA	NA	13179231	13161926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881
tx.5038	chr17	-	2090	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	10	150	10	-2	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCTTGTCAGTGAG	NA	False	NA	NA	False	NA	NA	NA	13179624	13161926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
tx.5039	chr17	-	543	3	NNC	ENSMUSG00000023832.15	novel	2250	9	NA	NA	-7	-12140	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	491.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGCCTTGCTGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	13179641	13175429	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_13175692_13178881_13179017_13179495
tx.504	chr1	-	1409	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	329	-3	-5	3	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTAATCTTGTT	NA	False	NA	NA	False	NA	NA	NA	153425462	153378757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
tx.5040	chr17	-	1569	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	37	1581	37	-714	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTTTTTTTAATTCA	NA	False	NA	NA	False	NA	NA	NA	13211042	13193152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
tx.5041	chr17	+	959	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	122	4780	-57	-262	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	2438	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	NA	False	NA	NA	NA	13226825	13234241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
tx.5042	chr17	-	2798	10	NNC	ENSMUSG00000067049.9	novel	2643	10	NA	NA	-11897	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.99382239013587	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTACGTCTTGCCCAAAT	NA	False	NA	NA	False	NA	NA	NA	13362594	13327505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_13328741_13334386_13334519_13335065_13335202_13336506_13336725_13339647_13339774_13341630_13341861_13342156_13342339_13344453_13344599_13344823_13344878_13362254
tx.5043	chr17	+	1533	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	28	945	-18	5	multi-exon	FALSE	canonical	3	37	junction_1	0	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAGGTCATCGTTAAT	NA	False	NA	NA	False	NA	NA	NA	15163473	15165253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_15163582_15163828
tx.5044	chr17	+	1593	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	-13	943	-13	5	multi-exon	FALSE	canonical	3	15	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAGGTCATCGTTAAT	NA	False	NA	NA	False	NA	NA	NA	15163478	15165253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_15163582_15163763
tx.5045	chr17	-	671	5	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	8621	-8	54	8	3prime_fragment	FALSE	canonical	3	756	junction_1	59.9848939317225	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAACATCAAGTTGATT	NA	False	NA	NA	False	NA	NA	NA	15172914	15165262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881
tx.5046	chr17	-	1034	7	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	6344	-2	-2223	2	3prime_fragment	FALSE	canonical	3	756	junction_1	78.1039193781095	62	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGACCTTAAACATCAAG	NA	False	NA	NA	False	NA	NA	NA	15175191	15165268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053
tx.5047	chr17	+	1451	12	FSM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	393	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_7	75.6540626145262	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGCTCTGTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	15199122	15211167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
tx.5048	chr17	-	632	3	Antisense	novelGene_ENSMUSG00000036552.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTTTGGAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	15272792	15264399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_-_15264753_15271322_15271527_15272717
tx.5049	chr17	+	2532	18	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	59.4887678037601	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATGTTGCCTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	15261876	15284494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
tx.505	chr1	+	950	7	NIC	ENSMUSG00000042671.13	novel	5614	6	NA	NA	166	78	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.80277563773199	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGAGCTGATGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	153536992	153568809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_153537060_153541581_153541663_153543570_153543700_153546528_153546631_153547499_153547565_153566643_153566811_153568470
tx.5050	chr17	+	783	3	ISM	ENSMUSG00000036552.20	ENSMUST00000228803.2	1271	6	3209	7	506	0	3prime_fragment	FALSE	canonical	3	59	junction_2	18.5	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	NA	False	NA	NA	NA	15280221	15284485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_15280247_15281330_15281445_15283841
tx.5051	chr17	-	835	4	NNC	ENSMUSG00000097624.3	novel	1218	5	NA	NA	29	-4596	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	16.779617264871	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATCTCCGCTGCTCAT	NA	False	NA	NA	False	NA	NA	NA	15461016	15456442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_15456884_15457287_15457536_15460531_15460624_15460962
tx.5052	chr17	+	2682	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	55	29316	9	-4731	5prime_fragment	FALSE	canonical	3	53	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTTTTTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	15616518	15624384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_15616823_15622006
tx.5053	chr17	-	821	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	-1	938	-1	0	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	2438	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	NA	False	NA	NA	NA	15718561	15696220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
tx.5054	chr17	+	1805	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	30	10959	-4	-7	multi-exon	FALSE	canonical	3	150	junction_1	66.6565978791022	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATTGTTTTGTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	15720179	15737682	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
tx.5055	chr17	+	1853	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	29	9	5	-9	multi-exon	TRUE	canonical	3	123	junction_2	77.8728932299295	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCATTGTTTTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	15720178	15737680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
tx.5056	chr17	+	1994	9	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	-2	-14	intron_retention	FALSE	canonical	3	87	junction_2	86.7564839075443	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAGACCATTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	15720187	15737675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_15720287_15721415_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
tx.5057	chr17	-	784	5	ISM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	714	0	399	0	3prime_fragment	FALSE	canonical	3	811	junction_3	60.3298226418742	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGTACCTCATAATT	NA	False	NA	NA	False	NA	NA	NA	15746849	15741836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634
tx.5058	chr17	-	1439	10	NIC	ENSMUSG00000051977.17	novel	1447	11	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	3.23178657161089	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCATTTCTATAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	15784616	15773479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_15773808_15774949_15775018_15775348_15775621_15775827_15775930_15777562_15777720_15779284_15779335_15782676_15782785_15783075_15783200_15783482_15783594_15784497
tx.5059	chr17	+	2099	4	FSM	ENSMUSG00000060149.8	ENSMUST00000232328.2	1598	4	-16	-485	-3	5	multi-exon	FALSE	canonical	3	27	junction_1	5.55777733351102	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGCCTACTCGTTTT	NA	False	NA	NA	False	NA	NA	NA	17171797	17194424	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_17171971_17191161_17191289_17191432_17191494_17192686
tx.506	chr1	+	1635	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-3	2957	-3	455	multi-exon	TRUE	canonical	3	152	junction_7	29.3257565972304	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTGTGTCGGTCTAGCC	NA	False	NA	NA	False	NA	NA	NA	155034457	155078448	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
tx.5060	chr17	+	2717	4	FSM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	-50	0	-50	0	multi-exon	FALSE	canonical	3	176	junction_3	31.9826341768293	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17284324	17309890	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505
tx.5061	chr17	+	2729	4	FSM	ENSMUSG00000095990.2	ENSMUST00000147630.2	2684	4	-38	-7	-38	7	multi-exon	FALSE	canonical	3	169	junction_3	43.3615292883245	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17341638	17367100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720
tx.5062	chr17	+	2316	4	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	141	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCCAAGTATGCTGCTC	NA	False	NA	NA	False	NA	NA	NA	17399556	17426650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
tx.5063	chr17	+	2478	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	-7	-277	-7	277	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCCAAGTATGCTGCTC	6217	False	NA	NA	False	NA	NA	NA	17455126	17486602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
tx.5064	chr17	+	2228	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	-17	-1685	-17	278	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATCCCCAAGTATGC	NA	False	NA	NA	False	NA	NA	NA	17514687	17540051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
tx.5065	chr17	+	2039	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	250	931	-13	-931	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	338	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATCTGTAGTTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	17594820	17614230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
tx.5066	chr17	+	1606	8	FSM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	-7	-3	-7	3	multi-exon	FALSE	canonical	3	346	junction_3	41.8120185826896	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTGTCTTTTGAATTA	NA	False	NA	NA	False	NA	NA	NA	17594826	17608019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
tx.5067	chr17	+	2287	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	112	11	-64	0	multi-exon	FALSE	canonical	3	1213	junction_1	77.3781135010385	610	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTCTCTAGTCTTAGT	NA	False	NA	NA	False	NA	NA	NA	21165684	21186167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
tx.5068	chr17	+	2047	5	NIC	ENSMUSG00000067942.7	novel	2087	6	NA	NA	15	3	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	20.5836707124847	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACATAAGTTCTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	21229179	21263309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21261684
tx.5069	chr17	+	2578	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	0	-4	0	4	multi-exon	FALSE	canonical	3	80	junction_1	22.3271135617661	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTCTCTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	21670635	21685853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
tx.507	chr1	+	1117	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	378	4097	374	138	multi-exon	TRUE	canonical	3	134	junction_7	98.5478232605254	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGACGTCTCAGCAACTC	NA	False	NA	NA	False	NA	NA	NA	155434245	155562979	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
tx.5070	chr17	+	802	5	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	-10	-2211	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	24.0572234474388	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTGTCTGAACAGTAAT	1465	False	NA	NA	False	NA	NA	NA	21709249	21727815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21727601
tx.5071	chr17	+	2403	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-14	676	-14	33	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATTATAACTGTGG	1461	False	NA	NA	False	NA	NA	NA	21709245	21730059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
tx.5072	chr17	+	3477	6	FSM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-75	807	-75	-807	multi-exon	FALSE	canonical	3	33	junction_5	11.689311356962	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21926647	21943810	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940968
tx.5073	chr17	+	1226	6	NIC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-115	436	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	67.9923525111464	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTTCCTGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	21949660	21988759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21988273
tx.5074	chr17	-	3688	5	FSM	ENSMUSG00000069743.6	ENSMUST00000084141.6	3686	5	3	-5	3	5	multi-exon	TRUE	canonical	3	21	junction_3	11.3880419739304	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAACTTGGTTGTGCTCA	NA	False	NA	NA	False	NA	NA	NA	22064737	22035860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624
tx.5075	chr17	-	3212	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	22.8508205541945	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181455	22145943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172962_22181236
tx.5076	chr17	-	3294	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	-29	0	-16	0	multi-exon	TRUE	canonical	3	43	junction_3	17.9041894538681	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181461	22145940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
tx.5077	chr17	-	3205	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	26.7776025812618	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181426	22145943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22173035_22181236
tx.5078	chr17	-	3143	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-5	-3	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_3	29.5607848339654	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181437	22145943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22172962_22181236
tx.5079	chr17	+	2676	4	FSM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	62	3	28	-3	multi-exon	TRUE	canonical	3	11	junction_3	5.73488351136175	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181594	22213344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_22181801_22207011_22207083_22209759_22209887_22211072
tx.508	chr1	+	589	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	404	0	398	0	multi-exon	FALSE	canonical	3	223	junction_3	63.2525800966956	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	155434269	155448034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
tx.5080	chr17	-	2715	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	161	-4	161	4	multi-exon	FALSE	canonical	3	22	junction_1	1.11803398874989	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTCCATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22385010	22363335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
tx.5081	chr17	-	3474	6	FSM	ENSMUSG00000117284.2	ENSMUST00000233465.2	3474	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_5	14.9853261559434	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533818	22504851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217_22532302_22533727
tx.5082	chr17	-	2714	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	20.2484567313166	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGGTTGTTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	22580381	22556966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578420_22578506_22580148
tx.5083	chr17	-	2768	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	35.1946965701747	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580384	22556969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22574061_22574116_22577803_22577897_22578420_22578506_22580148
tx.5084	chr17	-	933	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	-12	1863	-12	-1863	multi-exon	FALSE	canonical	3	51	junction_4	24.8997991959775	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTATCATTGGTC	NA	False	NA	NA	False	NA	NA	NA	22580393	22558832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
tx.5085	chr17	+	978	7	FSM	ENSMUSG00000071266.14	ENSMUST00000120222.8	2926	7	-57	2005	-20	-1154	multi-exon	FALSE	canonical	3	27	junction_4	20.6881608655772	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTGTTCTATCATT	NA	False	NA	NA	False	NA	NA	NA	22643182	22673665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22672432_22672560_22673404
tx.5086	chr17	+	3029	8	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	32.3803921520164	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGTTGTTTTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	22643202	22675670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22670684_22670751_22672432_22672560_22673404
tx.5087	chr17	+	3073	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13406	1034	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	3.26917420765551	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATCAGTTTTTAGTGGA	NA	False	NA	NA	False	NA	NA	NA	22893294	22910475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_22893506_22905293_22905368_22906456_22906513_22906703_22906831_22907870
tx.5088	chr17	-	2670	6	FSM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	16	0	16	0	multi-exon	FALSE	canonical	3	33	junction_4	6.49923072370877	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCTTTAGCTGGC	6700	False	NA	NA	False	NA	NA	NA	23783196	23775740	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782942
tx.5089	chr17	-	2111	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-7	0	-7	0	multi-exon	TRUE	canonical	3	79	junction_1	5.98665181883831	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4816	False	NA	NA	False	NA	NA	NA	23805213	23794817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
tx.509	chr1	+	596	5	ISM	ENSMUSG00000033701.14	ENSMUST00000194476.2	691	8	38336	-138	34205	138	3prime_fragment	FALSE	canonical	3	134	junction_4	8.55496931613434	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGACGTCTCAGCAACTC	NA	False	NA	NA	False	NA	NA	NA	155477198	155562979	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
tx.5090	chr17	+	2699	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	6	-7	0	0	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	885	False	NA	NA	False	NA	NA	NA	23819835	23829993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
tx.5091	chr17	-	1511	13	FSM	ENSMUSG00000041319.15	ENSMUST00000047436.11	1504	13	-7	0	-7	0	multi-exon	TRUE	canonical	3	423	junction_10	38.5186643070603	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	787	False	NA	NA	False	NA	NA	NA	23892823	23887591	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
tx.5092	chr17	-	1434	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	16	0	5	0	multi-exon	FALSE	canonical	3	160	junction_13	93.5049281997111	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	770	False	NA	NA	False	NA	NA	NA	23892840	23887591	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
tx.5093	chr17	+	873	4	NNC	ENSMUSG00000023904.11	novel	693	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	42	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	23892564	23894201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
tx.5094	chr17	+	601	3	ISM	ENSMUSG00000023904.11	ENSMUST00000179928.2	597	4	314	-53	314	0	3prime_fragment	FALSE	canonical	3	343	junction_1	29	347	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	23892914	23894201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_23893043_23893520_23893650_23893857
tx.5095	chr17	-	991	4	FSM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	66	junction_1	6.34209919681348	62	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGCCTGATCCCTAAC	NA	False	NA	NA	False	NA	NA	NA	23896449	23894418	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_23895021_23895112_23895248_23895492_23895598_23896300
tx.5096	chr17	+	1535	2	FSM	ENSMUSG00000023906.4	ENSMUST00000233364.2	1078	2	24	-481	24	1	multi-exon	FALSE	canonical	3	11	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGTCTGATGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	23898656	23901417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_23898796_23900021
tx.5097	chr17	+	1956	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	89	-5	-44	0	multi-exon	TRUE	canonical	3	384	junction_2	52.6761379583211	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3027	False	NA	NA	False	NA	NA	NA	23945398	23955709	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
tx.5098	chr17	+	1537	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_3	138.628412436607	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3045	False	NA	NA	False	NA	NA	NA	23945416	23955709	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
tx.5099	chr17	+	1099	6	ISM	ENSMUSG00000023908.9	ENSMUST00000233954.2	2902	7	7506	-8	-752	0	3prime_fragment	FALSE	canonical	3	419	junction_1	49.6765538257235	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	23952948	23955709	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
tx.51	chr1	-	498	3	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	32	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGAGATCTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	21326239	21323504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_21323669_21324392_21324598_21326110
tx.510	chr1	-	2468	13	FSM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	-31	-4	14	0	multi-exon	FALSE	canonical	3	21	junction_7	5.99247212944893	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTTGACTTGATCC	NA	False	NA	NA	False	NA	NA	NA	155688621	155653903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
tx.5100	chr17	+	1869	4	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-746	0	intron_retention	FALSE	canonical	3	451	junction_3	45.4386032649185	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	23952954	23955709	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_23954347_23954536_23954695_23955297_23955376_23955468
tx.5101	chr17	+	784	5	ISM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	20	14720	-14	10	5prime_fragment	FALSE	canonical	3	209	junction_1	15.9275704361965	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAAGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	24022180	24028990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942
tx.5102	chr17	-	532	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	1	4	1	-2	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	2582	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGCATTTCTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	24048109	24043715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
tx.5103	chr17	-	546	5	FSM	ENSMUSG00000055839.7	ENSMUST00000233593.2	578	5	-37	69	1	0	multi-exon	FALSE	canonical	3	73	junction_2	5034.57517448096	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	24048109	24043782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24043954_24045559_24045641_24046441_24046548_24047817_24047953_24048056
tx.5104	chr17	-	1845	5	FSM	ENSMUSG00000024114.16	ENSMUST00000151797.3	1799	5	3	-49	3	49	multi-exon	FALSE	canonical	3	18	junction_2	4.71036092035419	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGCACATGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	24063143	24059976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24061500_24062415_24062585_24062812_24062846_24062930_24062958_24063050
tx.5105	chr17	-	1707	2	ISM	ENSMUSG00000024114.16	ENSMUST00000151797.3	1799	5	445	53	422	-53	3prime_fragment	FALSE	canonical	3	22	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGCTTCGTTCACATA	NA	False	NA	NA	False	NA	NA	NA	24062701	24060078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_24061500_24062415
tx.5106	chr17	-	1899	3	ISM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	15685	-2	2517	2	3prime_fragment	FALSE	canonical	3	997	junction_1	73.5	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAACTGTGAATATCTT	NA	False	NA	NA	False	NA	NA	NA	24276774	24266705	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_24268419_24274898_24275025_24276714
tx.5107	chr17	-	2036	4	ISM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	14170	-9	1002	9	3prime_fragment	FALSE	canonical	3	983	junction_3	72.8209371601938	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAATATCTTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	24278289	24266698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195
tx.5108	chr17	-	1955	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	19	5187	0	14	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACCCAACCACACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	24360550	24297840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
tx.5109	chr17	-	1465	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	31	0	-5	0	multi-exon	TRUE	canonical	3	306	junction_8	20.5156038175824	232	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	NA	False	NA	NA	NA	24382709	24374806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
tx.511	chr1	-	1600	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	467	2167	90	0	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAATTATCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	155911706	155882526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
tx.5110	chr17	-	1161	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	23	-1	23	1	multi-exon	FALSE	canonical	3	1416	junction_2	838.5	1217	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGTGTTCTGGCGCT	NA	False	NA	NA	False	NA	NA	NA	24388412	24382838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24383583_24383672_24383857_24388179
tx.5111	chr17	-	1745	9	NIC	ENSMUSG00000024118.15	novel	2166	10	NA	NA	18	0	intron_retention	FALSE	canonical	3	24	junction_6	68.678599286823	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCGGGCAGTGGTGGTGC	3355	False	NA	NA	False	NA	NA	NA	24439746	24434027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24439225_24439285_24439490_24439590_24439664
tx.5112	chr17	-	2275	9	FSM	ENSMUSG00000024118.15	ENSMUST00000137648.8	2160	9	70	-185	9	0	multi-exon	FALSE	canonical	3	185	junction_8	21.2485293608758	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCGGGCAGTGGTGGTGC	3346	False	NA	NA	False	NA	NA	NA	24439755	24434027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
tx.5113	chr17	-	2150	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	9	7	9	-7	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAAGTACCGGGCAGTG	3346	False	NA	NA	False	NA	NA	NA	24439755	24434034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
tx.5114	chr17	-	3134	17	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-10	-1032	combination_of_known_junctions	FALSE	canonical	3	43	junction_16	200.408917902872	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8756	False	NA	NA	False	NA	NA	NA	24470302	24442203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470154
tx.5115	chr17	-	3079	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	22	1032	22	-1032	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8697	False	NA	NA	False	NA	NA	NA	24470361	24442203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
tx.5116	chr17	+	1039	5	ISM	ENSMUSG00000024130.17	ENSMUST00000136295.2	3139	11	-53	17000	3	-1166	5prime_fragment	FALSE	canonical	3	9	junction_1	7.72576857018122	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATAGTCAGTCCCTAC	NA	False	NA	NA	False	NA	NA	NA	24571022	24585318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_24571226_24579861_24580064_24583450_24583561_24583666_24583932_24585059
tx.5117	chr17	+	1923	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	0	-3	0	0	multi-exon	FALSE	canonical	3	410	junction_1	446.592917963328	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	913	False	NA	NA	False	NA	NA	NA	24633648	24644872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
tx.5118	chr17	+	1801	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	12	3	0	0	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	200	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	913	False	NA	NA	False	NA	NA	NA	24633648	24644872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
tx.5119	chr17	+	1091	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	42	4	0	-4	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTCTTAGCTCTTGT	4882	False	NA	NA	False	NA	NA	NA	24645656	24658290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
tx.512	chr1	-	1737	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	439	547	9	0	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAATTATCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	155911787	155882526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
tx.5120	chr17	+	1051	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	79	1497	36	-1249	multi-exon	FALSE	canonical	3	1130	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTACCTAAATTAATAG	NA	False	NA	NA	False	NA	NA	NA	24689444	24690587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24690124_24690215
tx.5121	chr17	-	1590	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	22	1746	-1	3	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	9609	False	NA	NA	False	NA	NA	NA	24698030	24694272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
tx.5122	chr17	-	2628	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_19	98.6916789805503	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	24746808	24727823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738087_24738221_24746739
tx.5123	chr17	-	2628	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_18	68.0276414408143	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	24746822	24727823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
tx.5124	chr17	-	2674	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_17	98.1200667549712	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	24746834	24727823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735571_24737715_24737774_24738104_24738221_24746739
tx.5125	chr17	-	2580	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_20	104.924675362853	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	24746814	24727823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746776
tx.5126	chr17	+	295	2	FSM	ENSMUSG00000093565.2	ENSMUST00000176921.2	298	2	3	0	3	0	multi-exon	TRUE	canonical	3	77	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCAGACGTTGTG	4767	False	NA	NA	False	NA	NA	NA	24747224	24747718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24747411_24747609
tx.5127	chr17	-	1399	9	FSM	ENSMUSG00000079657.11	ENSMUST00000035797.16	1575	9	166	10	4	1	multi-exon	FALSE	canonical	3	65	junction_8	7.78520230951001	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCATCTGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	24752696	24748037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24748618_24748714_24748792_24748887_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
tx.5128	chr17	-	1518	8	NIC	ENSMUSG00000079657.11	novel	1575	9	NA	NA	-19	1	intron_retention	FALSE	canonical	3	65	junction_7	8.15412753876019	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCATCTGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	24752719	24748037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_24748618_24748714_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
tx.5129	chr17	+	991	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234635.2	893	6	-39	-59	0	1	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	906	False	NA	NA	False	NA	NA	NA	24851653	24857812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24851738_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
tx.513	chr1	+	2678	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	155911456	155929276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_155911838_155916820_155916881_155927039
tx.5130	chr17	+	1075	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	5	-1	5	1	multi-exon	FALSE	canonical	3	194	junction_2	26.3772629360971	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	913	False	NA	NA	False	NA	NA	NA	24851660	24857812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
tx.5131	chr17	+	904	5	NIC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	98.3142283700584	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	913	False	NA	NA	False	NA	NA	NA	24851660	24857812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_24851829_24852900_24853140_24854561_24854722_24857397_24857504_24857581
tx.5132	chr17	-	1269	2	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	4231	0	4198	0	3prime_fragment	FALSE	canonical	3	161	junction_1	0	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGCCTGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	24859733	24858259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_24859364_24859568
tx.5134	chr17	-	674	3	FSM	ENSMUSG00000040888.11	ENSMUST00000234235.2	682	3	-3	11	0	-11	multi-exon	FALSE	canonical	3	24	junction_2	299	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTTTCTGTAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	24915067	24913169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24913417_24914227_24914392_24914804
tx.5135	chr17	-	712	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	58	1006	-5	-11	multi-exon	FALSE	canonical	3	527	junction_2	47.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTTTCTGTAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	24915072	24913169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24913417_24914227_24914425_24914804
tx.5136	chr17	-	2499	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	25	2702	-4	-193	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCTCATGTGAATC	NA	False	NA	NA	False	NA	NA	NA	24926609	24919624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
tx.5137	chr17	-	120	2	FSM	ENSMUSG00000090101.2	ENSMUST00000161706.2	183	2	63	0	63	0	multi-exon	FALSE	canonical	3	215	junction_1	0	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATCGTATGTTGGTGTTT	4364	False	NA	NA	False	NA	NA	NA	24938876	24938504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24938582_24938833
tx.5138	chr17	+	951	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	46	1	-1	0	multi-exon	FALSE	canonical	3	3280	junction_1	2855.80020309545	3803	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6236	False	NA	NA	False	NA	NA	NA	24939082	24940899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
tx.5139	chr17	-	675	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	57	0	-1	0	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	562	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	NA	NA	NA	24943395	24941033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
tx.514	chr1	+	2435	2	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	155911468	155929276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_155911667_155927039
tx.5141	chr17	+	877	5	FSM	ENSMUSG00000075705.14	ENSMUST00000115262.9	886	5	7	2	7	-2	multi-exon	FALSE	canonical	3	96	junction_4	30.3685692781204	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGTGTTTGTTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	24955622	24961750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879_24960912_24961283
tx.5142	chr17	+	1253	4	FSM	ENSMUSG00000075705.14	ENSMUST00000101800.7	1211	4	-37	-5	3	-2	multi-exon	FALSE	canonical	3	148	junction_3	11.8602979164381	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGTGTTTGTTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	24955618	24961750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879
tx.5143	chr17	+	1151	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	40	0	40	0	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	False	NA	NA	False	NA	NA	NA	25069503	25083424	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
tx.5144	chr17	+	2258	2	FSM	ENSMUSG00000046070.10	ENSMUST00000050714.8	2625	2	368	-1	-131	1	multi-exon	FALSE	canonical	3	22	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGACCTAGAGTGTGA	8143	False	NA	NA	False	NA	NA	NA	25097599	25100985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25097799_25098926
tx.5145	chr17	-	1413	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	9	5	0	0	multi-exon	TRUE	canonical	3	605	junction_4	56.4111888034831	245	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	25105313	25101590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
tx.5146	chr17	+	1595	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	46	0	9	0	multi-exon	FALSE	canonical	3	99	junction_1	37.7388688519174	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	25105662	25111123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
tx.5147	chr17	+	1851	7	FSM	ENSMUSG00000024160.17	ENSMUST00000120943.8	1949	7	98	0	19	0	multi-exon	FALSE	canonical	3	47	junction_1	56.1921307262463	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	25105751	25111123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
tx.5148	chr17	-	1505	8	FSM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	23	-7	-2	7	multi-exon	TRUE	canonical	3	24	junction_1	4.68606270481621	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAAGGCTCTTTTA	1887	False	NA	NA	False	NA	NA	NA	25114038	25111118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
tx.5149	chr17	+	893	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	25	0	6	0	multi-exon	FALSE	canonical	3	645	junction_1	12	211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	NA	False	NA	NA	NA	25114114	25115263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25114463_25114635_25114679_25114761
tx.515	chr1	+	2493	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	-1	-1	-1	1	multi-exon	FALSE	canonical	3	72	junction_1	87	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	155911470	155929276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_155911667_155916820_155916881_155927039
tx.5150	chr17	+	703	5	FSM	ENSMUSG00000073435.11	ENSMUST00000024978.7	715	5	-6	18	-6	-18	multi-exon	FALSE	canonical	3	182	junction_1	9.82344135219425	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGCTGGTGAAGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	25115467	25116478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001_25116115_25116187
tx.5151	chr17	-	2947	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	42	-317	-2	317	multi-exon	TRUE	canonical	3	1697	junction_3	70.6872513258225	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCCTGTGTGTATTTTG	4815	False	NA	NA	False	NA	NA	NA	25179621	25161126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
tx.5152	chr17	-	1531	3	FSM	ENSMUSG00000024165.10	ENSMUST00000233316.2	1705	3	-9	183	0	-183	multi-exon	FALSE	canonical	3	1697	junction_1	67.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTTTAACCAAGCT	4817	False	NA	NA	False	NA	NA	NA	25179619	25166450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25167755_25174991_25175141_25179541
tx.5153	chr17	+	888	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	16	2126	16	-2126	multi-exon	FALSE	canonical	3	314	junction_1	0	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATTTTCTCACCTCCCC	NA	False	NA	NA	False	NA	NA	NA	25403543	25404510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25403615_25403693
tx.5154	chr17	-	1278	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-20	-24	-12	24	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCATCTGGGTTAAGAAG	NA	False	NA	NA	False	NA	NA	NA	25459110	25453266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
tx.5155	chr17	+	1172	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	21	-1	21	1	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGCTTTGTACGTGGC	4624	False	NA	NA	False	NA	NA	NA	25459164	25461773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
tx.5156	chr17	-	1131	7	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGCATTATCATCAT	4521	False	NA	NA	False	NA	NA	NA	25492583	25480886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
tx.5157	chr17	-	1298	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	-5	-7	-5	2	multi-exon	FALSE	canonical	3	84	junction_7	2152.45295286232	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGCATTATCATCA	4742	False	NA	NA	False	NA	NA	NA	25492362	25480887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
tx.5158	chr17	-	1091	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	123	-390	-28	0	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	578	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATTATCAT	4719	False	NA	NA	False	NA	NA	NA	25492385	25480889	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
tx.5159	chr17	-	1136	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	2	0	2	0	multi-exon	TRUE	canonical	3	77	junction_6	1792.78505404301	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATTATCAT	3822	False	NA	NA	False	NA	NA	NA	25493282	25480889	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
tx.516	chr1	+	2411	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-28	206	-1	1	multi-exon	FALSE	canonical	3	163	junction_1	41.5	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	155916634	155929276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_155916749_155916820_155916881_155927039
tx.5160	chr17	+	1323	2	FSM	ENSMUSG00000091475.5	ENSMUST00000163493.4	1802	2	459	20	10	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTCTGTCCTGCA	3191	False	NA	NA	False	NA	NA	NA	25789790	25793997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25790076_25792959
tx.5161	chr17	+	1748	10	NNC	ENSMUSG00000002279.20	novel	1858	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	39.1949858219166	65	1	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTACCTATACTGT	NA	False	NA	NA	False	NA	NA	NA	25798150	25881697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
tx.5162	chr17	+	344	3	FSM	ENSMUSG00000025739.14	ENSMUST00000172002.8	719	3	53	322	53	-3	multi-exon	FALSE	canonical	2	6	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTTTAGTCCATT	NA	False	NA	NA	False	NA	NA	NA	25936197	25938058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25936252_25937640_25937773_25937900
tx.5163	chr17	-	1903	14	ISM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	3348	102	-3161	2	3prime_fragment	FALSE	canonical	3	655	junction_12	52.1427262935632	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGCACTTGGCCTTC	9031	False	NA	NA	False	NA	NA	NA	25943036	25938001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976
tx.5164	chr17	-	3103	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	9	102	0	2	multi-exon	FALSE	canonical	3	337	junction_21	100.708127696462	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGCACTTGGCCTTC	5683	False	NA	NA	False	NA	NA	NA	25946384	25938001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
tx.5165	chr17	-	1352	9	ISM	ENSMUSG00000019214.15	ENSMUST00000168914.2	3812	19	4602	11	-1863	5	3prime_fragment	FALSE	canonical	3	681	junction_4	46.6898008134539	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCTCATAGGATGGT	3188	False	NA	NA	False	NA	NA	NA	25941738	25938014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619
tx.5166	chr17	-	3393	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-6	-179	3	179	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTCTACCTCCTTCTTC	5677	False	NA	NA	False	NA	NA	NA	25946390	25937720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
tx.5167	chr17	-	1671	7	FSM	ENSMUSG00000019214.15	ENSMUST00000237158.2	1613	7	-58	0	-4	0	multi-exon	FALSE	canonical	3	337	junction_6	169.684756730434	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCTTGGCAGGGCCC	5679	False	NA	NA	False	NA	NA	NA	25946388	25943754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
tx.5168	chr17	-	1674	7	ISM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-5	5856	4	-1	5prime_fragment	FALSE	canonical	3	468	junction_6	122.465868260871	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGGCTTGGCAGGGCC	5678	False	NA	NA	False	NA	NA	NA	25946389	25943755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
tx.5169	chr17	+	1747	6	FSM	ENSMUSG00000041199.4	ENSMUST00000047273.3	1745	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	41	junction_1	16.0299719276111	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	NA	False	NA	NA	NA	25946688	25950438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25946822_25947176_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
tx.517	chr1	+	2350	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-27	206	0	1	multi-exon	FALSE	canonical	3	145	junction_1	0	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	155916635	155929276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_155916749_155927039
tx.5170	chr17	+	1536	5	FSM	ENSMUSG00000041199.4	ENSMUST00000235645.2	1531	5	5	-10	5	0	multi-exon	FALSE	canonical	3	21	junction_1	24.712092181764	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	NA	False	NA	NA	NA	25946710	25950438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25946822_25947496_25947621_25947799_25947903_25948041_25948144_25949342
tx.5171	chr17	-	299	2	ISM	ENSMUSG00000063011.8	ENSMUST00000075884.8	2114	16	5333	0	927	0	3prime_fragment	FALSE	canonical	3	51	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	4131	False	NA	NA	False	NA	NA	NA	25967955	25967586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_25967805_25967874
tx.5172	chr17	-	2083	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	-39	0	-39	0	multi-exon	TRUE	canonical	3	34	junction_13	11.5648646230728	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTCCTGTAGTGTTCC	6552	False	NA	NA	False	NA	NA	NA	25973391	25967588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
tx.5173	chr17	+	664	3	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTACATGTGTCCCATC	NA	False	NA	NA	False	NA	NA	NA	25975568	25977644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_+_25975749_25976240_25976421_25977340
tx.5174	chr17	+	2016	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	24	515	-4	21	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGCCTTTCAAAGTTT	6944	False	NA	NA	False	NA	NA	NA	25992773	26001791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
tx.5175	chr17	+	1720	9	ISM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	3283	534	240	2	3prime_fragment	FALSE	canonical	3	237	junction_6	20.2977831301844	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTACCAC	NA	False	NA	NA	False	NA	NA	NA	25996032	26001772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
tx.5176	chr17	-	1117	8	FSM	ENSMUSG00000061046.10	ENSMUST00000138759.8	1074	8	-7	-36	-7	2	multi-exon	FALSE	canonical	3	7	junction_7	17.2496672549984	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAGGTCTGTTTATTAG	4352	False	NA	NA	False	NA	NA	NA	26004548	26001760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004401
tx.5177	chr17	-	1296	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	96	13	5	0	multi-exon	FALSE	canonical	3	40	junction_4	8.07387763097757	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATCCTTCCAGAGGTGC	4349	False	NA	NA	False	NA	NA	NA	26004551	26001775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
tx.5178	chr17	-	898	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	418	5	7	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7185796180472	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8385	False	NA	NA	False	NA	NA	NA	26011354	26009479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
tx.5179	chr17	-	1372	3	FSM	ENSMUSG00000057411.10	ENSMUST00000236842.2	1886	3	508	6	2	0	multi-exon	FALSE	canonical	3	227	junction_2	3.5	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8372	False	NA	NA	False	NA	NA	NA	26011367	26009479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26009753_26009906_26009958_26010319
tx.518	chr1	+	2629	2	Genic_Genomic	ENSMUSG00000101523.3	novel	2633	1	NA	NA	-8	42	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGACTAGACAGTGAGAA	NA	False	NA	NA	False	NA	NA	NA	156351573	156354256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr1_+_156351693_156351746
tx.5180	chr17	+	2060	9	FSM	ENSMUSG00000025736.16	ENSMUST00000026832.14	2091	9	15	16	-6	-16	multi-exon	FALSE	canonical	3	70	junction_1	9.19238815542512	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGAATGCAGCTCACTC	NA	False	NA	NA	False	NA	NA	NA	26048031	26050800	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
tx.5181	chr17	-	1257	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	417	129	-3	0	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	499	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	6762	False	NA	NA	False	NA	NA	NA	26051918	26049607	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
tx.5182	chr17	-	2863	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	326	0	0	0	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTGTTTTTGTGT	6013	False	NA	NA	False	NA	NA	NA	26063499	26057430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
tx.5183	chr17	-	833	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	9	0	9	0	multi-exon	FALSE	canonical	3	256	junction_1	22.6770809408971	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7771	False	NA	NA	False	NA	NA	NA	26087729	26082671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
tx.5184	chr17	+	809	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	426	8	0	1	multi-exon	FALSE	canonical	3	287	junction_5	67.7542618585724	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGCTTGCTGGGAATA	7194	False	NA	NA	False	NA	NA	NA	26094473	26096135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
tx.5185	chr17	+	1017	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	2	7	2	2	multi-exon	FALSE	canonical	3	348	junction_1	48.8287824955732	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCTTGCTGGGAATAC	7197	False	NA	NA	False	NA	NA	NA	26094476	26096136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
tx.5186	chr17	-	2437	7	FSM	ENSMUSG00000025730.15	ENSMUST00000026826.14	2466	7	29	0	5	0	multi-exon	FALSE	canonical	3	152	junction_6	27.4104602904317	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	NA	False	NA	NA	NA	26138659	26101087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
tx.5189	chr17	-	3073	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	94	6	-19	0	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	26160928	26145400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
tx.519	chr1	-	1865	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	18	1402	-3	4	multi-exon	FALSE	canonical	3	42	junction_5	7.96492310069595	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTCTTACTGAGACCTG	NA	False	NA	NA	False	NA	NA	NA	156501908	156482588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
tx.5190	chr17	-	2149	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	56	19	-6	0	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	NA	False	NA	NA	NA	26309255	26300203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
tx.5191	chr17	-	929	6	FSM	ENSMUSG00000024177.10	ENSMUST00000236547.2	926	6	-1	-2	-1	0	multi-exon	FALSE	canonical	3	25	junction_1	147.011019995101	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	26314448	26310707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26311127_26311480_26311532_26312590_26312704_26312832_26312935_26313110_26313245_26314338
tx.5192	chr17	-	881	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	125	0	-4	0	multi-exon	FALSE	canonical	3	296	junction_2	23.847169643377	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	26314451	26310707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
tx.5193	chr17	-	990	2	FSM	ENSMUSG00000024177.10	ENSMUST00000150280.3	995	2	3	2	3	-2	multi-exon	FALSE	canonical	3	319	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTTGAGAAGTGGGAAT	NA	False	NA	NA	False	NA	NA	NA	26314456	26312372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26313245_26314338
tx.5194	chr17	+	1035	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	33	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	609	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	26342506	26345587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
tx.5195	chr17	+	1011	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	671.536670629386	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	26342508	26345587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
tx.5196	chr17	-	869	6	FSM	ENSMUSG00000073433.12	ENSMUST00000025019.9	1032	6	167	-4	-39	4	multi-exon	TRUE	canonical	3	81	junction_2	6.72309452558864	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGCTTCTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	26420157	26418152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
tx.5197	chr17	-	2813	13	FSM	ENSMUSG00000024187.16	ENSMUST00000114988.8	3714	13	24	877	15	-8	multi-exon	FALSE	canonical	3	154	junction_12	26.8089951736767	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1943	False	NA	NA	False	NA	NA	NA	26463173	26431672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
tx.5198	chr17	-	2849	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	-5	-11	3	-8	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1923	False	NA	NA	False	NA	NA	NA	26463193	26431672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
tx.5199	chr17	-	2812	13	NIC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	16	-8	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	63.7958440826847	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1944	False	NA	NA	False	NA	NA	NA	26463172	26431672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462963
tx.52	chr1	-	370	2	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTGTGAGATCTTTGT	1138	False	NA	NA	False	NA	NA	NA	21324600	21323506	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_21323669_21324392
tx.520	chr1	-	3010	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-70	7	1	-1	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAACCTTTTCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	156767171	156635692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
tx.5200	chr17	+	1430	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-29	3533	26	3	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTGGGGTATCTGCT	NA	False	NA	NA	False	NA	NA	NA	26471895	26500945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
tx.5201	chr17	+	1745	10	FSM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	-76	3	27	0	multi-exon	FALSE	canonical	3	95	junction_2	196.74976273379	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	NA	False	NA	NA	NA	26471896	26499694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
tx.5202	chr17	+	1668	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	33	-1	-22	0	multi-exon	FALSE	canonical	3	393	junction_1	74.6521098161331	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	NA	False	NA	NA	NA	26471902	26499694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
tx.5203	chr17	+	2725	9	FSM	ENSMUSG00000024188.17	ENSMUST00000133032.8	2670	9	-55	0	-22	0	multi-exon	FALSE	canonical	3	162	junction_1	146.829354609356	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	NA	False	NA	NA	NA	26471902	26499694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
tx.5204	chr17	+	2716	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	41	-3	12	0	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTGACTCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	26780503	26875908	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
tx.5205	chr17	+	1265	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACGTGTCTCTTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	26780499	26874326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
tx.5206	chr17	+	781	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	42	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_3	173.829418300432	622	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	26895385	26918621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
tx.5207	chr17	+	1659	4	ISM	ENSMUSG00000048249.15	ENSMUST00000062519.14	7462	9	-1	33382	-1	294	5prime_fragment	FALSE	canonical	3	21	junction_1	1.88561808316413	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTGGATCAAAAGTAG	1279	False	NA	NA	False	NA	NA	NA	26934622	26962227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015
tx.5208	chr17	+	1096	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	2	0	2	0	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGGTAAATGCTTAAC	1996	False	NA	NA	False	NA	NA	NA	27000041	27011495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
tx.5209	chr17	+	2323	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	14	294	14	-294	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTTAATCTTAGAT	NA	False	NA	NA	False	NA	NA	NA	27136078	27151263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
tx.521	chr1	-	2926	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-63	1374	2	-12	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATTGAAAATATAAAACC	NA	False	NA	NA	False	NA	NA	NA	156767176	156635703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
tx.5210	chr17	-	851	5	ISM	ENSMUSG00000024194.17	ENSMUST00000236623.2	622	6	18	-126	18	0	intron_retention	FALSE	canonical	3	797	junction_3	67.913547985656	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9448	False	NA	NA	False	NA	NA	NA	27158347	27156945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857
tx.5211	chr17	-	701	6	ISM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	122	0	1	0	3prime_fragment	FALSE	canonical	3	511	junction_5	169.834507683215	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9374	False	NA	NA	False	NA	NA	NA	27158421	27156945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290
tx.5212	chr17	-	655	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	86	0	-19	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	215	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9338	False	NA	NA	False	NA	NA	NA	27158457	27156945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
tx.5213	chr17	-	610	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	53	-1	-26	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9331	False	NA	NA	False	NA	NA	NA	27158464	27156945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
tx.5214	chr17	+	2777	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	15	4	15	-4	multi-exon	FALSE	canonical	3	46	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTAGACTGGCTTGA	NA	False	NA	NA	False	NA	NA	NA	27192155	27195173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_27192289_27192529
tx.5215	chr17	+	413	2	FSM	ENSMUSG00000048731.16	ENSMUST00000142141.3	451	2	38	0	12	0	multi-exon	FALSE	canonical	3	59	junction_1	0	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTAGCGCCGGTTAATA	NA	False	NA	NA	False	NA	NA	NA	27236998	27241491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_27237145_27241224
tx.5216	chr17	-	1971	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	414	2	-8	0	multi-exon	TRUE	canonical	3	126	junction_3	5.45527267879434	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCGCCTGGCATCTTTA	NA	False	NA	NA	False	NA	NA	NA	27247569	27238785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
tx.5217	chr17	-	481	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	14	5	0	0	multi-exon	TRUE	canonical	3	2713	junction_1	153.559977424675	891	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	1961	False	NA	NA	False	NA	NA	NA	27352876	27341641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
tx.5218	chr17	-	2161	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	-6	-6	-6	6	multi-exon	TRUE	canonical	3	72	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACTTGGGTTTTTTTG	6243	False	NA	NA	False	NA	NA	NA	27461639	27454042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_27456112_27461547
tx.5219	chr17	-	739	3	NNC	ENSMUSG00000117916.2	novel	2149	2	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	34.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGACTTGGGTTTTTT	6250	False	NA	NA	False	NA	NA	NA	27461632	27454044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_27454490_27455902_27456112_27461547
tx.522	chr1	-	1737	12	ISM	ENSMUSG00000026594.15	ENSMUST00000190648.7	2498	15	0	9607	0	14	5prime_fragment	FALSE	canonical	3	193	junction_3	27.825311029426	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAGAAAAGAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	156767163	156656053	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
tx.5220	chr17	+	1598	5	FSM	ENSMUSG00000046711.17	ENSMUST00000114888.11	1631	5	36	-3	6	1	multi-exon	FALSE	canonical	3	2165	junction_2	1373.00680533638	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	NA	NA	NA	27775594	27782645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781411
tx.5221	chr17	+	1631	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	47	3	6	1	multi-exon	FALSE	canonical	3	3635	junction_2	873.596123789477	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	NA	NA	NA	27775594	27782645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
tx.5222	chr17	+	1638	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	38	-646	-1	1	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	NA	NA	NA	27775625	27782645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
tx.5223	chr17	-	636	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	30	196	0	0	multi-exon	FALSE	canonical	3	219	junction_4	17.0934929139717	109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCCTCCTTGGGTGGAC	NA	False	NA	NA	False	NA	NA	NA	27784700	27782742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
tx.5224	chr17	-	1694	3	FSM	ENSMUSG00000024213.15	ENSMUST00000133048.8	443	3	62	-1313	62	-5	multi-exon	FALSE	canonical	3	348	junction_1	5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCTTTTGCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	27802231	27798365	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_27799929_27800981_27801067_27802185
tx.5225	chr17	-	579	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	304	4	-1	0	multi-exon	FALSE	canonical	3	4719	junction_5	828.025700084243	10360	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACTTGTGTATGTTCT	NA	False	NA	NA	False	NA	NA	NA	27854215	27849395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
tx.5226	chr17	+	1446	8	ISM	ENSMUSG00000040276.16	ENSMUST00000097360.3	1800	10	17484	-31	-1776	-2	3prime_fragment	TRUE	canonical	3	26	junction_1	11.2866184086307	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGCGTTTGCAGCCTA	NA	False	NA	NA	False	NA	NA	NA	27921654	27927664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
tx.5227	chr17	+	889	5	ISM	ENSMUSG00000040276.16	ENSMUST00000231350.2	1368	8	1449	2	257	-2	3prime_fragment	FALSE	canonical	3	43	junction_3	6.05702071979286	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGCGTTTGCAGCCTA	NA	False	NA	NA	False	NA	NA	NA	27924879	27927664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
tx.5228	chr17	+	749	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	12	-3	12	0	multi-exon	FALSE	canonical	3	1664	junction_1	167.935225607971	1106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTCCCTGTCCCTTGCA	NA	False	NA	NA	False	NA	NA	NA	28059072	28070942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
tx.5229	chr17	-	1245	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	-23	-2	-12	0	multi-exon	FALSE	canonical	3	141	junction_3	9.9373034571759	145	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGGGTTTCTCTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	28126721	28120099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
tx.523	chr1	+	812	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	381	1	93	-1	multi-exon	FALSE	canonical	3	989	junction_1	26.5	696	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGGCCCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	157240302	157247805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_157240696_157241313_157241366_157247438
tx.5230	chr17	-	1709	10	FSM	ENSMUSG00000062859.16	ENSMUST00000043925.16	1743	10	34	0	-2	0	multi-exon	FALSE	canonical	3	11	junction_9	14.4743280617618	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGACGGCCATTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	28299579	28285724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28299132_28299280_28299548
tx.5231	chr17	-	1964	10	FSM	ENSMUSG00000062859.16	ENSMUST00000129046.9	1948	10	-20	4	16	0	multi-exon	FALSE	canonical	3	11	junction_9	12.0349285902676	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGACGGCCATTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	28299597	28285724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298895_28299280_28299548
tx.5232	chr17	+	2245	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	27	5	2	-5	multi-exon	FALSE	canonical	3	110	junction_2	14.7461859475595	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTCCTGCCCTTCCCT	NA	False	NA	NA	False	NA	NA	NA	28426778	28447577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
tx.5233	chr17	+	950	6	FSM	ENSMUSG00000037805.16	ENSMUST00000129935.8	949	6	-1	0	0	0	multi-exon	FALSE	canonical	3	728	junction_3	2914.49848859113	421	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	NA	False	NA	NA	NA	28547556	28550006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28548497_28549498_28549672_28549803
tx.5234	chr17	-	2890	7	NNC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	204.007080487146	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCATGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	28637488	28618067	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637414
tx.5235	chr17	-	2083	2	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCAGTGTTGTCGCTCTTTC	7611	False	NA	NA	False	NA	NA	NA	28762664	28760150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_-_28760443_28760873
tx.5236	chr17	-	1378	6	ISM	ENSMUSG00000004865.17	ENSMUST00000004987.17	2007	12	7368	0	1062	0	3prime_fragment	FALSE	canonical	3	554	junction_1	56.7753467624813	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	NA	False	NA	NA	NA	28818798	28808563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444
tx.5237	chr17	-	2468	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	243	1942	-15	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	NA	False	NA	NA	NA	28841440	28808563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
tx.5238	chr17	-	1076	10	ISM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	0	12585	0	103	5prime_fragment	FALSE	canonical	3	656	junction_9	88.918328458212	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGCAGCAGTGACTTGA	NA	False	NA	NA	False	NA	NA	NA	28841461	28819206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
tx.5239	chr17	+	1387	12	FSM	ENSMUSG00000004864.14	ENSMUST00000233984.2	2937	12	20	1530	-19	199	multi-exon	FALSE	canonical	3	65	junction_6	12.7227264607489	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGCCCCTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	28988290	28997677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995157_28995275_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
tx.524	chr1	+	1625	10	FSM	ENSMUSG00000033488.12	ENSMUST00000046743.11	1618	10	-5	-2	-2	2	multi-exon	FALSE	canonical	3	36	junction_7	9.08125188520113	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	157286144	157316632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
tx.5240	chr17	+	1474	11	NIC	ENSMUSG00000004864.14	novel	2937	12	NA	NA	-4	193	intron_retention	FALSE	canonical	3	77	junction_10	10.3580886267689	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCAGCTCAATGCCCCTT	NA	False	NA	NA	False	NA	NA	NA	28988316	28997671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
tx.5241	chr17	+	2375	2	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15729	1815	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29004334	29027097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_29004515_29024902
tx.5242	chr17	+	2225	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	30	1598	0	14	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGTGTGCTCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	29171425	29186925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
tx.5243	chr17	+	3997	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	199	0	-3	0	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	NA	NA	NA	29171430	29188523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
tx.5244	chr17	-	3298	14	FSM	ENSMUSG00000024006.18	ENSMUST00000119274.3	3354	14	51	5	1	-5	multi-exon	FALSE	canonical	3	151	junction_13	173.563487011723	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAACTGTGGTGGATTTCT	NA	False	NA	NA	False	NA	NA	NA	29226918	29189858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
tx.5245	chr17	-	3304	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	42	5	-2	-5	multi-exon	FALSE	canonical	3	678	junction_3	53.1740471465247	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAACTGTGGTGGATTTCT	NA	False	NA	NA	False	NA	NA	NA	29226927	29189858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
tx.5246	chr17	+	1465	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	1108	0	22	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	7303	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTTGCCATTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	29251646	29261239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
tx.5247	chr17	+	1198	3	FSM	ENSMUSG00000117007.2	ENSMUST00000233006.2	1125	3	-63	-10	-63	0	multi-exon	FALSE	canonical	1	3	junction_1	3.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCAGACTGGTAAGCAAA	1546	False	NA	NA	False	NA	NA	NA	29275770	29278729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29275960_29276834_29276933_29277818
tx.5248	chr17	+	1434	3	NNC	ENSMUSG00000117007.2	novel	1247	3	NA	NA	306	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCAGACTGGTAAGCAAA	1915	False	NA	NA	False	NA	NA	NA	29276139	29278729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_29276565_29276834_29276933_29277818
tx.5249	chr17	-	1476	2	FSM	ENSMUSG00000085912.3	ENSMUST00000133221.3	3218	2	118	1624	118	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGTAGCTCCATCATTGC	NA	False	NA	NA	False	NA	NA	NA	29298035	29278027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_29279333_29297864
tx.525	chr1	+	869	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	29	2101	29	249	multi-exon	FALSE	canonical	3	2655	junction_1	51	823	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCATCTTTTAAATT	NA	False	NA	NA	False	NA	NA	NA	160022813	160027639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_160022882_160024515_160024675_160026997
tx.5250	chr17	-	706	2	FSM	ENSMUSG00000085912.3	ENSMUST00000233478.2	1437	2	-46	777	2	-363	multi-exon	FALSE	canonical	1	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATAGTACTTCCTACTA	NA	False	NA	NA	False	NA	NA	NA	29291819	29278801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_29279333_29291644
tx.5251	chr17	+	1938	3	FSM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	5	-1021	5	0	multi-exon	FALSE	canonical	3	83	junction_1	538	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	1862	False	NA	NA	False	NA	NA	NA	29309957	29319696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29310076_29317370_29317812_29318317
tx.5252	chr17	+	1910	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	3	0	3	0	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	1033	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4650	False	NA	NA	False	NA	NA	NA	29312745	29319696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29312836_29317370_29317812_29318317
tx.5253	chr17	-	2454	14	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-5014	6	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_8	10.3443664455472	32	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCCCTCTCCTTTGAA	3110	False	NA	NA	False	NA	NA	NA	29408091	29376883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29408003
tx.5254	chr17	-	1210	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	227	25	-11	0	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	856	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGTCTAGTATTGTT	9916	False	NA	NA	False	NA	NA	NA	29482933	29469801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
tx.5255	chr17	+	1311	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	136	1365	-1	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	447	False	NA	NA	False	NA	NA	NA	29487897	29520499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
tx.5256	chr17	-	952	5	FSM	ENSMUSG00000024012.19	ENSMUST00000235118.2	1867	5	915	0	915	0	multi-exon	FALSE	canonical	3	492	junction_4	304.221444839117	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	29555197	29551049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140
tx.5257	chr17	+	1631	2	FSM	ENSMUSG00000024014.9	ENSMUST00000234270.2	867	2	383	-1147	383	-1	multi-exon	FALSE	canonical	3	1879	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTTTCCATTCAT	NA	False	NA	NA	False	NA	NA	NA	29712763	29715085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29712873_29713563
tx.5258	chr17	+	1969	9	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	-1	-22088	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	44.8857925740428	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATATGTATTTATGTATA	NA	False	NA	NA	False	NA	NA	NA	29768763	29803780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29802942
tx.5259	chr17	+	1995	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	74	3335	0	7	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	179	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTGGGCTTCGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	29833837	29860630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
tx.526	chr1	-	1501	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	43	554	-27	-554	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	1546	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCTGCAATCTGTT	7339	False	NA	NA	False	NA	NA	NA	160040402	160030490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
tx.5260	chr17	+	3737	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	25	2618	-1	2	multi-exon	TRUE	canonical	3	368	junction_15	33.7979652859003	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	29879593	29922335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
tx.5261	chr17	-	429	4	FSM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	27	941	2	140	multi-exon	FALSE	canonical	3	251	junction_3	23.9072281027215	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTCCTGCTGACAAGGT	NA	False	NA	NA	False	NA	NA	NA	29935991	29923246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_29923444_29924244_29924298_29924462_29924558_29935907
tx.5262	chr17	+	2596	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	439	4	18	-2	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGGATTGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	30224145	30428992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
tx.5263	chr17	+	628	3	ISM	ENSMUSG00000044477.13	ENSMUST00000234902.2	2289	4	17113	1609	17113	-8	3prime_fragment	FALSE	canonical	3	114	junction_2	3.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGCATGGCTAGTG	NA	False	NA	NA	False	NA	NA	NA	30372276	30427385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_30372343_30411536_30411705_30426991
tx.5264	chr17	-	2252	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	247	4559	18	16	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	30795215	30439056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
tx.5265	chr17	-	1299	6	FSM	ENSMUSG00000062202.15	ENSMUST00000236910.2	1375	6	-3	79	0	-79	multi-exon	FALSE	canonical	3	100	junction_1	4.24264068711928	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGCTCACCGTAACTCA	NA	False	NA	NA	False	NA	NA	NA	30795236	30732528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
tx.5266	chr17	-	1768	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	35	8062	-12	-131	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	998	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCCTGCCTGCTGCAG	NA	False	NA	NA	False	NA	NA	NA	30831598	30811971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
tx.5267	chr17	-	1168	9	FSM	ENSMUSG00000024033.11	ENSMUST00000024832.9	1191	9	23	0	-22	0	multi-exon	FALSE	canonical	3	52	junction_8	7.5	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCTGATGTCGCTTC	NA	False	NA	NA	False	NA	NA	NA	31496334	31473992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31492498_31492613_31496175
tx.5268	chr17	+	404	3	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-52	-596	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	69	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGATCTTCCAACACA	NA	False	NA	NA	False	NA	NA	NA	31515125	31526335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_31515230_31519263_31519482_31526253
tx.5269	chr17	+	997	3	ISM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	6	43364	6	-594	5prime_fragment	FALSE	canonical	3	118	junction_1	22.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATCTTCCAACACAGG	NA	False	NA	NA	False	NA	NA	NA	31515194	31526337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_31515890_31519263_31519482_31526253
tx.527	chr1	+	460	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	99	-2	0	0	multi-exon	TRUE	canonical	3	3085	junction_7	1053.46856146731	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	NA	False	NA	NA	NA	160862735	160866109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
tx.5270	chr17	+	3365	20	FSM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	6	18	6	14	multi-exon	TRUE	canonical	3	70	junction_8	17.4641698891444	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	NA	NA	NA	31515194	31569683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
tx.5271	chr17	+	1930	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	8	151	8	0	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	31605191	31695133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
tx.5272	chr17	+	2042	19	FSM	ENSMUSG00000041119.13	ENSMUST00000127929.8	1891	19	0	-151	0	0	multi-exon	FALSE	canonical	3	20	junction_18	14.1770114735436	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGTGTGCATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	31605227	31695284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694901
tx.5273	chr17	-	1916	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	448	1790	6	10	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAGCAGCAGCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	31731277	31715085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
tx.5274	chr17	-	1936	11	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	142.866686109814	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGAATGTTCAGCAGC	NA	False	NA	NA	False	NA	NA	NA	31731245	31715094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728742_31728887_31729551_31729621_31731140
tx.5275	chr17	+	462	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	26	5	-9	0	multi-exon	FALSE	canonical	3	3604	junction_2	48.5	953	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTATGTGGTTATTTC	NA	False	NA	NA	False	NA	NA	NA	31739114	31750300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_31739236_31740542_31740667_31750083
tx.5276	chr17	+	4199	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	36	17	11	-17	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATGCCTTGTGGACGA	NA	False	NA	NA	False	NA	NA	NA	31783743	31826650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
tx.5277	chr17	-	1248	7	ISM	ENSMUSG00000024039.16	ENSMUST00000235180.2	1826	9	1868	-3	1868	-1	3prime_fragment	FALSE	canonical	3	223	junction_1	32.736320298205	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	9596	False	NA	NA	False	NA	NA	NA	31839988	31831615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902
tx.5278	chr17	-	2458	17	FSM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	20	3748	-14	-1	multi-exon	FALSE	canonical	3	120	junction_2	62.6156118212543	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1931	False	NA	NA	False	NA	NA	NA	31856153	31831615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
tx.5279	chr17	-	2417	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	-15	1	-15	-1	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1930	False	NA	NA	False	NA	NA	NA	31856154	31831615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
tx.528	chr1	-	2717	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	5	897	3	1	multi-exon	TRUE	canonical	3	321	junction_5	41.9044672439586	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTTCCTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	160898223	160869067	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
tx.5280	chr17	-	889	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	157	0	3	0	multi-exon	FALSE	canonical	3	4626	junction_6	706.208473585007	831	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	NA	False	NA	NA	NA	31877709	31866054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
tx.5281	chr17	-	889	8	FSM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	34	0	3	0	multi-exon	FALSE	canonical	3	1007	junction_5	2353.82216310201	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	NA	False	NA	NA	NA	31877709	31866054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
tx.5282	chr17	+	899	2	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCTTTTTTAAATTCA	NA	False	NA	NA	False	NA	NA	NA	32028288	32029449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_+_32028451_32028712
tx.5283	chr17	-	3410	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	47	1064	36	-1064	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTTGTATACATTTTT	NA	False	NA	NA	False	NA	NA	NA	32074731	32064287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
tx.5284	chr17	-	1471	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	8	0	8	0	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	32253503	32165055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
tx.5285	chr17	-	1578	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-24	1313	5	0	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	512	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	32253506	32165055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
tx.5286	chr17	+	1768	12	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-2	155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	202.128140356475	43	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAACTATGAAGC	NA	False	NA	NA	False	NA	NA	NA	32255381	32276160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529
tx.5287	chr17	+	2303	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-2	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	181.227236431199	58	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTTTTTAATTACTTTA	NA	False	NA	NA	False	NA	NA	NA	32255381	32279581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
tx.5288	chr17	-	1609	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	46	-64	-40	64	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTCAATTTAAATGTTAA	1040	False	NA	NA	False	NA	NA	NA	32408477	32403569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
tx.5289	chr17	-	1085	5	ISM	ENSMUSG00000024002.19	ENSMUST00000237692.2	1823	9	61985	57	-21140	-10	3prime_fragment	FALSE	canonical	3	240	junction_4	12.0623380818148	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGAAGTGGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	32441122	32432593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846
tx.5290	chr17	-	2312	11	ISM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	4065	1020	-730	0	3prime_fragment	TRUE	canonical	3	426	junction_6	73.0521046924728	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	32536094	32523665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040
tx.5291	chr17	-	2685	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	26	1020	0	0	multi-exon	FALSE	canonical	3	426	junction_6	74.0811964579343	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	32540133	32523665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
tx.5292	chr17	-	1987	15	FSM	ENSMUSG00000002625.11	ENSMUST00000236503.2	1987	15	1	-1	1	0	multi-exon	TRUE	canonical	3	144	junction_11	68.7455007804221	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	NA	False	NA	NA	NA	32569568	32540397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
tx.5293	chr17	-	2089	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	13	0	1	0	multi-exon	FALSE	canonical	3	272	junction_6	38.0609912279546	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	NA	False	NA	NA	NA	32569568	32540397	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
tx.5294	chr17	+	1932	8	ISM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	13535	-792	3746	-3	3prime_fragment	FALSE	canonical	3	49	junction_7	8.14912039825809	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACAATTTGTGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	32700970	32712245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
tx.5295	chr17	+	793	7	ISM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	14	6843	-3	529	5prime_fragment	FALSE	canonical	3	71	junction_3	12.7725834852973	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCGTTGACTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	32755556	32763928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856
tx.5296	chr17	+	2232	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	-5	0	-5	0	multi-exon	TRUE	canonical	3	62	junction_12	10.7625895273086	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	32755537	32770771	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
tx.5297	chr17	+	812	7	ISM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	9	6844	-2	529	5prime_fragment	FALSE	canonical	3	41	junction_1	19.5505043981536	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCGTTGACTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	32755540	32763928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856
tx.5298	chr17	-	3485	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	33	7333	-4	423	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTAGTATTTATGTG	NA	False	NA	NA	False	NA	NA	NA	33007228	32991802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
tx.5299	chr17	-	2252	4	FSM	ENSMUSG00000055202.12	ENSMUST00000200914.5	3536	4	-36	1320	-36	410	multi-exon	FALSE	canonical	3	5	junction_3	3.09120616516523	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGCCTAATTGATGA	4448	False	NA	NA	False	NA	NA	NA	33028941	33015969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33017848_33019360_33019422_33019785_33019913_33028755
tx.53	chr1	+	1081	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3279	197	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	18.4867520132661	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATTCGAACATTGTCAT	NA	False	NA	NA	False	NA	NA	NA	21327023	21335442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
tx.5300	chr17	-	2862	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	3	3147	3	2228	multi-exon	FALSE	canonical	3	24	junction_2	7.93025150224688	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGGGGTGAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	33049232	33037569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33040074_33040751_33040813_33041047_33041175_33049062
tx.5301	chr17	-	2541	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	16	2780	16	1863	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCCTTTGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	33110600	33100972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
tx.5302	chr17	-	1750	13	FSM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	2	0	2	0	multi-exon	FALSE	canonical	2	129	junction_12	13.5285192587117	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	NA	False	NA	NA	NA	33166374	33143661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
tx.5303	chr17	-	795	4	NIC	ENSMUSG00000024295.10	novel	897	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	1.24721912892465	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGATATTCATTGTTA	NA	False	NA	NA	False	NA	NA	NA	33184698	33174970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_33175278_33176622_33176849_33179548_33179752_33184639
tx.5304	chr17	+	2205	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	-3	174	-3	-174	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTATAAGGTCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	33184784	33198033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
tx.5305	chr17	-	3423	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	-4	-12	-4	12	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTTTGTGTATGTGT	2755	False	NA	NA	False	NA	NA	NA	33252380	33235824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
tx.5306	chr17	+	1898	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	17	-1157	17	1157	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGGAGCAAGAGAGTAT	NA	False	NA	NA	False	NA	NA	NA	33311448	33325189	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
tx.5307	chr17	+	3214	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	2	2572	2	502	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTCGATCCTAGAATCT	NA	False	NA	NA	False	NA	NA	NA	33508519	33523643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
tx.5308	chr17	-	3275	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	6	-622	6	622	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATATTGTGTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	33613609	33598606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
tx.5309	chr17	+	1041	3	FSM	ENSMUSG00000024299.18	ENSMUST00000234715.2	2533	3	-1	1493	0	-1493	multi-exon	FALSE	canonical	3	35	junction_2	2	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCTTTTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	33743182	33748457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_33743233_33747257_33747445_33747653
tx.5310	chr17	+	1326	7	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	18478	2	2940	0	3prime_fragment	FALSE	canonical	3	43	junction_3	8.43932593411478	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAAGTAAATTACTGAG	2204	False	NA	NA	False	NA	NA	NA	33820054	33826736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
tx.5311	chr17	+	1232	4	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	19605	2	4067	0	3prime_fragment	FALSE	canonical	3	62	junction_3	1.69967317119759	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAAGTAAATTACTGAG	3331	False	NA	NA	False	NA	NA	NA	33821181	33826736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_33821584_33823230_33823427_33823523_33823694_33826272
tx.5312	chr17	+	1132	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	2	63	2	0	multi-exon	FALSE	canonical	3	354	junction_1	31.6569107779012	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTACCTATGCCTTC	4919	False	NA	NA	False	NA	NA	NA	33848065	33850690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
tx.5313	chr17	-	2349	16	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	491.668786436108	1297	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5756	False	NA	NA	False	NA	NA	NA	33904377	33865209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
tx.5314	chr17	-	1822	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	172	4115	-52	151	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCAGCTTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	33979332	33965572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
tx.5315	chr17	+	928	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	-6	3	-6	-3	multi-exon	FALSE	canonical	3	20	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTCTCTGATTTCATT	3471	False	NA	NA	False	NA	NA	NA	33978959	33980841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_33979562_33980515
tx.5316	chr17	-	1871	7	FSM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	287	1150	0	8	multi-exon	FALSE	canonical	3	124	junction_1	6.14862224856557	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTCTGTTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	34000517	33993873	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
tx.5317	chr17	+	784	6	FSM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	63	junction_2	124.071592236096	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	NA	False	NA	NA	NA	34029495	34041891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34029540_34035159_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
tx.5318	chr17	+	2239	8	ISM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	7265	-3	-119	0	intron_retention	FALSE	canonical	3	265	junction_4	40.1237880483254	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	4400	False	NA	NA	False	NA	NA	NA	34036761	34041891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259
tx.5319	chr17	+	1887	9	ISM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	7318	-3	-66	0	3prime_fragment	FALSE	canonical	3	265	junction_4	41.1868835310466	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	4453	False	NA	NA	False	NA	NA	NA	34036814	34041891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
tx.5320	chr17	-	315	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	67	0	-1	0	multi-exon	FALSE	canonical	3	11527	junction_1	4307.03060897722	6222	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	NA	False	NA	NA	NA	34043469	34042023	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
tx.5321	chr17	+	489	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	31	8	-1	0	multi-exon	FALSE	canonical	3	7458	junction_2	513.174650798558	1331	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4105	False	NA	NA	False	NA	NA	NA	34043576	34057283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
tx.5322	chr17	+	1176	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	12	1021	0	0	multi-exon	FALSE	canonical	3	326	junction_3	13.0072095393286	373	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7005	False	NA	NA	False	NA	NA	NA	34062076	34067727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
tx.5323	chr17	-	2322	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	28	7	0	2	multi-exon	FALSE	canonical	1	168	junction_4	135.039586788467	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCTTGTTTGTTTTG	9721	False	NA	NA	False	NA	NA	NA	34109607	34094639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
tx.5324	chr17	+	870	3	NNC	ENSMUSG00000092349.2	novel	807	3	NA	NA	-11919	4	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_1	2.5	101	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTGACTTAAATTTCT	NA	False	NA	NA	False	NA	NA	NA	34112189	34125653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_34112309_34124501_34124892_34125292
tx.5325	chr17	+	681	2	ISM	ENSMUSG00000092349.2	ENSMUST00000172817.2	807	3	463	-4	463	4	3prime_fragment	FALSE	canonical	3	123	junction_1	0	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTGACTTAAATTTCT	1722	False	NA	NA	False	NA	NA	NA	34124571	34125653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_34124892_34125292
tx.5326	chr17	-	584	2	FSM	ENSMUSG00000092564.3	ENSMUST00000174321.2	430	2	-43	-111	-43	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATATTCCCTTTTAC	1072	False	NA	NA	False	NA	NA	NA	34128334	34127156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34127561_34128154
tx.5327	chr17	+	2514	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	67	0	14	0	multi-exon	FALSE	canonical	3	546	junction_5	66.597787546753	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5636	False	NA	NA	False	NA	NA	NA	34128485	34134564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
tx.5328	chr17	+	1029	4	ISM	ENSMUSG00000002307.17	ENSMUST00000170075.9	2673	8	3100	-8	12	0	3prime_fragment	FALSE	canonical	3	546	junction_1	91.8706820602864	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	8825	False	NA	NA	False	NA	NA	NA	34131674	34134564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_34131782_34132246_34132701_34132816_34133037_34134316
tx.5329	chr17	+	2606	2	FSM	ENSMUSG00000051390.11	ENSMUST00000053429.11	2612	2	6	0	6	0	multi-exon	FALSE	canonical	3	107	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCAACACCCCT	NA	False	NA	NA	False	NA	NA	NA	34135150	34138299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34135248_34135790
tx.5330	chr17	+	2606	8	FSM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	292	0	-13	0	multi-exon	FALSE	canonical	3	116	junction_6	36.6951033823983	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGCCTCTCATTCTCCC	584	False	NA	NA	False	NA	NA	NA	34138597	34148266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
tx.5331	chr17	+	2614	8	FSM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	-26	1	-26	-1	multi-exon	FALSE	canonical	3	105	junction_6	40.4101421902563	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	571	False	NA	NA	False	NA	NA	NA	34138584	34148264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
tx.5332	chr17	+	2943	18	FSM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	309	0	-13	0	multi-exon	FALSE	canonical	3	51	junction_2	23.5177912481234	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3543	False	NA	NA	False	NA	NA	NA	34148864	34156661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
tx.5333	chr17	+	2747	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6331294599435	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	4568	False	NA	NA	False	NA	NA	NA	34149889	34156661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
tx.5334	chr17	+	1858	12	ISM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	3549	0	-794	0	3prime_fragment	FALSE	canonical	3	99	junction_2	12.8930758532895	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	6783	False	NA	NA	False	NA	NA	NA	34152104	34156661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
tx.5335	chr17	+	834	3	ISM	ENSMUSG00000041354.17	ENSMUST00000173284.2	943	8	2013	-463	550	0	3prime_fragment	FALSE	canonical	3	116	junction_2	4	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	1709	False	NA	NA	False	NA	NA	NA	34154911	34156661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_34155008_34155836_34155952_34156038
tx.5336	chr17	-	697	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	12	98	0	0	multi-exon	FALSE	canonical	3	1067	junction_1	64.8194072447099	721	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTTTACAGCCAGTCT	NA	False	NA	NA	False	NA	NA	NA	34159305	34157892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
tx.5337	chr17	+	2210	15	FSM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	17	2	17	-2	multi-exon	FALSE	canonical	3	240	junction_8	25.4498305996527	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTCTGGACCATCCTG	1996	False	NA	NA	False	NA	NA	NA	34159650	34168669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
tx.5338	chr17	-	546	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	14	0	0	0	multi-exon	FALSE	canonical	3	20050	junction_4	1387.25833481007	3028	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	34174637	34170972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
tx.5339	chr17	+	2740	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	103	540	0	522	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCCTCTCCTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	34174888	34185469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
tx.5340	chr17	-	1486	6	NNC	ENSMUSG00000067203.9	novel	1052	6	NA	NA	9	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.338094023943	12	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCACTATGCTGTGT	3653	False	NA	NA	False	NA	NA	NA	34197792	34193612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_34194054_34194455_34194588_34194714_34194990_34196744_34197021_34197227_34197498_34197700
tx.5341	chr17	-	1563	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	5	2	-1	-1	multi-exon	FALSE	canonical	3	30	junction_6	28.0698836361489	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTATGCTGTGTGTATC	NA	False	NA	NA	False	NA	NA	NA	34219258	34214992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
tx.5342	chr17	-	1043	6	ISM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	986	-33	-34	-2	3prime_fragment	FALSE	canonical	3	56	junction_1	21.2452347598232	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTATGCTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	34218335	34214993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244
tx.5343	chr17	-	1585	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	63	-29	-1	0	multi-exon	FALSE	canonical	3	30	junction_6	28.3196045170126	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	34219258	34214997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
tx.5344	chr17	-	544	2	ISM	ENSMUSG00000024325.9	ENSMUST00000174054.2	2552	3	2106	0	2106	0	3prime_fragment	FALSE	canonical	3	86	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34240800	34240057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_34240458_34240656
tx.5345	chr17	-	1717	7	FSM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	25	292	-3	0	multi-exon	FALSE	canonical	3	63	junction_3	8.5764535535124	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34243629	34240057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
tx.5346	chr17	-	2385	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-68	3	-6	1	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	34250662	34247245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
tx.5347	chr17	-	1666	7	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	218.983763984659	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	34250667	34247245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250521
tx.5348	chr17	+	2324	10	FSM	ENSMUSG00000039656.18	ENSMUST00000116612.3	2283	10	-47	6	-47	-6	multi-exon	FALSE	canonical	3	20	junction_1	64.8690989609074	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTTAAAATAGCCATTTT	NA	False	NA	NA	False	NA	NA	NA	34251327	34257361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
tx.5349	chr17	+	1277	3	ISM	ENSMUSG00000024334.10	ENSMUST00000174670.2	1231	4	1258	0	1258	0	3prime_fragment	FALSE	canonical	2	15	junction_1	2	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGTGTCCTTTTCAC	539	False	NA	NA	False	NA	NA	NA	34312653	34314207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_34313564_34313656_34313793_34313976
tx.5350	chr17	+	1128	5	FSM	ENSMUSG00000037649.11	ENSMUST00000236322.2	1108	5	-37	17	-37	5	multi-exon	FALSE	canonical	3	37	junction_1	3.83242742918897	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGACCTCTCCCTCCACG	6761	False	NA	NA	False	NA	NA	NA	34354564	34358057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34354733_34356087_34356373_34356876_34357156_34357380_34357510_34357790
tx.5351	chr17	+	1300	6	FSM	ENSMUSG00000079547.5	ENSMUST00000114232.4	1404	6	97	7	97	-7	multi-exon	FALSE	canonical	3	11	junction_3	6.61513416341649	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCCCAAGTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	34372142	34379197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34372428_34374406_34374689_34376219_34376505_34378317_34378435_34378602_34378639_34378902
tx.5352	chr17	-	760	5	ISM	ENSMUSG00000096727.4	ENSMUST00000174576.4	1352	6	1994	50	1449	-1	3prime_fragment	FALSE	canonical	2	4	junction_1	3.8405728739343	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCATTAGTTGCAAATA	NA	False	NA	NA	False	NA	NA	NA	34404744	34401010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_34401326_34402062_34402205_34402588_34402719_34403255_34403388_34404703
tx.5353	chr17	+	690	2	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGGAAAAGAAAAAAGAA	3609	False	NA	NA	False	NA	NA	NA	34438572	34445611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_+_34439079_34445427
tx.5354	chr17	+	1190	6	FSM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	17	5	17	4	multi-exon	FALSE	canonical	3	16	junction_1	17.3735431043872	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTGGCTTTGATAAT	NA	False	NA	NA	False	NA	NA	NA	34482199	34488388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34482380_34483734_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
tx.5355	chr17	+	1076	5	ISM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	1486	5	1364	4	3prime_fragment	FALSE	canonical	3	50	junction_2	5.35607132140714	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTGGCTTTGATAAT	NA	False	NA	NA	False	NA	NA	NA	34483668	34488388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
tx.5356	chr17	-	1120	5	FSM	ENSMUSG00000036594.16	ENSMUST00000040655.14	1128	5	1	7	1	-7	multi-exon	FALSE	canonical	2	6	junction_1	1.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGGTTTGGTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	34506796	34501724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34501998_34502128_34502304_34502548_34502831_34503261_34503511_34506655
tx.5357	chr17	+	1179	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	16	474	16	1	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	318	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCATAGAGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	34524856	34535174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
tx.5358	chr17	+	1333	4	FSM	ENSMUSG00000034786.18	ENSMUST00000038244.15	1343	4	10	0	10	0	multi-exon	FALSE	canonical	2	5	junction_1	3.29983164553722	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGACTGGTATCTGGGG	NA	False	NA	NA	False	NA	NA	NA	34808789	34810728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34809235_34809434_34809538_34809715_34809916_34810143
tx.5359	chr17	-	1135	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	97	6	68	-6	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	805	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAAGTCTCCCCAGTC	892	False	NA	NA	False	NA	NA	NA	34822567	34820070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
tx.5360	chr17	+	2143	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	25	22	25	9	multi-exon	FALSE	canonical	3	118	junction_1	5.07991688470939	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGGCCTGTTGTACTT	NA	False	NA	NA	False	NA	NA	NA	34824859	34832401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
tx.5361	chr17	-	1716	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	-7	1	-7	0	multi-exon	TRUE	canonical	3	52	junction_2	7.8700381193486	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	3923	False	NA	NA	False	NA	NA	NA	34846416	34835636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
tx.5362	chr17	+	1221	2	FSM	ENSMUSG00000033739.9	ENSMUST00000036720.9	1270	2	49	0	-28	0	multi-exon	FALSE	canonical	3	34	junction_1	0	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGGTCTGTGTTGTG	7408	False	NA	NA	False	NA	NA	NA	34863786	34865298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34863928_34864218
tx.5363	chr17	+	2522	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	44	0	-11	0	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9785	False	NA	NA	False	NA	NA	NA	34866163	34874048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
tx.5364	chr17	+	1436	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	11	0	11	0	multi-exon	FALSE	canonical	3	133	junction_1	19.7434940057619	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2987	False	NA	NA	False	NA	NA	NA	35056005	35058162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
tx.5365	chr17	+	1453	7	NNC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	20	-5	intron_retention	FALSE	canonical	2	5	junction_2	60.771886775237	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTCTCTTGCTGTGTCT	2996	False	NA	NA	False	NA	NA	NA	35056014	35058157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_35056193_35056368_35056762_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
tx.5366	chr17	+	1452	7	FSM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	20	47	20	0	multi-exon	FALSE	canonical	3	41	junction_1	48.3439643480847	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2996	False	NA	NA	False	NA	NA	NA	35056014	35058162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35056218_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
tx.5367	chr17	+	1493	6	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	-19	1	intron_retention	FALSE	canonical	3	133	junction_1	20.3115730557729	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCTGTGTCTGAATGG	3020	False	NA	NA	False	NA	NA	NA	35056038	35058163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35056193_35056368_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
tx.5368	chr17	+	1268	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	2	111	2	7	multi-exon	TRUE	canonical	3	201	junction_1	101.735146335964	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGCCTCTAGTCTTTCA	6	True	NA	NA	False	NA	NA	NA	35069385	35075237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
tx.5369	chr17	+	1480	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	19	108	2	7	multi-exon	FALSE	canonical	3	52	junction_1	144.013228559046	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGCCTCTAGTCTTTCA	6	True	NA	NA	False	NA	NA	NA	35069385	35075237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
tx.5370	chr17	+	1505	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	12	-118	2	0	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	6	True	NA	NA	False	NA	NA	NA	35069385	35075348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
tx.5371	chr17	+	991	5	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	12271	0	267	0	3prime_fragment	FALSE	canonical	3	414	junction_3	11.4972822875669	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	1788	False	NA	NA	False	NA	NA	NA	35130217	35133027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
tx.5372	chr17	+	1084	4	FSM	ENSMUSG00000013787.16	ENSMUST00000124002.2	1359	4	274	1	274	0	multi-exon	FALSE	canonical	3	414	junction_2	9.2736184954957	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	1795	False	NA	NA	False	NA	NA	NA	35130224	35133027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35130642_35131364_35131444_35131609_35131786_35132615
tx.5373	chr17	+	364	2	ISM	ENSMUSG00000007034.16	ENSMUST00000169230.2	2246	18	11221	82	11221	-2	3prime_fragment	FALSE	canonical	3	35	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTTTATGGCTTTATT	5610	False	NA	NA	False	NA	NA	NA	35147915	35149330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_35148040_35149090
tx.5374	chr17	+	1805	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	69	600	8	-600	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	7992	False	NA	NA	False	NA	NA	NA	35150297	35154297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
tx.5375	chr17	-	2006	2	FSM	ENSMUSG00000092203.8_ENSMUSG00000092687.3	ENSMUST00000174464.2	785	2	-1224	3	0	0	multi-exon	FALSE	canonical	3	190	junction_1	0	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6010	False	NA	NA	False	NA	NA	NA	35171444	35169216	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35169452_35169673
tx.5376	chr17	-	581	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	0	-2	0	0	multi-exon	FALSE	canonical	3	94	junction_4	37.0497975702972	612	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6010	False	NA	NA	False	NA	NA	NA	35171444	35169216	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
tx.5377	chr17	+	860	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	-20	0	-2	0	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	135	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	81	False	NA	NA	False	NA	NA	NA	35200835	35204867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
tx.5378	chr17	+	1126	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174860.8	691	4	-41	-394	-1	0	multi-exon	FALSE	canonical	3	1479	junction_1	117.83132954449	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	242	False	NA	NA	False	NA	NA	NA	35201103	35204867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35201664_35204084_35204116_35204224_35204285_35204392
tx.5379	chr17	+	873	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	596.250995806296	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	243	False	NA	NA	False	NA	NA	NA	35201104	35204867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
tx.538	chr1	-	1437	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	53	897	0	6	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGTCATGTTTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	161078736	161068578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
tx.5380	chr17	-	2947	2	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	307	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	259	False	NA	NA	False	NA	NA	NA	35219344	35215700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_-_35218446_35219142
tx.5381	chr17	+	4008	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	133	-4	69	4	multi-exon	TRUE	canonical	0	0	junction_12	417.564149877336	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9607	False	NA	NA	False	NA	NA	NA	35220095	35235302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
tx.5382	chr17	+	2277	18	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	10626	-4	398	4	3prime_fragment	FALSE	canonical	0	0	junction_7	410.844593826932	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	35230588	35235302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
tx.5383	chr17	+	393	2	ISM	ENSMUSG00000007029.17	ENSMUST00000172637.8	3731	28	12953	-4	702	4	3prime_fragment	FALSE	canonical	3	1811	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	1633	False	NA	NA	False	NA	NA	NA	35234642	35235302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_35234896_35235162
tx.5384	chr17	-	602	4	FSM	ENSMUSG00000036185.10	ENSMUST00000173211.8	618	4	16	0	16	0	multi-exon	FALSE	canonical	3	47	junction_3	4.54606056566195	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGTTTGGCTCCTGT	NA	False	NA	NA	False	NA	NA	NA	35246619	35244934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419
tx.5385	chr17	-	678	5	FSM	ENSMUSG00000036185.10	ENSMUST00000174037.8	665	5	-13	0	-13	0	multi-exon	FALSE	canonical	3	19	junction_4	14.8218588577816	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGTTTGGCTCCTGT	NA	False	NA	NA	False	NA	NA	NA	35246903	35244934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419_35246565_35246772
tx.5386	chr17	-	1091	11	ISM	ENSMUSG00000007035.16	ENSMUST00000097338.11	2678	25	-24	10517	-5	24	5prime_fragment	FALSE	canonical	2	3	junction_1	3.52278299076171	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTTGGTTGGGTTTTG	1765	False	NA	NA	False	NA	NA	NA	35265726	35258097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_35258316_35260445_35260492_35261073_35261157_35262704_35262741_35263000_35263111_35263292_35263415_35264089_35264153_35264269_35264351_35264905_35265030_35265206_35265364_35265675
tx.5387	chr17	+	1155	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	289	22	289	-22	multi-exon	TRUE	canonical	3	1084	junction_1	70.1524055182714	637	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTGTTGTTTTTACACA	1965	False	NA	NA	False	NA	NA	NA	35269230	35277703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
tx.5388	chr17	+	1310	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	36	-4	-30	0	multi-exon	FALSE	canonical	3	393	junction_1	36.6488593122472	737	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	NA	False	NA	NA	NA	35278046	35281071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
tx.5389	chr17	+	1257	7	NIC	ENSMUSG00000007039.13	novel	682	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	154.377693408802	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	NA	False	NA	NA	NA	35278791	35281071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35278941_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
tx.5390	chr17	+	1110	6	ISM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	1066	-4	285	0	3prime_fragment	FALSE	canonical	3	436	junction_2	25.772853935876	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	NA	False	NA	NA	NA	35279076	35281071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
tx.5391	chr17	+	1091	4	NNC	ENSMUSG00000092586.9	novel	962	3	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2.16024689946929	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTGTGTTTATTGTTAGA	NA	False	NA	NA	False	NA	NA	NA	35284288	35289026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_35284420_35286302_35286421_35287842_35287954_35288295
tx.5392	chr17	+	962	3	FSM	ENSMUSG00000092586.9	ENSMUST00000173478.2	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTGTGTTTATTGTTAGA	NA	False	NA	NA	False	NA	NA	NA	35286300	35289026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35286421_35287842_35287954_35288295
tx.5393	chr17	-	615	3	NNC	ENSMUSG00000073413.10	novel	546	3	NA	NA	848	101	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	7	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCGTTTGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	35296184	35290317	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_35290736_35293150_35293289_35296125
tx.5394	chr17	-	815	3	FSM	ENSMUSG00000073413.10	ENSMUST00000172639.8	690	3	4	-129	4	95	multi-exon	FALSE	canonical	2	8	junction_2	7	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAAATGTTCGTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	35297037	35290323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35290736_35293150_35293289_35296772
tx.5395	chr17	+	1043	4	NIC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-40	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	215.629826838084	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGAGAGCTGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	35295837	35297781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35295936_35296110_35296183_35296812_35296939_35297034
tx.5396	chr17	+	1074	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172678.8	750	4	-69	-255	-40	1	multi-exon	FALSE	canonical	3	186	junction_1	129.208702837266	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGAGAGCTGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	35295837	35297781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35295967_35296110_35296183_35296812_35296939_35297034
tx.5397	chr17	+	1167	3	FSM	ENSMUSG00000013766.12	ENSMUST00000013910.5	1142	3	-27	2	8	-2	multi-exon	FALSE	canonical	3	419	junction_2	34.5	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTAAGAGAGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	35295885	35297778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35296183_35296812_35296939_35297034
tx.5398	chr17	+	1989	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	-44	0	-16	0	multi-exon	FALSE	canonical	3	106	junction_5	22.1293102285439	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	NA	False	NA	NA	NA	35308222	35321963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
tx.5399	chr17	+	1175	12	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-988	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	47.4803134497789	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	NA	False	NA	NA	NA	35317918	35321963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320754_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
tx.54	chr1	-	655	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	22	6	-4	-6	multi-exon	FALSE	canonical	3	315	junction_1	0.5	196	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGATTTATTATTTTA	NA	False	NA	NA	False	NA	NA	NA	24044715	24035025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_24035442_24042237_24042388_24044626
tx.5400	chr17	+	844	3	FSM	ENSMUSG00000034482.3	ENSMUST00000037849.3	509	3	-154	-181	-154	181	multi-exon	TRUE	canonical	2	3	junction_1	2.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTCTCCTCTGATG	6557	False	NA	NA	False	NA	NA	NA	35327100	35331148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35327397_35329642_35329808_35330765
tx.5401	chr17	-	932	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	32	-3	32	1	multi-exon	TRUE	canonical	3	826	junction_1	47.9780042195264	1020	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTCCTACTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	35340230	35335170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
tx.5402	chr17	+	1259	3	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4601	False	NA	NA	False	NA	NA	NA	35340470	35343791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35340527_35342028_35342636_35343195
tx.5403	chr17	+	1479	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	40	-1	40	1	multi-exon	FALSE	canonical	3	45	junction_1	21.5	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4629	False	NA	NA	False	NA	NA	NA	35340498	35343791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35340775_35342028_35342636_35343195
tx.5404	chr17	+	1742	2	FSM	ENSMUSG00000092417.4	ENSMUST00000052167.9	1295	2	-438	-9	-438	1	multi-exon	FALSE	canonical	3	88	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	5620	False	NA	NA	False	NA	NA	NA	35341489	35343791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35342636_35343195
tx.5405	chr17	-	887	6	FSM	ENSMUSG00000024391.8	ENSMUST00000025249.7	1013	6	126	0	126	0	multi-exon	FALSE	canonical	3	28	junction_5	5.65685424949238	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGGTTTTGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	35350900	35347972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35348112_35349055_35349155_35349383_35349483_35349814_35349895_35350170_35350326_35350585
tx.5406	chr17	+	714	6	ISM	ENSMUSG00000024392.18	ENSMUST00000166426.9	3787	24	10492	-7	-218	6	3prime_fragment	FALSE	canonical	3	699	junction_5	69.8386712359277	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGTAGTTTCGAGTAC	5666	False	NA	NA	False	NA	NA	NA	35364645	35366288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
tx.5407	chr17	-	574	4	ISM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	27	12749	27	-4692	5prime_fragment	FALSE	canonical	3	184	junction_2	7.25718035235908	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGCCCCCGAGGTACC	NA	False	NA	NA	False	NA	NA	NA	35383846	35380800	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_35380886_35381177_35381356_35381847_35382023_35383710
tx.5408	chr17	-	411	4	FSM	ENSMUSG00000073412.7	ENSMUST00000097336.5	415	4	0	4	0	-4	multi-exon	FALSE	canonical	2	6	junction_2	1.24721912892465	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAGGCTTCTCTATAT	NA	False	NA	NA	False	NA	NA	NA	35407415	35404074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35404287_35405560_35405581_35405921_35406018_35407332
tx.5409	chr17	+	1132	3	NNC	ENSMUSG00000024399.6	novel	1160	3	NA	NA	-7548	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGCCCTTGCCAGTGTC	5183	False	NA	NA	False	NA	NA	NA	35405866	35415279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_35406083_35414025_35414342_35414679
tx.5410	chr17	-	1446	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	1	0	1	0	multi-exon	FALSE	canonical	3	75	junction_2	9.89949493661167	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	35454767	35439150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
tx.5411	chr17	+	1689	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	26	24	-6	3	multi-exon	FALSE	canonical	3	2129	junction_1	149.184985839729	2444	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	35460747	35472659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
tx.5412	chr17	+	1593	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	366	143	0	3	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAGTGACCTTGATTG	2085	False	NA	NA	False	NA	NA	NA	35482071	35486332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
tx.5413	chr17	+	1712	5	NIC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	132	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.880895352071	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTCCAGAATCTGGGTC	2217	False	NA	NA	False	NA	NA	NA	35482203	35486463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485841
tx.5414	chr17	+	1654	6	NIC	ENSMUSG00000091705.9	novel	1150	5	NA	NA	889	2	combination_of_known_junctions	TRUE	canonical	1	3	junction_4	2.33238075793812	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTTGTTTCTGTTTG	5769	False	NA	NA	False	NA	NA	NA	35562106	35565740	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564635_35564685_35564819
tx.5415	chr17	+	1580	5	NIC	ENSMUSG00000091705.9	novel	1262	7	NA	NA	914	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	2.23606797749979	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTTGTTTCTGTTTG	5794	False	NA	NA	False	NA	NA	NA	35562131	35565740	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564819
tx.5416	chr17	+	1432	6	NIC	ENSMUSG00000067235.15	novel	1473	7	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	2.93938769133981	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCTGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	35780985	35785452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35781077_35781272_35781543_35781722_35781999_35783979_35784256_35784382_35784487_35785037
tx.5417	chr17	+	904	4	NIC	ENSMUSG00000067235.15	novel	1473	7	NA	NA	-18	4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	3.29983164553722	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCTGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	35780967	35785452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35781077_35783979_35784256_35784382_35784487_35785037
tx.5418	chr17	+	1099	4	NIC	ENSMUSG00000067235.15	novel	1473	7	NA	NA	701	4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	3.09120616516523	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCTGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	35781694	35785452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_35781999_35783979_35784256_35784382_35784487_35785037
tx.5419	chr17	+	1349	5	FSM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	11	2	11	-2	multi-exon	FALSE	canonical	3	3795	junction_3	232.519354033164	5980	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCTGAATTTTGTTTTC	3047	False	NA	NA	False	NA	NA	NA	35816925	35821667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184
tx.5420	chr17	-	1604	4	NIC	ENSMUSG00000050410.16	novel	1665	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	19.7989898732233	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9346	False	NA	NA	False	NA	NA	NA	35827708	35823630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_35824082_35825370_35825918_35826774_35827328_35827655
tx.5421	chr17	-	1889	3	ISM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	15	-1	15	1	intron_retention	FALSE	canonical	3	75	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCGTTGAATCTAAGT	9387	False	NA	NA	False	NA	NA	NA	35827667	35823632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_35824082_35825370_35825918_35826774
tx.5422	chr17	-	1646	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	17	2	13	1	multi-exon	FALSE	canonical	3	29	junction_3	21.6846079563875	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCGTTGAATCTAAGT	9350	False	NA	NA	False	NA	NA	NA	35827704	35823632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
tx.5423	chr17	+	2625	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-77	1	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_1	28.0148255362583	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4355	False	NA	NA	False	NA	NA	NA	35827919	35841903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_35828009_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
tx.5424	chr17	+	2706	18	FSM	ENSMUSG00000040312.15	ENSMUST00000164242.9	2656	18	-40	-10	-40	1	multi-exon	FALSE	canonical	3	44	junction_1	24.5503507751598	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4392	False	NA	NA	False	NA	NA	NA	35827956	35841903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
tx.5425	chr17	+	1088	3	NNC	ENSMUSG00000024409.9	novel	843	2	NA	NA	-496	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTCTGCTTTTTTTACC	1716	False	NA	NA	False	NA	NA	NA	35843601	35845544	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_35843825_35844075_35844192_35844795
tx.5426	chr17	+	1885	2	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	2859	-266	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATTTGCCTTCTTGGGG	68	False	NA	NA	False	NA	NA	NA	35865883	35867811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_35865951_35865993
tx.5427	chr17	-	3828	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	4	593	4	163	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTGCAGCGCCTTTC	1765	False	NA	NA	False	NA	NA	NA	35978480	35967118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
tx.5428	chr17	-	1653	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	24	2	-12	-2	multi-exon	FALSE	canonical	3	142	junction_8	17.8418429806661	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACGCGGCTTCAGACGTC	NA	False	NA	NA	False	NA	NA	NA	35984607	35978623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
tx.5429	chr17	+	1125	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	0	6	0	-6	multi-exon	FALSE	canonical	3	7	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGTTCTCGAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	36132575	36133809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_36132821_36132929
tx.5430	chr17	+	1705	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	115	5	-2	-5	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	140	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATCTATACTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	36134236	36143678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
tx.5431	chr17	+	1617	12	NIC	ENSMUSG00000059714.14	novel	1825	13	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	49.9444319318153	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATACTTCTTTCCTCA	NA	False	NA	NA	False	NA	NA	NA	36134236	36143681	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_36134394_36134698_36134756_36135018_36135095_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
tx.5432	chr17	+	1626	13	NIC	ENSMUSG00000059714.14	novel	651	8	NA	NA	-12	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	54.6198986939131	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTATCTATACTTCT	NA	False	NA	NA	False	NA	NA	NA	36134405	36143674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_36134488_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
tx.5433	chr17	-	1691	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	74	884	-15	800	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	9614	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTTCTCTTTCCAC	NA	False	NA	NA	False	NA	NA	NA	36149124	36145696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
tx.5434	chr17	+	1448	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	16	2	-4	-2	multi-exon	FALSE	canonical	3	236	junction_1	13.2748718344933	279	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACTTGTCTGTCCATG	4605	False	NA	NA	False	NA	NA	NA	36172225	36176292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
tx.5435	chr17	+	2030	3	FSM	ENSMUSG00000034595.18	ENSMUST00000190496.2	1395	3	-633	-2	-633	0	multi-exon	FALSE	canonical	3	80	junction_1	4	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	36178661	36186488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_36179678_36184617_36184832_36185688
tx.5436	chr17	+	1027	7	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	8090	0	-27	0	3prime_fragment	FALSE	canonical	3	1011	junction_1	73.3325757536626	617	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	7355	False	NA	NA	False	NA	NA	NA	36198800	36203562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
tx.5437	chr17	-	1177	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148482.8	1193	6	16	0	-1	0	multi-exon	FALSE	canonical	3	95	junction_5	123.227269709265	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	NA	False	NA	NA	NA	36207996	36203568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
tx.5438	chr17	-	1113	6	NIC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	147.212227752996	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	NA	False	NA	NA	NA	36207997	36203568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207936
tx.5439	chr17	-	1241	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	52	0	52	0	multi-exon	FALSE	canonical	3	184	junction_5	90.4765162901402	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	NA	False	NA	NA	NA	36208271	36203568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
tx.544	chr1	+	1339	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	28	94	-9	-94	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTGTTTGAAAACGAG	NA	False	NA	NA	False	NA	NA	NA	162398186	162422840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
tx.5440	chr17	-	1441	13	FSM	ENSMUSG00000024426.18	ENSMUST00000061052.12	1452	13	11	0	-7	0	multi-exon	FALSE	canonical	3	70	junction_5	27.2308801424657	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTTGTCATTATTCAAA	NA	False	NA	NA	False	NA	NA	NA	36220956	36208486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
tx.5441	chr17	-	1376	12	FSM	ENSMUSG00000024426.18	ENSMUST00000077494.13	1340	12	-22	-14	7	0	multi-exon	TRUE	canonical	3	28	junction_5	34.4359508470988	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTTGTCATTATTCAAA	NA	False	NA	NA	False	NA	NA	NA	36220960	36208486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
tx.5442	chr17	-	1082	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	-4	1	-4	-1	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	1263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4292	False	NA	NA	False	NA	NA	NA	36227285	36221271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
tx.5443	chr17	+	1341	2	FSM	ENSMUSG00000039220.17_ENSMUSG00000084751.3	ENSMUST00000154856.2	732	2	-12	-597	-12	3	multi-exon	FALSE	canonical	3	16	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGGGCAAAAATCATAGT	NA	False	NA	NA	False	NA	NA	NA	36227313	36229253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_36227491_36228089
tx.5444	chr17	-	803	2	ISM	ENSMUSG00000038762.16	ENSMUST00000173111.2	855	4	779	-471	481	3	3prime_fragment	FALSE	canonical	3	962	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTGTGGGGTGCTTCC	3647	False	NA	NA	False	NA	NA	NA	36268599	36267707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_36268482_36268570
tx.5445	chr17	-	3167	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	-6	0	-6	0	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	NA	False	NA	NA	NA	36280659	36267710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
tx.5446	chr17	-	794	9	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	-8	5192	-8	-310	5prime_fragment	FALSE	canonical	3	825	junction_3	70.9954884129971	151	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAAGCTAAAGA	NA	False	NA	NA	False	NA	NA	NA	36280661	36272902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
tx.5447	chr17	-	1924	4	FSM	ENSMUSG00000038500.16	ENSMUST00000172429.8	1878	4	-46	0	-46	0	multi-exon	FALSE	canonical	3	103	junction_2	20.5101600838869	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	36289909	36283432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602
tx.5448	chr17	-	1852	5	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	22.0056810846654	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	36290182	36283432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018
tx.5449	chr17	+	1979	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	274	595	-263	-595	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	193	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTCCCCAGGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	36291016	36299759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
tx.5450	chr17	+	1668	10	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	1233	595	696	-595	3prime_fragment	FALSE	canonical	3	585	junction_5	37.9046887877841	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTCCCCAGGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	36291975	36299759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
tx.5451	chr17	+	790	4	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	7654	595	7117	-595	3prime_fragment	FALSE	canonical	3	612	junction_1	30.4302481094059	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTCCCCAGGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	36298396	36299759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_36298536_36298616_36298780_36299004_36299146_36299412
tx.5452	chr17	+	1068	2	FSM	ENSMUSG00000092368.2	ENSMUST00000173900.2	1111	2	46	-3	46	3	multi-exon	FALSE	canonical	3	20	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTATCTCTATTAGTCCAC	NA	False	NA	NA	False	NA	NA	NA	36305390	36349330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_36305453_36348324
tx.5453	chr17	-	1243	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	-26	-79	-26	5	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	NA	False	NA	NA	NA	36395141	36391001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
tx.5454	chr17	-	967	5	FSM	ENSMUSG00000073406.11	ENSMUST00000194244.6	862	5	-26	-79	-26	5	multi-exon	FALSE	canonical	3	214	junction_3	129.95191418367	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	NA	False	NA	NA	NA	36395141	36391001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394858_36395051
tx.5455	chr17	-	527	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	202	0	-11	0	multi-exon	FALSE	canonical	3	621	junction_3	61.4262769505038	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	NA	False	NA	NA	NA	36568759	36566558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
tx.5456	chr17	-	425	4	FSM	ENSMUSG00000024446.14	ENSMUST00000077535.5	437	4	-10	22	-10	0	multi-exon	FALSE	canonical	3	63	junction_3	333.755399456948	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	NA	False	NA	NA	NA	36568758	36566558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568674
tx.5457	chr17	-	1506	5	FSM	ENSMUSG00000045409.17	ENSMUST00000113704.10	1465	5	-38	-3	-38	3	multi-exon	FALSE	canonical	3	20	junction_1	19.421315609402	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTGTTTGTCATCTG	NA	False	NA	NA	False	NA	NA	NA	36582313	36573493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_36574130_36574620_36574852_36578016_36578113_36579500_36579959_36582228
tx.5458	chr17	+	3213	9	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-3	8	intron_retention	FALSE	non_canonical	0	0	junction_5	83.9224902812113	11	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAGACAGTCATCTGGT	NA	False	NA	NA	False	NA	NA	NA	37148029	37170280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
tx.5459	chr17	+	3189	9	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	88.8776370916779	11	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	37148031	37170290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
tx.5460	chr17	+	3113	8	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	104.245393379354	2	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	37148031	37170290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_37148157_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
tx.5461	chr17	-	1901	7	FSM	ENSMUSG00000050747.15	ENSMUST00000025329.13	1843	7	-61	3	-38	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGCCTTTGTGTTTTGT	7405	False	NA	NA	False	NA	NA	NA	37178140	37171585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_37172475_37173218_37173252_37173674_37173791_37175140_37175164_37175852_37176084_37177196_37177293_37177627
tx.5462	chr17	-	646	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	23	930	23	4	multi-exon	FALSE	canonical	3	708	junction_2	5	239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTCCGTTCTCCTGCCC	NA	False	NA	NA	False	NA	NA	NA	37262582	37260177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_37260447_37260768_37260878_37262314
tx.5463	chr17	-	664	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	48	-2	-3	0	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	330	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGATGTTATGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	37269377	37265247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
tx.5464	chr17	+	989	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	-12	-1	-12	1	multi-exon	FALSE	canonical	0	0	junction_1	121.5	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	False	NA	NA	False	NA	NA	NA	37269471	37276515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_37269595_37275248_37275325_37275725
tx.5465	chr17	+	1075	3	FSM	ENSMUSG00000036214.15	ENSMUST00000173814.2	1020	3	-54	-1	-5	1	multi-exon	FALSE	canonical	3	19	junction_1	112	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	False	NA	NA	False	NA	NA	NA	37269478	37276515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_37269688_37275248_37275325_37275725
tx.5466	chr17	-	1680	8	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	308	1090	multi-exon	FALSE	canonical	3	13	junction_5	79.6415438712992	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATTCTATTATTTGTA	NA	False	NA	NA	False	NA	NA	NA	37299629	37278996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396
tx.5467	chr17	-	1965	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	772	-278	280	278	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAAGTGAGACTGGAAA	NA	False	NA	NA	False	NA	NA	NA	37299657	37294674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
tx.5468	chr17	+	1670	5	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-8	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1406.78256582174	205	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	NA	False	NA	NA	NA	37313437	37321504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_37313632_37314177_37314208_37315688_37315796_37316941_37317087_37320310
tx.5469	chr17	+	1708	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	21	20	-8	-20	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	NA	False	NA	NA	NA	37313437	37321504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
tx.5470	chr17	+	1214	4	FSM	ENSMUSG00000024462.18	ENSMUST00000174456.8	1595	4	-8	389	0	-389	multi-exon	FALSE	canonical	3	45	junction_1	13.0213499897497	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTGAGATATGGGATTG	NA	False	NA	NA	False	NA	NA	NA	37356911	37359970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312
tx.5471	chr17	+	1832	4	NNC	ENSMUSG00000092390.2	novel	1406	3	NA	NA	-13784	309	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1.4142135623731	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAACATACCAG	NA	False	NA	NA	False	NA	NA	NA	38306753	38323596	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_38306872_38320538_38320666_38320869_38320931_38322070
tx.5472	chr17	-	1464	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	475	3	475	-3	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGATGTGTGAGTAGA	NA	False	NA	NA	False	NA	NA	NA	41245463	41233944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
tx.5473	chr17	+	3338	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	8	328	8	-328	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTAGTGTGATGTTAC	NA	False	NA	NA	False	NA	NA	NA	41245583	41272551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
tx.5474	chr17	+	1501	8	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	12526	772	-7977	-772	3prime_fragment	FALSE	canonical	3	311	junction_2	28.4726865179776	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCGATTCTTCCTTCAAT	NA	False	NA	NA	False	NA	NA	NA	41258101	41272107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
tx.5475	chr17	+	1116	2	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	24162	328	3659	-328	3prime_fragment	FALSE	canonical	3	326	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTAGTGTGATGTTAC	NA	False	NA	NA	False	NA	NA	NA	41269737	41272551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_41269761_41271458
tx.5476	chr17	+	1867	3	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	60718	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	116.5	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACTTGTGTGGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	43388176	43400075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_43388373_43396226_43396456_43398633
tx.5477	chr17	-	2711	4	FSM	ENSMUSG00000023961.17	ENSMUST00000024757.14	4560	4	-19	1868	-19	-1860	multi-exon	FALSE	canonical	3	12	junction_3	10.2740233382816	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATTCTCATGTTTAT	NA	False	NA	NA	False	NA	NA	NA	44416719	44409066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416539
tx.5478	chr17	-	4516	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	-64	-7	-19	-1	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCAGCCTTCTTAATTT	NA	False	NA	NA	False	NA	NA	NA	44416719	44407199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
tx.5479	chr17	+	1442	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	64	2	64	-2	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGAGTGGCCTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	45088102	45430175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
tx.5480	chr17	-	2839	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	186	2	-10	-2	multi-exon	TRUE	canonical	3	561	junction_9	75.0022221893014	125	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTAGCCTTTTGTTTG	2370	False	NA	NA	False	NA	NA	NA	45744477	45702811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
tx.5481	chr17	-	1089	8	FSM	ENSMUSG00000023935.11	ENSMUST00000024731.9	1160	8	81	-10	7	10	multi-exon	TRUE	canonical	2	8	junction_7	6.20730313782869	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGGTAGCATGTATGC	NA	False	NA	NA	False	NA	NA	NA	45785783	45759852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_45760118_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
tx.5482	chr17	+	3340	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	0	9	0	-9	multi-exon	TRUE	canonical	3	146	junction_8	22.4045468336421	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTATGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	45817766	45831760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
tx.5483	chr17	+	874	4	FSM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	-24	0	-12	0	multi-exon	FALSE	canonical	3	37	junction_3	186.912338335976	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGCCAGCTCTAATGG	NA	False	NA	NA	False	NA	NA	NA	45874861	45876981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45876589
tx.5484	chr17	+	1842	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	65	-1	-9	0	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	False	NA	NA	False	NA	NA	NA	45874864	45878597	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
tx.5485	chr17	-	2515	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	2	3	2	-3	multi-exon	TRUE	canonical	3	9221	junction_4	988.252604347694	12463	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCCTGCTCTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	45884195	45878703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
tx.5486	chr17	-	1974	13	FSM	ENSMUSG00000023942.16	ENSMUST00000051574.13	1996	13	25	-3	-4	0	multi-exon	FALSE	canonical	3	154	junction_12	699.864927444337	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	45906473	45896125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
tx.5487	chr17	-	2085	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	1063	junction_5	395.007197897117	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	45906483	45896125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
tx.5488	chr17	-	1991	13	FSM	ENSMUSG00000023942.16	ENSMUST00000064889.13	1988	13	0	-3	0	0	multi-exon	FALSE	canonical	3	154	junction_12	659.372555287727	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	45906496	45896125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
tx.5489	chr17	-	2091	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	1453	junction_5	311.5369990469	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	45906495	45896125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
tx.5490	chr17	-	2223	13	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	1453	junction_5	323.049746771126	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	45906495	45896125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
tx.5491	chr17	-	2173	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_13	684.125062098821	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	45910562	45896125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45910398
tx.5492	chr17	-	854	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	45	-283	45	0	multi-exon	FALSE	canonical	3	164	junction_1	0	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	45912847	45911896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_45912612_45912708
tx.5493	chr17	-	772	2	FSM	ENSMUSG00000079471.5	ENSMUST00000208801.2	437	2	47	-382	43	0	multi-exon	FALSE	canonical	3	33	junction_1	0	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	45912849	45911896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_45912612_45912792
tx.5494	chr17	-	3236	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	30.8694933524137	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	45997181	45971101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
tx.5495	chr17	+	605	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	40	0	5	0	multi-exon	FALSE	canonical	3	814	junction_1	143	551	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	NA	False	NA	NA	NA	45997287	46009421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_45997354_46006407_46006499_46008973
tx.5496	chr17	-	3349	3	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTCGGTCATG	NA	False	NA	NA	False	NA	NA	NA	46037391	46032926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_-_46035836_46036244_46036563_46037269
tx.5497	chr17	-	1405	2	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATAGAGTGAGATGCC	NA	False	NA	NA	False	NA	NA	NA	46037364	46034525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr17_-_46035836_46037269
tx.5498	chr17	-	2048	3	ISM	ENSMUSG00000023951.19	ENSMUST00000133605.8	874	4	782	-1607	703	-6	3prime_fragment	FALSE	canonical	3	338	junction_2	63	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAAGCTCTCCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	46335025	46327924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_46329806_46331916_46332049_46334990
tx.5499	chr17	-	1842	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	196	-645	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	187.412794535367	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGTTAATATTTAATT	NA	False	NA	NA	False	NA	NA	NA	46342086	46328563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341971
tx.55	chr1	+	2020	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	17	2416	-13	639	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCCTTTGTTGCTTTTA	NA	False	NA	NA	False	NA	NA	NA	24717727	24802113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
tx.5500	chr17	+	873	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	9	2	0	-2	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	603	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTGGTCAGTGCTTAG	NA	False	NA	NA	False	NA	NA	NA	46421920	46439834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
tx.5501	chr17	-	950	5	FSM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	16	0	16	0	multi-exon	FALSE	canonical	1	1	junction_4	1.22474487139159	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTGATTGTTGT	NA	False	NA	NA	False	NA	NA	NA	46455126	46440196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46440425_46445898_46446046_46447667_46447798_46452472_46452639_46454847
tx.5502	chr17	-	1255	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	17	0	17	0	multi-exon	FALSE	canonical	3	95	junction_1	3.5	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGATTTAGACTTTT	NA	False	NA	NA	False	NA	NA	NA	46464462	46458312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46459211_46463704_46463968_46464368
tx.5503	chr17	+	2007	5	FSM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	-29	159	6	-159	multi-exon	FALSE	canonical	3	272	junction_2	19.3180614969515	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTAGTGGTTGCATG	NA	False	NA	NA	False	NA	NA	NA	46513713	46520436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
tx.5504	chr17	+	621	2	ISM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	2	4601	2	-4601	5prime_fragment	FALSE	canonical	3	299	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAGTGGGCTACAAAG	NA	False	NA	NA	False	NA	NA	NA	46513744	46515994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_46513952_46515580
tx.5505	chr17	-	1240	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	67	7	-19	-7	multi-exon	TRUE	canonical	3	702	junction_8	54.719597723302	1293	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	46558913	46554852	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
tx.5506	chr17	+	1496	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	19	520	19	0	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	2599	False	NA	NA	False	NA	NA	NA	46559024	46562943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
tx.5507	chr17	+	1632	8	FSM	ENSMUSG00000071074.10	ENSMUST00000151488.2	1570	8	-46	-16	19	0	multi-exon	FALSE	canonical	3	158	junction_7	7.73542078324622	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	2599	False	NA	NA	False	NA	NA	NA	46559024	46562943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562414_46562491
tx.5508	chr17	+	1515	9	NNC	ENSMUSG00000071074.10	novel	2035	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	55.4209741433692	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	2611	False	NA	NA	False	NA	NA	NA	46559036	46562943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562258_46562414_46562491
tx.5509	chr17	+	1270	8	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	757	520	-192	0	3prime_fragment	FALSE	canonical	3	158	junction_7	8.13658906622751	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	3337	False	NA	NA	False	NA	NA	NA	46559762	46562943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
tx.5510	chr17	-	2816	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-5	134	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	112.156620125682	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGGCTGTGTGAGTGT	5813	False	NA	NA	False	NA	NA	NA	46593945	46568642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
tx.5511	chr17	-	2559	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_7	88.074059745194	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5819	False	NA	NA	False	NA	NA	NA	46593939	46568799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
tx.5512	chr17	-	2429	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	-7	-10	-1	4	multi-exon	FALSE	canonical	3	131	junction_7	91.006850915633	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTCCTTCCCACTT	5826	False	NA	NA	False	NA	NA	NA	46593932	46568792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
tx.5513	chr17	-	2433	10	FSM	ENSMUSG00000012296.17	ENSMUST00000012440.14	2426	10	-3	-4	0	4	multi-exon	FALSE	canonical	3	80	junction_7	101.660412679532	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTCCTTCCCACTT	5819	False	NA	NA	False	NA	NA	NA	46593939	46568792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
tx.5514	chr17	-	2523	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	117.719199793407	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5819	False	NA	NA	False	NA	NA	NA	46593939	46568799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
tx.5515	chr17	-	670	3	ISM	ENSMUSG00000067144.8	ENSMUST00000233715.2	1410	10	3871	-174	3871	-56	3prime_fragment	FALSE	canonical	3	32	junction_1	4.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGAAGTCATTGACTT	7516	False	NA	NA	False	NA	NA	NA	46744684	46743164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_46743444_46743872_46744080_46744500
tx.5516	chr17	+	1135	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	55	0	55	0	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	871	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCACGGTGTC	NA	False	NA	NA	False	NA	NA	NA	46807691	46810550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
tx.5517	chr17	-	2391	17	NNC	ENSMUSG00000003546.11	novel	2313	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	30.5511226266728	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCGGAGTCTTCATTG	NA	False	NA	NA	False	NA	NA	NA	46956953	46941549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956900
tx.5518	chr17	-	885	5	ISM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	9622	-8	9622	1	3prime_fragment	FALSE	canonical	3	108	junction_2	12.051970793194	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCGGAGTCTTCATTGA	NA	False	NA	NA	False	NA	NA	NA	46946448	46941548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335
tx.5519	chr17	-	948	6	ISM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	9342	-4	9342	-3	3prime_fragment	FALSE	canonical	3	105	junction_5	12.4354332453679	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	46946728	46941552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657
tx.5520	chr17	-	2365	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	-55	3	-55	-3	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	46957003	46941552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
tx.5521	chr17	+	1019	7	FSM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	12	0	-2	0	multi-exon	FALSE	canonical	3	984	junction_4	70.4430423975443	768	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	46957166	46961058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
tx.5522	chr17	+	1182	5	FSM	ENSMUSG00000038545.14	ENSMUST00000125949.2	1321	5	135	4	135	-4	multi-exon	TRUE	canonical	3	95	junction_4	5.8309518948453	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGACCTGTATGGGACT	NA	False	NA	NA	False	NA	NA	NA	46972847	46975286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
tx.5523	chr17	-	1461	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	46	-218	-19	215	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	437	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAGGCATGCACCAG	NA	False	NA	NA	False	NA	NA	NA	46985232	46978168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
tx.5524	chr17	-	2084	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	13	3	13	0	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	46991817	46985478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
tx.5525	chr17	+	821	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	128	-4	-10	4	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	489	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACACCGCCTGTGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	46992039	46994032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
tx.5526	chr17	-	2891	15	FSM	ENSMUSG00000059409.10	ENSMUST00000233988.2	3038	15	147	0	38	0	multi-exon	FALSE	canonical	3	79	junction_14	104.207504919908	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1147	False	NA	NA	False	NA	NA	NA	47015890	46993916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011076_47015758
tx.5527	chr17	-	3023	14	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	37	0	intron_retention	FALSE	canonical	3	369	junction_8	38.3709702893574	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1146	False	NA	NA	False	NA	NA	NA	47015891	46993916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
tx.5528	chr17	-	2893	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	33	0	33	0	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1142	False	NA	NA	False	NA	NA	NA	47015895	46993916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
tx.5529	chr17	-	1039	6	FSM	ENSMUSG00000002769.10	ENSMUST00000002846.9	1035	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	17	junction_3	8.1338797630651	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCCTGGTGTTTCTT	2975	False	NA	NA	False	NA	NA	NA	47040098	47036589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_47036898_47036986_47037109_47037194_47037338_47037531_47037643_47038190_47038319_47039871
tx.5530	chr17	-	1854	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	5	49	5	2	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	337	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTACTGCTATGAATT	NA	False	NA	NA	False	NA	NA	NA	47063135	47046679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
tx.5531	chr17	-	1877	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	192.284788789961	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATTTTGCTACTGCTA	NA	False	NA	NA	False	NA	NA	NA	47063126	47046685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_47047873_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
tx.5532	chr17	-	1416	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	-3	1193	-3	-1193	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	2309	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGTATACCTTTAG	NA	False	NA	NA	False	NA	NA	NA	47093585	47086025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
tx.5533	chr17	-	3892	6	ISM	ENSMUSG00000036568.8	ENSMUST00000040624.7	6575	11	19219	492	-9	-492	3prime_fragment	FALSE	canonical	3	125	junction_4	7.22772439983706	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTTTTCTTCCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	47123120	47109537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849
tx.5534	chr17	-	2307	19	ISM	ENSMUSG00000023977.16	ENSMUST00000224759.2	6521	45	53760	-8	-4564	3	3prime_fragment	FALSE	canonical	3	102	junction_13	12.3827837473378	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGTTTTATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	47267645	47241165	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483
tx.5535	chr17	+	1017	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	2	-2	2	0	multi-exon	FALSE	canonical	3	977	junction_2	314.646892034018	333	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7139	False	NA	NA	False	NA	NA	NA	47679813	47689606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
tx.5536	chr17	+	1018	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119945.8	1018	7	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	381.394116659162	276	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7141	False	NA	NA	False	NA	NA	NA	47679815	47689606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
tx.5537	chr17	+	1670	4	FSM	ENSMUSG00000023979.15	ENSMUST00000024774.14	1668	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	16	junction_3	4.64279609239471	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTGTCCTGGAGGTGAA	1128	False	NA	NA	False	NA	NA	NA	47696315	47703892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_47696622_47700034_47700185_47701905_47702027_47702799
tx.5538	chr17	-	524	3	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	4870	0	4870	0	3prime_fragment	FALSE	canonical	3	65	junction_1	4	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAGTCTCAGCTTTTTT	6706	False	NA	NA	False	NA	NA	NA	47706639	47705482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_47705746_47706032_47706127_47706472
tx.5539	chr17	-	1268	2	NNC	ENSMUSG00000047150.9	novel	614	2	NA	NA	-700	-11	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	0	9	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTATTATTTCTGCCT	5854	False	NA	NA	False	NA	NA	NA	47733505	47723669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_47724820_47733387
tx.5540	chr17	+	1409	2	ISM	ENSMUSG00000034382.15	ENSMUST00000150819.3	4866	5	31507	496	31507	-2	3prime_fragment	FALSE	canonical	3	11	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTGGTTTGTGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	47779236	47781067	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_47779779_47780200
tx.5541	chr17	-	1263	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233174.2	1263	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	61.3926805449135	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTATTTATTATTATA	NA	False	NA	NA	False	NA	NA	NA	47813212	47794288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_47794760_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
tx.5542	chr17	-	2554	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	1	229	1	3	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGGCCTCTCAAATGGT	NA	False	NA	NA	False	NA	NA	NA	47813216	47799203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
tx.5543	chr17	-	1305	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	2	385	0	-385	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTACTATTCTGGTAGC	NA	False	NA	NA	False	NA	NA	NA	47813212	47803973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
tx.5544	chr17	+	1956	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	21	0	21	0	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	406	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	NA	NA	NA	47904415	47910614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
tx.5545	chr17	-	2183	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	255	1416	255	-1416	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTTGGTTTTTTA	2596	False	NA	NA	False	NA	NA	NA	47922162	47911671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
tx.5546	chr17	+	1880	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	7	167	4	3	multi-exon	FALSE	canonical	3	195	junction_2	32.2937902527543	391	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTTGGCCTTCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	47922513	47935176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
tx.5547	chr17	+	1466	5	FSM	ENSMUSG00000090115.8	ENSMUST00000152724.2	1443	5	-8	-15	-8	15	multi-exon	FALSE	canonical	3	25	junction_4	46.8794997840207	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCAGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	47983636	47991996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
tx.5548	chr17	+	1606	5	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	42033	5667	3	15	3prime_fragment	FALSE	canonical	3	71	junction_4	30.9141957682874	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCAGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	47983647	47991996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
tx.5549	chr17	-	531	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	126	92	11	2	multi-exon	FALSE	canonical	3	3748	junction_1	369	1627	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTATTTTATTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	47998982	47997662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_47997934_47998112_47998214_47998823
tx.5550	chr17	+	2170	7	NIC	ENSMUSG00000023266.12	novel	344	4	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	27.5242317482856	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	NA	NA	NA	47999921	48015210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_48000024_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
tx.5551	chr17	+	2117	7	FSM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	27	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	11.8988794990677	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGAGTGCTCTCGTCT	NA	False	NA	NA	False	NA	NA	NA	48006149	48015211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
tx.5552	chr17	+	1504	2	ISM	ENSMUSG00000023266.12	ENSMUST00000138316.2	1653	3	488	-1	488	1	3prime_fragment	FALSE	canonical	3	82	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	NA	NA	NA	48013477	48015210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_48013650_48013878
tx.5553	chr17	+	730	2	NNC	ENSMUSG00000023266.12	novel	1653	3	NA	NA	1145	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	NA	NA	NA	48014134	48015210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_48014315_48014660
tx.5554	chr17	+	640	2	NNC	ENSMUSG00000023266.12	novel	1653	3	NA	NA	1182	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCTCTCGTCTGTGC	NA	False	NA	NA	False	NA	NA	NA	48014171	48015215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_48014315_48014718
tx.5555	chr17	+	694	5	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3932	-1	3930	1	3prime_fragment	FALSE	canonical	3	133	junction_1	119.423615755009	113	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	NA	False	NA	NA	NA	48041698	48045408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
tx.5556	chr17	+	1586	4	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	4626	-1	4624	1	3prime_fragment	FALSE	canonical	3	283	junction_1	65.5303152916436	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	NA	False	NA	NA	NA	48042392	48045408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_48043430_48043885_48044037_48044681_48044781_48045109
tx.5557	chr17	+	802	3	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	5866	-1	5864	1	3prime_fragment	FALSE	canonical	3	421	junction_1	1	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	NA	False	NA	NA	NA	48043632	48045408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_48044037_48044681_48044781_48045109
tx.5558	chr17	+	2268	9	FSM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	71	3	71	0	multi-exon	FALSE	canonical	3	431	junction_4	27.2370955683604	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	NA	False	NA	NA	NA	48048025	48103341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
tx.5559	chr17	+	2331	9	NIC	ENSMUSG00000023990.19	novel	2296	8	NA	NA	787	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	141.519378090069	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	NA	False	NA	NA	NA	48050614	48103341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_48050894_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
tx.5560	chr17	+	1427	2	FSM	ENSMUSG00000051682.16	ENSMUST00000153131.2	513	2	-63	-851	-63	3	multi-exon	FALSE	canonical	1	2	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTCATACCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	48579403	48582391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_48579847_48581407
tx.5561	chr17	-	3696	10	FSM	ENSMUSG00000023994.14	ENSMUST00000046719.14	3645	10	-44	-7	-44	0	multi-exon	FALSE	canonical	3	12	junction_8	14.7832070227182	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	48716837	48693916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706097_48707465_48707609_48716653
tx.5562	chr17	-	3602	10	NIC	ENSMUSG00000023994.14	novel	3653	10	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	15	junction_8	14.6245185633537	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	48716764	48693916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706094_48707465_48707609_48716653
tx.5563	chr17	-	3589	9	FSM	ENSMUSG00000023994.14	ENSMUST00000162460.8	3706	9	117	0	-24	0	multi-exon	FALSE	canonical	3	22	junction_4	12.5492778676703	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	48716817	48693916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
tx.5564	chr17	+	1163	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	-35	7	31	5	multi-exon	FALSE	canonical	0	0	junction_5	381.26547181721	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	NA	False	NA	NA	NA	48717072	48724287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
tx.5565	chr17	+	1264	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	65	-5	-1	5	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	NA	False	NA	NA	NA	48717106	48724287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
tx.5566	chr17	+	1260	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	403.460233480327	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGAACGTCTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	48717121	48724295	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
tx.5567	chr17	-	889	2	ISM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	9505	-1	9193	1	3prime_fragment	FALSE	canonical	3	80	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGCCTGTTCTCTTAA	8291	False	NA	NA	False	NA	NA	NA	48730453	48726257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_48726662_48729968
tx.5568	chr17	-	1227	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	194	-1	-118	1	multi-exon	FALSE	canonical	3	57	junction_2	11.5	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGCCTGTTCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	48739764	48726257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_48726662_48729968_48730534_48739506
tx.5569	chr17	-	959	5	FSM	ENSMUSG00000023995.13	ENSMUST00000024794.12	956	5	-2	-1	-2	1	multi-exon	FALSE	canonical	3	26	junction_4	2.06155281280883	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGGTGTAAGGTGGAA	NA	False	NA	NA	False	NA	NA	NA	48758552	48755461	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_48755829_48756047_48756190_48756910_48757099_48757899_48758090_48758480
tx.5570	chr17	+	1819	6	ISM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	7475	0	-8	0	3prime_fragment	FALSE	canonical	3	16	junction_5	4.12795348811006	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTACTTTTGAATGGT	NA	False	NA	NA	False	NA	NA	NA	48769403	48775714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
tx.5571	chr17	-	2942	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	37	-3	0	1	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGACTTACTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	50600627	50586421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
tx.5572	chr17	-	2893	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGACTTACTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	50600629	50586421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
tx.5574	chr17	-	2633	8	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	156.691559753419	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTCAGTTGCCGCTTAC	NA	False	NA	NA	False	NA	NA	NA	53996301	53981817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_53983740_53986678_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
tx.5575	chr17	-	2322	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	38	1268	-9	-1268	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATGTGTGTATGTATG	NA	False	NA	NA	False	NA	NA	NA	53996323	53983081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
tx.5576	chr17	-	541	5	FSM	ENSMUSG00000024174.10	ENSMUST00000233301.2	1813	5	19	1253	-2	-1253	multi-exon	FALSE	canonical	3	16	junction_3	2.54950975679639	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCAGGCATCAATTAT	NA	False	NA	NA	False	NA	NA	NA	56019609	56005346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
tx.5577	chr17	-	2184	4	NNC	ENSMUSG00000057835.8	novel	2018	4	NA	NA	286	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	9.67241208569794	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTGGATAGCTGTATT	NA	False	NA	NA	False	NA	NA	NA	56185644	56171885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_56173651_56175302_56175364_56175558_56175686_56185413
tx.5578	chr17	-	2030	4	FSM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	17	junction_3	5.43650214343336	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTCTCTTGGATAGC	NA	False	NA	NA	False	NA	NA	NA	56185942	56171891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_56173651_56175302_56175364_56175558_56175686_56185859
tx.5579	chr17	+	2049	4	FSM	ENSMUSG00000003198.11	ENSMUST00000054780.10	2028	4	-17	-4	10	4	multi-exon	FALSE	canonical	3	9	junction_1	17.3781471969828	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTTATGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	56199102	56205932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56199187_56202820_56202948_56203140_56203202_56204155
tx.5580	chr17	+	2155	5	FSM	ENSMUSG00000003198.11	ENSMUST00000224379.2	895	5	10	-1270	10	7	multi-exon	FALSE	canonical	3	14	junction_1	13.1624465810882	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTATGTGTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56199102	56205935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56199187_56199757_56199861_56202820_56202948_56203140_56203202_56204155
tx.5581	chr17	+	2326	5	NNC	ENSMUSG00000003198.11	novel	705	4	NA	NA	-93	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	13.1624465810882	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTTATGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	56199374	56205932	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_56199633_56199757_56199861_56202820_56202948_56203140_56203202_56204155
tx.5582	chr17	-	1897	4	FSM	ENSMUSG00000062101.13	ENSMUST00000056147.14	1889	4	0	-8	0	8	multi-exon	FALSE	canonical	3	31	junction_3	5.90668171555645	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGTTGTCATTATTT	NA	False	NA	NA	False	NA	NA	NA	56252259	56245372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56252171
tx.5583	chr17	+	1702	8	NNC	ENSMUSG00000003208.10	novel	1660	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_2	40.3591023544521	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTCGTGTTGGAGTC	269	False	NA	NA	False	NA	NA	NA	56266098	56275281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_56266262_56267712_56267785_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
tx.5585	chr17	+	1694	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-34	0	-32	0	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGTGTTGGAGTCTGCT	310	False	NA	NA	False	NA	NA	NA	56266139	56275285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
tx.5586	chr17	+	1773	13	FSM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	-25	0	-23	0	multi-exon	FALSE	canonical	3	52	junction_12	6.07533721057706	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3908	False	NA	NA	False	NA	NA	NA	56293485	56303881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
tx.5589	chr17	+	1311	12	ISM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	341	122	209	15	3prime_fragment	FALSE	canonical	3	800	junction_1	72.3614663904886	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCTGGGGTGGGAT	NA	False	NA	NA	False	NA	NA	NA	56316541	56323668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
tx.559	chr1	+	1737	14	FSM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	3	0	3	0	multi-exon	FALSE	canonical	3	68	junction_2	20.0017750691572	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTTATTTCA	NA	False	NA	NA	False	NA	NA	NA	164135243	164264869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
tx.5590	chr17	+	1267	11	ISM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	1075	122	-164	15	3prime_fragment	FALSE	canonical	3	830	junction_3	65.4189574970436	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCTGGGGTGGGAT	NA	False	NA	NA	False	NA	NA	NA	56317275	56323668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
tx.5591	chr17	-	2117	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-26	0	intron_retention	FALSE	canonical	3	585	junction_1	56.6192050014834	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	NA	False	NA	NA	NA	56343602	56323749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
tx.5592	chr17	-	2044	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	29	0	29	0	multi-exon	FALSE	canonical	3	585	junction_1	54.5914116159513	111	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	NA	False	NA	NA	NA	56343606	56323749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
tx.5593	chr17	+	3330	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-38	2243	-38	-799	multi-exon	TRUE	canonical	3	392	junction_3	50.5723455079702	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGTCTCAACTATC	NA	False	NA	NA	False	NA	NA	NA	56347400	56375033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
tx.5594	chr17	+	2242	10	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	17290	2249	-14	-805	3prime_fragment	FALSE	canonical	3	402	junction_1	52.9593368352049	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	-1	True	NA	NA	NA	56364728	56375027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
tx.5595	chr17	+	1483	5	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	22392	2249	5088	-805	3prime_fragment	FALSE	canonical	3	461	junction_1	46.19185534269	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	56369830	56375027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
tx.5596	chr17	+	1420	4	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	22891	2249	5587	-805	3prime_fragment	FALSE	canonical	3	488	junction_1	42.2926313518876	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	56370329	56375027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_56370421_56371000_56371257_56371973_56372426_56374406
tx.5597	chr17	-	1716	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	28	1205	17	0	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCAGTGTTTCATCA	6334	False	NA	NA	False	NA	NA	NA	56382000	56375249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
tx.5598	chr17	+	2254	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	25	-9	21	3	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	56386658	56407601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
tx.5599	chr17	+	2249	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	3	combination_of_known_junctions	FALSE	canonical	3	309	junction_15	154.811225547618	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	56386660	56407601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
tx.56	chr1	-	2664	4	ISM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-86	27078	28	14	5prime_fragment	FALSE	canonical	3	122	junction_2	3.09120616516523	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTTTTGAAGCTGTTA	NA	False	NA	NA	False	NA	NA	NA	30912748	30868497	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_30870641_30876185_30876348_30902067_30902337_30912658
tx.560	chr1	+	1734	14	NIC	ENSMUSG00000026575.16	novel	1740	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	27.275061761302	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTTATTTCA	NA	False	NA	NA	False	NA	NA	NA	164135243	164264869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_164135324_164135628_164135820_164140424_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
tx.5600	chr17	+	1155	8	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	17619	-3	460	3	3prime_fragment	FALSE	canonical	3	635	junction_7	94.5651702719951	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	56404317	56407601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
tx.5601	chr17	+	597	3	ISM	ENSMUSG00000002833.12	ENSMUST00000224101.2	594	4	436	-219	194	3	3prime_fragment	FALSE	canonical	3	635	junction_2	129	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	56406174	56407601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_56406388_56406858_56406986_56407344
tx.5602	chr17	+	1448	2	FSM	ENSMUSG00000044469.9	ENSMUST00000077788.7	2379	2	13	918	13	-918	multi-exon	FALSE	canonical	2	6	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGGAGTTTACCAAA	426	False	NA	NA	False	NA	NA	NA	56469489	56480037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56469607_56478706
tx.5603	chr17	-	909	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	4	797	4	-797	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGATTCTCATCGTTTTC	NA	False	NA	NA	False	NA	NA	NA	56490916	56483540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
tx.5604	chr17	-	2153	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	0	1492	0	-1492	multi-exon	TRUE	canonical	3	548	junction_7	40.8821102534533	171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAAGTGGATGGTGTA	NA	False	NA	NA	False	NA	NA	NA	56597511	56585967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
tx.5605	chr17	+	3563	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	23	0	23	0	multi-exon	TRUE	canonical	3	1413	junction_6	319.856779473251	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	443	False	NA	NA	False	NA	NA	NA	56610343	56630486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
tx.5606	chr17	+	3480	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	-89	0	-54	0	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1358	False	NA	NA	False	NA	NA	NA	56611258	56630486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
tx.5607	chr17	+	2212	10	ISM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	10877	0	2562	0	3prime_fragment	FALSE	canonical	3	2127	junction_3	117.666299443347	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	8725	False	NA	NA	False	NA	NA	NA	56622224	56630486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
tx.5608	chr17	-	2763	19	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-26	0	intron_retention	FALSE	canonical	3	24	junction_13	56.9141653915985	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGCTGCCAGGCATT	NA	False	NA	NA	False	NA	NA	NA	56891611	56869938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
tx.5611	chr17	+	3183	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	-77	0	0	0	multi-exon	TRUE	canonical	3	422	junction_6	66.4862955803675	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	NA	False	NA	NA	NA	56891981	56913294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
tx.5612	chr17	-	543	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	43	169	43	-1	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	400	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCGGTTTTCTGGTGG	NA	False	NA	NA	False	NA	NA	NA	56916728	56914620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
tx.5613	chr17	+	389	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	-3	-3	-3	3	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	1273	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	56920412	56921246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
tx.5614	chr17	-	297	2	ISM	ENSMUSG00000041168.11	ENSMUST00000233732.2	4362	16	12210	0	12210	0	3prime_fragment	FALSE	canonical	3	804	junction_1	0	31	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	NA	False	NA	NA	False	NA	NA	NA	56921665	56921296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_56921564_56921635
tx.5615	chr17	-	1290	8	ISM	ENSMUSG00000041168.11	ENSMUST00000233732.2	4362	16	10424	0	10424	0	3prime_fragment	FALSE	canonical	3	752	junction_3	63.3577468162549	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	NA	False	NA	NA	False	NA	NA	NA	56923451	56921296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358
tx.5616	chr17	+	2406	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	-33	0	31	0	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	NA	NA	NA	56980324	57018764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
tx.5617	chr17	+	2697	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	-130	0	-59	0	multi-exon	FALSE	canonical	3	89	junction_2	111.513574706176	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	NA	NA	NA	56980234	57018764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
tx.5618	chr17	-	2089	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	137	0	137	0	multi-exon	FALSE	canonical	3	64	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTCTACCTTTTTTC	7705	False	NA	NA	False	NA	NA	NA	57023840	57020935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_57022818_57023633
tx.5619	chr17	+	553	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	2	-10	2	6	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	1050	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGCAGGCTTGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	57024768	57029147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
tx.5620	chr17	+	2051	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	-24	-2	-3	2	multi-exon	TRUE	canonical	3	220	junction_6	33.8230690505755	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATTTTGTTGGTTTT	9220	False	NA	NA	False	NA	NA	NA	57071753	57076843	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
tx.5621	chr17	+	2396	12	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1656	-2	1630	2	3prime_fragment	TRUE	canonical	3	15	junction_6	15.5260378474249	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCGCACCCCGAGGTAA	NA	False	NA	NA	False	NA	NA	NA	57184132	57195906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
tx.5622	chr17	+	698	4	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	8482	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	29.6797723860694	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCGCACCCCGAGGTAA	NA	False	NA	NA	False	NA	NA	NA	57190984	57195906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_57191026_57192083_57192224_57193440_57193688_57195636
tx.5623	chr17	+	697	3	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	9567	-2	9541	2	3prime_fragment	FALSE	canonical	3	57	junction_2	9	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCGCACCCCGAGGTAA	NA	False	NA	NA	False	NA	NA	NA	57192043	57195906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_57192224_57193440_57193688_57195636
tx.5624	chr17	+	987	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	428	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	NA	False	NA	NA	NA	57297300	57303188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
tx.5625	chr17	+	741	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	-4	180	0	5	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATCTTCAAATGACCGT	367	False	NA	NA	False	NA	NA	NA	57304338	57306142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
tx.5626	chr17	-	1830	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	-110	-3	-110	3	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCGAGTCATCACTG	NA	False	NA	NA	False	NA	NA	NA	57318398	57310401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
tx.5627	chr17	+	797	5	FSM	ENSMUSG00000044279.16	ENSMUST00000169543.8	778	5	-18	-1	-18	0	multi-exon	FALSE	canonical	3	51	junction_4	66.6520817379322	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1560	False	NA	NA	False	NA	NA	NA	57369264	57372918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089_57372234_57372608
tx.5628	chr17	+	1171	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	35	0	-17	0	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1561	False	NA	NA	False	NA	NA	NA	57369265	57372918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
tx.5629	chr17	+	1384	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	-25	-491	-9	0	multi-exon	FALSE	canonical	3	202	junction_2	10.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1569	False	NA	NA	False	NA	NA	NA	57369273	57372918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57369767_57370636_57370699_57372089
tx.563	chr1	-	1749	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	-5	2636	-5	660	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTTTGCTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	165064517	165042490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
tx.5630	chr17	-	1383	8	NIC	ENSMUSG00000002668.9	novel	2521	24	NA	NA	1021	4	combination_of_known_junctions	TRUE	canonical	3	18	junction_2	6.23027499638758	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCTGGGGCTTTCTGAA	NA	False	NA	NA	False	NA	NA	NA	57377776	57373050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_57373642_57373731_57373943_57374048_57374117_57374592_57374701_57374788_57374834_57377112_57377185_57377407_57377449_57377529
tx.5631	chr17	+	1323	3	FSM	ENSMUSG00000035678.9	ENSMUST00000039490.9	1290	3	-27	-6	-27	6	multi-exon	FALSE	canonical	2	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTATTTTCCTTG	-2	True	NA	NA	False	NA	NA	NA	57412297	57414763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57412861_57413249_57413287_57414040
tx.5632	chr17	-	2132	17	FSM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	-6	279	-6	30	multi-exon	FALSE	canonical	3	119	junction_12	26.3293443708726	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCGGAGCCCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	57554678	57541913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
tx.5633	chr17	-	2112	17	FSM	ENSMUSG00000005823.10	ENSMUST00000005975.8	2064	17	10	-58	-7	30	multi-exon	FALSE	canonical	3	88	junction_12	32.0784560686764	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCGGAGCCCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	57554679	57541913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
tx.5634	chr17	+	2009	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	-27	242	0	-4	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTCTTGGAGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	57556454	57570423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
tx.5635	chr17	+	2017	14	FSM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	-5	4	-5	-4	multi-exon	FALSE	canonical	3	136	junction_12	68.855048845232	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTCTTGGAGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	57556449	57570423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
tx.5636	chr17	-	3574	7	FSM	ENSMUSG00000024228.13	ENSMUST00000025065.12	4113	7	50	489	50	4	multi-exon	FALSE	canonical	3	48	junction_4	5.17740818900302	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGTGTATTGTGTG	NA	False	NA	NA	False	NA	NA	NA	59320317	59307101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
tx.5637	chr17	+	2779	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-13	14	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	24.9886393940413	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGCAACCCTGCCATTT	NA	False	NA	NA	False	NA	NA	NA	64170996	64446206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
tx.5638	chr17	-	3913	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	35	792	6	-777	multi-exon	FALSE	canonical	3	104	junction_6	24	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGCTGTGTAACAAGCCA	NA	False	NA	NA	False	NA	NA	NA	64638876	64588791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
tx.5639	chr17	-	2109	4	ISM	ENSMUSG00000024083.17	ENSMUST00000232842.2	3559	5	5	12157	5	-12157	5prime_fragment	FALSE	canonical	3	161	junction_1	4.92160768674447	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAATGTTGAGGTTGTC	NA	False	NA	NA	False	NA	NA	NA	64638877	64614958	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_64616662_64618165_64618367_64619995_64620114_64638790
tx.5640	chr17	+	1139	2	Antisense	novelGene_ENSMUSG00000073377.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	64841637	64843392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_+_64841801_64842416
tx.5641	chr17	+	1038	2	Antisense	novelGene_ENSMUSG00000073377.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	64841666	64843390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_+_64841731_64842416
tx.5642	chr17	-	1419	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	224	1726	224	367	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTGTGTCTGTCATG	3187	False	NA	NA	False	NA	NA	NA	65920326	65887047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
tx.5643	chr17	-	2364	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	157	1290	157	122	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGAGTGGCTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	66191792	66156702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
tx.5644	chr17	-	3709	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	440	-350	-404	2	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTCTATTGTCCACTCT	NA	False	NA	NA	False	NA	NA	NA	66192353	66155410	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
tx.5645	chr17	-	686	3	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	143	16062	143	212	5prime_fragment	FALSE	canonical	3	383	junction_2	139.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAGAAAAAGCCAA	NA	False	NA	NA	False	NA	NA	NA	66191806	66171474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_66171728_66174526_66174826_66191672
tx.5646	chr17	-	684	3	ISM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	476	15719	-368	207	5prime_fragment	FALSE	canonical	3	126	junction_2	268	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	66192317	66171479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_66171728_66174526_66174826_66192180
tx.5647	chr17	-	746	3	NIC	ENSMUSG00000024096.18	novel	481	2	NA	NA	-72	152	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	319.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGAAAAGAAATCGAAAG	NA	False	NA	NA	False	NA	NA	NA	66191470	66171534	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_66171728_66174526_66174826_66191216
tx.5648	chr17	-	2456	9	ISM	ENSMUSG00000034647.16	ENSMUST00000038116.13	10821	13	7	20517	4	807	5prime_fragment	FALSE	canonical	2	19	junction_6	22.0383189014044	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACTAAAAAGGAAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	66384061	66293209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
tx.5649	chr17	-	2296	8	FSM	ENSMUSG00000034647.16	ENSMUST00000150766.2	1513	8	-35	-748	13	725	multi-exon	FALSE	canonical	3	23	junction_1	22.2481368171974	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAAAAAACATGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	66384052	66293291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
tx.565	chr1	+	761	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	170	94	-17	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	NA	False	NA	NA	NA	165288775	165308689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
tx.5650	chr17	-	1311	4	FSM	ENSMUSG00000034647.16	ENSMUST00000135136.8	943	4	-27	-341	4	0	multi-exon	FALSE	canonical	3	24	junction_1	25.5734237050888	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATCTGTGTGTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	66384061	66343792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_66344635_66356780_66356929_66359948_66360087_66383878
tx.5651	chr17	-	1030	5	FSM	ENSMUSG00000034647.16	ENSMUST00000129756.8	1403	5	35	338	-10	3	multi-exon	FALSE	canonical	2	19	junction_2	27.5170401751351	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTAGGAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	66384049	66344130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
tx.5652	chr17	-	847	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	50	800	0	3	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	938	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTTATTCGGTTTGCT	5502	False	NA	NA	False	NA	NA	NA	66408504	66386432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
tx.5653	chr17	+	1821	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	29	1055	21	1	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	66418568	66426443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
tx.5654	chr17	+	1844	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	-12	-1	-12	1	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	66418627	66426443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
tx.5655	chr17	-	605	2	ISM	ENSMUSG00000052105.18	ENSMUST00000134139.8	2423	6	24768	-8	-7618	8	3prime_fragment	FALSE	canonical	3	214	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	66661158	66654952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_66655517_66661117
tx.5657	chr17	-	775	3	FSM	ENSMUSG00000100572.2	ENSMUST00000187090.2	764	3	-3	-8	-3	8	multi-exon	FALSE	canonical	3	43	junction_1	7	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAACGTATGTCCTGACT	NA	False	NA	NA	False	NA	NA	NA	69584206	69582348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_69582902_69583120_69583191_69584054
tx.5658	chr17	+	3031	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	40	554	40	-554	multi-exon	FALSE	canonical	3	64	junction_1	68.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTACTAACATCTGTTA	NA	False	NA	NA	False	NA	NA	NA	69690353	69697191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_69690416_69692415_69692500_69694306
tx.566	chr1	-	1653	3	ISM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	29811	0	1035	0	3prime_fragment	TRUE	canonical	3	372	junction_2	16	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	165432287	165419808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_165421247_165429318_165429425_165432178
tx.5660	chr17	-	837	3	Antisense	novelGene_ENSMUSG00000003279.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	2.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGTTTGGGGGCAAAT	NA	False	NA	NA	False	NA	NA	NA	71130730	71125664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_-_71125929_71126393_71126694_71130457
tx.5661	chr17	+	563	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	-36	-142	-36	142	multi-exon	FALSE	canonical	3	64	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTCTATCTTTTTTTT	244	False	NA	NA	False	NA	NA	NA	71141622	71143181	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_71141798_71142793
tx.5662	chr17	-	1628	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	-3	6	-3	0	multi-exon	FALSE	canonical	3	373	junction_2	253.5	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	NA	False	NA	NA	NA	71158205	71151205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_71152268_71153166_71153394_71157866
tx.5663	chr17	-	1367	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	21	0	21	0	multi-exon	FALSE	canonical	3	296	junction_2	292	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	NA	False	NA	NA	NA	71160520	71151205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_71152268_71153166_71153394_71160442
tx.5664	chr17	-	972	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	348	823	-12	70	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	231	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGCTGACTCAAGTGG	3392	False	NA	NA	False	NA	NA	NA	71297537	71280950	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
tx.5665	chr17	-	957	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	343	637	-24	1	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	1629	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTGTTTAGCGTTAT	2270	False	NA	NA	False	NA	NA	NA	71309206	71301287	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
tx.5666	chr17	-	1298	4	NNC	ENSMUSG00000024053.12	novel	3939	8	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	6.59966329107444	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTTTTCTGTATTTGG	NA	False	NA	NA	False	NA	NA	NA	71563369	71559166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_71560089_71562113_71562243_71562974_71563008_71563155
tx.5667	chr17	-	1149	4	ISM	ENSMUSG00000024053.12	ENSMUST00000233148.2	758	5	12209	-845	-42	0	3prime_fragment	FALSE	canonical	2	7	junction_2	4.49691252107735	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTTTTCTGTATTTGG	NA	False	NA	NA	False	NA	NA	NA	71563383	71559166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318
tx.5668	chr17	-	2168	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	32	1	-18	-1	multi-exon	TRUE	canonical	3	248	junction_10	48.8427003246135	194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCCCCTCCCATTTCT	NA	False	NA	NA	False	NA	NA	NA	71833820	71803095	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
tx.5669	chr17	-	1212	4	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	-10	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.8807492274273	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTTACTGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	71905760	71895507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_71895980_71897482_71897518_71898852_71898942_71905144
tx.567	chr1	-	1547	2	ISM	ENSMUSG00000026566.16	ENSMUST00000191818.6	853	5	4828	-1170	1035	0	3prime_fragment	FALSE	canonical	3	343	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	165432287	165419808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_165421247_165432178
tx.5670	chr17	-	1335	3	FSM	ENSMUSG00000085492.8	ENSMUST00000143828.2	781	3	-510	-44	-8	44	multi-exon	FALSE	canonical	3	25	junction_2	30	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTTACTGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	71905758	71895507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_71895980_71897482_71897518_71904930
tx.5671	chr17	-	1084	3	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	31	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATTTTTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	71905762	71895548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_71895980_71897482_71897518_71905144
tx.5672	chr17	+	3431	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	14	5	14	-5	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	313	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCGCGTGTCTCGTGGT	NA	False	NA	NA	False	NA	NA	NA	71923223	71966021	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
tx.5673	chr17	+	3001	16	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	10591	7	-9749	-7	3prime_fragment	FALSE	canonical	3	1341	junction_5	112.751920407395	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGCGCGTGTCTCGTG	NA	False	NA	NA	False	NA	NA	NA	71933800	71966019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
tx.5674	chr17	+	1770	15	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	13974	1121	-6366	-68	3prime_fragment	FALSE	canonical	3	1341	junction_4	116.099622949343	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACATGAGTGTCCAATAT	NA	False	NA	NA	False	NA	NA	NA	71937183	71964905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
tx.5675	chr17	+	1205	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	231	1684	231	677	multi-exon	FALSE	canonical	3	244	junction_1	49	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCCTCTGTTACTTTTA	976	False	NA	NA	False	NA	NA	NA	73143678	73156506	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_73143787_73153273_73153439_73155574
tx.5676	chr17	+	1336	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	41	-673	41	673	multi-exon	FALSE	canonical	3	29	junction_1	156.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	1869	False	NA	NA	False	NA	NA	NA	73144571	73156502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_73144815_73153273_73153439_73155574
tx.5677	chr17	+	1216	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	273	930	50	673	multi-exon	FALSE	canonical	3	101	junction_1	120.5	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	1878	False	NA	NA	False	NA	NA	NA	73144580	73156502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_73144704_73153273_73153439_73155574
tx.5678	chr17	+	697	3	FSM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	0	2372	0	230	multi-exon	FALSE	canonical	2	4	junction_1	4	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGAGTCGGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	73225299	73246570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_73225574_73228182_73228286_73246250
tx.5679	chr17	+	3184	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	44	1239	44	-1239	multi-exon	FALSE	canonical	3	22	junction_1	24.2866218317822	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTTCTTACCTACAC	NA	False	NA	NA	False	NA	NA	NA	73415032	73549124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
tx.568	chr1	-	1822	3	FSM	ENSMUSG00000026566.16	ENSMUST00000194437.6	643	3	-6	-1173	2	0	multi-exon	FALSE	canonical	3	25	junction_1	400.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	165462088	165419808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_165421247_165436006_165436174_165461871
tx.5680	chr17	-	1496	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	1	1666	1	0	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	NA	NA	NA	74601857	74507696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
tx.5681	chr17	-	1753	10	NIC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	16	282	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	80.0302411977675	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTTATTCCTTTCCTC	NA	False	NA	NA	False	NA	NA	NA	74602475	74507414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
tx.5682	chr17	-	690	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	6	-2	6	2	multi-exon	FALSE	canonical	3	2414	junction_1	149.934059580278	152	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTTGTTGTATATG	NA	False	NA	NA	False	NA	NA	NA	74623192	74606474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
tx.5683	chr17	-	686	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	42	6	-13	2	multi-exon	FALSE	canonical	3	1923	junction_4	306.562391692132	686	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTTGTTGTATATG	NA	False	NA	NA	False	NA	NA	NA	74623416	74606474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
tx.5684	chr17	+	1920	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	13	215	0	-3	multi-exon	TRUE	canonical	3	152	junction_5	21.3572043468894	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGTGAGGTATATTCT	NA	False	NA	NA	False	NA	NA	NA	74702615	74731001	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
tx.5685	chr17	+	1290	4	ISM	ENSMUSG00000024072.10	ENSMUST00000234432.2	1991	7	4454	-12	76	12	3prime_fragment	FALSE	canonical	3	423	junction_2	44.5645599103144	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATACCTTGTCCTATATTA	NA	False	NA	NA	False	NA	NA	NA	74800998	74806967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_74801095_74803584_74803663_74805303_74805418_74805965
tx.5686	chr17	-	407	3	NNC	ENSMUSG00000117358.2	novel	327	3	NA	NA	224	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCATTGGTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	74834415	74826662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_74826911_74830509_74830574_74834320
tx.5687	chr17	+	2818	20	FSM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	20	0	-10	0	multi-exon	FALSE	canonical	3	124	junction_5	16.0728948897983	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	NA	False	NA	NA	NA	75024746	75170565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
tx.5688	chr17	+	2812	20	FSM	ENSMUSG00000024078.8	ENSMUST00000234568.2	2651	20	-157	-4	-7	0	multi-exon	FALSE	canonical	3	41	junction_19	29.4919116570221	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	NA	False	NA	NA	NA	75024749	75170565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170331
tx.5689	chr17	+	1370	4	FSM	ENSMUSG00000024078.8	ENSMUST00000234751.2	644	4	-2	-724	-2	724	multi-exon	FALSE	canonical	3	6	junction_3	63.6605581711837	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGTTTCTGTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	75024754	75031392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75030582
tx.569	chr1	-	2283	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	2	0	2	0	multi-exon	FALSE	canonical	3	372	junction_2	205.630737002035	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	165462096	165419808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
tx.5690	chr17	-	2754	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	56	7	-17	2	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGCTCTGGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	75858885	75844087	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
tx.5691	chr17	-	1918	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	22	-1	-13	1	multi-exon	FALSE	canonical	3	258	junction_3	15.727267365169	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGAGTCTTGAGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	78725538	78685312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
tx.5692	chr17	-	1733	6	ISM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	20	6118	-15	-6117	5prime_fragment	FALSE	canonical	3	258	junction_1	18.0731845561318	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTATAGTAAATAAATTCT	NA	False	NA	NA	False	NA	NA	NA	78725540	78691431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
tx.5693	chr17	+	1232	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-50	2952	-28	-2	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTACAAGTGATGTGGCA	8802	False	NA	NA	False	NA	NA	NA	79142967	79152785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
tx.5694	chr17	+	398	3	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	6538	2952	-1467	-2	3prime_fragment	FALSE	canonical	3	104	junction_2	9.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTACAAGTGATGTGGCA	NA	False	NA	NA	False	NA	NA	NA	79149555	79152785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_79149659_79151247_79151330_79152572
tx.5695	chr17	-	2375	16	FSM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	-3	1941	-3	849	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAATAGGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	79190005	79161933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
tx.5696	chr17	-	777	5	FSM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	-1	-12	-1	12	multi-exon	FALSE	canonical	3	72	junction_4	54.3570372628973	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGTCAGTGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	79202530	79192313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202464
tx.5697	chr17	-	1144	4	ISM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	-2	-12	-2	12	intron_retention	FALSE	canonical	3	141	junction_3	32.273139846559	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGTCAGTGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	79202531	79192313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971
tx.5698	chr17	+	616	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	164	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	79223914	79227735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
tx.5699	chr17	+	742	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	11	0	11	0	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	79223956	79227735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
tx.57	chr1	-	1171	8	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	241	2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	107.409572788139	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCAAGTGGGAGTCTT	8818	False	NA	NA	False	NA	NA	NA	33660982	33492888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33660914
tx.570	chr1	-	2177	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	-6	0	2	0	multi-exon	FALSE	canonical	3	343	junction_1	201.827896981562	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	165462096	165419808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
tx.5700	chr17	+	578	4	ISM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	1838	0	1655	0	3prime_fragment	FALSE	canonical	3	1564	junction_2	26.0298973404728	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	79225783	79227735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_79225902_79226484_79226530_79227187_79227273_79227405
tx.5701	chr17	-	2218	15	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	1932	727	1903	112	3prime_fragment	FALSE	canonical	3	465	junction_13	59.7598937244636	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATTACACAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	79242563	79227161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003
tx.5702	chr17	-	1285	13	ISM	ENSMUSG00000024081.10	ENSMUST00000233484.2	2920	16	5673	-99	-5384	99	3prime_fragment	FALSE	canonical	3	573	junction_9	40.5020575609026	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	NA	False	NA	NA	NA	79238797	79227174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738
tx.5703	chr17	-	3328	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	2	740	2	99	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	245	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	NA	False	NA	NA	NA	79244493	79227174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
tx.5704	chr17	-	2915	13	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	3	2628	3	545	5prime_fragment	FALSE	canonical	3	465	junction_10	53.7154927992536	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAAATACATGCGCTCT	NA	False	NA	NA	False	NA	NA	NA	79244492	79229062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
tx.5705	chr17	-	1205	2	ISM	ENSMUSG00000024081.10	ENSMUST00000233484.2	2920	16	-23	15208	2	164	5prime_fragment	FALSE	canonical	3	619	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAGATCCTCAGAACAGA	NA	False	NA	NA	False	NA	NA	NA	79244493	79242481	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_79243497_79244303
tx.5706	chr17	+	1529	2	FSM	ENSMUSG00000024082.6	ENSMUST00000233138.2	514	2	-21	-994	1	994	multi-exon	FALSE	canonical	3	397	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGAAAAAGGTGG	NA	False	NA	NA	False	NA	NA	NA	79244566	79246384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_79244631_79244919
tx.5707	chr17	+	1417	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	2	330	1	-4	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	350	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTTTTCAAACTAGTAT	NA	False	NA	NA	False	NA	NA	NA	79244566	79254598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
tx.5708	chr17	+	1925	9	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	118	-5	-62	5	3prime_fragment	FALSE	canonical	3	388	junction_5	38.719948024242	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTCCTTATCAACTTAC	NA	False	NA	NA	False	NA	NA	NA	79244682	79254933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
tx.5709	chr17	-	3638	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-23	-541	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTGTTTAATATATTTA	NA	False	NA	NA	False	NA	NA	NA	79328268	79277588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
tx.5710	chr17	+	1725	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	338	-4	56	4	multi-exon	TRUE	canonical	3	226	junction_1	6.47216261298253	243	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAACTATTGCCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	79359672	79397811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
tx.5711	chr17	+	1574	6	FSM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	58	-159	58	2	multi-exon	FALSE	canonical	3	32	junction_1	82.0351144327842	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATAACTATTGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	79359674	79397809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_79359818_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
tx.5712	chr17	-	1985	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	0	280	0	-280	multi-exon	FALSE	canonical	3	71	junction_1	0	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTTATTGCAAAGTCTA	NA	False	NA	NA	False	NA	NA	NA	79662520	79641435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_79643146_79662245
tx.5713	chr17	-	1871	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10259	-287	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGCTTTTTATTGCA	NA	False	NA	NA	False	NA	NA	NA	79650177	79641442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_79643146_79650009
tx.5714	chr17	-	1645	2	ISM	ENSMUSG00000059811.14	ENSMUST00000223273.2	3968	4	3177	671	-198	0	3prime_fragment	FALSE	canonical	3	341	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	80160382	80156491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_80157708_80159953
tx.5715	chr17	-	2430	11	ISM	ENSMUSG00000059811.14	ENSMUST00000112437.8	3371	12	31002	671	-8991	0	3prime_fragment	TRUE	canonical	3	301	junction_5	38.8638649647716	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	1261	False	NA	NA	False	NA	NA	NA	80172550	80156491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470
tx.5716	chr17	-	2878	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	67	673	-5	0	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3818	False	NA	NA	False	NA	NA	NA	80203485	80156491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
tx.5717	chr17	-	2974	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	7	28	7	-28	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTGTTTCTTTCTCTT	3577	False	NA	NA	False	NA	NA	NA	80369649	80336943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
tx.5718	chr17	-	2093	12	ISM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	8585	346	8493	4	3prime_fragment	FALSE	canonical	0	0	junction_9	163.83830973108	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCATCTTCATTATTT	NA	False	NA	NA	False	NA	NA	NA	80361071	80337261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951
tx.5719	chr17	+	2315	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	0	-1	0	1	multi-exon	FALSE	canonical	3	126	junction_3	8.09149072929224	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTCTTGTTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	80434899	80492531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
tx.572	chr1	+	899	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	18	1246	18	144	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGAGAAAAATGCCATTC	NA	False	NA	NA	False	NA	NA	NA	165591332	165601631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
tx.5720	chr17	-	2276	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	-2	-1234	0	-3	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	1672	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTGATATTCAGTCTT	NA	False	NA	NA	False	NA	NA	NA	80514734	80507511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
tx.5721	chr17	-	2252	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTGATATTCAGTCTT	NA	False	NA	NA	False	NA	NA	NA	80514734	80507511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
tx.5722	chr17	-	2236	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	782.029553292088	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAATCCTGATATTCAG	NA	False	NA	NA	False	NA	NA	NA	80514734	80507515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
tx.5723	chr17	+	1087	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	25	22	25	-22	multi-exon	FALSE	canonical	3	317	junction_1	34	281	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTTTCGGGTTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	80531894	80535904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_80532100_80533049_80533194_80535166
tx.5724	chr17	+	1288	2	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTATGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	80540175	80550340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_+_80540458_80549334
tx.5725	chr17	+	631	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	16	-3	16	0	multi-exon	FALSE	canonical	3	50	junction_3	10.1242283656583	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGAATTATGTATTG	NA	False	NA	NA	False	NA	NA	NA	80597656	80604905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
tx.5726	chr17	-	2487	14	ISM	ENSMUSG00000024242.16	ENSMUST00000234585.2	3769	19	11017	-3	11017	-2	3prime_fragment	FALSE	canonical	3	234	junction_13	21.2572298873867	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	NA	False	NA	NA	NA	80921398	80887942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343
tx.5727	chr17	-	1865	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	-27	-5	-12	5	multi-exon	FALSE	canonical	3	99	junction_3	16.3940669785982	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTATAGACTCTTGTG	8137	False	NA	NA	False	NA	NA	NA	81372523	81333755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
tx.5728	chr17	-	1068	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	0	8	0	-8	multi-exon	TRUE	canonical	0	0	junction_1	644	1373	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTAGTTTGTTTGTTT	9947	False	NA	NA	False	NA	NA	NA	83821759	83809354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_83810167_83811528_83811658_83821632
tx.5729	chr17	+	1669	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	58	-4	30	2	multi-exon	FALSE	canonical	3	649	junction_11	147.297388673592	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84013649	84100306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
tx.573	chr1	+	2335	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	180	0	1	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	NA	False	NA	NA	NA	165957986	165994079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
tx.5730	chr17	+	651	8	ISM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	64	26349	36	12656	5prime_fragment	FALSE	canonical	3	933	junction_3	95.0540125724446	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGCCCTGGACTGCAGCA	NA	False	NA	NA	False	NA	NA	NA	84013655	84073953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935
tx.5731	chr17	+	1375	13	FSM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	-26	5	-26	-5	multi-exon	FALSE	canonical	3	61	junction_6	7.6412622575651	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCAACATCTAAGTATAA	NA	False	NA	NA	False	NA	NA	NA	84933897	84963011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
tx.5732	chr17	+	1868	5	ISM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	36006	81	325	-81	3prime_fragment	FALSE	canonical	3	718	junction_4	374.08855903382	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTCTCAGTTTCCACTT	NA	False	NA	NA	False	NA	NA	NA	85301432	85322038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
tx.5733	chr17	+	2543	5	ISM	ENSMUSG00000061130.14	ENSMUST00000234851.2	1307	7	325	6651	325	-69	5prime_fragment	FALSE	canonical	3	708	junction_4	378.362921016317	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACATATTACTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	85301432	85324556	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
tx.5734	chr17	-	2768	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-32	-2	-15	1	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTGTAATTTTGCT	NA	False	NA	NA	False	NA	NA	NA	85397684	85371955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
tx.5735	chr17	-	2224	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-27	1058	-7	1	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTGTAATTTTGCT	NA	False	NA	NA	False	NA	NA	NA	85397676	85371955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
tx.5736	chr17	-	2335	15	NIC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	52.4877050715067	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	NA	False	NA	NA	NA	85397685	85371956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85395871_85397533
tx.5737	chr17	-	1647	6	FSM	ENSMUSG00000024127.16	ENSMUST00000234036.2	1625	6	-6	-16	4	16	multi-exon	FALSE	canonical	3	151	junction_4	17.1043854025802	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTTAAGTTACTGG	NA	False	NA	NA	False	NA	NA	NA	85397665	85385470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
tx.5738	chr17	+	477	3	ISM	ENSMUSG00000071037.7	ENSMUST00000234822.2	741	4	20	89173	20	-52660	5prime_fragment	FALSE	canonical	3	95	junction_2	7	31	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTATGCTCACTATG	2247	False	NA	NA	False	NA	NA	NA	85398053	85421276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_85398292_85403917_85404091_85421210
tx.5739	chr17	+	1046	8	ISM	ENSMUSG00000071037.7	ENSMUST00000095188.7	1595	11	301021	-1	299490	1	3prime_fragment	TRUE	canonical	3	62	junction_3	5.28764443523479	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTCAATCTATCG	7751	False	NA	NA	False	NA	NA	NA	85699000	85766017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85738898_85738974_85746954_85747019_85759623_85759756_85765489
tx.574	chr1	+	1944	5	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	24505	0	intron_retention	FALSE	canonical	3	12	junction_1	75.0083328704218	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	NA	False	NA	NA	NA	165982540	165994079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_165982709_165985081_165985238_165991341_165991462_165992148_165992285_165992715
tx.5740	chr17	-	3516	21	FSM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	14	0	14	0	multi-exon	FALSE	canonical	3	77	junction_9	11.0027269347194	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTGCTGTTCATTG	NA	False	NA	NA	False	NA	NA	NA	86452589	86292092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
tx.5741	chr17	-	879	6	NNC	ENSMUSG00000024145.7	novel	988	6	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	135.20562118492	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	87332814	87304683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331253_87332725
tx.5742	chr17	-	968	6	FSM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	20	0	20	0	multi-exon	FALSE	canonical	3	301	junction_5	28.3760462362183	290	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	87332814	87304683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
tx.5743	chr17	+	1144	5	FSM	ENSMUSG00000024146.10	ENSMUST00000160269.2	763	5	-44	-337	17	-1	multi-exon	FALSE	canonical	2	8	junction_1	278.799210902757	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTGTGTCTTCAATGA	NA	False	NA	NA	False	NA	NA	NA	87332994	87343237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_87333082_87335126_87335193_87338435_87338491_87341683_87341788_87342405
tx.5744	chr17	+	1163	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	21	0	21	0	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	467	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTCTTCAATGAT	NA	False	NA	NA	False	NA	NA	NA	87332998	87343238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
tx.5745	chr17	-	1806	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	17	215	-14	0	multi-exon	FALSE	canonical	3	165	junction_3	69.8108555710038	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	NA	False	NA	NA	NA	87573346	87562085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
tx.5746	chr17	-	1781	4	NNC	ENSMUSG00000024150.13	novel	2017	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.196769288218	24	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	NA	False	NA	NA	NA	87573369	87562085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_87563486_87564574_87564735_87565355_87565518_87573310
tx.5747	chr17	-	1172	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	33	0	33	0	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	752	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	NA	False	NA	NA	NA	87754330	87740839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
tx.5748	chr17	+	569	3	ISM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	9608	229	9608	-206	3prime_fragment	FALSE	canonical	3	244	junction_1	1.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTCTAAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	87953717	87958328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_87953769_87957041_87957087_87957855
tx.5749	chr17	+	828	4	ISM	ENSMUSG00000024151.14	ENSMUST00000173097.8	2502	10	-40	26770	-19	-2928	5prime_fragment	FALSE	canonical	3	1646	junction_2	25.7725090401036	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATAAATAGTGCTGCCCT	4852	False	NA	NA	False	NA	NA	NA	87979948	87990066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958
tx.575	chr1	-	1542	12	FSM	ENSMUSG00000040629.9	ENSMUST00000038782.4	1546	12	4	0	4	0	multi-exon	FALSE	canonical	3	15	junction_10	4.55453638177285	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCACTCTTGCTTGTT	NA	False	NA	NA	False	NA	NA	NA	166066309	166028953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_166029305_166029843_166029920_166032358_166032492_166033421_166033485_166053158_166053301_166053405_166053461_166054134_166054260_166061733_166061776_166062969_166063126_166064441_166064542_166065831_166065925_166066103
tx.5750	chr17	+	1573	8	ISM	ENSMUSG00000024151.14	ENSMUST00000173097.8	2502	10	-53	12705	-32	0	5prime_fragment	FALSE	canonical	3	1629	junction_6	24.7732574707947	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTTGTATTTTTTTG	4839	False	NA	NA	False	NA	NA	NA	87979935	88004131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922
tx.5751	chr17	+	3090	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	193	0	-17	0	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4854	False	NA	NA	False	NA	NA	NA	87979950	88031141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
tx.5752	chr17	+	882	4	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	46401	0	22190	0	3prime_fragment	FALSE	canonical	3	1932	junction_3	24.3082062046727	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	NA	False	NA	NA	False	NA	NA	NA	88026158	88031141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_88026234_88026715_88026964_88028310_88028487_88030758
tx.5753	chr17	+	2709	2	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	22192	0	intron_retention	FALSE	canonical	3	1932	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	NA	False	NA	NA	False	NA	NA	NA	88026160	88031141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_88028487_88030758
tx.5754	chr17	+	2734	4	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	0	4427	0	1686	5prime_fragment	FALSE	canonical	3	2207	junction_2	20.0720922897661	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAAGCAGGTTGTTACT	NA	False	NA	NA	False	NA	NA	NA	88282489	88293893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873
tx.5755	chr17	+	4251	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	0	0	0	0	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	88282489	88298320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
tx.5756	chr17	+	3079	7	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	9842	0	5201	0	3prime_fragment	FALSE	canonical	3	2616	junction_4	121.673972383397	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	88292331	88298320	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
tx.5757	chr17	+	507	2	ISM	ENSMUSG00000034998.19	ENSMUST00000134107.2	2892	3	-45	15022	2	10	5prime_fragment	FALSE	canonical	3	288	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAACTTCAAAGCCCCC	NA	False	NA	NA	False	NA	NA	NA	88748140	88770475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_+_88748313_88770140
tx.5758	chr17	+	3082	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	59	0	-39	0	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCGGTCTGTGACAGTG	NA	False	NA	NA	False	NA	NA	NA	88837604	88895795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
tx.5759	chr17	-	765	4	Antisense	novelGene_ENSMUSG00000033855.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	14.6590889515307	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCCTCCTTTGATGCCTT	NA	False	NA	NA	False	NA	NA	NA	88932933	88923784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr17_-_88924018_88928723_88928829_88930105_88930383_88932783
tx.576	chr1	+	1945	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	270	0	28	0	multi-exon	FALSE	canonical	3	160	junction_4	12.2357789173508	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTTCCTGTTTATTCAA	NA	False	NA	NA	False	NA	NA	NA	166206935	166221190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
tx.5760	chr17	+	1516	7	NIC	ENSMUSG00000024154.12	novel	1621	9	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.74535599249993	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACACATTTACAACATAGT	NA	False	NA	NA	False	NA	NA	NA	88976051	89022580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_88976160_88978621_88978724_88978926_88979048_89001530_89002097_89018868_89019127_89019783_89019874_89022309
tx.5761	chr17	-	1680	8	ISM	ENSMUSG00000055660.10	ENSMUST00000234990.2	6640	9	1783	4496	1783	-1	3prime_fragment	FALSE	canonical	3	71	junction_6	15.5261464790783	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTTATAGTGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	95055537	95034513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044
tx.5762	chr17	+	1138	9	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	51.4192327830745	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTGTCCCCTCCCAT	NA	False	NA	NA	False	NA	NA	NA	95057518	95082560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95069889_95070049_95071199_95071311_95074284_95074376_95078561_95078667_95079284_95079389_95082319
tx.5763	chr17	+	1182	9	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	47.0790558528949	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGTCCCCTCCCATTT	NA	False	NA	NA	False	NA	NA	NA	95057518	95082562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
tx.5764	chr17	+	394	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-9	19018	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	77.6831169989121	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	NA	False	NA	NA	NA	95057518	95101578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_95057661_95063861_95063952_95092912_95092951_95101454
tx.5765	chr17	+	367	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19018	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_3	26.8493740874697	36	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	NA	False	NA	NA	NA	95057530	95101578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_95057661_95063861_95063952_95092912_95092936_95101454
tx.5766	chr17	+	456	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-3	19018	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	29.2232783924049	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	NA	False	NA	NA	NA	95057536	95101578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95101454
tx.5767	chr17	+	1064	8	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	3	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	36.7106724180824	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCCCCTCCCATTTC	NA	False	NA	NA	False	NA	NA	NA	95057542	95082563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr17_+_95057661_95063861_95063952_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
tx.5768	chr17	-	652	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	1	14471	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAACTTGTGAATGTAA	NA	False	NA	NA	False	NA	NA	NA	95142225	95126014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
tx.5769	chr17	+	3094	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-17	2	-17	-2	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTCGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	95172328	95185747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
tx.577	chr1	-	1218	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	11032	169	at_least_one_novel_splicesite	FALSE	canonical	2	45	junction_6	361.009541271265	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATACTGTAAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	167101138	167053626	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167100931
tx.5770	chr18	+	1804	2	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATACATTGTGGAAAATA	NA	False	NA	NA	False	NA	NA	NA	3000023	3002586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr18_+_3000266_3001024
tx.5771	chr18	-	2528	6	NIC	ENSMUSG00000063889.17	novel	1996	8	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	27.7459907013608	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGCCTGTGTGTATGTC	9	True	NA	NA	False	NA	NA	NA	3337621	3266356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_3268130_3273421_3273579_3295039_3295183_3295321_3295417_3325360_3325479_3337379
tx.5772	chr18	-	1577	7	NIC	ENSMUSG00000063889.17	novel	2778	9	NA	NA	-17	61	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	26.6671874949138	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTTCCCAGTCTCTC	83	False	NA	NA	False	NA	NA	NA	3337606	3267328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_3268130_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3325360_3325479_3337379
tx.5773	chr18	-	1558	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	-47	-255	-32	-43	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCAAAGCCTCAGGACTT	9	True	NA	NA	False	NA	NA	NA	3337621	3294226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
tx.5774	chr18	-	1146	4	FSM	ENSMUSG00000063889.17	ENSMUST00000149803.8	1422	4	-15	291	-15	7	multi-exon	FALSE	canonical	3	52	junction_2	16.5797734872612	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGTA	85	False	NA	NA	False	NA	NA	NA	3337604	3294474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_3295183_3295321_3295417_3325360_3325479_3337379
tx.5775	chr18	+	2850	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	24	19	combination_of_known_junctions	FALSE	canonical	3	200	junction_1	171.970666103263	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	-11	True	NA	NA	False	NA	NA	NA	3383011	3435404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
tx.5776	chr18	+	2834	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	21	973	-4	19	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	9	True	NA	NA	False	NA	NA	NA	3383252	3435404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
tx.5777	chr18	+	1364	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	63	3647	63	-3647	multi-exon	FALSE	canonical	3	117	junction_2	19.5	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGGTGTCTTTCATGA	-1	True	NA	NA	False	NA	NA	NA	3507985	3512757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_3508286_3511256_3511545_3511981
tx.5778	chr18	+	2109	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	-3	545	-3	0	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-15	True	NA	NA	False	NA	NA	NA	4375588	4396785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
tx.5779	chr18	+	2628	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	0	-2	0	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAACAGTATTTCTA	-8	True	NA	NA	False	NA	NA	NA	4375595	4397330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
tx.578	chr1	-	1282	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	260	3189	-176	155	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTGTAACTGTACAGA	NA	False	NA	NA	False	NA	NA	NA	167112629	167053640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
tx.5780	chr18	+	654	5	ISM	ENSMUSG00000024236.19	ENSMUST00000138258.8	1430	8	-169	11661	-4	-232	5prime_fragment	FALSE	canonical	3	34	junction_1	22.0383189014044	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAAGTATTTTGTGGTGC	-12	True	NA	NA	False	NA	NA	NA	4920535	5046645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588
tx.5781	chr18	-	3058	9	ISM	ENSMUSG00000041225.17	ENSMUST00000182066.8	4506	16	72969	21	-4687	-21	3prime_fragment	FALSE	canonical	3	136	junction_6	14.2565774293833	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	13	False	NA	NA	False	NA	NA	NA	6039394	6024447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353
tx.5782	chr18	-	1554	2	ISM	ENSMUSG00000006740.15	ENSMUST00000168031.2	1959	9	6298	-879	6298	879	3prime_fragment	TRUE	canonical	3	921	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGGAAGGGTCTCAGCA	8673	False	NA	NA	False	NA	NA	NA	6208242	6202209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_6203708_6208186
tx.5783	chr18	-	4858	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	-37	1211	-37	876	multi-exon	TRUE	canonical	0	0	junction_8	215.348105169282	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACAGGAAGGGTCTCA	NA	False	NA	NA	False	NA	NA	NA	6241560	6202212	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
tx.5784	chr18	-	2290	16	ISM	ENSMUSG00000006740.15	ENSMUST00000163210.2	2006	17	-63	-7	-10	7	intron_retention	FALSE	canonical	3	809	junction_12	103.126373391528	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAAATGAGAAAGAG	-15	True	NA	NA	False	NA	NA	NA	6241533	6214561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
tx.5785	chr18	-	1453	11	ISM	ENSMUSG00000006740.15	ENSMUST00000163210.2	2006	17	-47	8218	6	-1927	intron_retention	FALSE	canonical	3	809	junction_7	115.848867063947	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAATAAAACTCTAC	1	True	NA	NA	False	NA	NA	NA	6241517	6222786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
tx.5786	chr18	-	3315	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	-29	679	-29	-679	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCAGTTTTTTAAAACG	2	True	NA	NA	False	NA	NA	NA	6490885	6436631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
tx.5787	chr18	-	833	2	FSM	ENSMUSG00000024240.14	ENSMUST00000050542.6	565	2	-1	-267	-1	267	multi-exon	FALSE	canonical	3	18	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTTGTTTT	-19	True	NA	NA	False	NA	NA	NA	6490857	6488892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_6489331_6490462
tx.5788	chr18	+	2225	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	44	4246	-14	943	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	657	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTGTCTTGTCTGTC	-7	True	NA	NA	False	NA	NA	NA	6765188	6790183	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
tx.5789	chr18	-	4844	17	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-11	-147	combination_of_known_junctions	FALSE	canonical	3	86	junction_16	10.4634781502137	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-33	True	NA	NA	False	NA	NA	NA	7626877	7348110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
tx.579	chr1	+	1219	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	355	-1	-3	1	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	167136301	167158355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
tx.5790	chr18	+	3587	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-62	-455	-44	3	multi-exon	TRUE	canonical	3	146	junction_1	117.532571338518	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	304	False	NA	NA	False	NA	NA	NA	7868787	7927522	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
tx.5791	chr18	+	3326	10	FSM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	22	4676	16	-31	multi-exon	FALSE	canonical	3	13	junction_7	3.52066211505664	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGATTTAATCTGTCCA	-9	True	NA	NA	False	NA	NA	NA	9707616	9877968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
tx.5792	chr18	+	2105	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	267	1762	-4	2	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACAGTTGGCTGGTG	6	True	NA	NA	False	NA	NA	NA	9958172	9993727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
tx.5793	chr18	+	2300	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_16	182.47716815401	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	6	True	NA	NA	False	NA	NA	NA	9958172	9993725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
tx.5794	chr18	+	1983	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	237.141378171329	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACAGTTGGCTGGTG	9	True	NA	NA	False	NA	NA	NA	9958175	9993727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
tx.5795	chr18	-	2332	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	23	2371	23	157	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	187	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAACTTTTGACATTTC	-37	True	NA	NA	False	NA	NA	NA	10030118	9995436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
tx.5796	chr18	-	1508	2	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTATAATTGTTACTAT	NA	False	NA	NA	False	NA	NA	NA	10276059	10273537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr18_-_10274701_10275714
tx.5797	chr18	-	1459	3	ISM	ENSMUSG00000024293.17	ENSMUST00000145320.2	2249	11	22	27952	-12	1324	5prime_fragment	FALSE	canonical	3	135	junction_1	2	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAGAAATAAAACCT	-5	True	NA	NA	False	NA	NA	NA	10610087	10594581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_10595876_10596338_10596442_10610025
tx.5798	chr18	+	618	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	28	212	7	63	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	1090	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCACATAGTGTGTTC	-4	True	NA	NA	False	NA	NA	NA	10617802	10628018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
tx.5799	chr18	-	1927	9	FSM	ENSMUSG00000002475.17	ENSMUST00000117828.9	1962	9	35	0	-23	0	multi-exon	FALSE	canonical	2	2	junction_1	3.63145976158349	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTTTGTGAGTTTT	-2	True	NA	NA	False	NA	NA	NA	10706736	10644410	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_10645236_10647725_10647892_10647969_10648019_10652187_10652362_10658779_10658893_10682068_10682115_10704547_10704731_10706000_10706165_10706529
tx.58	chr1	-	1381	10	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-14686	2	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_9	88.3062851670253	62	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCAAGTGGGAGTCTT	2980	False	NA	NA	False	NA	NA	NA	33677091	33492888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33677047
tx.580	chr1	+	2396	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	194	245	-51	-245	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	145	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTTTCTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	167177753	167195856	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
tx.5800	chr18	+	3371	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-40	-122	6	122	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTGTTGTAGTCTATAAT	3251	False	NA	NA	False	NA	NA	NA	11790445	11876057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
tx.5801	chr18	-	2569	15	FSM	ENSMUSG00000049411.16	ENSMUST00000209859.2	1426	15	-5	-1138	2	0	multi-exon	TRUE	canonical	3	13	junction_4	4.03871569806491	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATGTTTATAAGC	NA	False	NA	NA	False	NA	NA	NA	12254592	12114994	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
tx.5802	chr18	-	1242	14	NNC	ENSMUSG00000049411.16	novel	1641	10	NA	NA	3	-36119	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	6.20173672946042	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGCTTCTCACTGGG	NA	False	NA	NA	False	NA	NA	NA	12254568	12152251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_12152670_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
tx.5803	chr18	+	1915	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	14	1861	0	21	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	95	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATAGATGTGTAGCCACA	5519	False	NA	NA	False	NA	NA	NA	12261811	12288583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
tx.5804	chr18	+	2118	6	ISM	ENSMUSG00000024404.8	ENSMUST00000235084.2	1365	8	9642	-1193	-27	-3	3prime_fragment	FALSE	canonical	3	378	junction_1	22.2261107708929	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGGTTCATTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	12281845	12289755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
tx.5805	chr18	+	2133	20	FSM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	14	23	-8	0	multi-exon	FALSE	canonical	3	252	junction_9	24.4724957266604	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATAAAGTACCTACAAC	NA	False	NA	NA	False	NA	NA	NA	12301787	12323031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
tx.5806	chr18	+	1284	9	FSM	ENSMUSG00000024410.16	ENSMUST00000126523.9	1282	9	0	-2	0	2	multi-exon	FALSE	canonical	3	285	junction_6	11.1740491765519	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGATTTGATGTTTGG	NA	False	NA	NA	False	NA	NA	NA	12301773	12314179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722
tx.5807	chr18	+	2046	20	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	69.772721653814	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATGTTGCTAACTCCC	NA	False	NA	NA	False	NA	NA	NA	12301773	12323054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322340_12322443_12322862
tx.5808	chr18	-	2286	12	FSM	ENSMUSG00000044252.19	ENSMUST00000119043.8	2522	12	246	-10	-63	0	multi-exon	FALSE	canonical	3	318	junction_8	32.6774873853266	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	3046	False	NA	NA	False	NA	NA	NA	12952718	12888384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561
tx.5809	chr18	-	2595	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	421	14	-12	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	NA	False	NA	NA	NA	12995309	12888384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
tx.581	chr1	-	667	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	15	415	15	-415	multi-exon	FALSE	canonical	3	373	junction_1	22.7912263820971	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGCCTGCATCTCTTT	4971	False	NA	NA	False	NA	NA	NA	167221395	167199949	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
tx.5810	chr18	-	2761	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	57	0	-3	0	multi-exon	TRUE	canonical	3	45	junction_13	91.3749671156418	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	NA	False	NA	NA	NA	12996440	12888384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
tx.5811	chr18	-	2321	13	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-3	0	intron_retention	FALSE	canonical	2	8	junction_12	103.510969628022	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	NA	False	NA	NA	NA	12996440	12888384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996405
tx.5812	chr18	-	2501	14	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-20	0	intron_retention	FALSE	canonical	3	33	junction_13	94.3034884243106	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	NA	False	NA	NA	NA	12996457	12888384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
tx.5813	chr18	+	3452	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	311	0	-38	0	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	NA	False	NA	NA	NA	13105290	13126007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
tx.5814	chr18	-	2033	4	ISM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	42417	-26	-2943	0	3prime_fragment	FALSE	canonical	3	595	junction_3	167.978834645585	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	14773406	14758685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313
tx.5815	chr18	-	2945	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	147	6	-1	0	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	14815824	14758685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
tx.5816	chr18	-	2860	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	53	-2	3	0	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	14815832	14758685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
tx.5817	chr18	+	1678	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	17	-3	17	0	multi-exon	TRUE	canonical	3	86	junction_2	7.18795288428261	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTCTCCTTCAAAGG	NA	False	NA	NA	False	NA	NA	NA	14839224	14895358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
tx.5818	chr18	+	988	4	Antisense	novelGene_ENSMUSG00002076630.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.93025150224688	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTTTGTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	20895474	20997370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr18_+_20895821_20951304_20951388_20963808_20964032_20997034
tx.5819	chr18	-	1724	2	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATCAGTGTTCATATG	NA	False	NA	NA	False	NA	NA	NA	21076875	21065309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr18_-_21066903_21076744
tx.582	chr1	-	2020	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	9	376	9	1	multi-exon	TRUE	canonical	3	65	junction_13	32.5556419455247	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTATCCAGGATGTTG	NA	False	NA	NA	False	NA	NA	NA	169359024	169325878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
tx.5820	chr18	+	1544	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	-34	-162	-34	162	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTGATAGAAGAT	5307	False	NA	NA	False	NA	NA	NA	21077647	21117081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
tx.5821	chr18	+	1609	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	97	-300	97	162	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTGATAGAAGAT	1316	False	NA	NA	False	NA	NA	NA	21094625	21117081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
tx.5822	chr18	+	2485	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	-68	5	-68	3	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTTTTGTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	21134329	21160587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
tx.5823	chr18	+	2375	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	-66	693	-66	3	multi-exon	FALSE	canonical	3	116	junction_1	148.868416917611	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTTTTGTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	21134331	21160587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
tx.5824	chr18	+	2137	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-62	694	21	3	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTTTTGTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	21134985	21160587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
tx.5825	chr18	+	2248	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	24	-1	24	1	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGTAAAAAACCTTTTT	NA	False	NA	NA	False	NA	NA	NA	21134988	21160593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
tx.5826	chr18	+	2075	5	FSM	ENSMUSG00000024317.16	ENSMUST00000234545.2	1769	5	-161	-145	26	3	multi-exon	FALSE	canonical	3	50	junction_3	174.891930917353	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTTTTGTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	21134990	21160587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21159142
tx.5827	chr18	+	450	3	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-306	-16612	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_2	15	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	21194673	21200630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_21194811_21194905_21195074_21200485
tx.5828	chr18	+	2538	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	0	1488	0	5	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAAATTTCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	23937040	24025426	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
tx.5829	chr18	+	5663	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-23	-7	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24.0554914035583	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACATTTTGTGTGGATC	NA	False	NA	NA	False	NA	NA	NA	24087725	24097723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_24088081_24089395_24089911_24090111_24090254_24093072
tx.583	chr1	-	2086	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	-18	0	-18	0	multi-exon	FALSE	canonical	3	87	junction_14	29.0531708199618	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	NA	False	NA	NA	NA	169359015	169325879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
tx.5830	chr18	+	2366	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	28	646	28	-646	multi-exon	FALSE	canonical	3	128	junction_1	18.5	66	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTCTTGCATCGTT	1087	False	NA	NA	False	NA	NA	NA	24122716	24137787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_24122789_24123234_24123448_24135706
tx.5831	chr18	-	3575	4	NIC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	-19	1657	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	NA	NA	NA	24153396	24145324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
tx.5832	chr18	-	3197	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-27	-1657	23	1657	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	NA	NA	NA	24153404	24145324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
tx.5833	chr18	-	3140	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	26	2566	26	1657	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	NA	NA	NA	24153841	24145324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
tx.5835	chr18	-	2402	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	91	5	-27	-5	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	166	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGTTGGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	24254919	24237818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
tx.5836	chr18	+	3814	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	-40	203	-40	-195	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAGATTTTTGTACC	NA	False	NA	NA	False	NA	NA	NA	24338360	24419672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
tx.5837	chr18	+	2349	7	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	34938	589	-12460	-589	3prime_fragment	FALSE	canonical	3	536	junction_5	45.6024487646588	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAAATCTCATTGTGAC	3169	False	NA	NA	False	NA	NA	NA	24400591	24419278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
tx.5838	chr18	+	1052	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-18	31	0	-31	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTTTTTATGATAAAGG	341	False	NA	NA	False	NA	NA	NA	24603907	24610824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
tx.5839	chr18	-	4030	8	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	90.8764579648926	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTGTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	24663281	24618014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_24620902_24621192_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
tx.584	chr1	-	1319	11	FSM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	-45	-3	8	3	multi-exon	FALSE	canonical	3	87	junction_10	33.1324614238061	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTGTGGGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	169359025	169337682	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
tx.5840	chr18	-	1653	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-12	2658	-12	332	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTAGTACTATAGTAGTTC	NA	False	NA	NA	False	NA	NA	NA	24663273	24620674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
tx.5841	chr18	-	2342	6	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-9	20468	-9	-1	5prime_fragment	FALSE	canonical	3	215	junction_1	43.046951111548	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTCTCATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	24663270	24638484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
tx.5842	chr18	+	2771	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	0	695	0	2	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	283	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	NA	False	NA	NA	NA	24737017	24771869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
tx.5843	chr18	+	2762	15	FSM	ENSMUSG00000039616.11	ENSMUST00000068006.9	2903	15	143	-2	-44	2	multi-exon	FALSE	canonical	2	8	junction_8	5.18878303533257	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCATTATTGAGAC	NA	False	NA	NA	False	NA	NA	NA	24786890	24834634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_24787125_24793046_24793137_24797073_24797141_24799066_24799709_24803621_24803699_24807287_24807488_24809616_24809734_24812442_24812869_24816185_24816349_24819683_24819763_24821994_24822120_24825574_24825681_24828930_24829070_24832909_24833015_24834442
tx.5844	chr18	-	1244	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	341	2574	28	-2574	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCAGTATCGACTAGTTA	NA	False	NA	NA	False	NA	NA	NA	25301723	25271667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
tx.5845	chr18	+	853	6	FSM	ENSMUSG00000033632.17	ENSMUST00000162149.2	1427	6	-14	588	-4	-588	multi-exon	FALSE	canonical	3	29	junction_5	7.56306816047562	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGGTGTTTGGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	25302062	25423377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995
tx.5846	chr18	+	1397	5	NNC	ENSMUSG00000033632.17	novel	5257	10	NA	NA	0	5853	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	18.1435250158287	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATATTTTTTTAACTTT	NA	False	NA	NA	False	NA	NA	NA	25302066	25328143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25327097
tx.5847	chr18	-	3205	10	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248904	-1456	-3840	10	3prime_fragment	FALSE	canonical	2	4	junction_2	10.3064165558269	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAACCTCAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	25638136	25610678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
tx.5848	chr18	-	1272	2	ISM	ENSMUSG00000024268.17	ENSMUST00000025117.14	2899	13	266723	206	-130	-206	3prime_fragment	FALSE	canonical	3	39	junction_1	0	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAACCTTATAGA	NA	False	NA	NA	False	NA	NA	NA	25620084	25611730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_25612769_25619850
tx.5849	chr18	-	2243	11	NNC	ENSMUSG00000024268.17	novel	2492	13	NA	NA	-3855	-210	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	11.6858889263932	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAAAACCTTA	NA	False	NA	NA	False	NA	NA	NA	25638151	25611734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_25612769_25619850_25620023_25620296_25620376_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
tx.5850	chr18	-	1200	8	NNC	ENSMUSG00000024268.17	novel	518	6	NA	NA	-3831	-7611	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.96319758523583	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTGGGTCTGACTCT	NA	False	NA	NA	False	NA	NA	NA	25638127	25627935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_25628286_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
tx.5851	chr18	-	1061	6	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248893	18115	-3851	7027	internal_fragment	FALSE	canonical	3	20	junction_1	5.17687164221791	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCATCCCACTGATTG	NA	False	NA	NA	False	NA	NA	NA	25638147	25630249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
tx.5852	chr18	+	3128	25	FSM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	123	6	0	0	multi-exon	FALSE	canonical	3	114	junction_11	21.8495089571063	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATGCCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	30405922	30481173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
tx.5853	chr18	+	690	4	ISM	ENSMUSG00000033628.16	ENSMUST00000131405.2	3144	25	60328	0	60328	0	3prime_fragment	FALSE	canonical	3	138	junction_2	34.4512538072113	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATGCCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	30466307	30481173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_30466383_30469146_30469238_30477003_30477130_30480775
tx.5854	chr18	-	3384	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-7	994	2	-994	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCTTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	31742962	31714214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
tx.5855	chr18	+	1351	5	ISM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	76957	-10	76161	10	3prime_fragment	FALSE	canonical	3	176	junction_3	5.22015325445528	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCCTCTTTCTAACCAG	NA	False	NA	NA	False	NA	NA	NA	31844392	31856124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
tx.5856	chr18	+	3426	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	-41	0	13	0	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCTAAACTTCACCCCT	6880	False	NA	NA	False	NA	NA	NA	31892891	31915796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
tx.5857	chr18	+	938	3	FSM	ENSMUSG00000024258.5	ENSMUST00000234146.2	706	3	-20	-212	-19	0	multi-exon	FALSE	canonical	3	63	junction_2	315.5	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	31922192	31929754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_31922298_31924892_31925074_31929102
tx.5858	chr18	+	1048	4	FSM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	-32	-1	-32	1	multi-exon	FALSE	canonical	3	694	junction_1	16.2138486760204	480	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTGTATTTATTTG	NA	False	NA	NA	False	NA	NA	NA	31922179	31929755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_31922298_31924892_31925074_31928340_31928437_31929102
tx.5859	chr18	+	1174	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-84	1326	-1	-1326	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATCTAAAGCCTGCAGA	5649	False	NA	NA	False	NA	NA	NA	31937144	31967149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
tx.586	chr1	-	1429	8	FSM	ENSMUSG00000026675.13	ENSMUST00000111353.4	1446	8	20	-3	20	3	multi-exon	TRUE	canonical	3	56	junction_5	6.15115718331742	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTCTGTGATCTTAAC	NA	False	NA	NA	False	NA	NA	NA	169796790	169783066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
tx.5860	chr18	+	2802	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	0	6811	0	-2	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGGTTGTCTCATCATT	NA	False	NA	NA	False	NA	NA	NA	32200793	32230570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
tx.5861	chr18	+	2676	15	FSM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	30	2	-24	-2	multi-exon	FALSE	canonical	3	78	junction_6	14.4393524078881	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTGTCTCTATTTTAT	NA	False	NA	-86	True	NA	NA	NA	32373382	32403202	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
tx.5862	chr18	+	818	3	ISM	ENSMUSG00000024381.17	ENSMUST00000234373.2	2682	6	3947	-4	3947	0	3prime_fragment	FALSE	canonical	3	29	junction_1	1.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGAGGCGTGTCTTTCTT	6560	False	NA	NA	False	NA	NA	NA	32565033	32568790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_32565147_32565376_32565479_32568187
tx.5863	chr18	+	2864	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	30	1561	2	-367	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	8994	False	NA	NA	False	NA	NA	NA	32970307	32999086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
tx.5864	chr18	+	1522	12	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	13096	367	-2700	-367	internal_fragment	FALSE	canonical	3	650	junction_4	69.3480859490252	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	3223	False	NA	NA	False	NA	NA	NA	32983459	32999086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
tx.5865	chr18	+	1631	11	FSM	ENSMUSG00000038128.8	ENSMUST00000042868.6	2717	11	159	927	159	-927	multi-exon	FALSE	canonical	0	0	junction_5	3.0347981810987	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGCATGTGTTTGCT	4942	False	NA	NA	False	NA	NA	NA	33072369	33318396	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_33072598_33211045_33211125_33240932_33240996_33242817_33242901_33262813_33262887_33289801_33289893_33291879_33291955_33309211_33309288_33312550_33312678_33315290_33315444_33317813
tx.5866	chr18	-	1447	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	15	3635	15	415	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATTTATTCTGGGAGT	NA	False	NA	NA	False	NA	NA	NA	33346900	33336042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
tx.5867	chr18	-	1403	6	FSM	ENSMUSG00000024378.10	ENSMUST00000119991.8	941	6	-54	-408	1	408	multi-exon	FALSE	canonical	1	1	junction_2	21.0959711793508	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTATGTGCATTTATTC	NA	False	NA	NA	False	NA	NA	NA	33346873	33336049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_33336869_33338273_33338379_33339172_33339300_33341229_33341280_33342095_33342211_33346686
tx.5868	chr18	-	2023	4	FSM	ENSMUSG00000042834.16	ENSMUST00000051087.16	659	4	305	-1669	1	0	multi-exon	FALSE	canonical	3	37	junction_1	5.90668171555645	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTGGCTCATTATT	NA	False	NA	NA	False	NA	NA	NA	33596487	33570071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430
tx.5869	chr18	-	2036	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	149	0	-26	0	multi-exon	FALSE	canonical	3	35	junction_4	6.79613860953409	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTGGCTCATTATT	NA	False	NA	NA	False	NA	NA	NA	33596933	33570071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
tx.587	chr1	-	3393	8	ISM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	52255	2729	-21145	-2729	3prime_fragment	FALSE	canonical	3	53	junction_3	13.844618788098	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCTCAGTGGTTAAC	1300	False	NA	NA	False	NA	NA	NA	170643085	170534971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991
tx.5870	chr18	+	434	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	-1	-3	-1	3	multi-exon	FALSE	canonical	3	377	junction_1	24	873	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTATGTTGTGTGATT	NA	False	NA	NA	False	NA	NA	NA	33927943	33929042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_33928178_33928435_33928499_33928905
tx.5871	chr18	-	2082	12	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-63	-4	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	59.7486470679151	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTGGTCTGGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	33965910	33929383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33965813
tx.5872	chr18	-	1813	9	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	178703	0	4578	0	3prime_fragment	FALSE	canonical	3	167	junction_1	19.3649167310371	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGGTCTCTTTACTG	NA	False	NA	NA	False	NA	NA	NA	33961269	33929379	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156
tx.5875	chr18	+	871	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	2	3	2	-3	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	608	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTAGTAGCTTTCACT	NA	False	NA	NA	False	NA	NA	NA	34464199	34469649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
tx.5876	chr18	-	768	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-23	2107	-23	0	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	342	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGCCTTTGTTGTC	5538	False	NA	NA	False	NA	NA	NA	34506445	34480044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
tx.5877	chr18	-	2517	4	ISM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	61236	-1780	5850	1780	3prime_fragment	FALSE	canonical	3	36	junction_3	6.64997911442	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	461	False	NA	NA	False	NA	NA	NA	34578640	34573623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584
tx.5878	chr18	-	3230	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	27	1211	-20	4	multi-exon	FALSE	canonical	3	307	junction_21	99.9950565671548	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	34757627	34732878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
tx.5879	chr18	+	2972	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	230	472	-42	0	multi-exon	TRUE	canonical	3	938	junction_13	99.0044268869321	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6207	False	NA	NA	False	NA	NA	NA	34758017	34765858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
tx.5880	chr18	-	2083	17	FSM	ENSMUSG00000024370.18	ENSMUST00000025228.12	2084	17	4	-3	4	3	multi-exon	FALSE	canonical	3	73	junction_1	259.182247655969	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTGTTCTTTCTAGAG	NA	False	NA	NA	False	NA	NA	NA	34784784	34764000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
tx.5881	chr18	+	933	4	ISM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	6111	0	2221	0	3prime_fragment	FALSE	canonical	3	1104	junction_2	71.5557280881288	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	1558	False	NA	NA	False	NA	NA	NA	34764196	34765858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_34764395_34764573_34764666_34764978_34765117_34765353
tx.5882	chr18	+	1037	3	NIC	ENSMUSG00000003779.17	novel	3107	19	NA	NA	2296	0	combination_of_known_junctions	FALSE	canonical	3	1104	junction_1	87.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	1633	False	NA	NA	False	NA	NA	NA	34764271	34765858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_34764666_34764978_34765117_34765353
tx.5883	chr18	-	3033	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	0	1100	0	895	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATATAATATTTGTGCA	NA	False	NA	NA	False	NA	NA	NA	34784788	34765835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
tx.5884	chr18	-	1960	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	-15	0	-15	0	multi-exon	FALSE	canonical	3	155	junction_14	20.2922524674833	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2777	False	NA	NA	False	NA	NA	NA	34884601	34866045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
tx.5885	chr18	-	2201	10	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	327	1342	327	-1342	3prime_fragment	FALSE	canonical	3	1038	junction_9	65.5033690585812	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGATGATTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	35064733	35037179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621
tx.5886	chr18	-	2350	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	17	1342	17	-1342	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	606	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGATGATTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	35065043	35037179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
tx.5887	chr18	-	2825	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	5	219	5	-219	multi-exon	TRUE	canonical	3	5978	junction_5	267.479905787332	1107	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	204	False	NA	NA	False	NA	NA	NA	35087405	35070685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
tx.589	chr1	-	1279	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	95	0	12	0	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	NA	False	NA	NA	NA	170713014	170701756	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
tx.5893	chr18	+	723	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	37	430	0	4	multi-exon	FALSE	canonical	3	167	junction_1	16.2685791225499	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATTTCATTGGCAT	NA	False	NA	NA	False	NA	NA	NA	35686460	35690939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
tx.5896	chr18	+	1458	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	17	0	-7	0	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	356	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	4657	False	NA	NA	False	NA	NA	NA	35731686	35750239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
tx.5897	chr18	+	1213	3	ISM	ENSMUSG00000037058.17	ENSMUST00000235476.2	1569	7	11406	1	5	0	3prime_fragment	FALSE	canonical	3	2803	junction_1	137	296	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	3350	False	NA	-14	True	NA	NA	NA	35744042	35750239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_35744088_35746375_35746556_35749251
tx.5898	chr18	-	676	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	26	0	-4	0	multi-exon	TRUE	canonical	3	154	junction_2	20.7980768341691	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAATGCCCAACCTCTC	NA	False	NA	NA	False	NA	NA	NA	35795213	35789741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
tx.5899	chr18	-	681	4	FSM	ENSMUSG00000024352.13	ENSMUST00000096573.4	710	4	29	0	-1	0	multi-exon	FALSE	canonical	3	181	junction_2	13.2748718344933	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTATCCCATTT	NA	False	NA	NA	False	NA	NA	NA	35795210	35793068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_35793407_35793496_35793628_35793844_35793911_35795064
tx.59	chr1	+	2517	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	13	1792	-1	0	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTCTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	33758988	33779853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
tx.590	chr1	-	1322	3	FSM	ENSMUSG00000059498.14	ENSMUST00000168817.2	1298	3	-25	1	-25	0	multi-exon	FALSE	canonical	3	151	junction_2	7.5	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATCTCCTTTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	170885648	170878743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_170879422_170881507_170881763_170885259
tx.5900	chr18	-	1225	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	-5	3926	-5	2	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTACTCTCTGCTGAC	NA	False	NA	NA	False	NA	NA	NA	35836179	35808081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
tx.5901	chr18	-	1328	9	NIC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	-14	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	22.8250821466211	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTACTCTCTGCTGAC	NA	False	NA	NA	False	NA	NA	NA	35836188	35808081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835559_35836078
tx.5902	chr18	-	1042	9	FSM	ENSMUSG00000073599.11	ENSMUST00000133064.8	1055	9	13	0	13	0	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTTCTTTTAAGGTCT	NA	False	NA	NA	False	NA	NA	NA	35855396	35846138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_35846488_35846693_35846791_35848231_35848269_35848475_35848575_35849005_35849129_35849805_35849866_35850205_35850344_35851400_35851440_35855296
tx.5903	chr18	+	1729	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	20	731	-9	617	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGAATAGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	35904630	35939490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
tx.5904	chr18	+	2170	3	NIC	ENSMUSG00000046668.10	novel	1169	2	NA	NA	-138	3	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCTTCTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	35963228	35994744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_35963293_35991445_35992510_35993702
tx.5905	chr18	+	2277	3	NIC	ENSMUSG00000046668.10	novel	857	2	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	135.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	NA	False	NA	NA	NA	35963278	35994741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_35963453_35991445_35992510_35993702
tx.5906	chr18	+	1694	2	ISM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	29017	-3	4067	3	3prime_fragment	FALSE	canonical	3	329	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCTTCTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	35991857	35994744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_35992510_35993702
tx.5907	chr18	+	836	3	FSM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	-6	1	-6	-1	multi-exon	FALSE	canonical	3	759	junction_1	90	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTTACTCCAGG	NA	False	NA	NA	False	NA	NA	NA	36481743	36536032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36481870_36499567_36499795_36535549
tx.5908	chr18	+	941	4	FSM	ENSMUSG00000046727.14	ENSMUST00000235864.2	1101	4	42	118	4	-1	multi-exon	FALSE	canonical	3	70	junction_2	406.851597295896	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTTACTCCAGG	NA	False	NA	NA	False	NA	NA	NA	36481753	36536032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36481870_36483746_36483862_36499567_36499795_36535549
tx.5909	chr18	-	702	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	0	407	0	122	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	493	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	NA	False	NA	NA	NA	36587577	36537135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
tx.591	chr1	-	1172	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	0	1999	0	243	multi-exon	TRUE	canonical	3	578	junction_5	147.434866975217	250	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	NA	False	NA	NA	NA	170978172	170956732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
tx.5910	chr18	-	1722	4	NNC	ENSMUSG00000024486.7	novel	2375	6	NA	NA	7238	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	26.0810701893581	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTTCTGTTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	36641182	36637984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_36639418_36639687_36639779_36640501_36640658_36641140
tx.5911	chr18	-	2378	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	-8	5	-8	-5	multi-exon	FALSE	canonical	3	29	junction_4	10.9068785635488	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTTCTGTTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	36648866	36637984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
tx.5912	chr18	-	937	2	Antisense	novelGene_ENSMUSG00000024483.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGCTCCTCACTAATTC	7293	False	NA	NA	False	NA	NA	NA	36693265	36692204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr18_-_36692806_36692929
tx.5913	chr18	-	895	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	522	562	-3	3	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	558	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATGTCAGACTGGTT	NA	False	NA	NA	False	NA	NA	NA	36803346	36800295	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
tx.5914	chr18	+	2473	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	-9	-2	0	-1	multi-exon	FALSE	canonical	3	269	junction_1	96	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	36812635	36816913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36812677_36813568_36813668_36814580
tx.5915	chr18	+	2361	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	8	-7	4	-1	multi-exon	TRUE	canonical	3	118	junction_3	140.362229804017	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	36812639	36816913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
tx.5916	chr18	+	1850	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	-27	0	2	0	multi-exon	FALSE	canonical	3	53	junction_4	9.25845604107201	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGCCTCAGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	36868093	36875450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
tx.5919	chr18	-	436	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	11	125	11	-125	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	1379	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAATGTCCTCTTCATT	NA	False	NA	NA	False	NA	NA	NA	36877599	36875509	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_36875712_36877233_36877341_36877472
tx.592	chr1	-	1560	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	54	3098	0	-746	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGTTTCTCCATTCC	9563	False	NA	NA	False	NA	NA	NA	171050029	171046677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
tx.5920	chr18	+	1956	20	FSM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	36	4	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	168.043095646503	628	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	NA	False	NA	NA	NA	36877744	36890688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
tx.5921	chr18	+	1601	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	15	3	15	-3	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	313	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTCTGGTGCCAAGCTG	NA	False	NA	NA	False	NA	NA	NA	36893287	36896860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
tx.5922	chr18	+	1032	4	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	2183	89	-255	-89	3prime_fragment	FALSE	canonical	3	263	junction_2	39.6316371938716	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTAAGCCCAAACCAGG	NA	False	NA	NA	False	NA	NA	NA	36895455	36896774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_36895588_36895710_36895811_36895901_36896072_36896144
tx.5923	chr18	-	1491	4	FSM	ENSMUSG00000044595.11	ENSMUST00000061522.8	1451	4	-36	-4	-20	2	multi-exon	TRUE	canonical	3	43	junction_2	7.76029781788188	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGCTTGGTATACAT	NA	False	NA	NA	False	NA	NA	NA	36899287	36896721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_36897541_36898148_36898611_36898945_36899064_36899195
tx.5924	chr18	-	1951	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	38	0	38	0	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	367	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGTCCTTGATGC	NA	False	NA	NA	False	NA	NA	NA	36916220	36899580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
tx.5925	chr18	+	2170	12	FSM	ENSMUSG00000019143.16	ENSMUST00000019287.9	2002	12	11	-179	11	179	multi-exon	FALSE	canonical	3	6	junction_9	36.3770429831556	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGAGTTCATTTCC	NA	False	NA	NA	False	NA	NA	NA	36916294	36924926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36923186_36923304_36923521_36923669_36924122
tx.5926	chr18	+	2410	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	237	689	14	179	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGAGTTCATTTCC	NA	False	NA	NA	False	NA	NA	NA	36916297	36924926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
tx.5927	chr18	+	1702	4	ISM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	6384	273	-621	-273	3prime_fragment	FALSE	canonical	3	88	junction_1	16.2138486760204	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACATAAAGTGTGGCTAG	2132	False	NA	NA	False	NA	NA	NA	36922444	36925342	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_36922663_36923186_36923304_36923521_36923669_36924122
tx.5928	chr18	+	1268	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	51	991	51	592	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	360	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTTTCTTCTGTTTCAC	6667	False	NA	NA	False	NA	NA	NA	36926979	36931728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
tx.5929	chr18	+	1197	5	ISM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	451	999	451	584	3prime_fragment	FALSE	canonical	3	554	junction_4	81.7201780467958	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAACCTCGTTTCTTC	7067	False	NA	NA	False	NA	NA	NA	36927379	36931720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
tx.593	chr1	-	1022	6	ISM	ENSMUSG00000005674.10	ENSMUST00000111327.8	2812	9	1321	1305	1321	-744	3prime_fragment	FALSE	canonical	3	111	junction_2	8.00999375780031	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTCTCCATTCCTC	9946	False	NA	NA	False	NA	NA	NA	171048432	171046675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373
tx.5930	chr18	-	1758	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	13	1531	13	-1531	multi-exon	FALSE	canonical	3	1260	junction_1	0	317	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	NA	False	NA	NA	NA	37777244	37775074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_37776586_37776997
tx.5931	chr18	+	2317	4	FSM	ENSMUSG00000102428.2	ENSMUST00000044851.8	5080	4	2763	0	2570	0	multi-exon	FALSE	canonical	3	109	junction_1	53.597263611743	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	37901395	37974926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_37901594_37958073_37958133_37966317_37966407_37972955
tx.5932	chr18	+	2144	3	FSM	ENSMUSG00000102543.6	ENSMUST00000192875.2	5777	3	5342	-1709	5342	0	multi-exon	FALSE	canonical	3	212	junction_1	9.5	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	2359	False	NA	NA	False	NA	NA	NA	37958048	37974926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_37958133_37966317_37966407_37972955
tx.5933	chr18	-	1988	2	ISM	ENSMUSG00000024456.17	ENSMUST00000115629.9	5416	26	54776	-4	1767	0	3prime_fragment	FALSE	canonical	3	103	junction_1	0	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTAGCCTCCTTTG	2479	False	NA	NA	False	NA	NA	NA	37984693	37976653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_37978552_37984603
tx.5934	chr18	-	1516	11	ISM	ENSMUSG00000024456.17	ENSMUST00000025337.14	5596	28	-32	52234	-2	320	5prime_fragment	FALSE	canonical	3	45	junction_4	3.38378486313773	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATATATATATATATG	NA	False	NA	NA	False	NA	NA	NA	38068466	38028889	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
tx.5935	chr18	-	1987	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	33	12	-9	-12	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCACTCAGTACTTTATT	NA	False	NA	NA	False	NA	NA	NA	38088036	38070036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
tx.5936	chr18	+	2395	13	FSM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	-4	3	0	-3	multi-exon	FALSE	canonical	3	315	junction_6	27.9179104200551	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCTTGCCCTTGAGT	3963	False	NA	NA	False	NA	NA	NA	38383307	38395679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
tx.5937	chr18	+	2536	6	NIC	ENSMUSG00000060450.15	novel	3040	9	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	90.4486594704421	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	943	False	NA	NA	False	NA	NA	NA	38429704	38450902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_38429852_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
tx.5938	chr18	+	2837	8	FSM	ENSMUSG00000060450.15	ENSMUST00000236649.2	2822	8	-13	-2	0	2	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	972	False	NA	NA	False	NA	NA	NA	38429733	38450897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
tx.5939	chr18	+	1667	4	FSM	ENSMUSG00000060450.15	ENSMUST00000237416.2	618	4	-19	-1030	0	2	multi-exon	FALSE	canonical	0	0	junction_3	98.2694707876708	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	972	False	NA	NA	False	NA	NA	NA	38429733	38450897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_38429852_38432806_38432980_38433481_38433538_38449577
tx.594	chr1	+	574	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3200	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	24.4176620957499	14	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGTGTCTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	171049422	171053947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_171049548_171052855_171052936_171053234_171053368_171053711
tx.5940	chr18	+	3026	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	17	-3	17	3	multi-exon	FALSE	canonical	3	120	junction_3	53.7248487666555	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTCCTGTTGATC	943	False	NA	NA	False	NA	NA	NA	38429704	38450905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
tx.5941	chr18	-	2276	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	30	-17	3	-6	multi-exon	FALSE	canonical	3	1055	junction_1	137.188434886716	463	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATTTTGGCATTCTCC	NA	False	NA	NA	False	NA	NA	NA	38472026	38460593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
tx.5942	chr18	+	1705	8	FSM	ENSMUSG00000024425.5	ENSMUST00000025293.5	1392	8	33	-346	18	-12	multi-exon	FALSE	canonical	3	22	junction_7	234.910230357323	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTACTGTAGATTAGTG	9162	False	NA	NA	False	NA	NA	NA	38552054	38598238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597313
tx.5943	chr18	+	1691	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	95	10	18	-10	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTAGATTAGTGTT	9162	False	NA	NA	False	NA	NA	NA	38552054	38598240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
tx.5944	chr18	+	870	5	NNC	ENSMUSG00000036452.19	novel	607	5	NA	NA	-5245	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11.5758369027902	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGACTTTGAGCGTTT	NA	False	NA	NA	False	NA	NA	NA	39419242	39440425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_39419308_39419579_39419740_39429837_39429977_39439754_39439906_39440070
tx.5945	chr18	-	1724	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	71	1533	-15	-1533	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTGAAGTTTACTT	NA	False	NA	NA	False	NA	NA	NA	40352411	40338481	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
tx.5946	chr18	-	343	2	FSM	ENSMUSG00000024487.6	ENSMUST00000237176.2	426	2	-15	98	-15	-98	multi-exon	FALSE	canonical	3	292	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATATATGAACTTATTCC	NA	False	NA	NA	False	NA	NA	NA	40352411	40351706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_40351919_40352280
tx.5947	chr18	-	843	7	FSM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	25	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	31.5722275988812	384	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTTCTCCAAATGT	NA	False	NA	NA	False	NA	NA	NA	42084282	42008664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
tx.5948	chr18	-	395	3	ISM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	38803	2	38755	-2	3prime_fragment	FALSE	canonical	3	300	junction_2	18	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATGCTTTCTCCAAAT	NA	False	NA	NA	False	NA	NA	NA	42045504	42008666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_42008919_42014277_42014351_42045434
tx.5949	chr18	-	3854	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	75	51	-1	-2	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	197	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	NA	False	NA	NA	NA	42395184	42335413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
tx.595	chr1	+	361	2	ISM	ENSMUSG00000005681.13	ENSMUST00000005824.12	492	4	592	0	583	0	3prime_fragment	FALSE	canonical	3	143	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGTGTCTTTGGGT	1986	False	NA	NA	False	NA	NA	NA	171053242	171053947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_171053368_171053711
tx.5950	chr18	+	460	3	ISM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-13	49342	6	-7143	5prime_fragment	FALSE	canonical	3	108	junction_1	4	60	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAATTAAAGAAGAGGT	NA	False	NA	NA	False	NA	NA	NA	42408423	42425154	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_42408658_42421172_42421292_42425047
tx.5951	chr18	+	684	3	ISM	ENSMUSG00000024491.17	ENSMUST00000237798.2	5565	16	34150	2690	34150	-2594	3prime_fragment	FALSE	canonical	3	127	junction_2	3.5	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAACTCTTAGCTATT	NA	False	NA	NA	False	NA	NA	NA	42466335	42471902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_42466463_42470027_42470139_42471456
tx.5952	chr18	+	2112	9	ISM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	41906	-1	25	1	3prime_fragment	FALSE	canonical	3	625	junction_6	61.7368407031004	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGTAAATGATTATT	NA	False	NA	NA	False	NA	NA	NA	42686471	42708620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
tx.5953	chr18	+	2034	8	ISM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	49470	-51	7589	51	3prime_fragment	FALSE	canonical	3	625	junction_5	65.9863931552002	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	-32	True	NA	NA	NA	42694035	42708670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
tx.5954	chr18	-	1904	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	202	0	202	0	multi-exon	FALSE	canonical	1	1	junction_3	2.11223541811477	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGCCAAAATGGTACAC	NA	False	NA	NA	False	NA	NA	NA	43526240	43457352	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
tx.5955	chr18	-	2083	2	Genic_Genomic	ENSMUSG00000043424.11	novel	2379	1	NA	NA	-34	0	multi-exon	FALSE	canonical	2	14	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGTACAGGCGTTCT	NA	False	NA	NA	False	NA	NA	NA	43610895	43608482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr18_-_43610174_43610503
tx.5956	chr18	+	233	2	FSM	ENSMUSG00000024472.10	ENSMUST00000202306.2	398	2	168	-3	143	3	multi-exon	FALSE	canonical	3	169	junction_1	0	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTTTTGTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	44513736	44529155	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_44513754_44528939
tx.5957	chr18	+	2105	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	143	6368	143	-6368	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACATGCTTTTCATTAAT	NA	False	NA	NA	False	NA	NA	NA	44513736	44551668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
tx.5958	chr18	-	2716	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	164	4597	1	657	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTCGTCTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	46413896	46373014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
tx.5959	chr18	-	1935	5	ISM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	20999	8	-79	-8	3prime_fragment	FALSE	canonical	3	48	junction_3	12.794041581924	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCCGTTGGTTGTAC	NA	False	NA	NA	False	NA	NA	NA	46423996	46415225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818
tx.596	chr1	-	1611	13	FSM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	7	5	7	-5	multi-exon	FALSE	canonical	3	1142	junction_12	107.460457843804	1085	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCTTGTAATGTGTCT	NA	False	NA	NA	False	NA	NA	NA	171074684	171062426	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
tx.5960	chr18	-	3630	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	21	2075	21	-2075	multi-exon	FALSE	canonical	3	135	junction_1	21.5	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTCCCCTTAATGAAA	NA	False	NA	NA	False	NA	NA	NA	46659017	46636887	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_46639457_46657168_46657897_46658684
tx.5961	chr18	-	2019	2	ISM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	1347	3148	1347	-3148	3prime_fragment	FALSE	canonical	3	135	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATTATTGAGAAATGTC	NA	False	NA	NA	False	NA	NA	NA	46657691	46637960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_46639457_46657168
tx.5962	chr18	+	1893	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	10	962	4	0	multi-exon	FALSE	canonical	3	1498	junction_1	106	1450	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGAGAGGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	46730780	46742316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_46730868_46731707_46731768_46740570
tx.5963	chr18	-	1543	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	40	12	0	-1	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	354	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACATTGCCTTTTTGAT	2617	False	NA	NA	False	NA	NA	NA	46861422	46846271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
tx.5964	chr18	-	2480	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	3	2282	3	-2282	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCAGAATAACTTATTG	NA	False	NA	NA	False	NA	NA	NA	46874643	46865492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
tx.5965	chr18	+	1273	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	40	207	3	-4	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTGTCAGTGTTGACTT	NA	False	NA	NA	False	NA	NA	NA	46874982	46923686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
tx.5966	chr18	+	798	2	ISM	ENSMUSG00000024480.10	ENSMUST00000234998.2	1407	4	23079	4	23079	-4	3prime_fragment	FALSE	canonical	3	568	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTGTCAGTGTTGACTT	6784	False	NA	NA	False	NA	NA	NA	46913760	46923686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_46913836_46922963
tx.5967	chr18	+	2251	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	0	6	0	4	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTTCAGGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	47054881	47067293	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
tx.5968	chr18	+	1568	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	42	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	651	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	47091924	47221062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
tx.5969	chr18	+	1409	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234280.2	600	6	-14	-795	0	0	multi-exon	FALSE	canonical	3	187	junction_3	477.712298355401	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	47091927	47221062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47123545_47123657_47219318_47219379_47220094
tx.597	chr1	+	933	3	ISM	ENSMUSG00000052423.16	ENSMUST00000129985.4	2805	6	3978	0	837	0	3prime_fragment	FALSE	canonical	3	223	junction_1	7.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	171101921	171104469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_171101959_171103454_171103560_171103678
tx.5970	chr18	+	1745	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	38	-781	-26	0	multi-exon	FALSE	canonical	3	36	junction_1	0	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGGATTTAGATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	50112531	50224849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_50112694_50223266
tx.5971	chr18	+	2650	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	29	5	29	-5	multi-exon	FALSE	canonical	3	285	junction_3	18.279183363144	160	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTTCCTGCTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	50261296	50329331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
tx.5972	chr18	+	1610	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	-13	1059	-13	-1059	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	187	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAATTTTAGGTTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	52598751	52623944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
tx.5973	chr18	+	2016	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	21	30	21	-30	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	319	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATAAATTATTTG	NA	False	NA	NA	False	NA	NA	NA	53309408	53353907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
tx.5974	chr18	+	1912	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	66	-1	0	1	multi-exon	TRUE	canonical	3	19	junction_3	2.70801280154532	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTTGAGTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	53378799	53523993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
tx.5975	chr18	-	1321	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	82	0	82	0	multi-exon	FALSE	canonical	3	373	junction_3	12.8354976529934	511	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	NA	False	NA	NA	NA	53551105	53539403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
tx.5976	chr18	-	4596	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-42	0	19	0	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	53877661	53814794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
tx.5977	chr18	-	2936	2	FSM	ENSMUSG00000048799.9	ENSMUST00000235928.2	474	2	-136	-2326	-68	2326	multi-exon	FALSE	canonical	3	229	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAACAAAAAACCCTA	NA	False	NA	NA	False	NA	NA	NA	53877748	53874672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_53877420_53877559
tx.5978	chr18	-	1885	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	29	0	29	0	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	503	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	56695352	56659815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
tx.5979	chr18	-	2072	20	FSM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	37	2022	37	0	multi-exon	FALSE	canonical	3	60	junction_19	109.003545140448	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	2891	False	NA	NA	False	NA	NA	NA	56705986	56659815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
tx.598	chr1	-	1798	13	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_10	36.6727267719335	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5228	False	NA	NA	False	NA	NA	NA	171108721	171104564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107846_171107961_171108097_171108247_171108343_171108446
tx.5980	chr18	+	1545	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	189	208	189	-208	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	627	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTCAGCTGTTACA	NA	False	NA	NA	False	NA	NA	NA	56706082	56720576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
tx.5981	chr18	+	1194	4	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	2866	208	2866	-208	3prime_fragment	FALSE	canonical	3	396	junction_3	27.6325090347503	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTCAGCTGTTACA	795	False	NA	NA	False	NA	NA	NA	56708759	56720576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_56709121_56713251_56713373_56717362_56717447_56719948
tx.5982	chr18	-	2336	5	NIC	ENSMUSG00000024592.16	novel	726	6	NA	NA	6	-82	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	31.2329953734828	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGTATGGCATTGGT	NA	False	NA	NA	False	NA	NA	NA	57108434	57088986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108381
tx.5983	chr18	-	1209	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	6	1185	6	596	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTTTGCTTAAATC	NA	False	NA	NA	False	NA	NA	NA	57108434	57090089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
tx.5984	chr18	-	2372	4	ISM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	1882	-5	1760	5	3prime_fragment	FALSE	canonical	3	83	junction_1	12.0277457017791	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGGTAGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	57106558	57088899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455
tx.5985	chr18	-	2382	6	NNC	ENSMUSG00000024592.16	novel	2400	5	NA	NA	6	-82	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	42.9958137497129	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGTATGGCATTGGT	NA	False	NA	NA	False	NA	NA	NA	57108434	57088986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_57090994_57091189_57091260_57091594_57091652_57095472_57095591_57106455_57106557_57108405
tx.5986	chr18	+	1687	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	0	3343	0	378	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTTTTACTGTCATAA	NA	False	NA	NA	False	NA	NA	NA	57487812	57522685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
tx.5987	chr18	+	911	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	-12	-376	-12	376	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTCTTTTTACTGTCAT	NA	False	NA	NA	False	NA	NA	NA	57506951	57522683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
tx.5988	chr18	+	967	5	NIC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	376	combination_of_known_junctions	FALSE	canonical	3	294	junction_1	276.069284781918	551	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTCTTTTTACTGTCAT	NA	False	NA	NA	False	NA	NA	NA	57506951	57522683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522291
tx.5989	chr18	+	3319	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	58	0	44	0	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGGGTCCTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	58792595	58813440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
tx.599	chr1	-	1954	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	37	junction_8	30.7939030135824	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	NA	False	NA	NA	NA	171108761	171104564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171108097_171108247_171108343_171108446
tx.5990	chr18	-	1485	2	NNC	ENSMUSG00000038059.8	novel	1990	2	NA	NA	11782	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTGTTTGTTTGTT	7237	False	NA	NA	False	NA	NA	NA	60622866	60607262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_60608658_60622776
tx.5991	chr18	-	1636	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	350	4	-61	-4	multi-exon	FALSE	canonical	3	18	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	60634709	60607266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_60608658_60634464
tx.5992	chr18	+	2223	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	0	1515	0	-688	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATGCCCTGTTCTATAA	NA	False	NA	NA	False	NA	NA	NA	60659272	60690323	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
tx.5993	chr18	+	1532	2	FSM	ENSMUSG00000024603.9	ENSMUST00000223590.2	1530	2	-8	6	5	-6	multi-exon	FALSE	canonical	3	13	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTTTCTTACAAAGT	NA	False	NA	NA	False	NA	NA	NA	60659277	60661044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_60659438_60659672
tx.5994	chr18	+	466	3	NNC	ENSMUSG00000024603.9	novel	1724	9	NA	NA	5	-4904	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	96.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTAGCAGTAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	60659277	60671136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_60659438_60667664_60667736_60670901
tx.5995	chr18	+	2111	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	17	82	-11	-82	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACTTATGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	60693824	60705800	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
tx.5996	chr18	+	544	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	53	0	-16	0	multi-exon	FALSE	canonical	3	20921	junction_1	2863.01274883644	25218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	-33	True	NA	NA	NA	60907720	60911618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
tx.5997	chr18	+	1243	8	FSM	ENSMUSG00000024610.16	ENSMUST00000050487.16	1224	8	-21	2	-21	-2	multi-exon	FALSE	canonical	3	17	junction_2	5.45108115095397	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTTGCTTCTGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	60936898	60945722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_60937083_60940979_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944930_60944994_60945223
tx.5998	chr18	-	803	2	Genic_Genomic	ENSMUSG00000091957.4	novel	965	1	NA	NA	-15	-3	multi-exon	FALSE	canonical	1	147	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTTGGACCTGCAGAGA	7408	False	NA	NA	False	NA	NA	NA	61393058	61392081	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr18_-_61392484_61392657
tx.5999	chr18	+	2332	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-4	1755	-4	2	multi-exon	TRUE	canonical	0	0	junction_9	613.012254927549	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGAAATTTTTTTAAA	424	False	NA	NA	False	NA	NA	NA	61688340	61721377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
tx.6	chr1	+	1886	4	ISM	ENSMUSG00000033813.16	ENSMUST00000165720.3	2854	10	33919	0	33919	0	3prime_fragment	FALSE	canonical	3	1602	junction_3	172.83711021267	150	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTTTGTCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	4962179	4968132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_4962293_4963639_4963787_4965156_4965229_4966578
tx.60	chr1	-	1777	4	NNC	ENSMUSG00000042215.9	novel	1860	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.2968437932844	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGCATTGGCCATTAT	NA	False	NA	NA	False	NA	NA	NA	33796837	33784564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_33785227_33785270_33786098_33787297_33787408_33796659
tx.600	chr1	-	2179	13	FSM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	36	4	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	116.920794652714	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTCATGTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	171115528	171109522	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
tx.6000	chr18	+	2368	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-43	-2	-4	2	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGAAATTTTTTTAAA	424	False	NA	NA	False	NA	NA	NA	61688340	61721377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
tx.6001	chr18	+	2403	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-406	-775	9	2	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGAAATTTTTTTAAA	437	False	NA	NA	False	NA	NA	NA	61688353	61721377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
tx.6002	chr18	+	1725	9	ISM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	1232	1755	817	2	3prime_fragment	FALSE	canonical	0	0	junction_8	648.901078266171	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGAAATTTTTTTAAA	1660	False	NA	NA	False	NA	NA	NA	61689576	61721377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
tx.6003	chr18	+	1700	9	ISM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	1254	-2	878	2	3prime_fragment	FALSE	canonical	3	816	junction_8	386.220286073893	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGAAATTTTTTTAAA	1721	False	NA	NA	False	NA	NA	NA	61689637	61721377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
tx.6004	chr18	+	1622	8	ISM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	12989	1755	-7254	2	3prime_fragment	FALSE	canonical	0	0	junction_7	688.538825547052	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGAAATTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	61701333	61721377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
tx.6005	chr18	+	644	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	-55	-1	-55	1	multi-exon	FALSE	canonical	3	52	junction_1	11.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATGACTTTCTTAATAGT	NA	False	NA	NA	False	NA	NA	NA	61772668	61780544	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_61772840_61778233_61778437_61780274
tx.6006	chr18	+	859	3	FSM	ENSMUSG00000024578.4	ENSMUST00000025471.4	693	3	-162	-4	-142	4	multi-exon	FALSE	canonical	2	3	junction_1	1.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGGGCTTGTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	61820843	61825613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_61821076_61823188_61823479_61825276
tx.6007	chr18	-	2030	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	-12	-1	-12	1	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTATTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61840718	61829906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
tx.6008	chr18	-	1663	4	ISM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	5269	1	5247	-1	3prime_fragment	FALSE	canonical	3	77	junction_2	4.98887651569859	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTGACTTATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	61835437	61829908	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266
tx.6009	chr18	-	1450	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-2	2590	0	-3	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTTTTACAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	61859396	61848084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
tx.601	chr1	-	962	2	FSM	ENSMUSG00000053483.16	ENSMUST00000153164.2	2706	2	4	1740	0	-1271	multi-exon	FALSE	canonical	3	442	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTAGATCTTATTTTGG	NA	False	NA	NA	False	NA	NA	NA	171115528	171113775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171114544_171115334
tx.6010	chr18	+	904	2	FSM	ENSMUSG00000098702.2	ENSMUST00000184678.2	890	2	-12	-2	-12	2	multi-exon	FALSE	canonical	3	5	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGATCTCTCAGTTTGCAG	NA	False	NA	NA	False	NA	NA	NA	61859491	61868990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_61860074_61868668
tx.6011	chr18	-	1705	5	NNC	ENSMUSG00000033032.16	novel	2842	16	NA	NA	49247	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	5.2618912949623	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCAGAGGGTAGCTGGC	NA	False	NA	NA	False	NA	NA	NA	61870435	61863331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870253
tx.6012	chr18	+	1449	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.6791015146086	128	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTTTCGATGTTGT	NA	False	NA	NA	False	NA	NA	NA	63110937	63130436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
tx.6013	chr18	+	1583	12	NNC	ENSMUSG00000024581.14	novel	1129	13	NA	NA	-12	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	104.516201440908	12	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCGATGTTGTCACTTG	NA	False	NA	NA	False	NA	NA	NA	63110959	63130442	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63125411_63125562_63127382_63127463_63128033_63128164_63129887
tx.6014	chr18	-	2804	9	NNC	ENSMUSG00000024583.4	novel	1998	9	NA	NA	-33	739	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_2	401.332292963076	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGACATCAAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	63825426	63795698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_63797404_63804652_63804758_63806868_63806946_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
tx.6015	chr18	-	1301	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	36	3006	36	0	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	890	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCGTCATTCTATATAA	NA	False	NA	NA	False	NA	NA	NA	63825472	63797170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
tx.6016	chr18	-	2189	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	34	4348	-3	0	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTGTACGCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	64622137	64590332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
tx.6017	chr18	-	2597	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	93	-3	0	0	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	1616	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	NA	NA	NA	64649586	64632725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
tx.6018	chr18	-	2600	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	137	8	0	0	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	2351	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	NA	NA	NA	64649586	64632725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
tx.6019	chr18	+	801	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	35	24	0	0	multi-exon	FALSE	canonical	3	349	junction_3	14.5244621242922	147	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTCCTTTTGTGGCC	NA	False	NA	NA	False	NA	NA	NA	65933620	65950731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
tx.602	chr1	-	856	6	FSM	ENSMUSG00000062963.11	ENSMUST00000111302.4	914	6	207	-149	160	0	multi-exon	FALSE	canonical	3	530	junction_3	38.9943585663362	147	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7527	False	NA	NA	False	NA	NA	NA	171122353	171116135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206
tx.6020	chr18	-	3547	14	FSM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	18	16	0	3	multi-exon	FALSE	canonical	3	538	junction_1	125.2370060817	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	NA	False	NA	NA	NA	66135692	66113824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
tx.6021	chr18	-	1736	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	11	2929	-7	574	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTCATAGTACTACAT	NA	False	NA	NA	False	NA	NA	NA	66135699	66116756	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
tx.6022	chr18	-	888	8	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	-2	10614	-2	-40	5prime_fragment	FALSE	canonical	3	865	junction_5	52.4878994801348	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAAAAGTATCAAGA	NA	False	NA	NA	False	NA	NA	NA	66135694	66126248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
tx.6023	chr18	-	1623	11	FSM	ENSMUSG00000046318.17	ENSMUST00000130300.3	6572	11	835	4114	0	-1296	multi-exon	TRUE	canonical	0	0	junction_9	3.55527776692624	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGCTTGACTATTCAT	NA	False	NA	NA	False	NA	NA	NA	66424903	66194039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_66194592_66198939_66198976_66199653_66199690_66199799_66199940_66204271_66204393_66209378_66209483_66216165_66216319_66217808_66217944_66227068_66227122_66424202_66424284_66424691
tx.6024	chr18	+	2662	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	62	3	2	-3	multi-exon	FALSE	canonical	3	99	junction_2	7	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGTCTTTCTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	66591665	66598628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_66591884_66593913_66594070_66596340
tx.6025	chr18	-	2284	11	FSM	ENSMUSG00000062526.5	ENSMUST00000073054.5	2494	11	205	5	42	-5	multi-exon	FALSE	canonical	3	17	junction_4	12.1016527796826	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGAGTTTGGATCTTT	NA	False	NA	NA	False	NA	NA	NA	67378696	67358118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
tx.6026	chr18	+	1387	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	35	3632	-31	1931	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	1000	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	67422290	67451910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
tx.6027	chr18	-	2451	2	Antisense	novelGene_ENSMUSG00000024525.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTGAAAAAGGCTGGGG	1730	False	NA	NA	False	NA	NA	NA	67437720	67435008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr18_-_67437359_67437619
tx.6028	chr18	+	958	5	FSM	ENSMUSG00000024526.10	ENSMUST00000025404.10	1115	5	155	2	155	-2	multi-exon	FALSE	canonical	1	47	junction_1	40.4042077016738	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTTGCAACTGGTTT	6363	False	NA	NA	False	NA	NA	NA	67476828	67500853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_67476911_67491779_67491925_67493165_67493313_67499444_67499627_67500451
tx.6029	chr18	+	768	4	ISM	ENSMUSG00000024526.10	ENSMUST00000025404.10	1115	5	15203	13	15203	-13	3prime_fragment	FALSE	canonical	3	128	junction_2	7.78888096369861	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTCTTTGATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	67491876	67500842	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_67491925_67493165_67493313_67499444_67499627_67500451
tx.603	chr1	+	1642	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	281	640	18	9	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGGCCCTTTGCAG	1473	False	NA	NA	False	NA	NA	NA	171156993	171169259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
tx.6030	chr18	+	1767	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	606	junction_3	34.2928563989645	195	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTCTCTTGAACTTC	NA	False	NA	NA	False	NA	NA	NA	67523777	67535819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
tx.6031	chr18	-	891	2	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	41767	0	28543	0	3prime_fragment	FALSE	canonical	3	752	junction_1	0	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	8781	False	NA	NA	False	NA	NA	NA	67540475	67537833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_67538585_67540335
tx.6032	chr18	-	2596	14	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	8662	0	-4562	0	3prime_fragment	FALSE	canonical	3	687	junction_13	36.0216897185226	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	NA	False	NA	NA	False	NA	NA	NA	67573580	67537833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511
tx.6033	chr18	+	1078	7	FSM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	0	-19	0	19	multi-exon	FALSE	canonical	3	396	junction_3	27.1871088733041	551	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTCTTTGAATCAGTTA	NA	False	NA	NA	False	NA	NA	NA	67774668	67787251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
tx.6034	chr18	-	1563	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	6	-1	6	0	multi-exon	FALSE	canonical	0	0	junction_7	132.404915801473	284	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGGTTTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	67857652	67798580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
tx.6035	chr18	-	2644	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	22	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATTGTCCCTTACCTT	NA	False	NA	NA	False	NA	NA	NA	67857643	67804282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
tx.6036	chr18	+	1693	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	3	-12	3	12	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTGAAATGATT	NA	False	NA	NA	False	NA	NA	NA	67908047	67925675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
tx.6037	chr18	+	1548	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	111	1883	12	1011	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	313	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTGGTAATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	67908056	67926674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
tx.6038	chr18	+	1416	8	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	4327	1883	4228	1011	3prime_fragment	FALSE	canonical	3	1509	junction_7	135.94476669529	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTGGTAATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	67912272	67926674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
tx.6039	chr18	+	1449	4	FSM	ENSMUSG00000024542.10	ENSMUST00000224387.2	1425	4	-6	-18	0	18	multi-exon	FALSE	canonical	3	112	junction_2	11.1455023315337	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAGAAATTATT	107	False	NA	NA	False	NA	NA	NA	67933176	67938465	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435
tx.604	chr1	+	1601	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	29	-12	29	12	multi-exon	FALSE	canonical	3	102	junction_1	61.0184398358398	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCCCTTTGCAGTCT	1484	False	NA	NA	False	NA	NA	NA	171157004	171169262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
tx.6040	chr18	-	3571	5	NIC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	-15	-6126	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	95.0299294959225	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCGAGTTCTCCATTG	NA	False	NA	NA	False	NA	NA	NA	68433288	68399383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412337_68412500_68433144
tx.6041	chr18	-	2866	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	118	6667	-13	-6667	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAAGTTACATTGTTA	NA	False	NA	NA	False	NA	NA	NA	68433286	68399924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
tx.6042	chr18	+	2058	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	5	2945	5	1	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	242	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	NA	False	NA	NA	NA	68433430	68454978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
tx.6043	chr18	+	2053	5	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	63142	-1160	-4113	15	3prime_fragment	FALSE	canonical	3	43	junction_2	40.9351621469856	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69808656	69817429	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
tx.6044	chr18	+	1232	4	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	65510	-575	-1745	140	3prime_fragment	FALSE	canonical	3	43	junction_1	45.7626728046147	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTTGATTTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	69811024	69816844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_69811189_69814639_69814870_69815753_69815895_69816147
tx.6045	chr18	+	1584	3	FSM	ENSMUSG00000053477.19	ENSMUST00000146908.2	3693	3	1957	152	-724	33	multi-exon	FALSE	canonical	3	123	junction_1	14	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTAAAAAAGAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	69814726	69817447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_69814870_69815753_69815895_69816147
tx.6046	chr18	+	540	2	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTCTGAGTTATTG	NA	False	NA	NA	False	NA	NA	NA	69966631	69967867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr18_+_69966838_69967533
tx.6047	chr18	+	1552	11	FSM	ENSMUSG00000038903.14	ENSMUST00000043929.11	1618	11	66	0	-38	0	multi-exon	FALSE	canonical	3	15	junction_1	8.64869932417586	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCATGTCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	70058602	70102555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
tx.6048	chr18	-	3234	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	-13	-930	11	2	multi-exon	FALSE	canonical	3	72	junction_5	54.5590276672889	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	70605564	70585280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
tx.6049	chr18	-	3510	8	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	8	2	intron_retention	FALSE	canonical	3	98	junction_4	41.1701298496463	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	70605567	70585280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
tx.605	chr1	+	2263	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACTTTTCTGAAACTGA	1658	False	NA	NA	False	NA	NA	NA	171157178	171169899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
tx.6050	chr18	-	2288	4	FSM	ENSMUSG00000044906.7	ENSMUST00000237800.2	4393	4	-2	2107	-2	-2107	multi-exon	FALSE	canonical	3	180	junction_3	21.483844059096	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGATATTGAATTCCTTA	NA	False	NA	NA	False	NA	NA	NA	70605577	70600152	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_70601589_70602519_70602849_70604743_70605051_70605361
tx.6051	chr18	-	2452	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	108.067651422387	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663335	70641755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658414_70658600_70659627_70659793_70661772_70661899_70663258
tx.6052	chr18	-	2300	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	116	junction_8	75.0961883187156	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663341	70641755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
tx.6053	chr18	-	2439	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	151	1	-15	0	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	NA	False	NA	NA	NA	70663354	70641755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
tx.6054	chr18	-	2500	4	FSM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	-16	2487	-16	-2487	multi-exon	FALSE	canonical	3	22	junction_1	4.32049379893857	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGGAGTTTATTATCAGA	NA	False	NA	NA	False	NA	NA	NA	73887566	73870595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_73872372_73875407_73875873_73880237_73880403_73887472
tx.6055	chr18	-	1181	5	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	29605	137	29605	-137	3prime_fragment	FALSE	canonical	3	540	junction_3	46.8641654145254	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCAGTTACATTATCT	9784	False	NA	NA	False	NA	NA	NA	73918904	73903110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765
tx.6056	chr18	-	1986	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-11	663	0	-663	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTCATCTGTGGTTTAT	360	False	NA	NA	False	NA	NA	NA	73948520	73903636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
tx.6057	chr18	-	539	3	NNC	ENSMUSG00000024558.13	novel	4594	6	NA	NA	0	-87547	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	0.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGTTGGTTTTTTTAC	9818	False	NA	NA	False	NA	NA	NA	74198000	74191787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_74192051_74193461_74193648_74197910
tx.6058	chr18	-	1129	7	NNC	ENSMUSG00000036223.17	novel	2630	7	NA	NA	0	-283	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGCCTTTAGGAACGT	6765	False	NA	NA	False	NA	NA	NA	74340850	74329832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
tx.6059	chr18	-	1103	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	39	1463	0	-283	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	326	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGCCTTTAGGAACGT	6765	False	NA	NA	False	NA	NA	NA	74340850	74329832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
tx.606	chr1	+	1580	5	FSM	ENSMUSG00000013973.13	ENSMUST00000129116.8	849	5	11	-742	11	9	multi-exon	FALSE	canonical	3	47	junction_1	84.8038177206663	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGGCCCTTTGCAG	1668	False	NA	NA	False	NA	NA	NA	171157188	171169259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
tx.6060	chr18	-	1166	7	FSM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	0	1464	0	-284	multi-exon	FALSE	canonical	3	11	junction_6	177.375699826354	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTACTGCCTTTAGGAACG	6765	False	NA	NA	False	NA	NA	NA	74340850	74329833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340600
tx.6061	chr18	+	2968	16	FSM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	-114	-16	2	16	multi-exon	FALSE	canonical	3	24	junction_11	21.6794833886788	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	74401247	74415772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
tx.6062	chr18	+	1613	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	-97	0	-97	0	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	246	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	74912170	74939279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
tx.6063	chr18	+	771	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	-1	5	-1	-4	multi-exon	FALSE	canonical	3	6761	junction_1	2088.63605148325	694	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTAAATATGACTGTCTA	NA	False	NA	NA	False	NA	NA	NA	75133546	75136447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
tx.6064	chr18	+	882	3	FSM	ENSMUSG00000036299.6	ENSMUST00000236421.2	524	3	-17	-341	-16	1	multi-exon	FALSE	canonical	3	91	junction_1	354	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75138922	75143005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_75138972_75141721_75141898_75142348
tx.6065	chr18	+	1071	3	FSM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	-23	218	8	1	multi-exon	FALSE	canonical	3	388	junction_1	205.5	326	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75138947	75143005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_75139186_75141721_75141898_75142348
tx.6066	chr18	+	965	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	15	-1	14	1	multi-exon	FALSE	canonical	3	169	junction_1	315	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75138953	75143005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_75139086_75141721_75141898_75142348
tx.6067	chr18	+	2502	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	-44	-2	-40	2	multi-exon	FALSE	canonical	3	162	junction_13	17.5886149255705	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	75151811	75420037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
tx.6068	chr18	-	1597	3	Antisense	novelGene_ENSMUSG00000035765.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGTGTTCATGACTTC	NA	False	NA	NA	False	NA	NA	NA	75328301	75323913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr18_-_75324996_75327096_75327256_75327945
tx.6069	chr18	+	531	2	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	120189	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	8108	False	NA	NA	False	NA	NA	NA	75378684	75420037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_75378869_75419690
tx.607	chr1	-	1338	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	0	-3	0	3	multi-exon	TRUE	canonical	3	74	junction_6	27.0025718939676	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGACATGTCTTTTGG	879	False	NA	NA	False	NA	NA	NA	171173213	171169808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
tx.6070	chr18	+	2102	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	318	5669	-148	0	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATTAACTTGGAAGTCC	NA	False	NA	NA	False	NA	NA	NA	76374968	76438365	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
tx.6071	chr18	+	2016	10	FSM	ENSMUSG00000024563.17	ENSMUST00000091831.13	1645	10	198	-569	-147	5	multi-exon	FALSE	canonical	3	36	junction_2	75.1282031834933	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTGGAAGTCCTTGAC	NA	False	NA	NA	False	NA	NA	NA	76374969	76438370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
tx.6072	chr18	+	1402	3	ISM	ENSMUSG00000024563.17	ENSMUST00000025453.15	2410	11	40956	-429	39585	429	3prime_fragment	FALSE	canonical	3	279	junction_2	1.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCCGACCTTTTGCCTC	NA	False	NA	NA	False	NA	NA	NA	76435147	76438794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_76435288_76435453_76435599_76437677
tx.6073	chr18	+	1382	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	18	2	-10	-2	multi-exon	FALSE	canonical	3	1641	junction_2	78	388	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTCTGATTTATGCC	NA	False	NA	NA	False	NA	NA	NA	77017730	77029306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_77017913_77027263_77027366_77028208
tx.6074	chr18	+	1545	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	28	3904	-7	-2	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTTAATTAGACATTG	NA	False	NA	NA	False	NA	NA	NA	77031815	77059099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
tx.6075	chr18	+	1607	7	FSM	ENSMUSG00000025421.16	ENSMUST00000148955.3	3069	7	-39	1501	14	-4	multi-exon	FALSE	canonical	0	0	junction_2	159.414292542001	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTTTTAATTAGACAT	NA	False	NA	NA	False	NA	NA	NA	77032093	77059097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_77032224_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
tx.6076	chr18	-	1552	6	NNC	ENSMUSG00000025420.14	novel	1674	14	NA	NA	14039	4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	3.26190128606002	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTTTTTTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	77120900	77097732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
tx.6077	chr18	+	2186	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	-100	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	104	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGCCTTATTATTGT	6432	False	NA	-90	True	NA	NA	NA	77126250	77234533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
tx.6078	chr18	+	2947	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	136	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	117	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTTATTTTATTTTG	6432	False	NA	-90	True	NA	NA	NA	77126250	77241168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
tx.6079	chr18	-	1033	2	NNC	ENSMUSG00000097666.3	novel	1269	2	NA	NA	-409	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTCTTCTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	77820848	77817191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr18_-_77818179_77820802
tx.608	chr1	-	1373	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	-2	1670	-2	3	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGACATGTCTTTTGG	876	False	NA	NA	False	NA	NA	NA	171173216	171169808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
tx.6080	chr18	-	1010	9	FSM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	-6	-1	0	0	multi-exon	FALSE	canonical	3	1190	junction_6	88.5180066427165	591	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	False	NA	NA	False	NA	NA	NA	77855486	77845266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
tx.6081	chr18	+	2204	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	267	0	4	0	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	5464	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	False	NA	NA	False	NA	NA	NA	77861695	77870569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
tx.6082	chr18	+	3010	15	NIC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	2	878	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	7.97860659923186	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTATTCTTGTGT	2212	False	NA	NA	False	NA	NA	NA	77877615	77971457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr18_+_77877687_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
tx.6083	chr18	+	2669	9	ISM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	75688	-878	75688	878	3prime_fragment	FALSE	canonical	3	30	junction_2	5.23061898822692	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTATTCTTGTGT	9081	False	NA	NA	False	NA	NA	NA	77957932	77971457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
tx.6084	chr18	-	1381	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	0	-4	0	4	multi-exon	FALSE	canonical	3	236	junction_3	30.0026665481587	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTATACGCACAATG	NA	False	NA	NA	False	NA	NA	NA	80243873	80235475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
tx.6085	chr18	+	729	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	25	3324	25	193	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	766	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	NA	False	NA	NA	NA	80250034	80265746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
tx.6086	chr18	+	1660	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	25	-2	-7	2	multi-exon	FALSE	canonical	3	1096	junction_3	900.996608699993	548	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACGTTTGTTGTGGGAA	NA	False	NA	NA	False	NA	NA	NA	80250037	80255949	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
tx.6087	chr18	-	1132	4	FSM	ENSMUSG00000078963.4	ENSMUST00000237192.2	1104	4	-21	-7	-21	7	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGTGTATGGAGGTTT	NA	False	NA	NA	False	NA	NA	NA	80280069	80272965	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_80273777_80276629_80276725_80278663_80278731_80279910
tx.6088	chr18	+	1881	5	FSM	ENSMUSG00000034006.18	ENSMUST00000129043.8	1864	5	-17	0	-17	0	multi-exon	FALSE	canonical	3	16	junction_1	11.0989864402116	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCATGTGGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	80299481	80335931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_80299534_80299996_80300334_80306634_80306769_80326490_80326708_80334790
tx.609	chr1	-	1924	6	ISM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	-19	-3	-18	3	intron_retention	FALSE	canonical	3	103	junction_4	16.4608626748418	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGACATGTCTTTTGG	860	False	NA	NA	False	NA	NA	NA	171173232	171169808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481
tx.6090	chr18	+	2327	4	ISM	ENSMUSG00000034006.18	ENSMUST00000123750.8	2004	5	1039	9	0	0	3prime_fragment	FALSE	canonical	3	25	junction_2	8.2192186706253	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCATGTGGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	80299498	80335931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_80300334_80306634_80306769_80326490_80326708_80334790
tx.6093	chr18	-	399	3	Antisense	novelGene_ENSMUSG00000097738.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	20	junction_2	4.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTTCCTATATTTTC	NA	False	NA	NA	False	NA	NA	NA	82883988	82873436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr18_-_82873610_82875076_82875202_82883887
tx.6095	chr18	-	1826	10	ISM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	1085	0	-134	0	3prime_fragment	FALSE	canonical	3	554	junction_9	37.548322774924	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	NA	False	NA	NA	NA	84699099	84685593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059
tx.6096	chr18	-	2066	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	54	4	-21	0	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	NA	False	NA	NA	NA	84703773	84685593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
tx.6097	chr18	+	807	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	21	5	-18	0	multi-exon	FALSE	canonical	3	946	junction_4	54.2425110038243	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATATGTGTCTGTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	84869483	84897991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
tx.6098	chr18	+	534	4	ISM	ENSMUSG00000024646.15	ENSMUST00000235254.2	1170	6	16558	2	-6074	0	3prime_fragment	FALSE	canonical	3	946	junction_3	57.7138535265918	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATATGTGTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	84889651	84897989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr18_+_84889759_84891264_84891295_84895951_84895987_84897627
tx.6099	chr18	+	1781	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	129	0	-117	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	251	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	929	False	NA	NA	False	NA	NA	NA	84953035	84999598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
tx.61	chr1	-	808	2	NNC	ENSMUSG00000042215.9	novel	1860	3	NA	NA	2384	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGCATTGGCCATTAT	NA	False	NA	NA	False	NA	NA	NA	33785416	33784564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_33785227_33785270
tx.610	chr1	+	622	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	29	1084	29	200	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	1067	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	NA	False	NA	NA	NA	171173266	171185738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
tx.6100	chr18	-	1317	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	8	1093	-3	-2	multi-exon	FALSE	canonical	3	52	junction_4	6.15142259969188	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAAGCATTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	84969641	84965408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
tx.6101	chr18	+	3515	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	40	1056	-3	-1056	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTGAGGATATTTTTA	4782	False	NA	NA	False	NA	NA	NA	90528317	90560335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
tx.6103	chr19	+	817	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	-15	0	-10	0	multi-exon	FALSE	canonical	3	1715	junction_6	72.3058703625708	275	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGACTTGCTGTTAAA	7356	False	NA	NA	False	NA	NA	NA	3333044	3341201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
tx.6104	chr19	+	1914	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	-33	1	7	0	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	3758299	3767880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
tx.6106	chr19	+	1729	9	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	118.906935773318	2	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAGAATTGACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	3818135	3855465	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
tx.6107	chr19	+	1690	8	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-7	46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	99.3606089566932	7	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCTTGATGAAAACCAAG	NA	False	NA	NA	False	NA	NA	NA	3818158	3855509	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
tx.6108	chr19	-	2632	20	FSM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	56	0	35	0	multi-exon	FALSE	canonical	3	39	junction_12	8.58007741992203	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	3957077	3946049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
tx.6109	chr19	-	770	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	10	0	4	0	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	282	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	NA	False	NA	NA	NA	3962764	3958866	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
tx.611	chr1	-	1288	4	FSM	ENSMUSG00000045259.5	ENSMUST00000061878.5	1558	4	-1	271	-1	-271	multi-exon	FALSE	canonical	3	17	junction_1	1.88561808316413	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTGTCTCTGAATCCT	7870	False	NA	NA	False	NA	NA	NA	171188367	171186284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171186549_171187022_171187222_171187309_171187470_171187702
tx.6110	chr19	+	1345	8	FSM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	-59	-2	-59	0	multi-exon	FALSE	canonical	3	15	junction_1	10.3332236114429	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACAGTTCTTGTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	4036510	4040007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4036612_4036822_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
tx.6111	chr19	+	775	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	12	0	12	0	multi-exon	FALSE	canonical	3	59	junction_1	10.4243305140746	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	3525	False	NA	NA	False	NA	NA	NA	4050591	4052103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
tx.6112	chr19	+	1121	3	FSM	ENSMUSG00000110949.2	ENSMUST00000122924.2	1082	3	-37	-2	14	0	multi-exon	FALSE	canonical	3	76	junction_1	4	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	3527	False	NA	NA	False	NA	NA	NA	4050593	4052103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4051329_4051627_4051706_4051795
tx.6113	chr19	-	1551	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	107	3	-2	2	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	489	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTGGAACTTTGCTT	6533	False	NA	NA	False	NA	NA	NA	4062699	4057499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
tx.6114	chr19	-	776	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	45	0	-15	0	multi-exon	FALSE	canonical	3	1999	junction_6	828.939215034626	336	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	4087940	4085406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
tx.6115	chr19	-	468	2	FSM	ENSMUSG00000038155.12	ENSMUST00000237565.2	429	2	-37	-2	-37	0	multi-exon	FALSE	canonical	3	3855	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCCGTT	NA	False	NA	NA	False	NA	NA	NA	4090920	4090284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4090540_4090707
tx.6116	chr19	-	780	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	17	0	17	0	multi-exon	FALSE	canonical	3	1174	junction_6	961.706469424706	294	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCCGTT	NA	False	NA	NA	False	NA	NA	NA	4092246	4090284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
tx.6117	chr19	+	932	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	146	2	-73	-2	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCTTTCTGTGTGTGG	7022	False	NA	NA	False	NA	NA	NA	4147327	4149015	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
tx.6118	chr19	+	1059	4	FSM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	22	8	21	1	multi-exon	TRUE	canonical	3	90	junction_1	272.960721635102	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCAGCCTTTCTGTGT	7117	False	NA	NA	False	NA	NA	NA	4147422	4149011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4147734_4147816_4147918_4148004_4148138_4148497
tx.6119	chr19	-	1242	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	22	-3	22	3	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGCAGAACTAATCTAT	3924	False	NA	NA	False	NA	NA	NA	4171553	4164460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
tx.612	chr1	+	2640	2	ISM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	18555	0	18510	0	3prime_fragment	FALSE	canonical	3	23	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTATGTACTTTGTCTT	2933	False	NA	NA	False	NA	NA	NA	171235076	171237808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_171235204_171235295
tx.6120	chr19	+	945	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	-2	-5	-2	0	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTTGCACTTTCCTGG	4368	False	NA	NA	False	NA	NA	NA	4175956	4181731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
tx.6121	chr19	+	900	6	FSM	ENSMUSG00000024845.20	ENSMUST00000169055.10	1476	6	23	553	-2	0	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTTGCACTTTCCTGG	4368	False	NA	NA	False	NA	NA	NA	4175956	4181731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
tx.6122	chr19	+	1065	6	FSM	ENSMUSG00000024845.20	ENSMUST00000130619.11	1615	6	-3	553	-2	0	multi-exon	FALSE	canonical	3	568	junction_2	76.3952878127964	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTTGCACTTTCCTGG	4368	False	NA	NA	False	NA	NA	NA	4175956	4181731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181029_4181075_4181227_4181282_4181360
tx.6123	chr19	+	1871	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	402	junction_1	75.9439925208044	174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3585	False	NA	NA	False	NA	NA	NA	4198627	4204034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
tx.6124	chr19	-	1762	15	FSM	ENSMUSG00000024830.18	ENSMUST00000025749.15	4586	15	23	2801	-1	0	multi-exon	FALSE	canonical	2	38	junction_6	17.8245416691225	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGCTTTTGCCGGACTC	2772	False	NA	NA	False	NA	NA	NA	4213330	4206790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
tx.6125	chr19	-	881	2	FSM	ENSMUSG00000040247.7	ENSMUST00000238094.2	878	2	5	-8	5	8	multi-exon	FALSE	canonical	2	2	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACTCTCCACCCTGGCC	NA	False	NA	NA	False	NA	NA	NA	4235526	4234367	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4235073_4235350
tx.6126	chr19	+	1389	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	84	0	-10	0	multi-exon	TRUE	canonical	3	3675	junction_3	183.825475806689	1206	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3361	False	NA	NA	False	NA	NA	NA	4242147	4245419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
tx.6127	chr19	-	2006	11	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	128.010155847105	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	6001	False	NA	NA	False	NA	NA	NA	4251632	4245194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4250985_4251327_4251399_4251481
tx.6128	chr19	-	2157	10	FSM	ENSMUSG00000024824.8	ENSMUST00000237467.2	2101	10	-32	-24	-3	0	multi-exon	FALSE	canonical	3	364	junction_3	31.4889751429854	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5995	False	NA	NA	False	NA	NA	NA	4251638	4245194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
tx.6129	chr19	-	2087	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	220	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5992	False	NA	NA	False	NA	NA	NA	4251641	4245194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
tx.613	chr1	+	1754	10	FSM	ENSMUSG00000026641.14	ENSMUST00000001284.13	1115	10	-1	-638	-1	2	multi-exon	FALSE	canonical	3	42	junction_4	49.4805111903093	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6736	False	NA	NA	False	NA	NA	NA	171238879	171246327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
tx.6130	chr19	+	893	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	18	2	18	1	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACCTTACATCTCT	NA	False	NA	NA	False	NA	NA	NA	4281970	4283686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
tx.6131	chr19	-	2150	15	FSM	ENSMUSG00000005986.17	ENSMUST00000056888.13	2139	15	-11	0	-9	0	multi-exon	FALSE	canonical	2	3	junction_3	4.70128076340124	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGCTGTCCTGCGTGGT	849	False	NA	NA	False	NA	NA	NA	4333174	4320207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
tx.6132	chr19	-	1881	18	ISM	ENSMUSG00000024858.15	ENSMUST00000025791.12	3182	22	13331	1003	-813	-385	3prime_fragment	FALSE	canonical	3	203	junction_10	28.1991189830229	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTTGTAATTATT	NA	False	NA	NA	False	NA	NA	NA	4342652	4337031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571
tx.6133	chr19	-	1341	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	8	-5	-3	5	multi-exon	FALSE	canonical	3	9	junction_1	4.02336923485777	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAGCTTAGCAAGTG	9156	False	NA	NA	False	NA	NA	NA	4489452	4475481	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
tx.6134	chr19	-	1449	8	FSM	ENSMUSG00000024889.6	ENSMUST00000225476.2	1455	8	4	2	3	0	multi-exon	FALSE	canonical	3	51	junction_4	109.573011722592	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTTGGAACCTTGGG	NA	False	NA	NA	False	NA	NA	NA	4675665	4672620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675125_4675220_4675324_4675460
tx.6135	chr19	-	1424	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	3	-2	3	0	multi-exon	FALSE	canonical	3	266	junction_6	48.136286113662	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTTGGAACCTTGGG	NA	False	NA	NA	False	NA	NA	NA	4675665	4672620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
tx.6136	chr19	+	1909	3	FSM	ENSMUSG00000033760.18	ENSMUST00000183008.2	1211	3	-34	-664	-13	23	multi-exon	FALSE	canonical	1	3	junction_2	39	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGCTGTTTTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	4806557	4811393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4806690_4807273_4807698_4810040
tx.6137	chr19	+	1809	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	-26	0	2	0	multi-exon	FALSE	canonical	3	32	junction_3	20.1163283594862	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTAACTGAGTGGC	NA	False	NA	NA	False	NA	NA	NA	4806572	4815968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
tx.6138	chr19	+	2104	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-18	2108	4	-1467	multi-exon	FALSE	canonical	3	81	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACCTAAATTTGC	NA	False	NA	NA	False	NA	NA	NA	4806574	4809262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4806690_4807273
tx.6139	chr19	-	1729	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	21	860	0	0	multi-exon	TRUE	canonical	3	26	junction_3	29.8923996285938	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	4843908	4835180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
tx.614	chr1	+	1784	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	0	383	0	2	multi-exon	FALSE	canonical	3	185	junction_1	10.3363197596069	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	NA	False	NA	NA	NA	171238880	171246327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
tx.6140	chr19	-	854	2	FSM	ENSMUSG00000096370.9	ENSMUST00000178404.2	456	2	-398	0	2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	7789	False	NA	NA	False	NA	NA	NA	4861638	4835180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4835596_4861199
tx.6141	chr19	-	2781	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	31	353	-18	0	multi-exon	FALSE	canonical	3	363	junction_1	19	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	7796	False	NA	NA	False	NA	NA	NA	4861631	4850949	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4851834_4852578_4854044_4861199
tx.6142	chr19	-	1038	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	29	0	-16	0	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	496	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	4889331	4875393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
tx.6143	chr19	+	1939	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	35	6	3	1	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGTGTAAGTGC	NA	False	NA	NA	False	NA	NA	NA	4905192	4910940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
tx.6144	chr19	+	2526	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	30	2	-2	0	multi-exon	TRUE	canonical	3	97	junction_1	34	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	4928729	4935423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4929058_4930148_4930427_4933503
tx.6145	chr19	+	3617	2	FSM	ENSMUSG00000006463.14	ENSMUST00000162754.2	939	2	-1065	-1613	-2	0	multi-exon	FALSE	canonical	3	165	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	4928729	4935423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_4930427_4933503
tx.6146	chr19	-	2648	18	FSM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	35	0	-5	0	multi-exon	TRUE	canonical	3	495	junction_17	96.7659038009169	343	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	4978280	4957256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
tx.6147	chr19	+	815	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	179	2051	-4	4	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	212	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGCTTCTCTCCTGAG	3722	False	NA	NA	False	NA	NA	NA	5012353	5014976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
tx.6148	chr19	-	353	3	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	1.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGGATGACCCAAGTT	3371	False	NA	NA	False	NA	NA	NA	5069139	5067463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr19_-_5067699_5068325_5068385_5069080
tx.6149	chr19	+	2378	12	FSM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	238	3	-16	0	multi-exon	FALSE	canonical	3	72	junction_1	10.4311992290135	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4296	False	NA	NA	False	NA	NA	NA	5074125	5081997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
tx.615	chr1	-	1060	3	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGACCCTGCTTGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	171264877	171250750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_171251630_171258736_171258850_171264809
tx.6150	chr19	+	2291	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	-25	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	23.4795655837156	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACGGATTCCTGGAGTGTT	4244	False	NA	NA	False	NA	NA	NA	5074073	5081993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
tx.6151	chr19	+	2026	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	8	-2	8	2	multi-exon	FALSE	canonical	3	75	junction_1	0	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTCTGTTACTCTCCT	210	False	NA	NA	False	NA	NA	NA	5088861	5091161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5090061_5090334
tx.6152	chr19	+	1374	10	FSM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	9	5	9	-5	multi-exon	FALSE	canonical	3	224	junction_4	16.1528195757556	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGGCTGATGTGT	2739	False	NA	NA	False	NA	NA	NA	5091390	5099940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
tx.6153	chr19	+	1144	9	ISM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	4641	5	-126	-5	3prime_fragment	FALSE	canonical	3	224	junction_3	17.0806908525387	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGGCTGATGTGT	7371	False	NA	NA	False	NA	NA	NA	5096022	5099940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
tx.6154	chr19	+	1116	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	-4	376	3	0	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	False	NA	NA	False	NA	NA	NA	5138568	5142533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
tx.6155	chr19	-	1859	6	FSM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	54	0	-13	0	multi-exon	FALSE	canonical	3	994	junction_1	78.6628247649422	301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGTGACTGAGTGTGG	1555	False	NA	NA	False	NA	NA	NA	5157046	5149232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
tx.6156	chr19	-	1931	5	FSM	ENSMUSG00000024870.7	ENSMUST00000236149.2	757	5	9	-1183	9	0	multi-exon	FALSE	canonical	3	1015	junction_3	67.2434941090958	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGTGACTGAGTGTGG	1577	False	NA	NA	False	NA	NA	NA	5157024	5149232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
tx.6157	chr19	-	2934	16	NIC	ENSMUSG00000024862.17	novel	2940	16	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	17.0507738501479	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	5168316	5157773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
tx.6158	chr19	-	3189	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	33	0	-14	0	multi-exon	TRUE	canonical	3	1448	junction_15	340.757138589935	274	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3899	False	NA	NA	False	NA	NA	NA	5345450	5323959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
tx.6159	chr19	-	823	5	ISM	ENSMUSG00000024853.11	ENSMUST00000235182.2	933	9	-16	3850	-11	81	5prime_fragment	FALSE	canonical	3	1668	junction_1	98.2445927265211	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTGTTTTTTCTG	3902	False	NA	NA	False	NA	NA	NA	5345447	5341150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
tx.616	chr1	+	350	2	Genic_Genomic	ENSMUSG00000059058.8	novel	195	1	NA	NA	-7	225	multi-exon	TRUE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAATAAAGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	171538648	171539075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr1_+_171538964_171539040
tx.6160	chr19	-	503	2	FSM	ENSMUSG00000118263.2	ENSMUST00000235637.2	405	2	-98	0	-98	0	multi-exon	FALSE	canonical	3	25	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTTCTTTACTCTTTA	9102	False	NA	NA	False	NA	NA	NA	5357542	5355905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5356162_5357295
tx.6161	chr19	-	745	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	514	2	-48	0	multi-exon	FALSE	canonical	3	4588	junction_2	727	2520	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8695	False	NA	NA	False	NA	NA	NA	5416682	5414667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5415187_5415845_5415985_5416595
tx.6162	chr19	+	1038	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	240	1278	36	-1278	multi-exon	TRUE	canonical	3	703	junction_2	59.7581793564697	706	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTCTGAGTGGCTC	2032	False	NA	NA	False	NA	NA	NA	5417008	5420276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
tx.6163	chr19	+	809	5	ISM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	1316	1278	1035	-1278	3prime_fragment	FALSE	canonical	3	703	junction_1	61.8036204441131	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTCTGAGTGGCTC	3108	False	NA	NA	False	NA	NA	NA	5418084	5420276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
tx.6164	chr19	-	1614	13	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	4653	2536	-804	0	3prime_fragment	FALSE	canonical	3	368	junction_1	54.3222764823256	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	NA	False	NA	NA	False	NA	NA	NA	5434078	5430086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962
tx.6165	chr19	-	844	6	ISM	ENSMUSG00000039330.6	ENSMUST00000235569.2	1726	8	2138	-2	2138	2	3prime_fragment	TRUE	canonical	3	37	junction_4	4.9152822909778	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTGTGAGACTTCTGA	7122	False	NA	NA	False	NA	NA	NA	5450416	5440074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5440226_5440636_5440756_5440941_5441042_5444310_5444482_5449940_5450089_5450261
tx.6166	chr19	-	856	6	FSM	ENSMUSG00000024914.17	ENSMUST00000136579.3	734	6	-87	-35	-58	1	multi-exon	TRUE	canonical	3	999	junction_1	82.8700187039921	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTGGTTTCTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	5474629	5472835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388
tx.6167	chr19	-	799	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	196	-3	4	1	multi-exon	FALSE	canonical	3	999	junction_1	76.7282361469506	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTGGTTTCTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	5474811	5472835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
tx.6168	chr19	-	449	4	ISM	ENSMUSG00000024914.17	ENSMUST00000136579.3	734	6	693	-33	102	-1	3prime_fragment	FALSE	canonical	3	999	junction_1	13.0724477007517	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTTTGGTTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	5473849	5472837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799
tx.6169	chr19	+	1467	2	FSM	ENSMUSG00000047423.11	ENSMUST00000159759.3	1528	2	65	-4	52	4	multi-exon	FALSE	canonical	3	164	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCCTGATGGTTATCT	312	False	NA	NA	False	NA	NA	NA	5475236	5477345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5475337_5475978
tx.617	chr1	-	2278	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	9	3411	9	58	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGAACCACCCTGCCCT	NA	False	NA	NA	False	NA	NA	NA	171854853	171831937	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
tx.6170	chr19	+	1240	10	FSM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	-22	-3	-8	1	multi-exon	FALSE	canonical	3	40	junction_5	35.2423706830007	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	NA	False	NA	NA	NA	5510634	5515080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
tx.6171	chr19	+	1210	10	FSM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	0	-1	0	1	multi-exon	FALSE	canonical	3	126	junction_5	12.1837779216647	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	NA	False	NA	NA	NA	5510643	5515080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
tx.6172	chr19	+	1989	11	FSM	ENSMUSG00000024909.16	ENSMUST00000166303.9	2634	11	-19	664	-19	0	multi-exon	FALSE	canonical	2	4	junction_1	23.5805004187782	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	5523962	5531881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5524482_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
tx.6173	chr19	+	1839	11	NIC	ENSMUSG00000024909.16	novel	2634	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	23.0008695487801	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	5523982	5531881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_5524352_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
tx.6174	chr19	+	1558	11	FSM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	-1	0	-1	0	multi-exon	FALSE	canonical	3	63	junction_1	7.8873316146844	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	5524714	5531881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
tx.6175	chr19	-	1711	15	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	448	4	-19	4	3prime_fragment	FALSE	canonical	3	83	junction_4	10.1992896911541	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCCAAGGTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	5537982	5532863	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789
tx.6176	chr19	-	1994	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	69	4	-22	4	multi-exon	FALSE	canonical	3	74	junction_15	11.5573930163049	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCCAAGGTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	5538361	5532863	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
tx.6177	chr19	+	1120	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	66	1168	5	4	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	6020	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTGGGTTTGGGATT	NA	False	NA	NA	False	NA	NA	NA	5540548	5544061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
tx.6178	chr19	+	623	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	2	501	2	0	multi-exon	FALSE	canonical	3	228	junction_3	35.9845645921816	176	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTCTGTGGGCACCTT	5047	False	NA	NA	False	NA	NA	NA	5651902	5652966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
tx.6179	chr19	-	1809	13	FSM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	-19	-404	0	0	multi-exon	FALSE	canonical	3	222	junction_9	61.0948147463342	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCAGGAGTTCTTACCA	3629	False	NA	NA	False	NA	NA	NA	5660076	5653041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
tx.618	chr1	-	2839	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	56	6	56	-6	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9052	False	NA	NA	False	NA	NA	NA	171910306	171893585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
tx.6180	chr19	-	2053	13	ISM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	198	2	-4	0	intron_retention	FALSE	canonical	3	118	junction_10	98.9692362414817	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3638	False	NA	NA	False	NA	NA	NA	5660067	5653043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879
tx.6181	chr19	-	1960	14	FSM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	192	2	-1	0	multi-exon	FALSE	canonical	3	118	junction_10	96.4922046702747	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3632	False	NA	NA	False	NA	NA	NA	5660073	5653043	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
tx.6182	chr19	+	2449	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	268	-1	32	1	multi-exon	FALSE	canonical	3	73	junction_5	8.59069263796581	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGAGTAGCTGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	5687778	5698159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
tx.6183	chr19	-	1387	8	ISM	ENSMUSG00000056917.14	ENSMUST00000236006.2	3513	16	7301	-3	503	0	3prime_fragment	TRUE	canonical	3	60	junction_4	8.27832182540024	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTTGTGTTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	5704362	5701215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026
tx.6184	chr19	-	692	2	ISM	ENSMUSG00000054874.13	ENSMUST00000146638.2	3159	13	8540	-3	791	0	3prime_fragment	FALSE	canonical	3	108	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	6397	False	NA	NA	False	NA	NA	NA	5715435	5714662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5715276_5715356
tx.6185	chr19	-	690	4	FSM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	4	5	4	-1	multi-exon	FALSE	canonical	3	466	junction_2	15.6276108929747	184	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGGTTTGTTCTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	5781751	5780335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
tx.6186	chr19	-	2119	15	ISM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	1062	76	-65	0	3prime_fragment	FALSE	canonical	3	227	junction_12	27.3276603537179	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9391	False	NA	NA	False	NA	NA	NA	5820385	5808454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230
tx.6187	chr19	-	2624	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	31	76	10	0	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9920	False	NA	NA	False	NA	NA	NA	5821416	5808454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
tx.6188	chr19	-	2953	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	14	1537	14	-1537	multi-exon	FALSE	canonical	3	167	junction_1	18.6118241986109	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGAATGGTTATAATAT	4349	False	NA	NA	False	NA	NA	NA	5925288	5901266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
tx.6189	chr19	+	2104	6	FSM	ENSMUSG00000024818.16	ENSMUST00000025732.14	2480	6	378	-2	334	2	multi-exon	FALSE	canonical	1	1	junction_4	2.63818119165458	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGATCCCTTTCTGTCT	3244	False	NA	NA	False	NA	NA	NA	5928222	5935796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5930467_5930654_5934372_5934632_5934750
tx.619	chr1	+	4343	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	280	-1	4	1	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTGCCGTTTCCC	3044	False	NA	NA	False	NA	NA	NA	171910375	171949893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
tx.6190	chr19	-	2398	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	57	859	-7	12	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGACTCCT	1329	False	NA	NA	False	NA	NA	NA	5962842	5947402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
tx.6191	chr19	-	284	3	ISM	ENSMUSG00000024826.16	ENSMUST00000142995.8	725	4	-39	1451	-1	-1040	5prime_fragment	FALSE	canonical	3	781	junction_2	34.5	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGCCCACCCACCTGAGG	1335	False	NA	NA	False	NA	NA	NA	5962836	5956604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_5956660_5957028_5957190_5962768
tx.6192	chr19	+	518	2	FSM	ENSMUSG00000110156.3	ENSMUST00000210917.2	410	2	-103	-5	28	2	multi-exon	FALSE	canonical	3	17	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACACTACACAGCGGCT	9252	False	NA	NA	False	NA	NA	NA	5962877	5964859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_5963101_5964564
tx.6193	chr19	-	1500	2	FSM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	-1	1912	-1	-1912	multi-exon	FALSE	canonical	3	11	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTCCCAGGGGTAT	NA	False	NA	NA	False	NA	NA	NA	5974845	5967575	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5969022_5974791
tx.6194	chr19	-	2394	18	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	37	junction_17	91.7598792094124	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTTAATCTTTTTTTT	1620	False	NA	NA	False	NA	NA	NA	6014236	5990573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
tx.6195	chr19	-	2417	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	0	4	0	-4	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTTAATCTTTTTTTT	1626	False	NA	NA	False	NA	NA	NA	6014230	5990573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
tx.6196	chr19	-	2420	18	FSM	ENSMUSG00000024833.16	ENSMUST00000165143.3	2391	18	0	-29	0	29	multi-exon	FALSE	canonical	3	24	junction_1	92.2413338358681	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGACTATGTTGCACC	1626	False	NA	NA	False	NA	NA	NA	6014230	5991105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
tx.6197	chr19	-	1325	5	NIC	ENSMUSG00000037451.9	novel	1897	10	NA	NA	4458	517	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	1.92028643696715	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATTTCTTCTTCTATT	NA	False	NA	NA	False	NA	NA	NA	6031713	6019744	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_6020582_6021426_6021634_6021746_6021856_6030387_6030504_6031657
tx.6198	chr19	-	1585	8	NIC	ENSMUSG00000037451.9	novel	1897	10	NA	NA	-7	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	2.66496544373966	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCTGGGTCTTTGCAA	8717	False	NA	NA	False	NA	NA	NA	6036178	6020256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_6020582_6021426_6021634_6021746_6021856_6022883_6023099_6030387_6030504_6031657_6031782_6035607_6035712_6035793
tx.6199	chr19	-	1757	11	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	17374	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	67.3628977999017	3	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	9893	False	NA	NA	False	NA	NA	NA	6047859	6038572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709
tx.62	chr1	-	2491	6	ISM	ENSMUSG00000042197.14	ENSMUST00000139143.8	3578	13	36816	0	6368	0	3prime_fragment	FALSE	canonical	3	264	junction_2	25.1284699096463	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	33816650	33800625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349
tx.620	chr1	+	2647	17	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	27913	3	-1446	-1	3prime_fragment	FALSE	canonical	3	813	junction_8	81.7293551913876	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTTGCCGTTTCCCT	NA	False	NA	NA	False	NA	NA	NA	171938311	171949894	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
tx.6200	chr19	-	3041	21	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	17	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	51.2800887284724	9	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	2614	False	NA	NA	False	NA	NA	NA	6065216	6038572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
tx.6201	chr19	-	3028	21	NNC	ENSMUSG00000024942.20	novel	3122	22	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	60.7794990107684	2	1	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	1997	False	NA	NA	False	NA	NA	NA	6065833	6038572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065765
tx.6202	chr19	+	2997	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	467	0	-18	0	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAGAACGTGTCACCTA	1206	False	NA	NA	False	NA	NA	NA	6097072	6103742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
tx.6203	chr19	-	1313	3	FSM	ENSMUSG00000007338.11	ENSMUST00000235520.2	1311	3	3	-5	3	5	multi-exon	FALSE	canonical	3	20	junction_2	445.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTTCAGAACCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	6107785	6103921	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6105013_6105105_6105231_6107688
tx.6204	chr19	-	1467	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	27	270	0	5	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	400	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTTCAGAACCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	6107788	6103921	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
tx.6205	chr19	+	557	5	FSM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	56	0	-42	0	multi-exon	FALSE	canonical	3	11442	junction_1	1294.53167207295	1013	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1038	False	NA	NA	False	NA	NA	NA	6107929	6109549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
tx.6206	chr19	-	1208	4	Fusion	ENSMUSG00000024799.17_ENSMUSG00000024797.15	novel	1443	5	NA	NA	-5	9	multi-exon	FALSE	canonical	3	213	junction_3	30.6847772609735	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGCGCGCATTTGGCTTA	9943	False	NA	NA	False	NA	NA	NA	6117890	6116149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr19_-_6116445_6116528_6117053_6117152_6117350_6117698
tx.6207	chr19	-	928	5	FSM	ENSMUSG00000024799.17_ENSMUSG00000024797.15	ENSMUST00000160354.8	1443	5	-84	599	-5	3	multi-exon	FALSE	canonical	3	213	junction_4	26.5988721565408	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGAGCGCGCGCATTT	9943	False	NA	NA	False	NA	NA	NA	6117890	6116155	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
tx.6208	chr19	-	2516	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	11	148	11	0	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTGCCTGCAGGGGC	998	False	NA	NA	False	NA	NA	NA	6127250	6118019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
tx.6209	chr19	-	1646	6	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	6177	149	-1356	-1	3prime_fragment	FALSE	canonical	3	134	junction_3	10.303397497913	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	7164	False	NA	NA	False	NA	NA	NA	6121084	6118020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468
tx.621	chr1	+	2169	14	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	30289	5	930	0	3prime_fragment	FALSE	canonical	3	813	junction_5	90.4020605095852	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	NA	False	NA	NA	False	NA	NA	NA	171940687	171949892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
tx.6210	chr19	-	1345	8	FSM	ENSMUSG00000024792.10	ENSMUST00000160977.8	922	8	-16	-407	-4	1	multi-exon	FALSE	canonical	3	381	junction_7	88.3658905474556	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCAGCTTTTTCC	6452	False	NA	NA	False	NA	NA	NA	6134961	6130790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
tx.6211	chr19	-	1291	8	FSM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	-4	0	-3	0	multi-exon	FALSE	canonical	3	219	junction_7	142.172789382555	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGAAGCAGCTTTTTC	6436	False	NA	NA	False	NA	NA	NA	6134977	6130791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
tx.6212	chr19	+	1957	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	63	4	63	-4	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	374	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCAGACTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	6135075	6141803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
tx.6213	chr19	-	1599	8	FSM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	36	0	36	0	multi-exon	FALSE	canonical	3	79	junction_5	6.49018096662888	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCCATTTGCTTATTA	NA	False	NA	NA	False	NA	NA	NA	6178298	6169428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
tx.6214	chr19	-	880	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	404	2	-4	1	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	544	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGCCATTTGT	NA	False	NA	NA	False	NA	NA	NA	6191174	6184414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
tx.6215	chr19	+	1698	11	FSM	ENSMUSG00000024786.10	ENSMUST00000113528.2	1562	11	-131	-5	-52	5	multi-exon	FALSE	canonical	3	12	junction_2	3.41906419945575	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTGAGGTTTAAGCCT	7986	False	NA	NA	False	NA	NA	NA	6234365	6274260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6234613_6245693_6245811_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
tx.6216	chr19	+	2008	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	148	1197	-52	539	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTTCTTGCCTCTTC	NA	False	NA	NA	False	NA	NA	NA	6326902	6348929	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
tx.6217	chr19	+	2619	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113504.10	2663	10	42	2	8	0	multi-exon	TRUE	canonical	3	66	junction_1	106.997403914508	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	596	False	NA	NA	False	NA	NA	NA	6385050	6390919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
tx.6218	chr19	+	2976	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	360	junction_3	26.9153766460735	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	613	False	NA	NA	False	NA	NA	NA	6385067	6390919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
tx.6219	chr19	+	3297	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	222	834	-10	0	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	824	False	NA	NA	False	NA	NA	NA	6413941	6427226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
tx.622	chr1	+	1917	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	NA	False	NA	NA	NA	171954321	171962850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
tx.6220	chr19	+	2651	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	-1	-1	-1	1	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	833	False	NA	NA	False	NA	NA	NA	6413950	6427227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
tx.6221	chr19	+	1646	6	ISM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	8661	-7	170	0	3prime_fragment	FALSE	canonical	3	364	junction_5	320.526067582654	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	3841	False	NA	NA	False	NA	NA	NA	6422612	6427233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
tx.6222	chr19	+	2919	20	FSM	ENSMUSG00000032648.15	ENSMUST00000035269.15	2874	20	-49	4	-49	-4	multi-exon	TRUE	canonical	1	1	junction_8	7.04005162408672	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTCTTCTCTGTTGCAA	NA	False	NA	NA	False	NA	NA	NA	6434379	6448485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6434752_6435714_6435817_6435895_6435975_6436053_6436158_6436403_6436536_6438092_6438205_6438296_6438380_6438766_6438911_6439189_6439283_6439485_6439633_6439802_6439967_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
tx.6223	chr19	+	720	5	NIC	ENSMUSG00000032946.17	novel	573	5	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	118.986081118759	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGGGTCATGTCACT	NA	False	NA	NA	False	NA	NA	NA	6449348	6453668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_6449548_6451745_6451894_6452501_6452605_6453053_6453117_6453461
tx.6224	chr19	+	614	5	NIC	ENSMUSG00000032946.17	novel	2124	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.357558422953	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGGGTCATGTCACT	NA	False	NA	NA	False	NA	NA	NA	6449901	6453668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_6449995_6451745_6451894_6452501_6452605_6453053_6453117_6453461
tx.6225	chr19	+	566	4	FSM	ENSMUSG00000032946.17	ENSMUST00000113471.3	535	4	-31	0	-24	0	multi-exon	FALSE	canonical	0	0	junction_2	116.70761186258	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGGGTCATGTCACT	NA	False	NA	NA	False	NA	NA	NA	6451700	6453668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6451894_6452501_6452605_6453053_6453117_6453461
tx.6226	chr19	+	955	7	FSM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	-34	-2	-34	2	multi-exon	FALSE	canonical	3	49	junction_2	53.7297765572209	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	NA	False	NA	NA	NA	6458400	6465243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
tx.6227	chr19	+	697	5	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	4622	-2	4622	2	3prime_fragment	FALSE	canonical	3	149	junction_1	9.57535900110278	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	NA	False	NA	NA	NA	6463056	6465243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
tx.6228	chr19	+	569	3	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	5351	-2	5351	2	3prime_fragment	FALSE	canonical	3	164	junction_1	6	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	NA	False	NA	NA	NA	6463785	6465243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_6464072_6464821_6464885_6465023
tx.6229	chr19	-	1233	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	29	0	29	0	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	484	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	6887445	6884073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
tx.623	chr1	+	2341	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	5	486	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGAGTCACTTCGAGT	NA	False	NA	NA	False	NA	NA	NA	171954333	171963336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
tx.6230	chr19	+	1011	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	-26	0	23	0	multi-exon	TRUE	canonical	3	803	junction_1	23.6971634495683	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	9288	False	NA	NA	False	NA	NA	NA	6887088	6888396	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
tx.6231	chr19	+	1081	3	FSM	ENSMUSG00000038812.17	ENSMUST00000174786.2	646	3	-435	0	-18	0	multi-exon	FALSE	canonical	3	803	junction_1	28.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	9296	False	NA	NA	False	NA	NA	NA	6887096	6888396	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6887631_6887730_6887833_6887951
tx.6232	chr19	-	776	5	FSM	ENSMUSG00000050623.6	ENSMUST00000057716.6	784	5	6	2	6	-1	multi-exon	FALSE	canonical	3	36	junction_4	4.76969600708473	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCAGTGCGTGGCTGCTT	7396	False	NA	NA	False	NA	NA	NA	6902742	6899792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161_6902475_6902659
tx.6233	chr19	-	627	3	NIC	ENSMUSG00000050623.6	novel	784	5	NA	NA	6	0	intron_retention	TRUE	canonical	1	1	junction_1	17.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAGTCAGTGCGTGGC	7396	False	NA	NA	False	NA	NA	NA	6902742	6899797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_6900029_6902161_6902475_6902659
tx.6234	chr19	-	890	3	NNC	ENSMUSG00000024957.10	novel	600	2	NA	NA	275	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0.5	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGTGTTAAGTTAGTT	NA	False	NA	NA	False	NA	NA	NA	6911606	6906084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_6906560_6910070_6910337_6911457
tx.6235	chr19	-	920	3	NIC	ENSMUSG00000024957.10	novel	600	2	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	1.5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGTGTTAAGTTAGTT	9925	False	NA	NA	False	NA	NA	NA	6911894	6906084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_6906560_6910070_6910337_6911715
tx.6236	chr19	-	2118	7	FSM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	-273	13	13	0	multi-exon	FALSE	canonical	3	22	junction_3	2.47767812455308	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCTGTCACTCGTCT	6540	False	NA	NA	False	NA	NA	NA	6918834	6915437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
tx.6237	chr19	+	915	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	76	-1	13	1	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGCCTCTATCCTTCGT	9397	False	NA	NA	False	NA	NA	NA	6919944	6929262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
tx.6238	chr19	+	718	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	278	3	5	0	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACAGGCTTGGCTGGTCTT	1858	False	NA	NA	False	NA	NA	NA	6952613	6954689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
tx.6239	chr19	+	343	3	FSM	ENSMUSG00000056612.8	ENSMUST00000235195.2	552	3	139	70	139	1	multi-exon	FALSE	canonical	3	3100	junction_2	95	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTTATATTGACTCT	3200	False	NA	NA	False	NA	NA	NA	6953955	6954619	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6953996_6954225_6954259_6954349
tx.624	chr1	+	2732	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-2	24	-2	17	multi-exon	TRUE	canonical	3	418	junction_1	55.9704063816991	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGTCAGAAGTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	171975682	172023050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
tx.6240	chr19	-	627	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	42	-5	-19	2	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	6957827	6955106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
tx.6241	chr19	-	666	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	-22	-2	-22	2	multi-exon	FALSE	canonical	3	194	junction_5	200.859752065963	183	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	6957830	6955106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
tx.6242	chr19	-	1077	6	FSM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	-3	0	-3	0	multi-exon	TRUE	canonical	3	154	junction_3	27.3978101314685	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9273	False	NA	NA	False	NA	NA	NA	6969874	6965278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526
tx.6243	chr19	-	869	7	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_6	60.0194412947449	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9943	False	NA	NA	False	NA	NA	NA	6969942	6965278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526_6969641_6969916
tx.6244	chr19	-	872	7	NNC	ENSMUSG00000024963.13	novel	840	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	78.2788817838715	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9937	False	NA	NA	False	NA	NA	NA	6969948	6965278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526_6969641_6969916
tx.6245	chr19	-	1047	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	-47	0	33	0	multi-exon	FALSE	canonical	3	112	junction_2	17.04582060213	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	6998	False	NA	NA	False	NA	NA	NA	6973452	6970385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
tx.6246	chr19	+	1125	7	FSM	ENSMUSG00000047656.10	ENSMUST00000088223.7	1103	7	-23	1	18	1	multi-exon	FALSE	canonical	3	25	junction_3	9.59166304662544	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTGGTTCCTCATCC	NA	False	NA	NA	False	NA	NA	NA	6973516	6976413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
tx.6247	chr19	-	773	3	NNC	ENSMUSG00000024965.10	novel	2856	14	NA	NA	19369	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	9.5	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTCTTCCTCCTCTG	8108	False	NA	NA	False	NA	NA	NA	6977344	6976343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_6976889_6977006_6977149_6977258
tx.6248	chr19	-	986	6	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	13599	0	13599	0	3prime_fragment	FALSE	canonical	3	3229	junction_3	159.67767533378	106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	NA	False	NA	NA	False	NA	NA	NA	7003736	6998069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659
tx.6249	chr19	-	2109	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	-1	0	-1	0	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	888	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3762	False	NA	NA	False	NA	NA	NA	7017336	6998069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
tx.625	chr1	+	2869	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	7	-17	7	17	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGTCAGAAGTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	171975715	172023050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
tx.6250	chr19	-	1028	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	41	644	41	-636	multi-exon	TRUE	canonical	3	1089	junction_1	76.373351955305	443	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTGTGCGCTTCCCT	NA	False	NA	NA	False	NA	NA	NA	7183640	7176210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
tx.6251	chr19	-	499	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	45	6	-28	-6	multi-exon	FALSE	canonical	3	12296	junction_1	0	8235	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAATGCATCATGTCCTT	7411	False	NA	NA	False	NA	NA	NA	7194936	7192523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_7192850_7194763
tx.6252	chr19	-	3122	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	109	0	-18	0	multi-exon	TRUE	canonical	3	441	junction_1	30.7431757816732	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	NA	False	NA	NA	NA	7218439	7203037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
tx.6253	chr19	+	2346	13	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	300.802676184904	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	7244694	7252590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_7244790_7246215_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
tx.6254	chr19	+	2213	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	610	0	610	0	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	7246253	7252590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
tx.6255	chr19	+	1000	2	ISM	ENSMUSG00000024968.15	ENSMUST00000113369.3	2013	11	4369	-1	3181	0	3prime_fragment	FALSE	canonical	3	1016	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	7251497	7252590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_7251615_7251707
tx.6256	chr19	-	1402	6	ISM	ENSMUSG00000024969.16	ENSMUST00000025921.15	3018	18	12290	-22	21	-4	3prime_fragment	FALSE	canonical	0	0	junction_3	113.992280440388	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCCAGCGGCCACCTT	6918	False	NA	NA	False	NA	NA	NA	7260522	7254101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397
tx.6257	chr19	-	2719	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCAGCGGCCACCTTT	3866	False	NA	NA	False	NA	NA	NA	7319219	7254100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
tx.6258	chr19	-	2035	2	ISM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	53390	2	53390	-2	3prime_fragment	FALSE	canonical	3	635	junction_1	0	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATCAGTCTGCAACTTT	NA	False	NA	NA	False	NA	NA	NA	7407177	7403267	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_7405241_7407115
tx.6259	chr19	-	1748	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-50	1064	15	578	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	417	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGCTCCCAGCCATTGA	8989	False	NA	NA	False	NA	NA	NA	7460617	7404329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
tx.626	chr1	+	1443	4	ISM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	10	22026	10	-2812	5prime_fragment	FALSE	canonical	3	161	junction_1	203.332786884512	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACAAAGGAAGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	171975718	172001007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895
tx.6260	chr19	+	2009	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	-40	2399	0	1	multi-exon	TRUE	canonical	3	31	junction_6	6.18409698788397	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTGGAAGCAGTTCT	NA	False	NA	NA	False	NA	NA	NA	7471762	7511566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
tx.6261	chr19	+	1612	12	ISM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	15043	2399	14946	1	3prime_fragment	FALSE	canonical	3	31	junction_5	6.45646578347807	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTGGAAGCAGTTCT	NA	False	NA	NA	False	NA	NA	NA	7486845	7511566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
tx.6262	chr19	+	792	5	FSM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	-13	2744	-13	-910	multi-exon	TRUE	canonical	3	141	junction_1	31.8825971338597	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTAGCTACCTGGT	NA	False	NA	NA	False	NA	NA	NA	7534810	7563166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_7534930_7535296_7535361_7552301_7552405_7556318_7556588_7562929
tx.6263	chr19	+	1003	5	FSM	ENSMUSG00000060675.14	ENSMUST00000136756.2	1901	5	-14	912	-6	-912	multi-exon	FALSE	canonical	3	44	junction_1	71.8135606971274	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGCAGTAGCTACCTG	NA	False	NA	NA	False	NA	NA	NA	7534835	7563164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_7535168_7535296_7535361_7552301_7552405_7556318_7556588_7562929
tx.6264	chr19	-	1432	8	FSM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	-19	-20	-19	20	multi-exon	FALSE	canonical	3	2940	junction_7	103.964868477534	569	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	NA	False	NA	NA	False	NA	NA	NA	8690368	8684930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
tx.6265	chr19	-	1865	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	4	-50	4	20	multi-exon	FALSE	canonical	3	2610	junction_8	198.183902915953	848	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	NA	False	NA	NA	False	NA	NA	NA	8691239	8684930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
tx.6266	chr19	+	597	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	8	0	-4	0	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	NA	False	NA	NA	NA	8700846	8703807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
tx.6267	chr19	+	574	9	FSM	ENSMUSG00000108414.2	ENSMUST00000205909.2	709	9	135	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	124.260814418706	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	NA	False	NA	NA	NA	8701503	8703807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
tx.6268	chr19	+	1228	11	FSM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	-24	0	-12	0	multi-exon	FALSE	canonical	3	1012	junction_8	78.6635875103596	370	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGACCTTTTGTGATGG	951	False	NA	NA	False	NA	NA	NA	8713178	8717988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
tx.6269	chr19	+	1797	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	27	427	27	0	multi-exon	FALSE	canonical	3	140	junction_1	18.8417090519942	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6576	False	NA	NA	False	NA	NA	NA	8718803	8733006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
tx.627	chr1	+	2407	11	ISM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	24300	-2	-1512	2	3prime_fragment	FALSE	canonical	3	475	junction_7	40.6083735207408	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCAAGTTAAAATTATT	NA	False	NA	NA	False	NA	NA	NA	172000008	172023035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
tx.6270	chr19	+	2302	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	12	12	12	3	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	131	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8581	False	NA	NA	False	NA	NA	NA	8734448	8748274	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
tx.6271	chr19	+	750	2	FSM	ENSMUSG00000117924.2	ENSMUST00000010248.4	748	2	-1	-1	-1	1	multi-exon	FALSE	canonical	3	838	junction_1	0	199	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGTCCTCTCTCTCA	6518	False	NA	119	True	NA	NA	NA	8748358	8749840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8748680_8749411
tx.6272	chr19	-	839	5	FSM	ENSMUSG00000118346.2	ENSMUST00000010249.7	818	5	6	-27	6	0	multi-exon	FALSE	canonical	3	161	junction_4	40.2833712591188	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGGATTTCTTGATGT	5080	False	NA	27	True	NA	NA	NA	8751825	8749888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698
tx.6273	chr19	-	1749	2	ISM	ENSMUSG00000118346.2	ENSMUST00000237634.2	775	5	1	0	1	0	intron_retention	FALSE	canonical	3	253	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGGATTTCTTGATGT	5075	False	NA	22	True	NA	NA	NA	8751830	8749888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_8750199_8750391
tx.6274	chr19	-	2038	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	27	0	-8	0	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTGTCTATGCTCGTG	9928	False	NA	NA	False	NA	NA	NA	8763653	8751855	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
tx.6275	chr19	-	870	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	20	0	20	0	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	334	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	NA	False	NA	NA	NA	8775921	8770490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
tx.6276	chr19	+	1946	2	NNC	ENSMUSG00000071661.8	novel	2004	2	NA	NA	-86	10	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	5342	False	NA	NA	False	NA	NA	NA	8779832	8782220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_8779896_8780337
tx.6277	chr19	+	2070	2	FSM	ENSMUSG00000071661.8	ENSMUST00000172175.3	2004	2	-56	-10	-56	10	multi-exon	FALSE	canonical	3	20	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	5372	False	NA	NA	False	NA	NA	NA	8779862	8782220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8780050_8780337
tx.6278	chr19	-	2222	5	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	4	9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	101.019800039398	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAAATTTATTTCACT	1889	False	NA	NA	False	NA	NA	NA	8796693	8786429	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_8787707_8788998_8789203_8793217_8793401_8795799_8796049_8796384
tx.6279	chr19	-	2417	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	39	1053	0	1008	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTCAGCTGTCACT	1924	False	NA	NA	False	NA	NA	NA	8796658	8787491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
tx.628	chr1	-	2288	3	ISM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	6228	0	-761	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTCTAGAATCT	826	False	NA	NA	False	NA	NA	NA	172028143	172024294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_172026258_172026677_172026834_172027974
tx.6280	chr19	+	1902	12	FSM	ENSMUSG00000071657.13	ENSMUST00000171649.8	1962	12	44	16	44	0	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	NA	False	NA	NA	NA	8814874	8826031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
tx.6281	chr19	-	801	3	FSM	ENSMUSG00000071658.6	ENSMUST00000096259.6	1643	3	-35	877	-35	-877	multi-exon	TRUE	canonical	3	189	junction_2	8	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACGTCTGTGTTAGCG	4727	False	NA	NA	False	NA	NA	NA	8816593	8815173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_8815636_8815917_8816018_8816354
tx.6282	chr19	+	1630	11	FSM	ENSMUSG00000071657.13	ENSMUST00000160556.8	1795	11	166	-1	104	0	multi-exon	FALSE	canonical	0	0	junction_6	47.8256207487158	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	NA	False	NA	NA	NA	8816857	8826031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
tx.6283	chr19	+	1371	11	FSM	ENSMUSG00000071657.13	ENSMUST00000086058.13	1388	11	18	-1	2	0	multi-exon	FALSE	canonical	0	0	junction_6	60.1671837466239	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	NA	False	NA	NA	NA	8817900	8826031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8817933_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
tx.6284	chr19	+	1076	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	-35	-8	28	0	multi-exon	FALSE	canonical	3	339	junction_1	323.787653323045	265	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5877	False	NA	NA	False	NA	NA	NA	8848887	8853028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
tx.6285	chr19	+	1150	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	-58	199	-24	0	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	568	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5888	False	NA	NA	False	NA	NA	NA	8848898	8853028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
tx.6286	chr19	-	738	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	19	64	19	-64	multi-exon	FALSE	canonical	3	500	junction_1	0	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTTTTGTATGTCACA	NA	False	NA	NA	False	NA	NA	NA	8858268	8857441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_8857981_8858069
tx.6287	chr19	-	102	2	Genic_Genomic	ENSMUSG00000093314.3	novel	76	1	NA	NA	4	312	multi-exon	FALSE	canonical	3	548	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTGTGTTCGCTACCT	NA	False	NA	NA	False	NA	NA	NA	8866134	8865750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr19_-_8865832_8866113
tx.6288	chr19	+	619	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	47	140	1	0	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	641	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTGGGATGAAGTGCAG	NA	False	NA	NA	False	NA	NA	NA	8866263	8868105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
tx.6289	chr19	+	3260	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	10	4	10	-4	multi-exon	FALSE	canonical	3	204	junction_1	0	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAGTCCAGTGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	8870378	8875248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8870513_8872122
tx.629	chr1	-	2428	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	73	0	-34	0	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTCTAGAATCT	NA	False	NA	NA	False	NA	NA	NA	172034298	172024294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
tx.6290	chr19	+	1074	5	ISM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	-23	8808	7	472	intron_retention	FALSE	canonical	3	992	junction_1	88.0823478342852	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTCGCGCTCGGTAGC	1870	False	NA	NA	False	NA	NA	NA	8875441	8885228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578
tx.6291	chr19	+	3802	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	-17	3	-11	-3	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGATGTCTGAATTAT	1882	False	NA	NA	False	NA	NA	NA	8875453	8894033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
tx.6292	chr19	+	3864	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	-4	0	-4	0	multi-exon	FALSE	canonical	3	261	junction_6	273.686404967234	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1889	False	NA	NA	False	NA	NA	NA	8875460	8894036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
tx.6293	chr19	+	1475	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	128	0	18	0	multi-exon	FALSE	canonical	3	179	junction_3	18.060661671157	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4840	False	NA	NA	False	NA	NA	NA	8897865	8904600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
tx.6294	chr19	+	1318	5	FSM	ENSMUSG00000071649.7	ENSMUST00000237071.2	909	5	7	-416	7	-2	multi-exon	FALSE	canonical	3	30	junction_2	75.1644031440415	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGCTTCATGGTTTCCT	4829	False	NA	NA	False	NA	NA	NA	8897854	8904598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8898013_8899169_8899345_8903067_8903263_8903445_8903737_8904099
tx.6295	chr19	+	811	3	ISM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	148	1190	38	-772	5prime_fragment	FALSE	canonical	3	186	junction_2	3	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCCTCTCTGTTTCTTC	4860	False	NA	NA	False	NA	NA	NA	8897885	8903410	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_8898013_8899169_8899345_8902901
tx.6296	chr19	+	1256	5	NNC	ENSMUSG00000071649.7	novel	1603	5	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	83.3906469575575	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4883	False	NA	NA	False	NA	NA	NA	8897908	8904600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_8898013_8899169_8899345_8902901_8903087_8903445_8903737_8904099
tx.6297	chr19	+	1363	10	ISM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	7309	0	-1099	0	3prime_fragment	FALSE	canonical	3	44	junction_1	12.6031546119549	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	9565	False	NA	NA	False	NA	NA	NA	8914565	8918946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
tx.6298	chr19	+	959	6	ISM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	9134	0	508	0	3prime_fragment	FALSE	canonical	3	55	junction_2	13.2423562857975	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	621	False	NA	NA	False	NA	NA	NA	8916390	8918946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
tx.6299	chr19	+	3129	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	0	6	0	-6	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	143	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCAGGCTCAGCTATTC	3469	False	NA	NA	False	NA	NA	NA	8919238	8929661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
tx.63	chr1	-	3887	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	71	0	-30	0	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	33853537	33800625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
tx.630	chr1	-	1263	6	ISM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	19103	2320	-2483	514	3prime_fragment	FALSE	canonical	3	144	junction_3	13.6616250863505	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172106528	172101595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437
tx.6300	chr19	+	2756	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	-9	6	-9	-6	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATTTAATGTTCTTTT	1348	False	NA	NA	False	NA	NA	NA	8931201	8943568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
tx.6301	chr19	+	1427	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	140	297	140	-297	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	16776	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	983	False	NA	NA	False	NA	NA	NA	8944544	8955546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
tx.6302	chr19	+	1088	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	-37	-221	-26	21	multi-exon	FALSE	canonical	3	34	junction_5	17.6703140888893	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGCGTACTTA	NA	False	NA	NA	False	NA	NA	NA	8966621	9054299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
tx.6303	chr19	-	1705	5	ISM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	16304	2169	16199	-2169	3prime_fragment	FALSE	canonical	3	393	junction_3	13.7181449183189	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	NA	NA	NA	9096696	9089400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551
tx.6304	chr19	-	1778	6	ISM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	775	2169	670	-2169	3prime_fragment	FALSE	canonical	3	393	junction_3	33.0611554547024	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	NA	NA	NA	9112225	9089400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150
tx.6305	chr19	-	1999	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	27	2169	27	-2169	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	NA	NA	NA	9112973	9089400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
tx.6306	chr19	+	2548	2	NNC	ENSMUSG00000100141.2	novel	1112	2	NA	NA	-287	1073	intron_retention	TRUE	canonical	0	0	junction_1	0	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGGCCTATGATCCA	NA	False	NA	NA	False	NA	NA	NA	9584180	9586813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_9584927_9585011
tx.6307	chr19	-	1100	5	ISM	ENSMUSG00000024660.10	ENSMUST00000237439.2	2643	18	18641	-335	1820	0	3prime_fragment	FALSE	canonical	3	446	junction_4	34.9070193514141	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	-42	True	NA	NA	NA	9854183	9849705	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953
tx.6308	chr19	-	3128	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	62	46	0	0	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	NA	False	NA	NA	NA	9876853	9849705	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
tx.6309	chr19	+	590	2	FSM	ENSMUSG00000118100.2	ENSMUST00000235252.2	330	2	-257	-3	-12	3	multi-exon	FALSE	canonical	3	13	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGCTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	9877041	9878478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_9877385_9878231
tx.631	chr1	+	2277	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	-1	2	-1	-2	multi-exon	FALSE	canonical	3	675	junction_3	44.2329691017408	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCCTGTTGTGTCTTCTC	3742	False	NA	NA	False	NA	NA	NA	172139932	172147406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
tx.6310	chr19	+	706	3	FSM	ENSMUSG00000118100.2	ENSMUST00000235986.2	582	3	-12	-112	-12	8	multi-exon	FALSE	canonical	1	1	junction_2	6	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGTCTCTTCATAGCA	NA	False	NA	NA	False	NA	NA	NA	9877041	9880033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_9877385_9878231_9878442_9879880
tx.6311	chr19	+	869	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	55	5	-3	0	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	4733	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTCTTTGTGATTG	4924	False	NA	NA	False	NA	NA	NA	9960064	9962457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
tx.6312	chr19	+	2218	10	FSM	ENSMUSG00000024663.21	ENSMUST00000113161.10	5146	10	11	2917	10	-1	multi-exon	FALSE	canonical	3	20	junction_4	9.36897954837013	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCGGCAGTGGCCTTCA	3978	False	NA	NA	False	NA	NA	NA	9995567	10012824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
tx.6313	chr19	-	3222	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	-87	15	-87	-15	multi-exon	TRUE	canonical	3	359	junction_1	25.8738196920081	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTATTCTCACTTGC	9784	False	NA	NA	False	NA	NA	NA	10079197	10040143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
tx.6314	chr19	+	439	2	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTCTTGGTCATAATTA	NA	False	NA	NA	False	NA	NA	NA	10108135	10108914	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr19_+_10108471_10108810
tx.6315	chr19	+	3409	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	51	0	0	0	multi-exon	TRUE	canonical	3	652	junction_7	60.0436480355873	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	NA	False	NA	NA	NA	10160302	10174238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
tx.6316	chr19	-	2206	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	135	0	10	0	multi-exon	FALSE	canonical	3	832	junction_1	0	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2165	False	NA	NA	False	NA	NA	NA	10181297	10176501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10178462_10181051
tx.6317	chr19	-	2100	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	0	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2155	False	NA	NA	False	NA	NA	NA	10181307	10176501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10178462_10181167
tx.6318	chr19	+	404	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	196	6	-8	0	multi-exon	FALSE	canonical	3	2797	junction_1	495.826806679734	1265	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4173	False	NA	NA	False	NA	NA	NA	10181573	10185182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
tx.6319	chr19	-	1770	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	-66	-707	0	4	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTTGATCTACATCC	NA	False	NA	NA	False	NA	NA	NA	10502522	10479000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
tx.632	chr1	+	2441	6	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	-3	0	-3	0	intron_retention	FALSE	canonical	3	675	junction_3	48.3553513067582	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTGTGTCTTCTCTT	3740	False	NA	NA	False	NA	NA	NA	172139930	172147408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859
tx.6320	chr19	-	2039	5	FSM	ENSMUSG00000024668.9	ENSMUST00000235853.2	2025	5	-14	0	12	0	multi-exon	FALSE	canonical	2	8	junction_4	101.25802437338	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTGTTTGATCTAC	NA	False	NA	NA	False	NA	NA	NA	10502534	10479004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10498312_10498423_10502422
tx.6321	chr19	-	1948	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-74	1107	-7	0	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	141	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTGTTTGATCTAC	NA	False	NA	NA	False	NA	NA	NA	10502553	10479004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
tx.6322	chr19	+	3576	10	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-23	80	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	59.2792096047006	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGCATTGAATAGATT	NA	False	NA	NA	False	NA	NA	NA	10502606	10525097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
tx.6323	chr19	-	1019	5	FSM	ENSMUSG00000024667.13	ENSMUST00000154383.2	927	5	-5	-87	0	-2	multi-exon	FALSE	canonical	3	49	junction_4	15.1224171348366	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTGGTTGATTTTCTC	NA	False	NA	NA	False	NA	NA	NA	10533120	10527826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533076
tx.6324	chr19	-	901	6	FSM	ENSMUSG00000024667.13	ENSMUST00000236561.2	876	6	-20	-5	-20	-2	multi-exon	FALSE	canonical	3	14	junction_1	26.7686383665662	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTGGTTGATTTTCTC	NA	False	NA	NA	False	NA	NA	NA	10533140	10527826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10528184_10528321_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533076
tx.6325	chr19	-	1429	5	NIC	ENSMUSG00000024666.7	novel	1529	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	52.1464284491278	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1786	False	NA	NA	False	NA	NA	NA	10554450	10547841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554332
tx.6326	chr19	-	1357	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	233	0	-22	0	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1743	False	NA	NA	False	NA	NA	NA	10554493	10547841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
tx.6327	chr19	+	2682	9	FSM	ENSMUSG00000034445.9	ENSMUST00000237581.2	2634	9	-40	-8	0	1	multi-exon	FALSE	canonical	3	15	junction_1	28.8693176226942	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	NA	False	NA	NA	NA	10554814	10567194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_10554928_10555097_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
tx.6328	chr19	+	2851	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	282	-3	0	3	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTTTTGTTCAGACTG	NA	False	NA	NA	False	NA	NA	NA	10554817	10567196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
tx.6329	chr19	+	2771	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	-15	-1282	-9	1	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	NA	False	NA	NA	NA	10554802	10567194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
tx.633	chr1	+	1383	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	201	2	3	-2	multi-exon	FALSE	canonical	3	984	junction_4	118.904373342615	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTGTTTCTAGGG	NA	False	NA	NA	False	NA	NA	NA	172327814	172334945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
tx.6330	chr19	+	4221	27	FSM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	241	-3	-19	3	multi-exon	FALSE	canonical	3	2606	junction_4	266.254060724097	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	611	False	NA	NA	False	NA	NA	NA	10582931	10607186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
tx.6331	chr19	+	1788	9	ISM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	19415	-3	-305	3	3prime_fragment	FALSE	canonical	3	3022	junction_4	211.272927749866	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	10602105	10607186	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
tx.6332	chr19	+	2537	4	NIC	ENSMUSG00000048832.10	novel	2686	5	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	51.9893151415643	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGGTGTCCATGATG	NA	False	NA	NA	False	NA	NA	NA	10666089	10691988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_10666344_10683573_10683673_10688634_10688718_10689887
tx.6333	chr19	+	2701	5	FSM	ENSMUSG00000048832.10	ENSMUST00000087951.7	2686	5	-16	1	0	-1	multi-exon	TRUE	canonical	3	85	junction_1	17.2699160391705	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGGTGTCCATGATGA	NA	False	NA	NA	False	NA	NA	NA	10666098	10691989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689887
tx.6334	chr19	+	2600	5	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	46.3923485070545	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGGTGTCCATGATGA	NA	False	NA	NA	False	NA	NA	NA	10666116	10691989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_10666261_10683573_10683673_10687633_10687806_10688634_10688718_10689887
tx.6335	chr19	-	1933	4	FSM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	255	0	-15	0	multi-exon	TRUE	canonical	3	149	junction_2	8.28653526310404	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGCTGACAAACTCTC	NA	False	NA	NA	False	NA	NA	NA	10859110	10848023	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10859015
tx.6336	chr19	+	2122	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	12	0	12	0	multi-exon	FALSE	canonical	3	125	junction_6	13.7346277707115	258	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	10872606	10882896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
tx.6337	chr19	-	1690	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	-6	1319	-6	-1319	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTTCAGCTGTGAATT	NA	False	NA	NA	False	NA	NA	NA	10926636	10920163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
tx.6338	chr19	+	1018	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-13	157	-13	10	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	462	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTCTCTTTGGTCAGTT	148	False	NA	NA	False	NA	NA	NA	11747741	11752167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
tx.6339	chr19	-	1914	3	ISM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	35804	2	-234	-2	3prime_fragment	FALSE	canonical	3	487	junction_1	25	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGGGGCCATCTCTC	NA	False	NA	NA	False	NA	NA	NA	11760502	11754850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_11756538_11758930_11759045_11760389
tx.634	chr1	+	1825	12	FSM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	82	1	-10	-1	multi-exon	TRUE	canonical	3	18	junction_1	6.26415751889171	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACAGCTCCACTTCACTG	5504	False	NA	NA	False	NA	NA	NA	172348692	172373436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_172348749_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
tx.6340	chr19	-	1955	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	70	785	21	-785	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAAGGTAAGCAGCAG	7207	False	NA	NA	False	NA	NA	NA	11796236	11755633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
tx.6341	chr19	+	4056	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	39	121	-5	-121	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	NA	False	NA	NA	NA	11889801	11922334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
tx.6342	chr19	+	1811	3	ISM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	30301	121	30257	-121	3prime_fragment	FALSE	canonical	3	277	junction_1	2	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	6934	False	NA	NA	False	NA	NA	NA	11920063	11922334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_11920085_11920188_11920339_11920694
tx.6343	chr19	+	3277	4	FSM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	-9	-1	-9	1	multi-exon	FALSE	canonical	3	71	junction_1	5.90668171555645	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTCTTTAGTTATTT	NA	False	NA	NA	False	NA	NA	NA	12550877	12567127	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_12550945_12554453_12554535_12561286_12561487_12564198
tx.6344	chr19	-	2102	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	67	448	-62	1	multi-exon	TRUE	canonical	3	2829	junction_2	225.154079188008	2658	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGCCTGTGAATTATT	NA	False	NA	NA	False	NA	NA	NA	15902356	15882489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
tx.6345	chr19	-	2537	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	11	0	-5	0	multi-exon	FALSE	canonical	3	141	junction_1	15.9123876785558	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	186	False	NA	NA	False	NA	NA	NA	15962342	15933137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
tx.6346	chr19	-	1059	11	ISM	ENSMUSG00000046230.12	ENSMUST00000224428.2	2689	19	-22	11914	-1	-4959	5prime_fragment	FALSE	canonical	3	29	junction_4	6.00333240792145	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACATTTAGATTGACTT	NA	False	NA	NA	False	NA	NA	NA	16758298	16723302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
tx.6347	chr19	-	2115	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	18	2473	18	55	multi-exon	FALSE	canonical	3	31	junction_2	7	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATCCTTGTAAATAATTT	8052	False	NA	NA	False	NA	NA	NA	17334013	17305977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_17307853_17310473_17310621_17333920
tx.6348	chr19	-	2214	4	NNC	ENSMUSG00000038843.19	novel	4606	3	NA	NA	13	55	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	19.3964487013015	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATCCTTGTAAATAATTT	8047	False	NA	NA	False	NA	NA	NA	17334018	17305977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_17307853_17310473_17310621_17313610_17313705_17333920
tx.6349	chr19	+	2394	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	70	18	70	-18	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCTTCCCCTGTCAACC	1394	False	NA	NA	False	NA	NA	NA	17371476	17378695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
tx.635	chr1	+	2236	9	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	69696	334	-23	-326	3prime_fragment	FALSE	canonical	3	62	junction_1	21.7884000100971	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGATATCATTCTTC	NA	False	NA	NA	False	NA	NA	NA	173248140	173293272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
tx.6350	chr19	-	1267	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-25	1484	9	-3	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	703	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGTTTTTGTGCTATC	NA	False	NA	NA	False	NA	NA	NA	18609178	18558175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
tx.6351	chr19	+	2767	2	FSM	ENSMUSG00000037847.15	ENSMUST00000162446.2	1341	2	-12	-1414	0	1414	multi-exon	FALSE	canonical	3	97	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAGCATAAGCCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	18609313	18616077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_18609446_18613442
tx.6352	chr19	+	1464	6	NIC	ENSMUSG00000037847.15	novel	1940	9	NA	NA	0	-38	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.0904678759327	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAATAAAAGAGAAAGATG	NA	False	NA	NA	False	NA	NA	NA	18609313	18629520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_18609446_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
tx.6353	chr19	+	1980	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	0	-40	0	40	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCAGTTGTCATTATT	NA	False	NA	NA	False	NA	NA	NA	18609313	18629832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
tx.6354	chr19	+	1458	10	NNC	ENSMUSG00000037847.15	novel	1940	9	NA	NA	0	-165	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	32.8389260136259	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCATAGTAATGCCGCCA	NA	False	NA	NA	False	NA	NA	NA	18609313	18629126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18625715_18625900_18628599
tx.6355	chr19	+	1435	8	NIC	ENSMUSG00000024726.11	novel	1714	8	NA	NA	-96	131	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	433.244145714536	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACATTATCTCCCATG	NA	False	NA	NA	False	NA	NA	NA	18648596	18681717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_18648800_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
tx.6356	chr19	+	1419	8	FSM	ENSMUSG00000024726.11	ENSMUST00000235736.2	1714	8	426	-131	-24	131	multi-exon	FALSE	canonical	1	1	junction_1	444.181981459245	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACATTATCTCCCATG	NA	False	NA	NA	False	NA	NA	NA	18648668	18681717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_18648856_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
tx.6357	chr19	-	1402	13	FSM	ENSMUSG00000024659.16	ENSMUST00000025561.8	1674	13	272	0	1	0	multi-exon	FALSE	canonical	3	18	junction_4	3.1446603773522	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCATTGTCTCTC	7277	False	NA	NA	False	NA	NA	NA	20368036	20350791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
tx.6358	chr19	+	2108	5	ISM	ENSMUSG00000024750.12	ENSMUST00000025659.12	2467	6	3179	263	385	-263	3prime_fragment	FALSE	canonical	3	378	junction_4	0.707106781186548	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTTGTTTATTGGGTT	NA	False	NA	NA	False	NA	NA	NA	21253788	21259391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
tx.6359	chr19	+	1644	2	Fusion	ENSMUSG00000044387.6_ENSMUSG00000033863.3	novel	414	2	NA	NA	-80	720	multi-exon	FALSE	canonical	3	42	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCCCCTGTAAGTAGTA	NA	False	NA	NA	False	NA	NA	NA	23112183	23143555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr19_+_23112319_23142046
tx.636	chr1	+	2096	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-21	-324	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	29.5379382475888	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATATCATTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	173248142	173293274	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
tx.6360	chr19	+	468	2	FSM	ENSMUSG00000044387.6	ENSMUST00000142712.2	414	2	-43	-11	-43	11	multi-exon	FALSE	canonical	3	58	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGCTAGAGTTACGAAAC	NA	False	NA	NA	False	NA	NA	NA	23112220	23113092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_23112319_23112722
tx.6361	chr19	+	499	2	NNC	ENSMUSG00000044387.6	novel	414	2	NA	NA	12	11	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGCTAGAGTTACGAAAC	NA	False	NA	NA	False	NA	NA	NA	23112275	23113092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_23112405_23112722
tx.6362	chr19	+	2409	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	428	1649	428	1014	multi-exon	FALSE	canonical	3	482	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAACAACAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	23119017	23143849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_23119624_23142046
tx.6363	chr19	-	4732	19	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	6350	-2	combination_of_known_junctions	FALSE	canonical	2	93	junction_7	108.932700936557	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTATTTAAGATGAGAG	NA	False	NA	NA	False	NA	NA	NA	23234880	23183816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851
tx.6364	chr19	-	2415	18	ISM	ENSMUSG00000024943.10	ENSMUST00000226111.2	3265	24	15083	-10	6350	-2	3prime_fragment	FALSE	canonical	2	185	junction_5	80.0723721085276	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTTATTTTTGGAAAC	NA	False	NA	NA	False	NA	NA	NA	23234880	23186088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851
tx.6365	chr19	+	841	2	Genic_Genomic	ENSMUSG00000051255.7	novel	633	1	NA	NA	-17	260	multi-exon	FALSE	canonical	3	409	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAACAGCGGAT	NA	False	NA	NA	False	NA	NA	NA	23653194	23654104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr19_+_23653644_23653712
tx.6366	chr19	+	1436	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	-3	11141	-3	329	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTATTTATTTTGT	NA	False	NA	NA	False	NA	NA	NA	23664789	23697891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
tx.6367	chr19	+	1633	8	NIC	ENSMUSG00000074925.5	novel	12574	7	NA	NA	0	126	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	7.20544012166771	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAAATGCCATTTTTAG	NA	False	NA	NA	False	NA	NA	NA	23664792	23698502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421_23697719_23698129
tx.6368	chr19	-	797	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	14	303	14	106	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	92	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCCCGGACCTGGCT	NA	False	NA	NA	False	NA	NA	NA	24257955	24239119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
tx.6369	chr19	-	1422	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	0	507	0	-507	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGAGGTTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	24938965	24897786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
tx.6370	chr19	+	1418	2	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCATGGTCTTGA	3738	False	NA	NA	False	NA	NA	NA	25186141	25191044	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr19_+_25186671_25190155
tx.6371	chr19	+	2321	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	19	0	19	0	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	NA	False	NA	NA	NA	25483000	25581693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
tx.6372	chr19	-	1826	3	FSM	ENSMUSG00000118001.2	ENSMUST00000237584.2	503	3	-35	-1288	-35	1288	multi-exon	TRUE	canonical	1	1	junction_2	2.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTGCCCAAAAAGCTTC	NA	False	NA	NA	False	NA	NA	NA	26461885	26459668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_26461343_26461656_26461733_26461809
tx.6373	chr19	-	2148	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-32	1355	-32	8	multi-exon	TRUE	canonical	3	1256	junction_17	93.320929312512	493	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGTTTAATGTCAACT	NA	False	NA	NA	False	NA	NA	NA	27407257	27367452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
tx.6374	chr19	+	2447	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	33	1320	-28	2	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGCTTCCCTTGTACTTG	NA	False	NA	NA	False	NA	NA	NA	28812506	28890040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
tx.6375	chr19	+	2646	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-133	2666	0	979	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGTGCTCACTGGCT	3836	False	NA	NA	False	NA	NA	NA	28967766	28994971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
tx.6376	chr19	+	2007	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	31	2041	2	-1406	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTGTCATTTGCATTA	3852	False	NA	NA	False	NA	NA	NA	28967782	28991130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
tx.6377	chr19	+	2331	6	ISM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	4553	2666	-4264	979	3prime_fragment	FALSE	canonical	3	145	junction_5	23.5677746085624	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGTGCTCACTGGCT	8522	False	NA	NA	False	NA	NA	NA	28972452	28994971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
tx.6378	chr19	-	2768	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	42	-1	42	1	multi-exon	FALSE	canonical	3	26	junction_1	7.58287544405155	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTGTCTCCATGTTG	NA	False	NA	NA	False	NA	NA	NA	29025319	28998231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
tx.6379	chr19	+	1779	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	32	-8	32	8	multi-exon	TRUE	canonical	3	369	junction_1	16.9958634673264	483	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGTGTAAATCAGAGTA	NA	False	NA	NA	False	NA	NA	NA	29078806	29121251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
tx.638	chr1	-	1603	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	29	1004	29	0	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTTTTAAAATTTAATT	821	False	NA	NA	False	NA	NA	NA	175453172	175428943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
tx.6380	chr19	-	718	2	FSM	ENSMUSG00000050957.5	ENSMUST00000052380.5	708	2	-10	0	-10	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGCTTATATGTTCTT	NA	False	NA	NA	False	NA	NA	NA	29302766	29298743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_29299140_29302444
tx.6381	chr19	-	775	5	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	7	-10	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	17.2825779327044	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATTTGACCCCAATGTC	NA	False	NA	NA	False	NA	NA	NA	29339266	29326008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29338216_29338328_29339196
tx.6382	chr19	-	849	6	FSM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	94	77	-3	1	multi-exon	FALSE	canonical	3	35	junction_3	10.1390334845093	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAATTTCTCGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	29339276	29326075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29339196
tx.6383	chr19	-	5055	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	16	1987	-9	1	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTGGAAAAAATGGATCT	NA	False	NA	NA	False	NA	NA	NA	29625799	29587600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
tx.6384	chr19	+	720	4	NNC	ENSMUSG00000024806.5	novel	906	5	NA	NA	5831	20	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	19.7709101684492	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTCTGGGCAGTAAT	NA	False	NA	NA	False	NA	NA	NA	29681164	29685846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_29681401_29682019_29682117_29684207_29684322_29685573
tx.6385	chr19	+	468	3	ISM	ENSMUSG00000024806.5	ENSMUST00000235954.2	739	5	6702	-20	6702	20	3prime_fragment	FALSE	canonical	3	41	junction_1	3.5	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTCTGGGCAGTAAT	NA	False	NA	NA	False	NA	NA	NA	29682035	29685846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_29682117_29684207_29684322_29685573
tx.6386	chr19	+	2082	10	ISM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	47530	-4	-461	4	3prime_fragment	FALSE	canonical	3	219	junction_3	25.0145636592312	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	NA	False	NA	NA	False	NA	NA	NA	30055442	30071126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
tx.6387	chr19	+	718	3	NNC	ENSMUSG00000024863.7	novel	1089	6	NA	NA	5086	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0.5	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGACTCTTGTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	30215427	30217082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_30215545_30215786_30215856_30216550
tx.6388	chr19	-	1947	2	ISM	ENSMUSG00000040451.19	ENSMUST00000134415.2	1595	6	34849	-1420	34849	0	3prime_fragment	FALSE	canonical	3	193	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTATTATATTGTGTT	5402	False	NA	NA	False	NA	NA	NA	32102774	32100126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_32101925_32102625
tx.6389	chr19	-	3242	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	18	2	18	0	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	8037	False	NA	NA	False	NA	NA	NA	32188395	32100129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
tx.639	chr1	+	2844	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	213	4739	0	6	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATTGGACAAATCTTC	9766	False	NA	NA	False	NA	NA	NA	175708359	175736316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
tx.6390	chr19	+	2410	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	193	10	39	-10	multi-exon	FALSE	canonical	3	240	junction_4	28.9687331445474	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAAGTCATCTCTGCAC	NA	False	NA	NA	False	NA	NA	NA	32463361	32492754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
tx.6391	chr19	-	2859	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	-8	920	-8	264	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCACTGAATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	32689739	32649957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
tx.6392	chr19	+	527	3	ISM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	58030	6073	4302	2110	3prime_fragment	FALSE	canonical	3	145	junction_1	4	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGACCTTTTTTTTT	720	False	NA	NA	False	NA	NA	NA	32792926	32797487	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_32792984_32795235_32795461_32797242
tx.6393	chr19	-	1623	7	FSM	ENSMUSG00000071573.15	ENSMUST00000096114.13	1597	7	-23	-3	7	3	multi-exon	FALSE	canonical	2	11	junction_4	3.8151743807532	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTTTTATAGCCTCACA	NA	False	NA	NA	False	NA	NA	NA	33369688	33115143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_33115675_33145721_33145898_33179874_33180049_33359766_33359926_33367316_33367460_33368479_33368586_33369354
tx.6394	chr19	-	2753	11	FSM	ENSMUSG00000024766.16	ENSMUST00000112508.9	2839	11	83	3	83	0	multi-exon	FALSE	canonical	3	39	junction_5	12.3109707172099	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTTCTGTTTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	33567625	33532562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
tx.6395	chr19	-	2971	10	FSM	ENSMUSG00000024781.17	ENSMUST00000049572.15	2969	10	0	-2	0	2	multi-exon	FALSE	canonical	3	30	junction_9	6.37704215656966	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGGTGTGGTGTTTGCTT	5915	False	NA	NA	False	NA	NA	NA	34504874	34469715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502247_34504765
tx.6396	chr19	+	1153	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-17	9	-2	-9	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	418	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTACATATGGATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	36061113	36082168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
tx.6397	chr19	+	1104	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	297.230701644362	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATATGGATTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	36061115	36082170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077640_36078208_36078239_36078633_36078672_36079220_36079301_36081735
tx.6398	chr19	+	791	3	NNC	ENSMUSG00000118032.2	novel	602	2	NA	NA	-16300	59	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGACTCTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	36212826	36233795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_36212985_36219029_36219176_36233308
tx.6399	chr19	+	1634	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	18	-26	18	14	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTGTACAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	36387165	36433618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
tx.64	chr1	-	1405	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	300	0	300	0	multi-exon	FALSE	canonical	3	256	junction_1	5.33853912601566	122	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTCTCATTTTATTTT	7504	False	NA	NA	False	NA	NA	NA	34478453	34475750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
tx.640	chr1	+	3004	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-6	6	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	73.1663257550206	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATTGGACAAATCTTC	9760	False	NA	NA	False	NA	NA	NA	175708353	175736316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
tx.6400	chr19	+	1540	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	35	-9	35	-3	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAATGCCAGCTTATTC	NA	False	NA	NA	False	NA	NA	NA	36387182	36433601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
tx.6401	chr19	+	2673	5	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	51253	587	4912	-587	3prime_fragment	FALSE	canonical	3	888	junction_3	109.879479430875	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGTAATTCATTGAAATT	NA	False	NA	NA	False	NA	NA	NA	36862884	36870290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
tx.6402	chr19	+	1488	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	167	154	134	20	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGCATTGAAGTGATTA	NA	False	NA	NA	False	NA	NA	NA	37185108	37199396	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
tx.6403	chr19	+	1261	5	ISM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	3296	18	3263	-18	3prime_fragment	FALSE	canonical	3	653	junction_2	54.554445281755	235	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGACATCTCATAGTTCA	NA	False	NA	NA	False	NA	NA	NA	37188237	37199532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
tx.6404	chr19	-	483	5	ISM	ENSMUSG00000056999.17	ENSMUST00000154339.8	2001	15	29628	152	13114	-152	3prime_fragment	FALSE	canonical	3	876	junction_3	22.4874965258474	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTAGAATATTTTTAA	8923	False	NA	NA	False	NA	NA	NA	37255163	37247980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139
tx.6405	chr19	-	3268	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-48	1839	-48	-152	multi-exon	TRUE	canonical	3	707	junction_13	63.1947496940125	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTAGAATATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	37340058	37247980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
tx.6406	chr19	+	2226	16	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-21	12118	-21	3970	5prime_fragment	TRUE	canonical	3	286	junction_7	24.0684209886916	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATAGACAGTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	37364829	37398189	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173
tx.6407	chr19	+	4839	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-20	0	-20	0	multi-exon	FALSE	canonical	3	280	junction_17	34.0452546631592	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	NA	False	NA	NA	NA	37364830	37410307	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
tx.6408	chr19	+	1771	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	31	0	31	0	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGCACGCGTGT	NA	False	NA	NA	False	NA	NA	NA	37423288	37429179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
tx.6409	chr19	+	2529	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	84.0640555296898	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	38043458	38062870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
tx.641	chr1	+	2561	18	FSM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	215	0	215	0	multi-exon	FALSE	canonical	1	6	junction_6	3.6941925807312	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTGTTCCGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	176642440	176848003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
tx.6410	chr19	+	2441	10	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	90.951078967938	19	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAGTATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	38043458	38062872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_38043530_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
tx.6411	chr19	+	2555	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	96	junction_2	88.367917758024	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAGTATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	38043458	38062872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_38043530_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
tx.6412	chr19	+	973	3	FSM	ENSMUSG00000054200.8	ENSMUST00000067098.8	1401	3	428	0	428	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATCTCTATCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	38085946	38102711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_38086142_38095829_38095959_38102062
tx.6413	chr19	-	1406	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	0	-4	0	4	multi-exon	TRUE	canonical	3	295	junction_2	36.3583414649629	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGAGTCTTTCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	38212586	38176924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
tx.6414	chr19	-	972	9	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	-13	16058	5	4	5prime_fragment	FALSE	canonical	3	315	junction_8	31.196954979613	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTAGCATTATGGAAGC	NA	False	NA	NA	False	NA	NA	NA	38212599	38192986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
tx.6415	chr19	+	360	3	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	6	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACAGCTGTAGATTTTG	NA	False	NA	NA	False	NA	NA	NA	38337120	38338203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr19_+_38337292_38337531_38337604_38338086
tx.6416	chr19	-	2041	2	Fusion	ENSMUSG00000117920.2_ENSMUSG00000118335.2	novel	596	2	NA	NA	-1957	-549	intron_retention	FALSE	canonical	3	9	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCCATTATTGGAG	NA	False	NA	NA	False	NA	NA	NA	38378508	38373562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr19_-_38375486_38378390
tx.6417	chr19	+	3188	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	286	0	225	0	multi-exon	FALSE	canonical	3	381	junction_1	3	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	NA	False	NA	NA	NA	38384713	38394058	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_38384750_38388881_38389063_38391087
tx.6418	chr19	-	2957	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	17	1003	17	-1003	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCATGGTTTTTTTTTTT	2305	False	NA	NA	False	NA	NA	NA	38807664	38777574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
tx.6419	chr19	+	3054	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	40	2774	40	-2774	multi-exon	TRUE	canonical	3	1554	junction_5	143.18806117019	324	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	NA	False	NA	NA	NA	38919398	38956721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
tx.642	chr1	-	2009	9	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	19657	214	-8253	0	3prime_fragment	FALSE	canonical	3	1001	junction_4	77.0218110342778	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	177604420	177590741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378
tx.6420	chr19	+	2302	15	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	12990	2771	216	-2771	3prime_fragment	FALSE	canonical	3	1637	junction_4	114.586501502274	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	954	False	NA	NA	False	NA	NA	NA	38932348	38956724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
tx.6421	chr19	-	1434	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	71	1066	71	124	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	333	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACCTCTTAGTTGAC	NA	False	NA	NA	False	NA	NA	NA	40259989	40210682	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
tx.6422	chr19	-	2619	23	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	20.7997139204739	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCCAGTCTTTACCC	9857	False	NA	NA	False	NA	NA	NA	40502226	40283198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
tx.6423	chr19	-	3448	19	FSM	ENSMUSG00000025007.14	ENSMUST00000025979.13	3527	19	79	0	0	0	multi-exon	FALSE	canonical	3	945	junction_12	98.5252364738204	69	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	40576828	40538700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
tx.6424	chr19	-	2738	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	5	0	5	0	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGACTTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	40600672	40584889	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
tx.6425	chr19	-	614	3	NNC	ENSMUSG00000061132.14	novel	1701	17	NA	NA	58654	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	6.5	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGATGCATTTTCAG	NA	False	NA	NA	False	NA	NA	NA	40923937	40917370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_40917737_40922870_40923027_40923845
tx.6426	chr19	-	1506	3	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	46552	0	46552	0	3prime_fragment	FALSE	canonical	3	1245	junction_2	18	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	8680	False	NA	NA	False	NA	NA	NA	41205867	41202230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_41203579_41205539_41205617_41205786
tx.6427	chr19	+	627	5	ISM	ENSMUSG00000025019.18	ENSMUST00000067795.13	4833	8	9	16118	9	-13025	5prime_fragment	FALSE	canonical	3	83	junction_3	9.51314879522022	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGTCCTCTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	41471084	41534582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313
tx.6428	chr19	+	2429	7	ISM	ENSMUSG00000025019.18	ENSMUST00000067795.13	4833	8	19	4994	19	-1901	5prime_fragment	FALSE	canonical	3	31	junction_6	24.3909136086918	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAAAAAAAAGGACAG	NA	False	NA	NA	False	NA	NA	NA	41471094	41545706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046
tx.6429	chr19	-	5111	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	-8	0	-8	0	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4519	False	NA	NA	False	NA	NA	NA	41790494	41755026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
tx.643	chr1	-	2544	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	13	214	3	0	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	177624064	177590741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
tx.6430	chr19	-	599	4	ISM	ENSMUSG00000025154.16	ENSMUST00000177495.2	1652	12	-17	16615	-17	-16615	5prime_fragment	FALSE	canonical	3	356	junction_2	45.8475735453906	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCCCCTGCTGACCCAT	4510	False	NA	NA	False	NA	NA	NA	41790503	41775047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_41775207_41776744_41776826_41780185_41780452_41790410
tx.6431	chr19	+	1775	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	3	-3	3	3	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	1799	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTTTGTCTTGTGTCTG	4063	False	NA	NA	False	NA	NA	NA	41900364	41907102	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
tx.6432	chr19	-	1059	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-11	-30	-9	30	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATATAGTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	41921746	41911974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
tx.6433	chr19	+	1874	12	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	79	junction_8	134.380796050282	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTAGCTTCTCTGTGCCT	4132	False	NA	NA	False	NA	NA	NA	41921921	41932541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
tx.6434	chr19	+	1824	11	FSM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	-5	2	-5	-2	multi-exon	FALSE	canonical	3	323	junction_7	37.0513157661101	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTAGCTTCTCTGTGCCT	4134	False	NA	NA	False	NA	NA	NA	41921923	41932541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
tx.6435	chr19	-	3473	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	137	junction_15	29.8713723971445	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	NA	False	NA	NA	NA	41969580	41932639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
tx.6436	chr19	-	3476	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	16	3115	-2	4	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	NA	False	NA	NA	NA	41969580	41932639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
tx.6437	chr19	+	1748	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	-212	-7	-212	7	multi-exon	FALSE	canonical	3	94	junction_1	5.5	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGACTTCCTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	41969989	42023089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_41970448_42020327_42020556_42022027
tx.6438	chr19	+	1952	7	FSM	ENSMUSG00000025176.15	ENSMUST00000081714.5	1668	7	-263	-21	-41	21	multi-exon	FALSE	canonical	1	1	junction_4	1.5723301886761	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAATGTCACGGAATAT	NA	False	NA	NA	False	NA	NA	NA	42034007	42059413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_42034550_42048326_42048456_42048605_42048734_42049366_42049502_42049741_42049839_42051630_42051765_42058626
tx.6439	chr19	-	1892	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	36.2745089560148	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4146	False	NA	NA	False	NA	NA	NA	42074790	42063380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067117_42067216_42074635
tx.6440	chr19	-	1915	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_4	34.0258725090188	21	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4140	False	NA	NA	False	NA	NA	NA	42074796	42063380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067100_42067216_42074635
tx.6441	chr19	-	1804	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	-4	0	-4	0	multi-exon	FALSE	canonical	2	63	junction_4	19.0574788468989	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4136	False	NA	NA	False	NA	NA	NA	42074800	42063380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
tx.6442	chr19	-	1031	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	13	0	13	0	multi-exon	FALSE	canonical	3	851	junction_1	12	344	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCAGAGTGTGCTAC	NA	False	NA	NA	False	NA	NA	NA	42117485	42111711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_42112288_42113186_42113466_42117309
tx.6443	chr19	+	2579	12	FSM	ENSMUSG00000018820.14	ENSMUST00000099443.11	2573	12	-5	-1	-5	1	multi-exon	FALSE	canonical	3	55	junction_1	33.3877792261314	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	NA	False	NA	NA	NA	42159027	42180157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
tx.6444	chr19	+	2696	12	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	17.7223769463382	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	NA	False	NA	NA	NA	42159027	42180157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
tx.6445	chr19	-	1249	10	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-19186	16	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	18.8325958557674	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATATCTCTCCTGCTGCCT	2505	False	NA	NA	False	NA	NA	NA	42295579	42271954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42295464
tx.6446	chr19	-	2756	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	0	91	0	0	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	42768417	42743634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
tx.6447	chr19	-	808	6	ISM	ENSMUSG00000025188.16	ENSMUST00000069298.13	3196	18	11	11403	5	-2673	5prime_fragment	FALSE	canonical	3	80	junction_5	24.5715282390005	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATTGTCCTGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	42768393	42757922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
tx.6448	chr19	-	1991	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	67	0	-53	0	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	468	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	8384	False	NA	NA	False	NA	NA	NA	43512977	43488190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
tx.6449	chr19	-	2913	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	19	1866	19	-1866	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTCAGCTAACCCAG	NA	False	NA	NA	False	NA	NA	NA	43741420	43723558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
tx.645	chr1	-	1044	3	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	7501	4225	24	3298	3prime_fragment	FALSE	canonical	3	6129	junction_2	38.5	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	NA	False	NA	NA	NA	178157861	178156132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_178156973_178157432_178157505_178157729
tx.6450	chr19	+	1252	9	FSM	ENSMUSG00000025193.15	ENSMUST00000026199.14	1298	9	53	-7	-49	0	multi-exon	FALSE	canonical	3	9	junction_5	8.4400459121974	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTCTCAGGTTCTTTC	9225	False	NA	NA	False	NA	NA	NA	43741487	43757077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751341_43751446_43753398_43753427_43755639_43755746_43756613
tx.6451	chr19	+	1300	9	FSM	ENSMUSG00000025193.15	ENSMUST00000112047.10	1233	9	-67	0	35	0	multi-exon	FALSE	canonical	3	18	junction_1	5.45435605731786	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTCTCAGGTTCTTTC	9207	False	NA	NA	False	NA	NA	NA	43741469	43757077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751311_43751446_43753398_43753427_43755639_43755746_43756613
tx.6452	chr19	-	1467	9	FSM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	361	0	361	0	multi-exon	FALSE	canonical	3	15	junction_8	10.3191266587827	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCCACTTGCATGCCT	6223	False	NA	NA	False	NA	NA	NA	43974634	43944745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241_43969439_43974504
tx.6453	chr19	-	3227	12	FSM	ENSMUSG00000025198.17	ENSMUST00000071698.13	3228	12	0	1	0	-1	multi-exon	TRUE	canonical	3	64	junction_11	39.5783562189201	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTGTGTTCTATTTT	NA	False	NA	NA	False	NA	NA	NA	44058214	44023383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058027
tx.6454	chr19	-	3123	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	11	2	1	-2	multi-exon	FALSE	canonical	3	111	junction_11	27.8217466521579	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTGTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	44058213	44023384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
tx.6455	chr19	-	2181	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	18	1382	3	2	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCTTATGTTGCTTA	NA	False	NA	NA	False	NA	NA	NA	44124297	44098457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
tx.6456	chr19	-	889	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	9	-13	6	0	multi-exon	FALSE	canonical	3	1199	junction_4	51.0165414351071	398	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	972	False	NA	NA	False	NA	NA	NA	44134876	44127684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
tx.6457	chr19	+	900	3	FSM	ENSMUSG00000025202.9	ENSMUST00000237324.2	655	3	-238	-7	-238	7	multi-exon	FALSE	canonical	3	31	junction_1	4	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTCCTGTTCTTAGT	NA	False	NA	NA	False	NA	NA	NA	44226015	44230464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_44226317_44226814_44227048_44230098
tx.6458	chr19	+	5053	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	402	0	0	0	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1469	False	NA	NA	False	NA	NA	NA	44282514	44295303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
tx.6459	chr19	-	1576	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	-15	3271	-15	267	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGCCACAAGACATTATA	7425	False	NA	NA	False	NA	NA	NA	44396163	44386164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
tx.646	chr1	-	2551	13	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	1658	4225	266	3298	3prime_fragment	FALSE	canonical	2	3444	junction_4	895.464819552145	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-1	True	NA	NA	NA	178163704	178156132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611
tx.6460	chr19	-	449	4	NNC	ENSMUSG00000091471.2	novel	225	2	NA	NA	6965	3686	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.96655480858378	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTGTGGTTATGGTGT	NA	False	NA	NA	False	NA	NA	NA	44534305	44528474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_44528609_44531704_44531829_44532139_44532252_44534226
tx.6461	chr19	-	655	5	FSM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	14	11	0	2	multi-exon	FALSE	canonical	3	4404	junction_1	502.944517317765	2493	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGGTTTCTGTGTCT	1988	False	NA	NA	False	NA	NA	NA	44543865	44538689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543755
tx.6462	chr19	+	1847	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	-2	4349	-2	-4349	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCCTGTCCCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	44551286	44560364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
tx.6463	chr19	-	1398	2	FSM	ENSMUSG00000025208.10	ENSMUST00000235259.2	515	2	-10	-873	-10	-110	multi-exon	FALSE	canonical	3	515	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGTGTTTAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	44994869	44993377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_44994609_44994702
tx.6464	chr19	-	1285	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	0	113	0	-113	multi-exon	FALSE	canonical	3	460	junction_1	27.5	353	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCAGTGTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44994881	44993380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_44994380_44994501_44994609_44994702
tx.6465	chr19	+	3548	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	-62	2	-62	-2	multi-exon	FALSE	canonical	3	97	junction_1	30.3593066455741	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGCGTTTTTTCT	2491	False	NA	NA	False	NA	NA	NA	44994934	45001199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
tx.6466	chr19	+	2891	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	-23	-1	-23	0	multi-exon	TRUE	canonical	3	75	junction_2	13.7767920794356	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATCTTCAGTTATTCCA	NA	False	NA	NA	False	NA	NA	NA	45036089	45044822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
tx.6467	chr19	+	2151	14	FSM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	-82	-5	0	1	multi-exon	FALSE	canonical	3	132	junction_1	132.758623339525	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTCTCTTGCTTTGCCG	NA	False	NA	NA	False	NA	NA	NA	45352189	45517733	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
tx.6468	chr19	+	2196	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	163.999393353781	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	NA	False	NA	NA	NA	45352189	45517736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
tx.6469	chr19	+	2262	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	0	716	0	4	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	NA	False	NA	NA	NA	45352189	45517736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
tx.647	chr1	-	3340	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	75	4225	6	3298	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	NA	False	NA	NA	NA	178165287	178156132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
tx.6470	chr19	+	752	5	ISM	ENSMUSG00000025217.16	ENSMUST00000224478.2	2194	14	71582	-4	71582	4	3prime_fragment	FALSE	canonical	3	590	junction_4	37.3120288914983	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	NA	False	NA	NA	NA	45505528	45517736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
tx.6471	chr19	-	2302	9	FSM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	22	0	22	0	multi-exon	FALSE	canonical	3	33	junction_8	11.9973955507018	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGCTGTCTGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	45548948	45540713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
tx.6472	chr19	+	826	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	-3	530	-3	214	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	206	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGACTGCCCCTTTCTC	3689	False	NA	NA	False	NA	NA	NA	45549050	45566196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
tx.6473	chr19	-	882	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	6	0	6	0	multi-exon	FALSE	canonical	3	216	junction_3	39.9229257444892	492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGCTTTTTCAA	4893	False	NA	NA	False	NA	NA	NA	45738024	45736172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
tx.6474	chr19	-	3236	8	ISM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	15749	0	4084	0	3prime_fragment	FALSE	canonical	3	653	junction_7	102.460345739118	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	NA	False	NA	44	True	NA	NA	NA	45756241	45738697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832
tx.6475	chr19	-	3449	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	33	1575	33	-4	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATCCAGTGTGGTTGCA	5509	False	NA	NA	False	NA	NA	NA	45771957	45740272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
tx.6476	chr19	-	2001	9	ISM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	19	17345	19	239	5prime_fragment	FALSE	canonical	3	667	junction_8	64.544074088951	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGGAGCAGTTTGTGCC	5495	False	NA	NA	False	NA	NA	NA	45771971	45756042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
tx.6477	chr19	-	1884	7	ISM	ENSMUSG00000025221.17	ENSMUST00000239049.2	2113	8	7897	3	27	-3	3prime_fragment	TRUE	canonical	3	16	junction_1	4.2687494916219	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	45784116	45780787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018
tx.6478	chr19	-	3742	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-66	0	-66	0	multi-exon	FALSE	canonical	3	159	junction_20	17.3221707646588	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6581	False	NA	NA	False	NA	NA	NA	45986993	45805802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
tx.6479	chr19	-	828	2	ISM	ENSMUSG00000025223.16	ENSMUST00000056931.14	2295	11	5511	-1	768	0	3prime_fragment	FALSE	canonical	3	350	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	9023	False	NA	NA	False	NA	NA	NA	46022549	46021031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_46021781_46022470
tx.648	chr1	+	783	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-80	2877	-62	165	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGGAAGGACAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	178233587	178309201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
tx.6480	chr19	+	2656	10	ISM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	7928	107	-3367	3	3prime_fragment	FALSE	canonical	3	236	junction_3	88.0661928380446	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	NA	False	NA	NA	NA	46052905	46061243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
tx.6481	chr19	+	708	5	ISM	ENSMUSG00000055491.15	ENSMUST00000062322.11	5205	14	14717	105	-453	3	3prime_fragment	FALSE	canonical	3	437	junction_1	45.5597135636299	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	2441	False	NA	NA	False	NA	NA	NA	46059739	46061243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
tx.6482	chr19	+	3518	13	NIC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCAGAGTTATGTCGT	252	False	NA	NA	False	NA	NA	NA	46064416	46073969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
tx.6483	chr19	+	2493	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	35	995	-8	74	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGGTAATAATTTTCCC	20	False	NA	NA	False	NA	NA	NA	46064443	46072974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
tx.6484	chr19	+	2116	4	ISM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	6994	3	6910	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	401.423301100804	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTTCAGAGTTATGT	6979	False	NA	NA	False	NA	NA	NA	46071402	46073966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_46071803_46071958_46072066_46072189_46072283_46072450
tx.6485	chr19	-	1787	2	FSM	ENSMUSG00000118087.2	ENSMUST00000235942.2	1764	2	-18	-5	-18	5	multi-exon	FALSE	canonical	2	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGACATTTCGCTGCC	NA	False	NA	NA	False	NA	NA	NA	46294068	46292024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_46293290_46293546
tx.6486	chr19	+	1343	4	FSM	ENSMUSG00000025226.12	ENSMUST00000026256.9	1348	4	3	2	0	-1	multi-exon	FALSE	canonical	3	21	junction_3	4.08248290463863	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCGTGGTGCATAGGGG	6316	False	NA	NA	False	NA	NA	NA	46316625	46318883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46316966_46317113_46317268_46317526_46318033_46318540
tx.6487	chr19	-	1092	9	FSM	ENSMUSG00000036748.17	ENSMUST00000051234.9	1833	9	13	728	-9	0	multi-exon	FALSE	canonical	3	390	junction_8	253.325599525591	240	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5835	False	NA	NA	False	NA	NA	NA	46327086	46318978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
tx.6488	chr19	+	2099	8	FSM	ENSMUSG00000025227.15	ENSMUST00000142994.8	2051	8	-46	-2	9	2	multi-exon	FALSE	canonical	3	15	junction_6	80.873294701764	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4207	False	NA	NA	False	NA	NA	NA	46345327	46363693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360620_46360815_46362884
tx.6489	chr19	+	2428	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	82.6896622735489	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4241	False	NA	NA	False	NA	NA	NA	46345361	46363693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
tx.649	chr1	-	967	7	ISM	ENSMUSG00000055067.16	ENSMUST00000068437.13	3360	9	154438	2204	-105057	0	3prime_fragment	FALSE	canonical	3	343	junction_1	12.7758452644912	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGACTTGGCTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	178921967	178784814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899
tx.6490	chr19	+	2237	9	FSM	ENSMUSG00000025227.15	ENSMUST00000086969.13	2278	9	43	-2	-12	2	multi-exon	FALSE	canonical	3	169	junction_1	30.2561977122044	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4241	False	NA	NA	False	NA	NA	NA	46345361	46363693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
tx.6491	chr19	-	2749	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	6	2	-3	1	multi-exon	FALSE	canonical	3	273	junction_3	19.222122671547	123	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTCTGACCTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	46384180	46365251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
tx.6492	chr19	+	1834	7	ISM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	-8	32005	-8	0	5prime_fragment	FALSE	canonical	3	32	junction_6	24.709422404329	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGACTTGGTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	46385348	46442482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597
tx.6493	chr19	+	2575	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	609	396	609	-396	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGCACAGCCCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	46490749	46504891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
tx.6494	chr19	-	932	6	FSM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	-100	11	5	0	multi-exon	FALSE	canonical	3	254	junction_1	35.3870032639103	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGAAATAGTATTAAAT	NA	False	NA	NA	False	NA	NA	NA	46561632	46519545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
tx.6495	chr19	+	1592	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	-2	1615	0	-1615	multi-exon	FALSE	canonical	3	36	junction_10	6.85384611817119	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	46561803	46583719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
tx.6496	chr19	+	1358	11	ISM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	9256	1615	-280	-1615	3prime_fragment	FALSE	canonical	3	36	junction_9	7.18679344353238	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	46571061	46583719	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
tx.6497	chr19	+	3878	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	22	0	-7	0	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGCCGCTCCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	46587544	46645828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
tx.6498	chr19	+	3897	5	FSM	ENSMUSG00000047731.18	ENSMUST00000099376.11	3911	5	23	-9	13	2	multi-exon	FALSE	canonical	3	116	junction_1	18.7666592658363	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCCGCTCCTTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	46587575	46645830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
tx.6499	chr19	+	691	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	8	1477	8	-1477	multi-exon	FALSE	canonical	3	167	junction_1	5.33853912601566	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACCTCAGCTTGTT	9079	False	NA	NA	False	NA	NA	NA	46678352	46690344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
tx.65	chr1	+	1429	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	21	4386	21	456	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGCCTAGCTCATTAC	5634	False	NA	NA	False	NA	NA	NA	34478952	34484051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
tx.650	chr1	-	601	5	ISM	ENSMUSG00000055067.16	ENSMUST00000111134.2	1229	6	22	10057	-14	-10057	5prime_fragment	FALSE	canonical	3	351	junction_3	38.1338104573881	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGAAGCTTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	179345584	179232845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
tx.6500	chr19	+	798	5	NNC	ENSMUSG00000062376.8	novel	2176	5	NA	NA	19	-1477	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	74.0553002829642	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACCTCAGCTTGTT	9090	False	NA	NA	False	NA	NA	NA	46678363	46690344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_46678643_46687994_46688058_46688176_46688221_46689213_46689235_46689953
tx.6501	chr19	+	1740	11	FSM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	0	-4	0	0	multi-exon	FALSE	canonical	3	159	junction_6	16.3612346722367	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTCTGTAGTTTGTCT	5974	False	NA	NA	False	NA	NA	NA	46695896	46729538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
tx.6502	chr19	+	578	5	ISM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	8	31365	8	-515	5prime_fragment	FALSE	canonical	3	174	junction_4	14.0801278403287	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTATATGTTACTACTT	5982	False	NA	NA	False	NA	NA	NA	46695904	46698169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985
tx.6503	chr19	+	1672	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46164	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.6507474747231	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	NA	False	NA	NA	NA	46807934	46867019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
tx.6504	chr19	+	1614	7	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46175	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.9605850546017	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAACGTGCCAAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	46807923	46867016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
tx.6505	chr19	-	2015	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-27	1740	-27	439	multi-exon	TRUE	canonical	3	118	junction_5	15.8666589126981	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGGCTTGTAATGATTT	7165	False	NA	NA	False	NA	NA	NA	46950774	46877007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
tx.6506	chr19	-	1794	10	FSM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	365	0	351	0	multi-exon	FALSE	canonical	3	486	junction_3	49.2396507895471	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	NA	False	NA	NA	NA	47038978	47022055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
tx.6507	chr19	-	370	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	-4	-4	0	0	multi-exon	FALSE	canonical	3	3669	junction_3	1157.30270696804	3192	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	NA	False	NA	NA	False	NA	NA	NA	47079086	47071902	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
tx.6508	chr19	+	306	3	ISM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	-14	38042	-14	-34658	5prime_fragment	FALSE	canonical	3	191	junction_2	3.5	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAAGAGAAAATCCATC	NA	False	NA	NA	False	NA	NA	NA	47079192	47082262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_47079307_47081220_47081340_47082189
tx.6509	chr19	+	2534	3	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	24530	0	24530	0	3prime_fragment	FALSE	canonical	3	77	junction_1	18.5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	1543	False	NA	NA	False	NA	NA	NA	47241879	47247874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_47242248_47245150_47245298_47245855
tx.651	chr1	-	2433	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	16	0	16	0	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTATATGTGTGT	7894	False	NA	NA	False	NA	NA	NA	179373816	179355619	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
tx.6510	chr19	-	1915	10	NNC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	-26	6	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	40.2090217749545	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTATGACTTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	47525584	47489465	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525361
tx.6511	chr19	-	1962	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	19	11	-6	-6	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATTTCAATTCATTT	NA	False	NA	NA	False	NA	NA	NA	47525539	47489482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
tx.6512	chr19	+	1439	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	66	-55	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	621	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAATTTGTTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	47720186	47723972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_47720261_47721068_47721144_47721240_47721428_47721957_47722351_47723262
tx.6513	chr19	+	1487	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	67	-54	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	507	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAATTTGTTTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	47720187	47723973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_47720261_47721068_47721192_47721240_47721428_47721957_47722351_47723262
tx.6514	chr19	+	1144	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	38	0	-22	0	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	334	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTCCAAACCACCTCAG	8506	False	NA	NA	False	NA	NA	NA	47843446	47853229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
tx.6515	chr19	-	2395	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	690	junction_19	186.942819408855	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	5081	False	NA	NA	False	NA	NA	NA	53027050	52979612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
tx.6516	chr19	-	2481	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1598	-1	25	0	multi-exon	FALSE	canonical	3	790	junction_19	199.189727395767	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	5084	False	NA	NA	False	NA	NA	NA	53027047	52979612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
tx.6517	chr19	+	4254	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-200	0	18	0	multi-exon	TRUE	canonical	3	178	junction_5	22.1124214791929	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	2501	False	NA	NA	False	NA	NA	NA	53131204	53235518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
tx.6518	chr19	+	2121	2	ISM	ENSMUSG00000025026.16	ENSMUST00000236296.2	4075	16	49422	0	46329	0	3prime_fragment	FALSE	canonical	3	212	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	NA	False	NA	NA	False	NA	NA	NA	53232805	53235518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_53232837_53233428
tx.6519	chr19	+	2259	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	220	-139	-63	0	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4634	False	NA	NA	False	NA	NA	NA	53318063	53361724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
tx.652	chr1	+	1907	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	38	3	-12	-3	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTCCCCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	179495812	179514751	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
tx.6520	chr19	-	1969	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-19	-2	-19	2	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	314	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGTTAACAAAGGG	NA	False	NA	NA	False	NA	NA	NA	53379028	53367824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
tx.6521	chr19	-	1986	6	FSM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	-23	-485	-19	2	multi-exon	FALSE	canonical	3	22	junction_3	83.1903840596977	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGTTAACAAAGGG	NA	False	NA	NA	False	NA	NA	NA	53379028	53367824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53377733_53377854_53378846
tx.6522	chr19	-	2130	7	NIC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	104.802459682755	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGTGTGTTAACAAAG	NA	False	NA	NA	False	NA	NA	NA	53379007	53367826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53374803_53374988_53377733_53377854_53378846
tx.6523	chr19	-	869	3	ISM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	-23	4151	-19	437	5prime_fragment	FALSE	canonical	3	184	junction_1	12	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTGAATTGCTGACA	NA	False	NA	NA	False	NA	NA	NA	53379028	53372460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_53373028_53377733_53377854_53378846
tx.6524	chr19	+	1408	13	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	11	20699	11	-11361	5prime_fragment	FALSE	canonical	3	969	junction_6	66.6481224208321	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAGAAAAATCTGGAGC	NA	False	NA	NA	False	NA	NA	NA	53588839	53613565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379
tx.6525	chr19	+	1515	14	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	6	17909	6	-8571	5prime_fragment	FALSE	canonical	3	891	junction_13	80.6219903341749	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAGATGAACTACAAA	NA	False	NA	NA	False	NA	NA	NA	53588834	53616355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281
tx.6526	chr19	+	1111	5	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	40723	683	-2237	342	3prime_fragment	FALSE	canonical	3	1084	junction_1	84.6994687114388	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTTGCTTTCAGTTA	6384	False	NA	NA	False	NA	NA	NA	53629551	53633581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
tx.6527	chr19	+	2320	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	52	9	-24	0	multi-exon	FALSE	canonical	3	114	junction_5	6.73954654285478	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGGGAGTGCA	520	False	NA	NA	False	NA	NA	NA	53891781	53918282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
tx.6528	chr19	-	685	3	ISM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	647	-94	599	0	3prime_fragment	FALSE	canonical	3	143	junction_2	31.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGGCTTGTACACTAC	NA	False	NA	NA	False	NA	NA	NA	53932012	53919440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_53919934_53920560_53920637_53931896
tx.6529	chr19	-	764	4	FSM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	-8	-94	-5	0	multi-exon	FALSE	canonical	3	94	junction_3	45.8427263102398	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGGCTTGTACACTAC	NA	False	NA	NA	False	NA	NA	NA	53932667	53919440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932586
tx.653	chr1	-	2644	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	6	1376	6	405	multi-exon	FALSE	canonical	3	14	junction_5	4.06390281902126	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTATGCGTTCCGTGAA	3871	False	NA	NA	False	NA	NA	NA	180023579	179994178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
tx.6530	chr19	-	780	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	114	1149	-35	0	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGGCTTGTACACTAC	NA	False	NA	NA	False	NA	NA	NA	53932944	53919440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
tx.6531	chr19	+	2639	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-25	-976	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	48	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAATTTCCATTAGTTT	3900	False	NA	NA	False	NA	NA	NA	53933278	54020322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
tx.6532	chr19	+	2153	8	ISM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	42572	1680	-513	-1416	3prime_fragment	FALSE	canonical	3	368	junction_1	19.5333310115854	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATATAAGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	53975882	54019882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
tx.6533	chr19	+	2612	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	539	1092	539	950	multi-exon	TRUE	canonical	3	56	junction_1	11.2473730871055	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	55242339	55285060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
tx.6534	chr19	-	2171	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	2	-5	0	5	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTTTAGTTTGCTT	7441	False	NA	NA	False	NA	NA	NA	55304462	55286727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
tx.6535	chr19	+	998	2	NNC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	0	-14080	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTTTTCTTGTTAATG	NA	False	NA	NA	False	NA	NA	NA	55304726	55306990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr19_+_55304977_55306242
tx.6536	chr19	+	1048	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-31	2388	-7	-2388	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCATCTGCTGTCCAA	NA	False	NA	NA	False	NA	NA	NA	55304751	55612605	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
tx.6537	chr19	+	2387	7	FSM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	-37	0	-37	0	multi-exon	FALSE	canonical	3	21	junction_1	6.36177822799744	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGACTGGTCCGGTCTG	NA	False	NA	NA	False	NA	NA	NA	56385523	56430776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_56385750_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
tx.6538	chr19	+	289	2	Antisense	novelGene_ENSMUSG00000097785.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAACAGTCGGTCT	NA	False	NA	NA	False	NA	NA	NA	57322080	57322573	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr19_+_57322225_57322428
tx.6539	chr19	+	1683	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	27	2079	0	1909	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTAGCGCCTCTCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	57441370	57477358	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
tx.654	chr1	-	1948	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	49	0	-7	0	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGTTTGGCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	180083816	180054568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
tx.6540	chr19	+	1131	4	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	-8	-25281	intron_retention	FALSE	canonical	3	27	junction_2	7.36357401145817	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTTTGTTATGAGC	NA	False	NA	NA	False	NA	NA	NA	58500415	58516179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703
tx.6541	chr19	-	1420	7	FSM	ENSMUSG00000025092.8	ENSMUST00000235263.2	1400	7	-17	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_1	4.35889894354067	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTCAGGTGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	58849416	58808147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_58808810_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
tx.6542	chr19	-	579	3	FSM	ENSMUSG00000025092.8	ENSMUST00000237786.2	612	3	38	-5	7	5	multi-exon	FALSE	canonical	2	3	junction_1	1	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGCATGTGTATATTT	NA	False	NA	NA	False	NA	NA	NA	58932048	58917070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_58917395_58920321_58920416_58931887
tx.6543	chr19	-	1625	8	FSM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	-12	-662	-1	1	multi-exon	FALSE	canonical	3	34	junction_7	86.2054972440971	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGGAAGTCATTGTCC	9772	False	NA	NA	False	NA	NA	NA	60215130	60187016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60215075
tx.6544	chr19	-	1912	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	0	123	0	-123	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACATAACTTTGGATTG	9773	False	NA	NA	False	NA	NA	NA	60215129	60187140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
tx.6545	chr19	-	1646	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-1	1	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTGTGTGTGTGTA	9772	False	NA	NA	False	NA	NA	NA	60215130	60187329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
tx.6546	chr19	-	1547	7	NIC	ENSMUSG00000057858.9	novel	951	8	NA	NA	-1	11	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	116.899885942345	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTCCTTAGGTGTGT	9772	False	NA	NA	False	NA	NA	NA	60215130	60187006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60215075
tx.6547	chr19	-	1391	2	ISM	ENSMUSG00000024991.9	ENSMUST00000238125.2	826	4	18923	-722	8884	0	3prime_fragment	FALSE	canonical	3	1494	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	NA	False	NA	NA	False	NA	NA	NA	60751705	60749554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_60750743_60751502
tx.6548	chr19	-	1585	3	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	26415	0	7923	0	3prime_fragment	FALSE	canonical	3	1469	junction_2	12.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	NA	False	NA	-3	True	NA	NA	NA	60752666	60749554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_60750743_60751502_60751703_60752469
tx.6549	chr19	-	2183	4	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	23717	0	5225	0	3prime_fragment	FALSE	canonical	3	1353	junction_3	61.4292727903852	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8836	False	NA	NA	False	NA	NA	NA	60755364	60749554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771
tx.655	chr1	+	3878	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-5	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3142	False	NA	NA	False	NA	NA	NA	180396488	180428819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
tx.6550	chr19	-	2389	6	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	21888	0	3396	0	3prime_fragment	FALSE	canonical	3	1162	junction_5	125.870727335628	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	9773	False	NA	32	True	NA	NA	NA	60757193	60749554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145
tx.6551	chr19	-	5175	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-50	0	-35	0	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8704	False	NA	NA	False	NA	NA	NA	60779131	60749554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
tx.6552	chr19	-	3239	11	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	17735	0	-757	0	3prime_fragment	FALSE	canonical	3	964	junction_7	191.949889294055	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	9707	False	NA	38	True	NA	NA	NA	60761346	60749554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129
tx.6553	chr19	+	2280	8	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	-19	8	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	124.536528531895	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	60800003	60824673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_60800112_60803049_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
tx.6554	chr19	+	2287	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	-12	-8	-6	8	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	60800016	60824673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
tx.6555	chr19	+	2342	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	-27	-8	-1	8	multi-exon	FALSE	canonical	3	273	junction_1	50.1458809375207	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	60800021	60824673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
tx.6556	chr19	+	2355	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	60800028	60824673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
tx.6557	chr19	-	1254	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	51	4	-1	-4	multi-exon	FALSE	canonical	3	10	junction_12	6.9961950774782	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCATCAAAAGGTATAC	NA	False	NA	NA	False	NA	NA	NA	60849866	60827189	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
tx.6558	chr19	-	1446	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	15	17	15	-17	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	191	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTTTGACTTATTC	1462	False	NA	NA	False	NA	NA	NA	60862979	60852505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
tx.6559	chr19	-	1435	8	ISM	ENSMUSG00000059326.8	ENSMUST00000237386.2	1771	11	686	-9	-7	0	3prime_fragment	FALSE	canonical	3	89	junction_6	20.6861878398834	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9864	False	NA	NA	False	NA	NA	NA	61215128	61212839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962
tx.656	chr1	+	2224	13	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	19429	2	-1109	0	3prime_fragment	FALSE	canonical	3	1794	junction_3	197.155818241985	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	180415922	180428817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
tx.6560	chr19	-	443	3	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_2	4	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGTGTCAGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	61301962	61286917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr19_-_61287117_61287295_61287423_61301845
tx.6561	chr2	+	245	2	FSM	ENSMUSG00000026643.17	ENSMUST00000155761.2	2450	2	-71	2276	-2	-2276	multi-exon	FALSE	canonical	3	266	junction_1	0	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAAGGAGAAGCCAA	985	False	NA	NA	False	NA	NA	NA	3285246	3305896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_3285444_3305848
tx.6562	chr2	+	1784	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-2	2679	-2	0	multi-exon	TRUE	canonical	3	230	junction_10	26.4695873268632	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTAGTTGTTAACAAT	985	False	NA	NA	False	NA	NA	NA	3285246	3327235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
tx.6563	chr2	-	1042	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	0	177	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGGATCCTGCATGGA	2317	False	NA	NA	False	NA	NA	NA	3333680	3329985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_3330911_3333563
tx.6564	chr2	+	566	4	FSM	ENSMUSG00000026644.8	ENSMUST00000228935.2	534	4	-27	-5	-27	5	multi-exon	FALSE	canonical	3	13	junction_2	3.77123616632825	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGTATGGATATTTA	1011	False	NA	NA	False	NA	NA	NA	3337177	3342035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_3337259_3341369_3341491_3341591_3341655_3341734
tx.6565	chr2	+	1397	11	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	7	5268	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	9.7082439194738	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGATATTCATTCTTG	1009	False	NA	NA	False	NA	NA	NA	3425174	3448511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110
tx.6566	chr2	-	1754	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	39	2	-32	-2	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	1015	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGAGTCTTTGTTTTC	3981	False	NA	NA	False	NA	NA	NA	3513812	3489888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
tx.6567	chr2	+	3114	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	35	7	15	-7	multi-exon	FALSE	canonical	3	121	junction_1	8.49836585598797	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCAGCCATGTTTGTCT	979	False	NA	NA	False	NA	NA	NA	3714529	3783172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
tx.6568	chr2	-	3454	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-37	105	-10	-105	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTATTGACTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	4656934	4626973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
tx.6569	chr2	-	3093	10	NIC	ENSMUSG00000039449.15	novel	3522	10	NA	NA	-22	-498	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	52.5378170675393	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCACATAAAGAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	4656946	4627366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648596_4650379_4650485_4653051_4653130_4656726
tx.657	chr1	+	2003	11	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	20489	0	-49	0	3prime_fragment	FALSE	canonical	3	1794	junction_1	205.96283645357	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	180416982	180428819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
tx.6570	chr2	-	478	2	ISM	ENSMUSG00000039449.15	ENSMUST00000140818.8	551	5	-38	9117	-12	-4364	5prime_fragment	FALSE	canonical	3	186	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGATCTTGAATTCAGG	NA	False	NA	NA	False	NA	NA	NA	4656936	4652861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_4653130_4656726
tx.6571	chr2	+	2359	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	243	2717	243	-297	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	4335	False	NA	NA	False	NA	NA	NA	4886617	4912651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
tx.6572	chr2	+	2900	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	243	348	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCAGAAACTATACTG	4335	False	NA	NA	False	NA	NA	NA	4886617	4913296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
tx.6573	chr2	+	2931	8	ISM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	2086	-328	-53	328	3prime_fragment	FALSE	canonical	3	440	junction_1	51.033402426894	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATGTTGGAACCCTC	6859	False	NA	NA	False	NA	NA	NA	4889141	4913276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
tx.6574	chr2	+	1435	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	3	0	3	0	multi-exon	FALSE	canonical	3	390	junction_4	31.960669188864	602	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATATTAAGTCAATTTCT	994	False	NA	NA	False	NA	NA	NA	4923832	4943541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
tx.6575	chr2	-	3456	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	38	0	0	0	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	NA	False	NA	NA	NA	5017564	4995534	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
tx.6576	chr2	-	2096	11	ISM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	17845	0	-9003	0	3prime_fragment	FALSE	canonical	3	118	junction_4	15.7800506970035	30	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	NA	False	NA	NA	NA	5051011	5025452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
tx.6577	chr2	-	1255	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	203	369	-20	2	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	1136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTACTGTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	5849772	5799473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
tx.6578	chr2	-	1223	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-21	2	combination_of_known_splicesites	FALSE	canonical	3	91	junction_9	296.801433468727	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTACTGTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	5849773	5799473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
tx.6579	chr2	-	1008	8	NIC	ENSMUSG00000039128.14	novel	600	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	373.173538445478	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCATCATTGCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	5849774	5814365	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
tx.658	chr1	+	1512	8	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	25216	0	2862	0	3prime_fragment	FALSE	canonical	3	1798	junction_3	193.759687052107	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	655	False	NA	NA	False	NA	NA	NA	180421709	180428819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
tx.6580	chr2	+	1379	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	484	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1934	False	NA	NA	False	NA	NA	NA	5850061	5873551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
tx.6581	chr2	-	2401	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	52	-5	-46	5	multi-exon	TRUE	canonical	3	221	junction_3	37.3630833845388	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTCTAAGAGTATTTC	NA	False	NA	NA	False	NA	NA	NA	5900191	5875792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
tx.6582	chr2	-	1366	6	ISM	ENSMUSG00000025816.16	ENSMUST00000026926.5	756	8	-57	3935	-42	18	5prime_fragment	FALSE	canonical	3	245	junction_1	28.7193314685422	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5900187	5886600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
tx.6583	chr2	-	523	5	ISM	ENSMUSG00000025816.16	ENSMUST00000026926.5	756	8	-72	4920	41	-967	5prime_fragment	FALSE	canonical	3	272	junction_1	20.6397674405503	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGGTAAAGATGTTT	NA	False	NA	NA	False	NA	NA	NA	5900202	5887585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
tx.6584	chr2	-	1217	3	ISM	ENSMUSG00000025815.14	ENSMUST00000026924.7	3852	18	-23	33000	-23	-5296	5prime_fragment	FALSE	canonical	3	50	junction_2	4	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGATAGCATTAGACCT	NA	False	NA	NA	False	NA	NA	NA	5947577	5934988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_5935798_5937197_5937354_5947325
tx.6585	chr2	+	328	2	ISM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	0	98990	0	-97789	5prime_fragment	FALSE	canonical	3	197	junction_1	0	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGAGAAGGTGAAGGC	1678	False	NA	NA	False	NA	NA	NA	5956279	5962524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_5956365_5962281
tx.6586	chr2	+	1882	6	ISM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	88656	5	-10302	0	3prime_fragment	FALSE	canonical	3	220	junction_2	12.63962024746	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGATTTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	6044935	6061509	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
tx.6587	chr2	-	2566	14	NIC	ENSMUSG00000002107.19	novel	1721	14	NA	NA	132	57	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	6.4284868971619	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACTATTCCAGACTA	7985	False	NA	NA	False	NA	NA	NA	6877276	6549560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
tx.6588	chr2	-	2329	3	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-13	36683	-13	-35157	5prime_fragment	FALSE	canonical	3	137	junction_1	7	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGAAGAAGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	10053420	9956045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_9957757_10047237_10047481_10053045
tx.6589	chr2	-	619	2	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-13	127874	-13	-126348	5prime_fragment	FALSE	canonical	3	151	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCTATCTAATCTCCC	NA	False	NA	NA	False	NA	NA	NA	10053420	10047236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_10047481_10053045
tx.659	chr1	-	1037	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	71	1733	-14	132	multi-exon	TRUE	canonical	3	2337	junction_3	156.5907617539	1425	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	NA	NA	NA	180641126	180630129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
tx.6590	chr2	-	1095	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	71	0	5	0	multi-exon	TRUE	canonical	3	3857	junction_2	289.314942238504	1464	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9575	False	NA	NA	False	NA	NA	NA	10085250	10060840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
tx.6591	chr2	+	1406	5	FSM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	-39	105	-8	-105	multi-exon	FALSE	canonical	3	38	junction_2	5.40832691319598	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTTATTTTATCTTTG	4786	False	NA	NA	False	NA	NA	NA	10085395	10097512	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096528
tx.6592	chr2	-	621	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8799	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	241.59608164593	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	10370053	10344090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369968
tx.6593	chr2	-	1806	14	FSM	ENSMUSG00000026773.20	ENSMUST00000192844.6	2188	14	-29	411	-3	-411	multi-exon	FALSE	canonical	3	18	junction_1	9.7203501531885	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAGCCCACCAAAAAGCCT	6305	False	NA	NA	False	NA	NA	NA	11506915	11485121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
tx.6594	chr2	-	978	8	ISM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	7853	2	-4551	0	3prime_fragment	FALSE	canonical	3	1239	junction_6	98.9761876124036	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	4816	False	NA	NA	False	NA	NA	NA	11600220	11590249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141
tx.6595	chr2	-	1046	9	ISM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	6585	2	-5819	0	3prime_fragment	FALSE	canonical	3	1239	junction_6	100.601239430735	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	3548	False	NA	NA	False	NA	NA	NA	11601488	11590249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439
tx.6596	chr2	-	454	3	FSM	ENSMUSG00000037197.12	ENSMUST00000150369.2	663	3	211	-2	211	0	multi-exon	FALSE	canonical	3	1364	junction_2	31.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	4962	False	NA	NA	False	NA	NA	NA	11591768	11590249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_11590540_11590644_11590718_11591677
tx.6597	chr2	-	828	4	ISM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	29091	-2	738	0	3prime_fragment	FALSE	canonical	3	293	junction_3	11.7756811551038	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	11753302	11747383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174
tx.6598	chr2	-	3535	21	FSM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	34	-2	0	0	multi-exon	FALSE	canonical	3	183	junction_20	31.6521721213569	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	11782359	11747383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
tx.6599	chr2	+	1587	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	31	0	-2	0	multi-exon	FALSE	canonical	3	24	junction_3	18.7742435858871	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4799	False	NA	NA	False	NA	NA	NA	11783332	11795136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
tx.660	chr1	+	712	5	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	-44	6914	-44	-5054	5prime_fragment	FALSE	canonical	3	433	junction_2	47.0604664235279	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGGAAATGCTTTTGG	NA	False	NA	NA	False	NA	NA	NA	180678647	180688764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662
tx.6600	chr2	-	1684	8	NIC	ENSMUSG00000026767.13	novel	1843	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	51.1843407175855	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	NA	False	NA	NA	NA	12424254	12352073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12423969
tx.6601	chr2	-	2310	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	32	2	-3	1	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTTGCACTTTTACATT	NA	False	NA	NA	False	NA	NA	NA	12424249	12352075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
tx.6602	chr2	+	1863	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	3	-634	3	0	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTGTTTTCCACTTAT	4715	False	NA	NA	False	NA	NA	NA	12928854	13006425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
tx.6603	chr2	-	1512	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	79	-45	-3	45	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTGTGCACATTTTTT	7122	False	NA	NA	False	NA	NA	NA	13276147	13081777	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
tx.6604	chr2	-	1721	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	-13	2080	-13	-2080	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGTATGTCAATTT	9016	False	NA	NA	False	NA	NA	NA	13549492	13515904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
tx.6605	chr2	-	2533	10	NIC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	-2	-1147	combination_of_known_junctions	FALSE	canonical	3	4	junction_9	11.4998658070539	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTACTCTTTTTGTTAA	9027	False	NA	NA	False	NA	NA	NA	13549481	13514971	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13549379
tx.6606	chr2	+	1838	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	355	0	-15	0	multi-exon	FALSE	canonical	3	229	junction_1	35.7786161694384	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGTTATTTTA	76	False	NA	NA	False	NA	NA	NA	13579117	13587637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
tx.6607	chr2	-	592	4	NNC	ENSMUSG00000063275.16	novel	871	6	NA	NA	10764	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.7626728046147	4	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATTGTTTCTTGAAA	9840	False	NA	NA	False	NA	NA	NA	14050067	14031639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_14031818_14040589_14040769_14049593_14049683_14049921
tx.6608	chr2	-	842	5	NNC	ENSMUSG00000063275.16	novel	871	6	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.8018691180654	11	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	14060794	14031641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_14031818_14040589_14040769_14049593_14049683_14049921_14050067_14060541
tx.6609	chr2	-	812	2	FSM	ENSMUSG00000086657.3	ENSMUST00000152524.2	801	2	75	-86	-11	86	multi-exon	FALSE	canonical	3	11	junction_1	0	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTATGGATTAGATTGA	NA	False	NA	NA	False	NA	NA	NA	14078670	14075056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_14075592_14078393
tx.661	chr1	+	3226	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	-16	3	-16	-3	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGTTTTGGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	180678675	180695675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
tx.6610	chr2	+	2896	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	14	2090	4	4	multi-exon	TRUE	canonical	3	181	junction_8	24.7443735759998	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGATTTTGTTTAATA	4696	False	NA	NA	False	NA	NA	NA	14078922	14152355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
tx.6611	chr2	-	2443	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-21	475	11	-475	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAAAGGTGAAGTCT	957	False	NA	NA	False	NA	NA	NA	15054112	15000416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
tx.6612	chr2	-	1402	5	ISM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-21	42421	11	-1117	5prime_fragment	FALSE	canonical	3	61	junction_4	7.69334127671456	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTATGGTCAAAACTAA	957	False	NA	NA	False	NA	NA	NA	15054112	15042362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
tx.6613	chr2	+	1297	6	FSM	ENSMUSG00000017418.15	ENSMUST00000239125.2	3608	6	-36	2347	0	214	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCCGTGTGTGTGTGTG	4705	False	NA	NA	False	NA	NA	NA	15060097	15081630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
tx.6614	chr2	+	2797	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	-4	4154	-4	-4	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACACTTTTGGTTCAAAT	95	False	NA	NA	False	NA	NA	NA	16361110	16756496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
tx.6615	chr2	+	2396	2	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATTTCTGCAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	17940972	17953265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_17941086_17950982
tx.6616	chr2	+	683	2	Antisense	novelGene_ENSMUSG00000054057.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAATTTCTTACTTGTTT	4465	False	NA	NA	False	NA	NA	NA	18032430	18033216	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_+_18032675_18032777
tx.6617	chr2	+	576	3	Antisense	novelGene_ENSMUSG00000054074.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGCCTGACTCACAGA	3272	False	NA	NA	False	NA	NA	NA	18052287	18053836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_+_18052359_18052997_18053097_18053430
tx.6618	chr2	+	3467	4	NIC	ENSMUSG00000026743.17	novel	651	6	NA	NA	-53	20226	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	71.2242156073964	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGTATGTATGTTT	4589	False	NA	NA	False	NA	NA	NA	18069393	18090292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321
tx.6619	chr2	+	376	2	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTTAAGGAGAGAGGAAAA	4697	False	NA	NA	False	NA	NA	NA	18458465	18458964	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_18458528_18458650
tx.6620	chr2	+	920	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	7	8	-3	-7	multi-exon	FALSE	canonical	3	388	junction_2	22.7909756576714	169	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGCATTCTGTTTGGAG	67	False	NA	NA	False	NA	NA	NA	18677240	18681034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
tx.6621	chr2	+	1186	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	10	0	10	0	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	139	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTCTCAGTCTGT	4794	False	NA	NA	False	NA	NA	NA	19376456	19399787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
tx.6622	chr2	+	939	4	NNC	ENSMUSG00000036617.18	novel	3074	4	NA	NA	-161	5918	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	82.3097132110718	19	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTGGTTGTGATGTC	4635	False	NA	NA	False	NA	NA	NA	20524440	20673045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20672887
tx.6623	chr2	+	2615	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	10	1274	-5	456	multi-exon	FALSE	canonical	3	53	junction_1	4.5	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTGCTTTATTTTAT	4794	False	NA	NA	False	NA	NA	NA	21210544	21218546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_21210657_21214695_21214853_21216200
tx.6624	chr2	+	1600	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	37	5	-36	-5	multi-exon	FALSE	canonical	3	239	junction_4	19.641792178923	184	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGTGGTTTGTCTTTGT	5645	False	NA	NA	False	NA	NA	NA	22785570	22830273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
tx.6625	chr2	-	3061	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	51	291	-3	0	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	22930202	22830375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
tx.6626	chr2	-	3341	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	8	11	0	2	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTGAAATTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	22930199	22830095	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
tx.6627	chr2	+	3640	13	FSM	ENSMUSG00000026781.18	ENSMUST00000227809.2	1986	13	-55	-1599	-21	-6	multi-exon	FALSE	canonical	3	36	junction_1	25.6850583457041	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	NA	NA	NA	22958157	23004516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
tx.6628	chr2	+	3632	13	FSM	ENSMUSG00000026781.18	ENSMUST00000028121.15	3630	13	-7	5	-6	-2	multi-exon	FALSE	canonical	3	36	junction_1	26.6993289553627	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGCTAACTGTATTGA	NA	False	NA	NA	False	NA	NA	NA	22958172	23004520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
tx.6629	chr2	-	2980	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	101	2509	-26	-2509	multi-exon	TRUE	canonical	3	112	junction_2	17.5310821963508	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATCTGCTGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	23045935	23008126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
tx.663	chr1	+	2473	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGAGCGAGTCATCGA	NA	False	NA	NA	False	NA	NA	NA	180720672	180726668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
tx.6630	chr2	-	1292	7	FSM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	-15	-76	-15	76	multi-exon	FALSE	canonical	3	131	junction_4	13.2759180473518	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGGCACTTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	23045924	23026619	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
tx.6631	chr2	+	2937	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	146	1624	-3	-1624	multi-exon	TRUE	canonical	3	665	junction_5	65.7463325738674	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATATTACTATCTCACT	7219	False	NA	NA	False	NA	NA	NA	23046526	23087648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
tx.6632	chr2	-	1263	3	ISM	ENSMUSG00000004113.19	ENSMUST00000100348.10	7182	47	154829	-15	-684	15	3prime_fragment	FALSE	canonical	2	6	junction_1	0.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGTGTACTGCCTTC	NA	False	NA	NA	False	NA	NA	NA	24498230	24496371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_24497113_24497453_24497699_24497953
tx.6633	chr2	-	443	2	NNC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	0	-49124	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTTCAAATTTATTT	9590	False	NA	NA	False	NA	NA	NA	24809626	24803028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_24803411_24809565
tx.6634	chr2	-	1620	8	FSM	ENSMUSG00000026972.16	ENSMUST00000028349.14	1666	8	46	0	-18	0	multi-exon	FALSE	canonical	3	62	junction_2	7.55658923167897	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9363	False	NA	NA	False	NA	NA	NA	24825218	24815363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
tx.6635	chr2	-	2251	6	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-20	0	intron_retention	FALSE	canonical	3	75	junction_2	4.57820925690384	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9361	False	NA	NA	False	NA	NA	NA	24825220	24815363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_24815689_24815767_24816461_24816556_24816740_24816889_24817045_24817137_24817852_24825039
tx.6636	chr2	+	811	3	ISM	ENSMUSG00000026974.12	ENSMUST00000148042.3	1103	6	3034	-148	3034	148	3prime_fragment	FALSE	canonical	3	887	junction_2	9.5	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGTCGTGTAGTCAAG	NA	False	NA	NA	False	NA	NA	NA	24843255	24849426	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_24843389_24848047_24848229_24848929
tx.6637	chr2	+	574	2	ISM	ENSMUSG00000026974.12	ENSMUST00000148042.3	1103	6	7926	-144	7926	144	3prime_fragment	FALSE	canonical	3	887	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGAGACTGTCGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	24848147	24849422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_24848229_24848929
tx.6638	chr2	+	1631	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	8	-5	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	28.4250659629841	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATTATGTGTATGCA	NA	False	NA	NA	False	NA	NA	NA	24852442	24862168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_24852638_24853034_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
tx.6639	chr2	+	1633	9	FSM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	33	0	-8	0	multi-exon	FALSE	canonical	3	62	junction_3	22.9945645751338	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	24852444	24862175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
tx.664	chr1	+	1580	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	384	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	16	False	NA	NA	False	NA	NA	NA	180731857	180735653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
tx.6640	chr2	+	1409	7	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	41.9076365356005	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	24852449	24862175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_24852638_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
tx.6641	chr2	+	1730	8	NIC	ENSMUSG00000026975.11	novel	1554	8	NA	NA	6	-5	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	44.442120120628	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATTATGTGTATGCA	NA	False	NA	NA	False	NA	NA	NA	24852440	24862168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_24852823_24853034_24853169_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
tx.6642	chr2	-	740	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	34	2	34	-2	multi-exon	FALSE	canonical	3	317	junction_1	0	261	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATGTGTTTTGAATCAA	NA	False	NA	NA	False	NA	NA	NA	24865076	24864130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_24864694_24864899
tx.6643	chr2	-	2556	13	FSM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	77	4	-31	0	multi-exon	TRUE	canonical	3	539	junction_7	54.5501807716732	276	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	NA	NA	NA	25101424	25089727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
tx.6644	chr2	-	1551	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	45	2	-3	-2	multi-exon	FALSE	canonical	3	1343	junction_2	25.8499946271217	1832	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	NA	False	NA	NA	NA	25114669	25112173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
tx.6645	chr2	-	2333	14	FSM	ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	6	-3	6	3	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCGCTCACTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	25145415	25137237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
tx.6646	chr2	-	1000	2	FSM	ENSMUSG00000026966.7	ENSMUST00000141470.2	1006	2	53	-47	19	0	multi-exon	FALSE	canonical	3	843	junction_1	0	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	NA	False	NA	NA	NA	25162397	25161050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25161594_25161940
tx.6647	chr2	-	858	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	4	0	-2	0	multi-exon	FALSE	canonical	3	707	junction_2	68	392	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	NA	False	NA	NA	NA	25162424	25161050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25161594_25161940_25162141_25162309
tx.6648	chr2	-	851	3	FSM	ENSMUSG00000026966.7	ENSMUST00000133697.2	845	3	-6	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	398.5	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	NA	False	NA	NA	NA	25162428	25161050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25161594_25161940_25162141_25162320
tx.6649	chr2	+	2683	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	18	303	18	-303	multi-exon	TRUE	canonical	3	410	junction_2	48.8355374929182	157	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGGATCCCAT	NA	False	NA	NA	False	NA	NA	NA	25162507	25175624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
tx.665	chr1	+	1607	4	FSM	ENSMUSG00000038793.9	ENSMUST00000037361.9	1620	4	14	-1	14	1	multi-exon	FALSE	canonical	3	187	junction_2	33.0790299468141	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGTTTCCTTATTT	NA	False	NA	NA	False	NA	NA	NA	180762600	180765966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_180762925_180764111_180764359_180764573_180764820_180765176
tx.6650	chr2	+	3736	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	19	0	-14	0	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3984	False	NA	NA	False	NA	NA	NA	25222759	25242224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
tx.6651	chr2	+	1148	8	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	21	6711	-12	-199	5prime_fragment	FALSE	canonical	3	355	junction_7	24.0823417398198	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGACTTCAGACAGCAC	3986	False	NA	NA	False	NA	NA	NA	25222761	25235513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417
tx.6652	chr2	-	465	4	ISM	ENSMUSG00000026958.14	ENSMUST00000139108.8	2167	10	2934	14	-537	0	3prime_fragment	FALSE	canonical	3	276	junction_3	26.0298973404728	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	3429	False	NA	NA	False	NA	NA	NA	25243423	25242301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371
tx.6653	chr2	-	1676	13	FSM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	6	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	27.0014145719977	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9007	False	NA	NA	False	NA	NA	NA	25246365	25242301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
tx.6654	chr2	+	1190	2	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGCCTGTGTATATG	3199	False	NA	NA	False	NA	NA	NA	25246442	25248018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_25247559_25247944
tx.6655	chr2	-	814	5	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	1707	1601	153	0	3prime_fragment	FALSE	canonical	3	362	junction_3	47.3781331417775	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTGTCTGTCTATTT	1385	False	NA	NA	False	NA	NA	NA	25253987	25251501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817
tx.6656	chr2	-	1715	9	FSM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	33	1601	33	0	multi-exon	FALSE	canonical	3	362	junction_3	36.5288841192829	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTGTCTGTCTATTT	NA	False	NA	NA	False	NA	NA	NA	25255661	25251501	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
tx.6657	chr2	+	1693	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	18	1410	5	0	multi-exon	FALSE	canonical	3	90	junction_3	10.077477638554	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTGTATTTCTCATAA	6675	False	NA	NA	False	NA	NA	NA	25262350	25266815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
tx.6658	chr2	+	1483	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	-1	3	-1	0	multi-exon	FALSE	canonical	3	17	junction_4	4.24264068711928	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTTCTGGGTTCAC	3125	False	NA	NA	False	NA	NA	NA	25293081	25299503	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
tx.6659	chr2	-	923	7	FSM	ENSMUSG00000047617.12	ENSMUST00000114261.9	981	7	58	0	-5	0	multi-exon	FALSE	canonical	3	6	junction_6	3.94405318873308	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTTGTGAAGATTGGC	5294	False	NA	NA	False	NA	NA	NA	25351048	25349493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25349714_25349786_25349872_25350020_25350087_25350178_25350370_25350456_25350507_25350666_25350728_25350798
tx.666	chr1	+	1968	10	NNC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	5168	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15.1836494255019	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCTCATGCTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	180792799	180802673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_180792955_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
tx.6660	chr2	+	2299	9	FSM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	89	0	-20	0	multi-exon	FALSE	canonical	3	164	junction_1	35.5176012703561	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	25390850	25395483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
tx.6661	chr2	-	2138	11	FSM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	30	876	0	8	multi-exon	FALSE	canonical	3	80	junction_10	20.6164982477626	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTTCATCTGGCTCCT	NA	False	NA	NA	False	NA	NA	NA	25436922	25408869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877_25429097_25436873
tx.6662	chr2	-	2090	10	ISM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	7855	876	55	8	3prime_fragment	FALSE	canonical	3	106	junction_2	15.0562730456342	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTTCATCTGGCTCCT	NA	False	NA	NA	False	NA	NA	NA	25429097	25408869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877
tx.6663	chr2	-	2149	11	FSM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	2	0	2	0	multi-exon	FALSE	canonical	3	14	junction_9	38.6141165896619	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	NA	False	NA	NA	NA	25436920	25408877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428856_25429097_25436873
tx.6664	chr2	+	711	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	11	0	11	0	multi-exon	FALSE	canonical	3	2396	junction_4	232.166965781095	1260	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCCTGGATTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	25447869	25452094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
tx.6665	chr2	-	481	2	NIC	ENSMUSG00000036504.7	novel	937	3	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	5531	False	NA	NA	False	NA	NA	NA	25464905	25463441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_25463712_25464694
tx.6666	chr2	-	622	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	315	0	-31	0	multi-exon	FALSE	canonical	3	774	junction_2	2.5	560	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	5515	False	NA	NA	False	NA	NA	NA	25464921	25463441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25463712_25464199_25464325_25464694
tx.6667	chr2	-	808	5	NNC	ENSMUSG00000026939.13	novel	795	5	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	17.3403431338598	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGCTCTGAAGCAATTA	NA	False	NA	NA	False	NA	NA	NA	25511984	25510113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511768_25511945
tx.6668	chr2	-	764	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	-4	35	-4	2	multi-exon	FALSE	canonical	3	29	junction_4	9.85837207656518	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGCTCTGAAGCAATTA	NA	False	NA	NA	False	NA	NA	NA	25512021	25510113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
tx.6669	chr2	-	1689	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	163	0	-18	0	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	25911596	25888554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
tx.667	chr1	+	2072	9	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	21244	-3	5212	3	3prime_fragment	FALSE	canonical	3	35	junction_5	8.24621125123532	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTCTCATGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	180792843	180802671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
tx.6670	chr2	-	723	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	23	2170	13	-2170	multi-exon	FALSE	canonical	3	313	junction_2	24.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGCCTGGGCTCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	26242099	26240302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26240571_26241346_26241487_26241784
tx.6671	chr2	-	586	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	10	2170	10	-2170	multi-exon	FALSE	canonical	3	60	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGCCTGGGCTCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	26242102	26240302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26240571_26241784
tx.6672	chr2	-	1109	9	ISM	ENSMUSG00000026928.15	ENSMUST00000100303.10	1947	12	2101	13	2101	-2	3prime_fragment	FALSE	canonical	3	13	junction_2	6.02987354759617	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGTTGGTTGGATATG	NA	False	NA	NA	False	NA	NA	NA	26247658	26242200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_26242424_26242496_26242574_26242952_26243027_26244368_26244418_26244841_26244884_26245344_26245537_26246769_26246896_26247196_26247341_26247476
tx.6673	chr2	+	1843	11	FSM	ENSMUSG00000026926.15	ENSMUST00000114093.2	1638	11	-2	-203	-2	203	multi-exon	FALSE	canonical	3	1351	junction_8	100.774054200474	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAACTACTGCAAAGCAA	651	False	NA	NA	False	NA	NA	NA	26279357	26284156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529
tx.6674	chr2	+	2200	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	7	928	-2	-928	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	285	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTGTCTTTGCCTCAG	651	False	NA	NA	False	NA	NA	NA	26279357	26286206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
tx.6675	chr2	+	1500	12	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	742	1396	725	-1396	3prime_fragment	FALSE	canonical	3	1351	junction_7	95.7629649423275	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTCTTTCAAACAC	1386	False	NA	NA	False	NA	NA	NA	26280092	26285738	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
tx.6676	chr2	+	1150	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	14	-1	14	0	multi-exon	FALSE	canonical	3	256	junction_1	46.4239970273995	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	186	False	NA	NA	False	NA	NA	NA	26476655	26482694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
tx.6677	chr2	+	1118	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	104.879692982007	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	187	False	NA	NA	False	NA	NA	NA	26476656	26482694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482262_26482429
tx.6678	chr2	-	1398	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	87	4	-34	-4	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	356	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGGGTAGAGTTCTTT	9568	False	NA	NA	False	NA	NA	NA	26494257	26483072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
tx.6679	chr2	-	1285	6	FSM	ENSMUSG00000026922.14	ENSMUST00000131940.8	1273	6	-34	22	-34	-22	multi-exon	FALSE	canonical	3	206	junction_5	210.357219985433	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGAGGTCTCTTTCAGA	9568	False	NA	NA	False	NA	NA	NA	26494257	26483090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494135
tx.668	chr1	-	1702	9	FSM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	37	2	37	-2	multi-exon	FALSE	canonical	3	106	junction_5	19.7214984217731	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGGGCCAGATACC	5765	False	NA	NA	False	NA	NA	NA	180845097	180817120	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
tx.6680	chr2	-	742	4	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_3	6.37704215656966	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGAATCTTTCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	26530256	26527187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_-_26527646_26528052_26528108_26529441_26529484_26530069
tx.6681	chr2	+	546	2	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTTGGCTTCCATTT	NA	False	NA	NA	False	NA	NA	NA	26768806	26776546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_26769186_26776379
tx.6682	chr2	-	2633	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	2	336	2	1	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTGTTCGTATTTGT	NA	False	NA	NA	False	NA	NA	NA	26792889	26780782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
tx.6683	chr2	-	2102	2	ISM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	9865	337	-403	0	3prime_fragment	FALSE	canonical	3	256	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTGTTCGTATTTG	NA	False	NA	-16	True	NA	NA	NA	26783026	26780783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_26782738_26782878
tx.6684	chr2	-	1369	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	-73	-323	35	-3	multi-exon	FALSE	canonical	3	133	junction_1	17.7951304200522	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTGTCTGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	26800654	26795276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
tx.6685	chr2	+	908	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	0	6	0	-6	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	725	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTGCCTTTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	26800775	26803324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
tx.6686	chr2	-	997	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	176	0	-9	0	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	NA	False	NA	NA	NA	26806366	26803394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
tx.6687	chr2	+	1186	6	FSM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	17	0	3	0	multi-exon	TRUE	canonical	3	245	junction_5	33.4388995034227	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTGTATCATTGTT	NA	False	NA	NA	False	NA	NA	NA	26806395	26810195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
tx.6688	chr2	+	843	4	ISM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	1133	-4	72	4	3prime_fragment	FALSE	canonical	3	245	junction_3	24.9443825784929	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATCATTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	26807511	26810199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_26807544_26808884_26809068_26809203_26809371_26809738
tx.6689	chr2	-	2810	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	471	0	-74	0	multi-exon	TRUE	canonical	3	778	junction_1	38.262252939418	280	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGGTCCTATATGG	NA	False	NA	NA	False	NA	NA	NA	26823469	26810051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
tx.669	chr1	-	3544	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	16	5832	16	289	multi-exon	TRUE	canonical	3	480	junction_18	71.7805568876937	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCATGCCAGAAAAGTCC	NA	False	NA	NA	False	NA	NA	NA	180971753	180920534	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
tx.6690	chr2	-	2238	8	FSM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	43	0	-19	0	multi-exon	FALSE	canonical	3	152	junction_5	23.9344342497821	90	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	26854355	26843574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
tx.6691	chr2	+	1607	2	NNC	ENSMUSG00000109946.2	novel	509	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTCTCATTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	27332514	27334234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_27332827_27332939
tx.6692	chr2	-	3627	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	36	1609	3	655	multi-exon	TRUE	canonical	3	192	junction_7	30.2258714644446	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGTTGGGTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	27365662	27337199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
tx.6693	chr2	-	1639	9	ISM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	53	7413	20	4	5prime_fragment	FALSE	canonical	3	192	junction_4	32.1548985381699	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAGAAGAAAGACA	NA	False	NA	NA	False	NA	NA	NA	27365645	27343003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
tx.6694	chr2	+	2846	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	44	0	44	0	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	27405212	27426547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
tx.6695	chr2	+	1869	2	ISM	ENSMUSG00000026917.16	ENSMUST00000140396.2	1031	12	14005	-1492	5994	0	3prime_fragment	FALSE	canonical	3	1440	junction_1	0	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	27423777	27426547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_27423868_27424768
tx.6696	chr2	-	785	3	FSM	ENSMUSG00000026831.17	ENSMUST00000086370.11	812	3	27	0	11	0	multi-exon	FALSE	canonical	3	128	junction_1	7	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCCACGCCTCTTATT	NA	False	NA	NA	False	NA	NA	NA	28356317	28352012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_28352447_28355148_28355228_28356045
tx.6697	chr2	+	2071	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	-1	10	-1	3	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	343	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCAGACTCTCTAG	NA	False	NA	NA	False	NA	NA	NA	28358076	28361180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
tx.6698	chr2	-	2472	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	263	4	-28	-4	multi-exon	TRUE	canonical	3	147	junction_7	20.5992858738452	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCACTGGTGTTTGATG	NA	False	NA	NA	False	NA	NA	NA	28473028	28456326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
tx.6699	chr2	-	6992	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-51	0	15	0	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	28730349	28712316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
tx.67	chr1	+	903	7	FSM	ENSMUSG00000026123.12	ENSMUST00000156687.8	5176	7	-40	4313	-40	-4313	multi-exon	FALSE	canonical	3	235	junction_4	21.2733531808118	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTACACATATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	34889016	34908724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380
tx.670	chr1	-	1981	14	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	17	26835	17	-17991	5prime_fragment	FALSE	canonical	3	480	junction_9	88.1404876440457	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTATGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	180971752	180941537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
tx.6700	chr2	+	3279	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-8	0	-8	0	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGGACTCAGCAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	28730462	28795583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
tx.6701	chr2	+	1459	5	ISM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	35252	0	18570	0	3prime_fragment	FALSE	canonical	3	109	junction_3	15.6744218394172	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGGACTCAGCAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	28765722	28795583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
tx.6702	chr2	+	1332	4	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	157	712	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	94.7886537982732	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAATACTTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	29015160	29021173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_29015209_29015863_29015976_29016885_29017076_29020191
tx.6703	chr2	+	1650	4	ISM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	192	51310	192	712	5prime_fragment	FALSE	canonical	3	157	junction_1	22.939534045447	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAATACTTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	29015195	29021173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191
tx.6704	chr2	+	1256	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	-7	5	-7	-5	multi-exon	FALSE	canonical	3	144	junction_3	14.0393034305954	153	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGGCTCTGTGTTCTGC	NA	False	NA	NA	False	NA	NA	NA	29236823	29414800	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
tx.6705	chr2	-	2373	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	-1	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	57.2362155894325	20	1	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	29677673	29666117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_29666388_29666585_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
tx.6706	chr2	-	2508	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	-4	1426	-4	0	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29677676	29666121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
tx.6707	chr2	-	2575	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	833	0	2	0	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29677681	29666121	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
tx.6708	chr2	-	1044	7	ISM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	838	2301	-4	183	5prime_fragment	FALSE	canonical	3	126	junction_1	24.0791518861349	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAGAAACAGAGGC	NA	False	NA	NA	False	NA	NA	NA	29677676	29668422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
tx.6709	chr2	+	1261	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	-5	735	-5	22	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTCCCTTTGCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	29678265	29687020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
tx.671	chr1	-	769	7	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	4	43669	4	5347	5prime_fragment	FALSE	canonical	3	480	junction_2	118.928082843746	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACAAAAGAAAAACAGAG	NA	False	NA	NA	False	NA	NA	NA	180971765	180958371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
tx.6710	chr2	+	1214	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	42	940	-11	-2	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	285	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	NA	False	NA	NA	NA	29717395	29734074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
tx.6711	chr2	+	2271	17	NIC	ENSMUSG00000026790.20	novel	2305	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	172.1394783308	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7203	False	NA	NA	False	NA	NA	NA	29779806	29812551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
tx.6712	chr2	+	434	2	ISM	ENSMUSG00000026790.20	ENSMUST00000153216.8	828	5	-45	9016	-5	-100	5prime_fragment	FALSE	canonical	3	1240	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAAGCATGAGAGAG	7188	False	NA	NA	False	NA	NA	NA	29779791	29782489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_29779934_29782197
tx.6713	chr2	+	3829	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	6	-9	3	8	multi-exon	FALSE	canonical	3	577	junction_4	191.01803579767	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGATTTCCCTTATCC	7209	False	NA	NA	False	NA	NA	NA	29779812	29821766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
tx.6714	chr2	+	2320	17	FSM	ENSMUSG00000026790.20	ENSMUST00000113755.8	2305	17	-15	0	5	0	multi-exon	FALSE	canonical	3	577	junction_4	168.994082736645	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7211	False	NA	NA	False	NA	NA	NA	29779814	29812551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
tx.6715	chr2	+	2097	16	NIC	ENSMUSG00000026790.20	novel	2364	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	278.954476572791	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7223	False	NA	NA	False	NA	NA	NA	29779826	29812551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
tx.6716	chr2	+	855	3	FSM	ENSMUSG00000019715.15	ENSMUST00000154490.8	860	3	7	-2	7	2	multi-exon	FALSE	canonical	3	530	junction_2	57.5	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATAGGAAGACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29825446	29828969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_29825611_29826021_29826250_29828506
tx.6717	chr2	+	2850	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	11	-953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	136.66595121764	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCCTGATATGTGGT	NA	False	NA	NA	False	NA	NA	NA	29825450	29849430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830198_29832612_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
tx.6718	chr2	+	3074	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	7	949	5	-949	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATATGTGGTTACC	NA	False	NA	NA	False	NA	NA	NA	29825444	29849434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
tx.6719	chr2	-	1809	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	0	5	0	-5	multi-exon	FALSE	canonical	3	156	junction_3	11.9973955507018	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACCTGAGAGCCCCAAG	NA	False	NA	NA	False	NA	NA	NA	29938893	29921562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
tx.672	chr1	-	1026	6	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	17	47320	17	1696	5prime_fragment	FALSE	canonical	3	480	junction_1	120.247078966601	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTATAGAGTAGAT	NA	False	NA	NA	False	NA	NA	NA	180971752	180962022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
tx.6720	chr2	+	1796	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	246	782	246	366	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	3630	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGATGCTTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	29952110	29961807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
tx.6721	chr2	+	1738	2	ISM	ENSMUSG00000054766.14	ENSMUST00000147590.2	844	3	331	-1140	331	-8	3prime_fragment	FALSE	canonical	3	15823	junction_1	0	248	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	-12	True	NA	NA	NA	29960512	29962581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_29960600_29960930
tx.6722	chr2	+	3031	22	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-5	1	combination_of_known_junctions	TRUE	canonical	3	77	junction_7	19.7860437769826	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1313	False	NA	NA	False	NA	NA	NA	29967690	29981035	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
tx.6723	chr2	-	1141	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	24	0	-8	0	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	329	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	29983636	29980955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
tx.6724	chr2	+	3563	12	FSM	ENSMUSG00000039678.13	ENSMUST00000044556.12	3595	12	26	6	0	-6	multi-exon	FALSE	canonical	1	2	junction_7	5.33195574495097	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCGTGTCGGTGCTGTG	2723	False	NA	NA	False	NA	NA	NA	30023783	30042019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711
tx.6725	chr2	-	2029	11	FSM	ENSMUSG00000039660.17	ENSMUST00000144093.8	2010	11	8	-27	-1	7	multi-exon	FALSE	canonical	3	299	junction_5	40.8044115262063	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGCTCACGTGACTGTA	NA	False	NA	NA	False	NA	NA	NA	30068463	30063457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067978_30068401
tx.6726	chr2	-	1825	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	-1	-19	-1	1	multi-exon	FALSE	canonical	3	299	junction_5	38.9436974393538	346	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCACCTATGCTCACGTG	NA	False	NA	NA	False	NA	NA	NA	30068463	30063463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
tx.6727	chr2	-	1866	13	FSM	ENSMUSG00000039648.15	ENSMUST00000044038.10	1876	13	10	0	10	0	multi-exon	FALSE	canonical	3	91	junction_12	20.7811011899434	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTTCTCTCTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	30095849	30075135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
tx.6728	chr2	+	1309	11	ISM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	88	0	-10	0	3prime_fragment	FALSE	canonical	2	39	junction_2	15.9185426468631	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATGTACGGGTACTT	10005	False	NA	NA	False	NA	NA	NA	30156820	30172160	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
tx.6729	chr2	+	561	7	FSM	ENSMUSG00000052533.15	ENSMUST00000113634.3	534	7	-26	-1	4	0	multi-exon	FALSE	canonical	3	62	junction_6	456.698539033743	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGTTTCTTGTGTATA	4852	False	NA	NA	False	NA	NA	NA	30176412	30193822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30193671
tx.673	chr1	-	867	2	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	37	54512	37	-5496	5prime_fragment	FALSE	canonical	3	758	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTCTTTTTTAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	180971732	180969214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_180969965_180971615
tx.6730	chr2	-	1764	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	46	0	-5	0	multi-exon	FALSE	canonical	3	213	junction_5	55.8	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	NA	False	NA	NA	NA	30249282	30234820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.6731	chr2	-	1701	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	-5	-2	-5	0	multi-exon	FALSE	canonical	3	12	junction_5	106.475639131188	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	NA	False	NA	NA	NA	30249282	30234820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
tx.6732	chr2	+	3369	16	FSM	ENSMUSG00000026858.19	ENSMUST00000077977.14	3381	16	10	2	-2	0	multi-exon	TRUE	canonical	3	32	junction_1	8.28385310240484	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	NA	False	NA	NA	NA	30254254	30275531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
tx.6733	chr2	+	2087	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	162	2	0	0	multi-exon	FALSE	canonical	3	287	junction_6	27.7995742149158	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	NA	False	NA	NA	NA	30282427	30290539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
tx.6734	chr2	+	2567	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	19	0	19	0	multi-exon	TRUE	canonical	3	440	junction_4	51.3501655905104	253	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	NA	False	NA	NA	NA	30306069	30337817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
tx.6735	chr2	+	1197	4	FSM	ENSMUSG00000026857.10	ENSMUST00000138889.8	1192	4	0	-5	0	5	multi-exon	FALSE	canonical	3	90	junction_2	216.499422632025	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAGGCAGTCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	30697952	30713034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_30698096_30709640_30709781_30710460_30710714_30712373
tx.6736	chr2	+	1255	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	123	9	7	7	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	255	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGCAGTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	30697960	30713036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
tx.6737	chr2	-	2109	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	2038	0	-4	0	multi-exon	FALSE	canonical	3	80	junction_2	13.3356664625357	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTCTTTGTATGACA	1720	False	NA	NA	False	NA	NA	NA	30718307	30713108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
tx.6738	chr2	-	1305	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	33	2309	33	502	multi-exon	FALSE	canonical	3	78	junction_1	10.5	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGGTGTCTAAGACCCA	8444	False	NA	NA	False	NA	NA	NA	30793276	30781791	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30782839_30790878_30790962_30793101
tx.6739	chr2	+	3025	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	14	0	-6	0	multi-exon	FALSE	canonical	1	21	junction_2	34.4990941910074	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	30842984	30849027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
tx.674	chr1	+	664	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	18	2586	18	27	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	497	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAACTCCAGCAAATG	NA	False	NA	NA	False	NA	NA	NA	180978513	180993973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
tx.6740	chr2	-	1372	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	29	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_3	220.841996685413	408	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	30857916	30850638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
tx.6741	chr2	-	1029	6	ISM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	2996	659	1561	-659	3prime_fragment	FALSE	canonical	3	354	junction_3	8.40476055578028	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	NA	NA	NA	30868957	30862847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906
tx.6742	chr2	-	1301	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	24	659	24	-659	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	289	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	NA	NA	NA	30871929	30862847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
tx.6743	chr2	+	1678	4	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	-610	-939	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	12.5521135891752	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTACTGTGACACTG	7590	False	NA	NA	False	NA	NA	NA	30909220	30912655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_30909404_30909796_30909900_30910840_30910913_30911335
tx.6744	chr2	-	1985	9	FSM	ENSMUSG00000075415.14	ENSMUST00000113552.9	1910	9	-69	-6	0	6	multi-exon	FALSE	canonical	3	133	junction_4	13.559475469206	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTCTTCTTGTTTCT	4768	False	NA	NA	False	NA	NA	NA	31032020	30943240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
tx.6745	chr2	-	527	2	FSM	ENSMUSG00000087269.2	ENSMUST00000133550.2	920	2	-15	408	-15	-408	multi-exon	FALSE	canonical	3	14	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTATGTTGTTTG	8871	False	NA	NA	False	NA	NA	NA	31042318	31041060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_31041263_31041993
tx.6746	chr2	+	1963	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	7	4164	7	45	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGCCTGGGTCTGTGC	NA	False	NA	NA	False	NA	NA	NA	31042334	31104623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
tx.6747	chr2	+	1708	17	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	14801	4164	-5150	45	3prime_fragment	FALSE	canonical	1	139	junction_13	90.1601873057061	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGCCTGGGTCTGTGC	NA	False	NA	NA	False	NA	NA	NA	31057128	31104623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
tx.6748	chr2	+	1613	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	81	2	81	-2	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	2628	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	31360299	31410682	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
tx.6749	chr2	+	3136	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	126	6	-14	0	multi-exon	TRUE	canonical	3	465	junction_18	67.3624112131124	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	619	False	NA	NA	False	NA	NA	NA	31462788	31507532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
tx.675	chr1	-	2555	6	ISM	ENSMUSG00000038733.15	ENSMUST00000036329.12	2640	14	25423	-1223	-1607	1223	3prime_fragment	FALSE	canonical	3	146	junction_4	6.30555310817378	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTAAGTGGCAACTCC	3950	False	NA	NA	False	NA	NA	NA	181013568	181003438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512
tx.6750	chr2	+	3209	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-26	0	intron_retention	FALSE	canonical	3	154	junction_18	127.170586318894	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	607	False	NA	NA	False	NA	NA	NA	31462776	31507532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
tx.6751	chr2	+	1679	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	8	-1	4	1	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	330	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGAGTCTCACCGCGTG	NA	False	NA	NA	False	NA	NA	NA	31560734	31571362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
tx.6752	chr2	+	1409	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	105	1603	-30	501	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTCCATGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	31840255	31861851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
tx.6753	chr2	+	955	7	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	4	69145	4	3270	5prime_fragment	FALSE	canonical	3	103	junction_4	13.4039795085887	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATGTGAAAGATTAT	NA	False	NA	NA	False	NA	NA	NA	31864451	31873238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134
tx.6754	chr2	-	3074	2	FSM	ENSMUSG00000050592.9	ENSMUST00000130178.2	525	2	2	-2551	2	-2	multi-exon	TRUE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTTGGCTCTGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	31969362	31956880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_31959786_31969193
tx.6755	chr2	+	2868	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	50	0	-3	0	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	NA	False	NA	NA	NA	32126651	32145017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
tx.6756	chr2	-	1677	6	ISM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	497	0	-18	0	3prime_fragment	FALSE	canonical	3	135	junction_2	17.4539393834171	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTCCTGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	32149674	32145013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591
tx.6757	chr2	-	1925	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	80	0	-18	0	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTCCTGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	32150091	32145013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
tx.6758	chr2	-	733	5	FSM	ENSMUSG00000044627.12	ENSMUST00000183946.8	768	5	35	0	-2	0	multi-exon	FALSE	canonical	3	3309	junction_1	124.51380445557	2010	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	32178045	32168827	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
tx.6759	chr2	+	672	4	ISM	ENSMUSG00000039205.17	ENSMUST00000125818.2	996	7	795	1927	795	0	internal_fragment	FALSE	canonical	3	84	junction_3	4.78423336480244	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	NA	False	NA	NA	NA	32266295	32268311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_32266440_32267304_32267375_32267520_32267643_32267975
tx.676	chr1	+	591	2	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGCAGTTGAACCTGA	NA	False	NA	NA	False	NA	NA	NA	181061431	181062292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_+_181061702_181061971
tx.6760	chr2	-	614	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	59	7	-17	-7	multi-exon	FALSE	canonical	3	268	junction_1	0	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCCCCTTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	32271891	32269119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_32269546_32271703
tx.6761	chr2	+	852	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	9	8	0	-8	multi-exon	FALSE	canonical	3	274	junction_1	58.5965490072202	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4782	False	NA	NA	False	NA	NA	NA	32460878	32463583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
tx.6762	chr2	+	2128	2	FSM	ENSMUSG00000026810.13	ENSMUST00000150419.2	851	2	-1162	-115	18	-8	multi-exon	FALSE	canonical	3	393	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4800	False	NA	NA	False	NA	NA	NA	32460896	32463583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32462412_32462970
tx.6763	chr2	+	1125	3	FSM	ENSMUSG00000026810.13	ENSMUST00000128039.2	655	3	21	-491	21	-7	multi-exon	FALSE	canonical	3	393	junction_2	5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTCTCTGCCATCCT	4803	False	NA	NA	False	NA	NA	NA	32460899	32463584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32461308_32462308_32462412_32462970
tx.6764	chr2	+	1674	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-42	1994	-42	3	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCTGTGGTAACGG	NA	False	NA	NA	False	NA	NA	NA	32477064	32487716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
tx.6765	chr2	+	1988	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	2991	-4	38	0	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	NA	False	NA	NA	NA	32518439	32525070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
tx.6766	chr2	+	2060	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	-20	-6	-20	0	multi-exon	FALSE	canonical	3	94	junction_1	85.0895998345274	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	NA	False	NA	NA	NA	32519495	32525070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
tx.6767	chr2	+	1524	2	ISM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	3876	-6	3859	0	3prime_fragment	FALSE	canonical	3	270	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	NA	False	NA	NA	NA	32523391	32525070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_32523498_32523652
tx.6768	chr2	+	2934	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	-48	536	-48	4	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	507	False	NA	NA	False	NA	NA	NA	32536558	32572134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
tx.6769	chr2	-	2246	15	FSM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	27	0	-23	0	multi-exon	FALSE	canonical	3	280	junction_8	41.2442327446381	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTATTCTCCTAGCTCCC	NA	False	NA	NA	False	NA	NA	NA	32584170	32572620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
tx.677	chr1	-	3515	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	15	-20	-3	20	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	181669929	181642879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
tx.6770	chr2	-	1487	6	ISM	ENSMUSG00000009555.17	ENSMUST00000120105.8	1565	7	181	-6	167	0	3prime_fragment	FALSE	canonical	3	1063	junction_2	94.525340517768	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	32602098	32597449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042
tx.6771	chr2	-	1661	7	FSM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	72	0	45	0	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	32602724	32597449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
tx.6772	chr2	+	1516	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	20	0	-1	0	multi-exon	FALSE	canonical	3	200	junction_1	20.9105236663265	119	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	609	False	NA	NA	False	NA	NA	NA	32647265	32652256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
tx.6773	chr2	+	1430	5	FSM	ENSMUSG00000009563.17	ENSMUST00000156617.8	915	5	-1	-514	-1	0	multi-exon	FALSE	canonical	3	24	junction_1	95.4214336509361	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	609	False	NA	NA	False	NA	NA	NA	32647265	32652256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32647463_32648768_32648949_32649538_32649715_32650600_32650729_32651507
tx.6774	chr2	+	965	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	-13	0	-13	0	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGCTTCCTGTGGGGT	8178	False	NA	NA	False	NA	NA	NA	32665784	32667609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
tx.6775	chr2	+	3649	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	65	0	65	0	multi-exon	TRUE	canonical	3	292	junction_12	30.0169577319103	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	8922	False	NA	NA	False	NA	NA	NA	32766190	32815266	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
tx.6776	chr2	+	667	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	124	451	-37	0	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	1605	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5765	False	NA	NA	False	NA	NA	NA	32851694	32854057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
tx.6777	chr2	+	757	7	FSM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	-26	-2	-6	0	multi-exon	FALSE	canonical	3	310	junction_1	2477.85254246943	687	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5796	False	NA	NA	False	NA	NA	NA	32851725	32854057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
tx.6778	chr2	-	2100	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	17	-9	3	9	multi-exon	FALSE	canonical	3	167	junction_4	8.32666399786453	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGCCAGAAGTCTTTTG	3967	False	NA	NA	False	NA	NA	NA	32872077	32862992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
tx.6779	chr2	-	1338	8	ISM	ENSMUSG00000038860.16	ENSMUST00000049618.9	3678	28	82480	-2	4442	2	3prime_fragment	FALSE	canonical	3	73	junction_5	9.88298888938741	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCAACCCTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	32893898	32876383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795
tx.678	chr1	-	3001	11	ISM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	10168	-14	-3057	14	3prime_fragment	FALSE	canonical	3	1956	junction_6	150.911099658044	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCATTTCTTTGCCACAG	NA	False	NA	NA	False	NA	NA	NA	181659776	181642885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713
tx.6780	chr2	-	1390	15	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-52	-3311	combination_of_known_junctions	FALSE	canonical	2	2	junction_14	31.7055972654543	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTCTATACTCTCCC	NA	False	NA	NA	False	NA	NA	NA	33021718	32912631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33021602
tx.6781	chr2	-	1765	3	FSM	ENSMUSG00000026788.14	ENSMUST00000126442.2	487	3	30	-1308	3	-58	multi-exon	FALSE	canonical	3	37	junction_2	3.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTCTGAAAGACCAGC	NA	False	NA	NA	False	NA	NA	NA	33358541	33343591	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_33345136_33354925_33355050_33358444
tx.6782	chr2	-	1782	3	FSM	ENSMUSG00000026788.14	ENSMUST00000028125.12	4998	3	-21	3237	6	-2	multi-exon	TRUE	canonical	3	44	junction_1	8.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATGTTCTCATCCTGG	NA	False	NA	NA	False	NA	NA	NA	33358565	33343535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_33345136_33354925_33354987_33358444
tx.6783	chr2	-	465	3	FSM	ENSMUSG00000038740.10	ENSMUST00000146892.2	520	3	66	-11	66	11	multi-exon	FALSE	canonical	3	76	junction_1	8	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTTTGATGAATTGGG	4279	False	NA	NA	False	NA	NA	NA	33777428	33763614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_33763860_33764349_33764473_33777331
tx.6784	chr2	-	1670	3	NNC	ENSMUSG00000087461.3	novel	2668	4	NA	NA	80961	-903	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	1	15	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTTTACCCTCAAGA	NA	False	NA	NA	False	NA	NA	NA	33916780	33909203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_33910509_33915810_33915970_33916574
tx.6785	chr2	-	2755	9	FSM	ENSMUSG00000038718.16	ENSMUST00000040638.15	2587	9	98	-266	-26	0	multi-exon	FALSE	canonical	3	23	junction_3	7.22733526273688	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATGTGTGTCTCTGT	930	False	NA	NA	False	NA	NA	NA	34261958	34061468	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
tx.6786	chr2	+	3428	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-325	8	-4	-8	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACCCTCTTTTGTATA	NA	False	NA	NA	False	NA	NA	NA	34296869	34514953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
tx.6787	chr2	+	2467	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	122	1083	-3	-67	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	501	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTGTGAAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	34662103	34666476	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
tx.6788	chr2	+	2552	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-3	64	-3	-64	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	233	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTGAAAAGTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	34662103	34666479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
tx.6789	chr2	-	1148	7	ISM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	2292	-20	-2131	0	3prime_fragment	FALSE	canonical	3	358	junction_4	38.762811502206	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	5113	False	NA	NA	False	NA	NA	NA	34687448	34669228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386
tx.679	chr1	-	1627	3	ISM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	15	19583	-3	1140	5prime_fragment	FALSE	canonical	3	2209	junction_1	121	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCATTTGAAAACAGCTAC	NA	False	NA	NA	False	NA	NA	NA	181669929	181662482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_181663854_181665942_181666122_181669852
tx.6790	chr2	-	1464	8	FSM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	-13	-20	13	0	multi-exon	FALSE	canonical	3	85	junction_7	117.809081109381	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2808	False	NA	NA	False	NA	NA	NA	34689753	34669228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
tx.6791	chr2	-	1180	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	127	1661	-31	0	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2764	False	NA	NA	False	NA	NA	NA	34689797	34669228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
tx.6792	chr2	-	1215	4	ISM	ENSMUSG00000035949.16	ENSMUST00000113078.8	1872	6	12064	-161	-2454	1	3prime_fragment	FALSE	canonical	3	277	junction_3	19.5106808355492	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGAGTCTGCTGGTTGA	NA	False	NA	43	True	NA	NA	NA	34701129	34695188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994
tx.6793	chr2	-	2501	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	102	-673	-2	673	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGTGACAGTGAAGCG	9222	False	NA	NA	False	NA	NA	NA	34716221	34701177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
tx.6794	chr2	-	2009	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	23	2365	-6	3	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTTGGTATTCCGGCT	NA	False	NA	NA	False	NA	NA	NA	34760951	34742110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
tx.6795	chr2	-	1863	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	3	104	junction_8	158.265945089271	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	NA	False	NA	NA	NA	34760951	34742111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34760761
tx.6796	chr2	-	2991	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	85	5	-53	-5	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACATAGTTGCATTATT	9637	False	NA	NA	False	NA	NA	NA	35091047	35070221	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
tx.6797	chr2	-	3064	8	NIC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-10	-10	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	365.068235165059	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTGAACATAGTTGCA	9680	False	NA	NA	False	NA	NA	NA	35091004	35070226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_35072581_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
tx.6798	chr2	-	2821	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	-33	-1	-33	1	multi-exon	FALSE	canonical	3	37	junction_2	5.5876848714134	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGAGTCTTGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	35227021	35203996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
tx.6799	chr2	-	793	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	68	0	68	0	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	808	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	False	NA	NA	False	NA	NA	NA	35939350	35926337	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
tx.68	chr1	+	3303	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-24	0	-8	0	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	34889048	34918661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
tx.680	chr1	-	3150	2	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCTTAAACGAGTATTT	6933	False	NA	NA	False	NA	NA	NA	181858729	181853428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_181856457_181858607
tx.6800	chr2	-	2455	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	162	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	140	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	NA	False	NA	NA	NA	36026623	36006090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
tx.6801	chr2	+	1315	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	253	1055	8	-1055	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATAGAGTGGTTTGGA	NA	False	NA	NA	False	NA	NA	NA	36026653	36079604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
tx.6802	chr2	-	2455	2	ISM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	3559	-8	3416	8	3prime_fragment	FALSE	canonical	3	157	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGATATTTGAATTCCT	NA	False	NA	NA	False	NA	NA	NA	37245785	37240077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_37242395_37245647
tx.6803	chr2	-	2805	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	52	1	-27	-1	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTGTATATTAGATATT	NA	False	NA	NA	False	NA	NA	NA	37249292	37240086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
tx.6804	chr2	-	547	2	FSM	ENSMUSG00000050714.10	ENSMUST00000067043.5	5267	2	4	4716	3	1595	multi-exon	FALSE	canonical	3	22	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCTCATAGATGATGTT	NA	False	NA	NA	False	NA	NA	NA	37333129	37326895	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_37327012_37332698
tx.6805	chr2	+	1570	10	ISM	ENSMUSG00000035437.16	ENSMUST00000133434.8	1594	11	17	3510	0	-1867	5prime_fragment	FALSE	canonical	3	116	junction_1	50.2610469400128	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTCACCTGGGTGCCGA	1556	False	NA	NA	False	NA	NA	NA	37333307	37382091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921
tx.6806	chr2	+	1603	10	ISM	ENSMUSG00000035437.16	ENSMUST00000066055.10	4247	19	-137	52883	-137	-1867	5prime_fragment	FALSE	canonical	3	120	junction_1	49.1884760166394	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTCACCTGGGTGCCGA	NA	False	NA	NA	False	NA	NA	NA	37342119	37382091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921
tx.6807	chr2	-	1071	3	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	56554	13288	3335	0	3prime_fragment	FALSE	canonical	3	769	junction_2	23.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTTCTTGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	37480743	37473167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_37474119_37476521_37476567_37480668
tx.6808	chr2	-	1249	4	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	50453	13288	-2766	0	3prime_fragment	FALSE	canonical	3	743	junction_3	30.2103734943259	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTTCTTGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	37486844	37473167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715
tx.6809	chr2	+	2258	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	47	8033	22	807	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGAGGAAACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	38401701	38476585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
tx.681	chr1	+	1006	2	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGATCATTTCCTGAAG	2267	False	NA	NA	False	NA	NA	NA	181856039	181857427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_+_181856461_181856842
tx.6810	chr2	+	2269	10	FSM	ENSMUSG00000026749.12	ENSMUST00000112895.8	1513	10	64	-820	64	820	multi-exon	FALSE	canonical	1	1	junction_1	94.3328752769929	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGAATTTTGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	38401889	38476598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_38401992_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
tx.6811	chr2	+	1867	6	ISM	ENSMUSG00000026749.12	ENSMUST00000112895.8	1513	10	49031	-807	46219	807	3prime_fragment	FALSE	canonical	3	288	junction_2	8.50881895447306	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGAGGAAACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	38450856	38476585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
tx.6812	chr2	-	994	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	166	0	-1	0	multi-exon	FALSE	canonical	3	1531	junction_5	118.933011500129	1376	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2379	False	NA	NA	False	NA	NA	NA	38533933	38478047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
tx.6813	chr2	+	1439	4	NNC	ENSMUSG00000083722.3	novel	2918	21	NA	NA	-26	-3327	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	1.69967317119759	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTCCCCATCTACCAT	NA	False	NA	NA	False	NA	NA	NA	38559402	38563237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_38559477_38560826_38560923_38561172_38561237_38562032
tx.6814	chr2	-	479	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	466	1	-36	-1	multi-exon	FALSE	canonical	3	27807	junction_3	5721.16085733967	1147	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	NA	False	NA	NA	NA	38895170	38891592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
tx.6815	chr2	+	1040	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	16	201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	531	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGGTGTGTTCTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	38898103	38905606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_38898359_38903128_38903200_38903734_38903912_38905069
tx.6816	chr2	-	1003	4	ISM	ENSMUSG00000026754.17	ENSMUST00000136261.2	1494	9	-83	8532	-27	-8532	5prime_fragment	FALSE	canonical	3	34	junction_3	10.6770782520313	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAGTTTGAAGACTTTT	NA	False	NA	NA	False	NA	NA	NA	38955580	38945615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_38946163_38953253_38953517_38954686_38954736_38955436
tx.6817	chr2	-	1571	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	101	2443	-30	-20	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	127	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCCTTGTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	39116362	39086808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
tx.6818	chr2	+	393	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1267	330	multi-exon	TRUE	canonical	0	0	junction_1	0	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATTGAAGAAGATCG	NA	False	NA	NA	False	NA	NA	NA	40447030	40447458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr2_+_40447307_40447341
tx.6819	chr2	+	536	3	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	1.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAGATAGAGCATGAAGA	NA	False	NA	NA	False	NA	NA	NA	43085690	43086577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_43085874_43086137_43086229_43086315
tx.682	chr1	+	1314	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	39	14	8	-14	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	452	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAAGTTTTGGATTTCTT	NA	False	NA	NA	False	NA	NA	NA	181952353	181959958	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_181952541_181956248_181956318_181958900
tx.6820	chr2	+	445	2	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	84	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAGATAGAGCATGAAGA	NA	False	NA	NA	False	NA	NA	NA	43085690	43086577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_43085874_43086315
tx.6821	chr2	-	2508	11	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	4	-5	combination_of_known_junctions	TRUE	canonical	3	29	junction_10	9.30644937664198	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCATATTCATTTGCGTC	NA	False	NA	NA	False	NA	NA	NA	44817242	44454431	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817153
tx.6822	chr2	+	833	3	NIC	ENSMUSG00000086202.2	novel	635	4	NA	NA	-2	1	intron_retention	FALSE	canonical	3	17	junction_1	10	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTCTTTATATCAGAT	NA	False	NA	NA	False	NA	NA	NA	45586614	45588460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_45586642_45586810_45587155_45587998
tx.6823	chr2	-	1627	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	137	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	120.796175338176	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAAAGTGTATGTGGT	NA	False	NA	NA	False	NA	NA	NA	48839253	48795190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
tx.6824	chr2	-	1660	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	35	2371	0	121	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	230	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGATTTGATACTCTT	NA	False	NA	NA	False	NA	NA	NA	48839253	48795206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
tx.6825	chr2	+	717	3	ISM	ENSMUSG00000026764.16	ENSMUST00000146247.2	729	7	-226	19217	-226	-19217	5prime_fragment	FALSE	canonical	3	34	junction_1	0	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCCCAGCTCATTCCA	NA	False	NA	NA	False	NA	NA	NA	49590364	49601046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_49590618_49590968_49591118_49600731
tx.6826	chr2	-	1648	7	ISM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	27	0	-3	0	intron_retention	FALSE	canonical	3	533	junction_6	61.03664655125	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	NA	False	NA	NA	NA	50186702	50169892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263
tx.6827	chr2	-	1337	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	5	0	5	0	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	352	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	NA	False	NA	NA	NA	50186724	50169892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
tx.6828	chr2	-	1315	8	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	208.37515226541	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	NA	False	NA	NA	NA	50186737	50169892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186689
tx.6829	chr2	-	2826	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	2	0	1	0	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	134	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGATGTTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	51039121	51020449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
tx.683	chr1	-	1833	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	20	195	20	-195	multi-exon	FALSE	canonical	3	1138	junction_1	20.5	563	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCTTAGTGGAATTTCT	NA	False	NA	NA	False	NA	NA	NA	182110349	182103531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_182104459_182106540_182107284_182110186
tx.6830	chr2	-	2048	5	FSM	ENSMUSG00000036249.17	ENSMUST00000102767.8	2057	5	9	0	9	0	multi-exon	FALSE	canonical	3	26	junction_1	2.77263412660235	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGCTGCATCATTATT	NA	False	NA	NA	False	NA	NA	NA	51825010	51814459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824843
tx.6831	chr2	+	799	8	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	2	4280	at_least_one_novel_splicesite	TRUE	canonical	3	241	junction_1	114.273927963665	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCCTTTGTTTGTCAA	NA	False	NA	NA	False	NA	NA	NA	51962845	51971297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237
tx.6832	chr2	-	3544	8	ISM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	27215	537	27171	-537	3prime_fragment	FALSE	canonical	3	181	junction_4	19.7535840199355	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAAATGTGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	52604997	52582212	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829
tx.6833	chr2	-	3022	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	0	1695	0	-1695	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATCTTATCGTTTATC	NA	False	NA	NA	False	NA	NA	NA	52632212	52583370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
tx.6834	chr2	-	3870	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	16	95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	170.328435798802	10	2	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGTAGCTACAGTACT	NA	False	NA	NA	False	NA	NA	NA	53081280	53028154	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
tx.6835	chr2	-	3715	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	13	2	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTCTTTATTTCTACA	NA	False	NA	NA	False	NA	NA	NA	53081231	53028248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
tx.6836	chr2	-	3863	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	14	2	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTCTTTATTTCTACA	NA	False	NA	NA	False	NA	NA	NA	53081253	53028248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
tx.6837	chr2	+	2549	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-4	3	-4	-3	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	401	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTGTGTGTAATGGCA	NA	False	NA	NA	False	NA	NA	NA	53082095	53109229	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
tx.6838	chr2	-	1003	2	NNC	ENSMUSG00000054181.12	novel	1541	2	NA	NA	-169	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTGGAGATAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	57128689	57126237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_57126985_57128433
tx.6839	chr2	+	2744	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	-43	3044	0	-178	multi-exon	TRUE	canonical	3	41	junction_1	44.6148447828747	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGTGTGTTTGCCAA	NA	False	NA	NA	False	NA	NA	NA	57127646	57257687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
tx.684	chr1	-	1277	8	NIC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	33	8	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	31.0430905257153	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCTTGCTGTCTGAC	NA	False	NA	NA	False	NA	NA	NA	183003016	182877748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182984515_182984604_183002886
tx.6840	chr2	+	2457	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	56	3107	56	-241	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAATCAAAGAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	57128449	57257624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
tx.6841	chr2	-	1741	3	FSM	ENSMUSG00000087455.8	ENSMUST00000155111.2	463	3	21	-1299	21	8	multi-exon	FALSE	canonical	0	0	junction_1	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGATTGCCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	59217794	59212837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_59214299_59215031_59215155_59217637
tx.6842	chr2	-	2017	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	17.6150503831241	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	59712950	59682707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
tx.6843	chr2	-	2057	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	18.5580171354593	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	59712910	59682707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
tx.6844	chr2	-	2057	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	18.0765040867973	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	59712950	59682707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712821
tx.6845	chr2	-	1518	2	ISM	ENSMUSG00000026987.17	ENSMUST00000153711.2	1813	3	-46	71021	-46	1260	5prime_fragment	FALSE	canonical	3	21	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATTACAATTGCCCTCC	NA	False	NA	NA	False	NA	NA	NA	59955982	59905913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_59907256_59955806
tx.6846	chr2	-	472	2	FSM	ENSMUSG00000026987.17	ENSMUST00000134908.2	406	2	-62	-4	-9	3	multi-exon	FALSE	canonical	3	22	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTGACTTCTGCTTT	9141	False	NA	NA	False	NA	NA	NA	60040154	60036933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_60037308_60040056
tx.6847	chr2	+	3534	9	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	6	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	119.982290359869	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGAACTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	60040236	60079550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60078233
tx.6848	chr2	+	3554	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	35	5	9	-5	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGAACTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	60040265	60079550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
tx.6849	chr2	+	3548	11	NIC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	166.388220736926	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTTTGAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	60040259	60079548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60077831_60077857_60078233
tx.685	chr1	-	1452	9	ISM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	-20	9925	-15	2	5prime_fragment	FALSE	canonical	3	56	junction_6	14.115040736746	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCTGCCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	183003069	182877754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
tx.6850	chr2	+	2760	11	NIC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	8	413	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	145.637769826374	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTTCCTCTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	60040264	60078730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60077831_60077857_60078233
tx.6851	chr2	+	2065	5	ISM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	45	13930	19	888	5prime_fragment	FALSE	canonical	3	331	junction_4	13.2853302555864	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCAAAAACCAAAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	60040275	60065625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242
tx.6852	chr2	+	3188	8	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	4954	-1250	-2380	-4	3prime_fragment	FALSE	canonical	3	327	junction_3	30.7591035139126	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTGAACTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	60060066	60079551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
tx.6853	chr2	+	2216	6	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	9860	-1333	-2125	79	3prime_fragment	FALSE	canonical	3	327	junction_1	33.2180673730426	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGGTTCTATTTTCTC	NA	False	NA	NA	False	NA	NA	NA	60064972	60079634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
tx.6854	chr2	-	1017	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	337	0	267	0	multi-exon	FALSE	canonical	3	68	junction_2	6.41872261435249	58	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	4269	False	NA	NA	False	NA	NA	NA	60114495	60082336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
tx.6855	chr2	-	2592	6	ISM	ENSMUSG00000026980.16	ENSMUST00000112533.8	6901	35	75025	-6	74953	6	3prime_fragment	FALSE	canonical	3	599	junction_2	32.307274722576	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCTCAGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	60138622	60122440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482
tx.6856	chr2	-	2143	6	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-69	62497	3	-62497	5prime_fragment	FALSE	canonical	3	533	junction_4	45.5174691739336	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGGAACAACGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	60213644	60186600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
tx.6857	chr2	+	533	4	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-27285	-5	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	58.0344725141876	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTGTGGTGGTATACC	2601	False	NA	NA	False	NA	NA	NA	60214583	60242918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_60214668_60241980_60242062_60242190_60242353_60242712
tx.6858	chr2	+	578	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	-17	5	-17	-5	multi-exon	FALSE	canonical	3	174	junction_2	3	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTGTGGTGGTATACC	9329	False	NA	NA	False	NA	NA	NA	60241851	60242918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_60242062_60242190_60242353_60242712
tx.6859	chr2	+	1913	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	64	62	5	19	multi-exon	FALSE	canonical	3	34	junction_2	9.53190132434987	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTGTTCTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	61423484	61484453	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
tx.686	chr1	-	3462	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-32	0	-32	0	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	NA	NA	NA	183078568	183057915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
tx.6860	chr2	+	1160	2	ISM	ENSMUSG00000064289.16	ENSMUST00000112501.9	2227	9	56769	56	6035	25	3prime_fragment	FALSE	canonical	3	47	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTTTGTTTCTGAGAT	NA	False	NA	NA	False	NA	NA	NA	61480209	61484459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_61480633_61483722
tx.6861	chr2	+	1492	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	49	0	1	0	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	1682	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8596	False	NA	NA	False	NA	NA	NA	61542086	61630720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
tx.6862	chr2	-	4551	25	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	783	420	411	-420	3prime_fragment	FALSE	canonical	3	167	junction_12	33.8549807594425	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCATAGCACAAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	62241792	62160836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558
tx.6863	chr2	-	1880	9	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	55454	1561	930	-1561	3prime_fragment	FALSE	canonical	3	241	junction_6	20.4110111214511	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAATGGGTTATGTCTT	NA	False	NA	NA	False	NA	NA	NA	62187121	62161977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959
tx.6864	chr2	-	3374	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	335	1559	-37	-1559	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATGGGTTATGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	62242240	62161975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
tx.6865	chr2	+	1809	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	6	1515	6	-1515	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCAGAAATTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	62494634	62522938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
tx.6866	chr2	-	1689	6	ISM	ENSMUSG00000034848.18	ENSMUST00000125446.3	4061	28	-25	57092	0	-10619	5prime_fragment	FALSE	canonical	2	9	junction_3	7.79743547584717	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTAATAGCATCATT	NA	False	NA	NA	False	NA	NA	NA	66086961	66072078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
tx.6867	chr2	-	1360	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	648	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	69036546	69024238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
tx.6868	chr2	+	1452	12	FSM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	16	0	-6	0	multi-exon	FALSE	canonical	3	71	junction_4	9.81144550053239	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTTTGAAAGTATTA	NA	False	NA	NA	False	NA	NA	NA	69477567	69497915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69484589_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
tx.6869	chr2	+	2812	15	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	5	1064	combination_of_known_junctions	TRUE	canonical	3	54	junction_1	118.295461986209	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTTGGTGTAATACT	NA	False	NA	NA	False	NA	NA	NA	69553153	69580956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
tx.687	chr1	+	2399	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	15	1865	15	2	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGATGGTTGTTACACA	NA	False	NA	NA	False	NA	NA	NA	183078607	183104466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
tx.6870	chr2	+	2716	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	14	3397	14	1067	multi-exon	FALSE	canonical	3	282	junction_1	41.7748260879032	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGTAATACTGTG	NA	False	NA	NA	False	NA	NA	NA	69553162	69580959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
tx.6871	chr2	+	2157	4	NIC	ENSMUSG00000027088.11	novel	2194	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	41.6839963961657	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	69619994	69627567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_69620249_69620629_69620666_69622716_69622836_69625819
tx.6872	chr2	+	2191	4	FSM	ENSMUSG00000027088.11	ENSMUST00000112266.8	2194	4	3	0	3	0	multi-exon	FALSE	canonical	3	18	junction_1	37.7918274528002	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	69619996	69627567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_69620249_69620629_69620666_69622680_69622836_69625819
tx.6873	chr2	+	2239	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	21	0	-3	0	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	69620000	69627567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
tx.6874	chr2	+	1696	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	29	276	29	0	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	1593	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	69691934	69701854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
tx.6875	chr2	-	960	7	FSM	ENSMUSG00000051730.16	ENSMUST00000060447.13	968	7	11	-3	0	3	multi-exon	FALSE	canonical	3	432	junction_3	75.5058864519111	299	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCTCTTTTCTTATG	6817	False	NA	NA	False	NA	NA	NA	69715948	69701538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
tx.6876	chr2	-	875	6	FSM	ENSMUSG00000051730.16	ENSMUST00000142127.8	851	6	-7	-17	0	1	multi-exon	FALSE	canonical	3	48	junction_3	209.013492387453	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATTTTCTCTTTTCTTA	6817	False	NA	NA	False	NA	NA	NA	69715948	69701540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
tx.6877	chr2	-	1560	4	FSM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	5	525	-2	-525	multi-exon	FALSE	canonical	3	529	junction_1	42.2926313518876	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGCATATTTGCTAG	6822	False	NA	NA	False	NA	NA	NA	69715943	69708616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_69709529_69711110_69711293_69711640_69711756_69715592
tx.6878	chr2	-	913	3	ISM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	-4	2763	-4	-2763	5prime_fragment	FALSE	canonical	3	609	junction_2	8.5	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGATTTTTCCTTGTGTT	6813	False	NA	NA	False	NA	NA	NA	69715952	69710854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_69711293_69711640_69711756_69715592
tx.6879	chr2	+	2223	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	-3	18	-3	0	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	NA	False	NA	NA	NA	70491916	70522069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
tx.688	chr1	-	3024	23	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_22	21.1026613025369	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	NA	False	NA	NA	NA	183126904	183107681	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
tx.6880	chr2	+	1210	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	-14	0	0	0	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGCCTCCCGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	70491919	70519704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
tx.6881	chr2	-	2892	10	ISM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	83497	0	-24007	0	3prime_fragment	TRUE	canonical	3	205	junction_9	22.1799598124963	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	NA	NA	NA	70572575	70542750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397
tx.6882	chr2	-	2677	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	311	1292	-20	442	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTTGTAATATGAAGGG	NA	False	NA	NA	False	NA	NA	NA	70655761	70544042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
tx.6883	chr2	-	2168	3	ISM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	329	55827	-2	-17240	5prime_fragment	FALSE	canonical	3	217	junction_2	11.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTCCATGGCTA	NA	False	NA	NA	False	NA	NA	NA	70655743	70598577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_70600420_70617220_70617340_70655536
tx.6884	chr2	-	2347	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	14.8332292963476	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	70885927	70794904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
tx.6885	chr2	-	2117	10	NIC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	29.4505234814822	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	70885925	70794904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812312_70823827_70823920_70848563_70848719_70885714
tx.6886	chr2	+	2638	9	ISM	ENSMUSG00000041966.19	ENSMUST00000102701.5	1703	13	-108	5184	0	2	5prime_fragment	FALSE	canonical	3	195	junction_1	19.2467529729043	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTGCATACTCTATATT	NA	False	NA	NA	False	NA	NA	NA	70886087	70913804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254
tx.6887	chr2	+	2316	14	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	0	360	combination_of_known_junctions	TRUE	canonical	3	27	junction_1	53.8095479968128	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTCTTATGCGGTCTTA	NA	False	NA	NA	False	NA	NA	NA	70886087	70920982	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
tx.6888	chr2	+	2010	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	3	-1462	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	52.7831528471898	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTTGTCCACCA	NA	False	NA	NA	False	NA	NA	NA	70886090	70924740	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924541
tx.6889	chr2	+	2484	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	9	5246	-5	334	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCAATTCTAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	70886096	70920956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
tx.689	chr1	+	1626	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	-4	762	-4	-762	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCAGCTGTGTCACTCG	NA	False	NA	NA	False	NA	NA	NA	183170320	183190258	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
tx.6890	chr2	+	1374	10	ISM	ENSMUSG00000041966.19	ENSMUST00000102701.5	1703	13	-88	4057	6	1129	5prime_fragment	FALSE	canonical	3	195	junction_1	18.2357673234921	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGACATTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	70886107	70914931	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768
tx.6891	chr2	+	2532	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	-59	-7	-7	0	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTTCACTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	71042042	71093642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
tx.6892	chr2	+	2488	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	138	5	0	0	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	252	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTTCACTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	71042315	71093642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
tx.6893	chr2	-	2762	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	418	at_least_one_novel_splicesite	TRUE	canonical	3	57	junction_15	22.4311291636323	12	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCATGGAGTTGGTTTCC	NA	False	NA	NA	False	NA	NA	NA	71164438	71104615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
tx.6894	chr2	-	647	5	NIC	ENSMUSG00000027010.17	novel	550	3	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	8.57321409974112	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCTCTAGAATTTCTA	NA	False	NA	NA	False	NA	NA	NA	71197899	71160083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_71160375_71163948_71164065_71174233_71174377_71196870_71196925_71197856
tx.6895	chr2	+	1493	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-24	107	-24	-107	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	2900	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCCCACTGCTTTCTT	5094	False	NA	NA	False	NA	NA	NA	71219579	71271859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
tx.6896	chr2	+	1374	10	ISM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	693	107	693	-107	3prime_fragment	FALSE	canonical	3	1873	junction_7	142.306398700519	2725	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCCCACTGCTTTCTT	5811	False	NA	NA	False	NA	NA	NA	71220296	71271859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
tx.6897	chr2	+	1265	10	FSM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	59	-3	2	0	multi-exon	TRUE	canonical	3	42	junction_6	11.0565326201412	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTCCAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	71283678	71355538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
tx.6898	chr2	+	657	3	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	9641	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_1	13	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCAAGACTCGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	71559401	71561310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_71559686_71560693_71560778_71561021
tx.6899	chr2	+	1242	4	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	59045	0	-3044	0	3prime_fragment	FALSE	canonical	3	515	junction_3	29.2612751298063	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTTTATAAACATGCAAG	NA	False	NA	NA	False	NA	NA	NA	71676328	71687115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_71676428_71676507_71676607_71679724_71679851_71686197
tx.69	chr1	+	2177	7	FSM	ENSMUSG00000037447.17	ENSMUST00000115032.8	4640	7	0	2463	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.46572158042361	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGGTGTACAGCACT	NA	False	NA	NA	False	NA	NA	NA	36346834	36359609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_36346918_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
tx.690	chr1	+	1490	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	0	-826	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	14.0996453856117	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTACAGTGTAGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	183170324	183190194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
tx.6900	chr2	+	1312	10	FSM	ENSMUSG00000004085.15	ENSMUST00000150126.8	1227	10	-40	-45	9	45	multi-exon	FALSE	canonical	3	24	junction_9	4.98887651569859	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGCCTTGCCATGTGT	3334	False	NA	NA	False	NA	NA	NA	72116080	72220228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813
tx.6901	chr2	+	2397	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	26	1	26	-1	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	408	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTTTATTTTTGTT	8595	False	NA	NA	False	NA	NA	NA	72306528	72317236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
tx.6902	chr2	-	2071	2	FSM	ENSMUSG00000027109.17	ENSMUST00000129565.2	645	2	351	-1777	351	-76	multi-exon	FALSE	canonical	3	451	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTATAGAGGTGCTGGCA	NA	False	NA	NA	False	NA	NA	NA	72771077	72766846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_72768727_72770886
tx.6903	chr2	+	1228	2	ISM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	29	65	29	5	intron_retention	FALSE	canonical	1	97	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGCAAGCTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	72809796	72818956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_72809940_72817871
tx.6904	chr2	+	467	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	46	70	-46	0	multi-exon	FALSE	canonical	1	97	junction_1	49.5	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCTCCTGCAAGCTTG	NA	False	NA	NA	False	NA	NA	NA	72809813	72818951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_72809940_72817871_72817977_72818715
tx.6905	chr2	-	1740	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	37	398	2	1	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	622	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGTTTGGGGAT	NA	False	NA	NA	False	NA	NA	NA	73044754	72923542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
tx.6906	chr2	-	984	8	FSM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	-79	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	132.211333609089	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTGTTTTGTTCAATG	NA	False	NA	NA	False	NA	NA	NA	73044756	72967870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_72968000_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
tx.6907	chr2	-	1918	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	-1	-759	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCTTAAGACTTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	73142912	73114207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
tx.6908	chr2	+	1092	5	ISM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	48	15347	-5	449	5prime_fragment	FALSE	canonical	3	52	junction_4	23.0475052879916	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTTGTTTGTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	73142992	73152815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328
tx.6909	chr2	+	3250	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	55	4	2	-4	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCATTTGATCTTTGA	NA	False	NA	NA	False	NA	NA	NA	73142999	73168158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
tx.691	chr1	-	965	7	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	4459	611	4149	-1	3prime_fragment	FALSE	canonical	3	760	junction_6	71.9760762722973	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCCGCTATTACGTTTT	NA	False	NA	NA	False	NA	NA	NA	184573619	184545875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450
tx.6910	chr2	+	1881	4	FSM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	5	11	0	-11	multi-exon	FALSE	canonical	3	91	junction_1	8.65383665716478	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTATTACACTGATTA	NA	False	NA	NA	False	NA	NA	NA	73143002	73151129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646
tx.6911	chr2	+	2572	4	ISM	ENSMUSG00000008226.15	ENSMUST00000123621.2	1239	5	2669	-1519	2669	0	3prime_fragment	FALSE	canonical	3	42	junction_1	5.35412613473634	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGATCTTTGATAAA	NA	False	NA	NA	False	NA	NA	NA	73152412	73168162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_73152539_73160106_73160270_73161326_73161502_73166054
tx.6912	chr2	+	2403	3	ISM	ENSMUSG00000008226.15	ENSMUST00000123621.2	1239	5	10402	-1515	10402	-4	3prime_fragment	FALSE	canonical	3	50	junction_1	2.5	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCATTTGATCTTTGA	NA	False	NA	NA	False	NA	NA	NA	73160145	73168158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_73160270_73161326_73161502_73166054
tx.6913	chr2	-	3336	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	269	1123	14	-694	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTATTTTTATAACT	NA	False	NA	NA	False	NA	NA	NA	73359809	73261076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
tx.6914	chr2	-	2122	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	252	1676	-27	0	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	73605438	73442679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
tx.6915	chr2	-	2057	12	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-40	0	intron_retention	FALSE	canonical	1	16	junction_6	88.3547507691073	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	73605451	73442679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
tx.6916	chr2	-	3845	12	FSM	ENSMUSG00000027104.19	ENSMUST00000112016.9	3943	12	89	9	0	2	multi-exon	FALSE	canonical	3	57	junction_5	77.3989343681314	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	73722894	73646861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
tx.6917	chr2	-	4117	13	FSM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	-89	9	3	2	multi-exon	FALSE	canonical	3	85	junction_9	68.6093510795398	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	73722969	73646861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
tx.6918	chr2	-	3845	12	NIC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	128.875813117169	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTATAATTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	73722931	73646864	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
tx.6919	chr2	-	688	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	26	0	-9	0	multi-exon	FALSE	canonical	3	2058	junction_4	989.165146727279	2056	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	NA	False	NA	NA	NA	73741644	73738790	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
tx.692	chr1	-	1086	8	FSM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	220	611	-90	-1	multi-exon	FALSE	canonical	3	760	junction_6	70.0437181264644	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCCGCTATTACGTTTT	NA	False	NA	NA	False	NA	NA	NA	184577858	184545875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
tx.6920	chr2	-	3195	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	74409292	74350677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
tx.6921	chr2	-	3136	12	FSM	ENSMUSG00000009207.16	ENSMUST00000134641.8	2120	12	-17	-999	0	0	multi-exon	FALSE	canonical	2	13	junction_8	78.2650719516906	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	74409292	74350677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
tx.6922	chr2	-	540	2	Genic_Genomic	ENSMUSG00000075279.6	novel	580	1	NA	NA	0	0	multi-exon	FALSE	canonical	2	50	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGACTGGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	74422253	74421673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr2_-_74421900_74421939
tx.6923	chr2	+	1244	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	14	1692	-13	235	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTCATTTACTTTGA	NA	False	NA	NA	False	NA	NA	NA	74656160	74707083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
tx.6924	chr2	+	1432	3	FSM	ENSMUSG00000027099.10	ENSMUST00000129284.2	728	3	-469	-235	-469	235	multi-exon	FALSE	canonical	3	805	junction_2	1.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTCATTTACTTTGA	835	False	NA	NA	False	NA	NA	NA	74698855	74707083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_74699774_74700751_74700829_74706646
tx.6925	chr2	-	854	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	-32	-72	-32	72	mono-exon	FALSE	NA	NA	NA	NA	NA	8	1	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTGTCAAATGGCAC	NA	False	NA	NA	False	NA	NA	NA	75022198	75021344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_75021300_75022200
tx.6926	chr2	-	486	2	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGGGTGTGTGTGTGTG	3875	False	NA	NA	False	NA	NA	NA	75463943	75457472	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_-_75457815_75463799
tx.6927	chr2	+	658	2	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGATGGTCGTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	75464361	75465116	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_75464502_75464598
tx.6928	chr2	+	2244	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2906	0	380	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGACTGGCTGGCATGC	7481	False	NA	NA	False	NA	NA	NA	75489610	75496845	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
tx.6929	chr2	+	1930	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-282	0	0	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	329	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	NA	NA	NA	75489610	75496465	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
tx.693	chr1	-	964	2	FSM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	159	1912	159	-1912	multi-exon	FALSE	canonical	3	22	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTATCTCCCCCATCT	NA	False	NA	NA	False	NA	NA	NA	184615256	184606034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_184606625_184614882
tx.6930	chr2	+	2188	9	ISM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	2518	-894	-710	612	3prime_fragment	FALSE	canonical	3	8907	junction_4	721.365502016835	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCGGGTGTGACAATTTGT	9993	False	NA	NA	False	NA	NA	NA	75492122	75497077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
tx.6931	chr2	+	1837	4	ISM	ENSMUSG00000059005.14	ENSMUST00000111961.8	1734	10	4365	-852	1156	852	3prime_fragment	FALSE	canonical	3	9771	junction_1	527.676879244191	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTCTTGTTGCTCTA	NA	False	NA	NA	False	NA	NA	NA	75493988	75497317	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_75494059_75495371_75495495_75495577_75495646_75495741
tx.6932	chr2	-	2376	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	99	0	-53	0	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTTTTTGAATTTA	NA	False	NA	NA	False	NA	NA	NA	75534886	75505856	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
tx.6933	chr2	-	1316	2	FSM	ENSMUSG00000015839.7	ENSMUST00000152371.2	1447	2	-20	151	-20	-151	multi-exon	FALSE	canonical	3	19	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTGTTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	75534853	75521546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_75522717_75534707
tx.6934	chr2	-	626	3	NIC	ENSMUSG00000056436.5	novel	655	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	94.5	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCGTTATGTTTATGA	NA	False	NA	NA	False	NA	NA	NA	76190794	76184285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_76184581_76186423_76186617_76190656
tx.6935	chr2	-	655	4	FSM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	45.146674542232	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCGTTATGTTTATGA	NA	False	NA	NA	False	NA	NA	NA	76190794	76184285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_76184581_76186423_76186617_76187916_76187946_76190656
tx.6936	chr2	+	1883	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	15	0	15	0	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	158	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGACTTATTTATATGAA	NA	False	NA	NA	False	NA	NA	NA	76200342	76214112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
tx.6937	chr2	+	506	4	ISM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	185287	551	23725	0	3prime_fragment	FALSE	canonical	3	41	junction_2	1.69967317119759	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTATAGCTACGCGT	NA	False	NA	NA	False	NA	NA	NA	76422188	76426389	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_76422273_76423683_76423811_76425107_76425231_76426217
tx.6938	chr2	-	1587	8	FSM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	-12	39	-12	-39	multi-exon	TRUE	canonical	3	32	junction_1	7.52953368748825	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTCTGCTCATTTTA	NA	False	NA	NA	False	NA	NA	NA	76478371	76460280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
tx.6939	chr2	-	828	6	ISM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	-15	6852	-15	45	5prime_fragment	FALSE	canonical	3	42	junction_4	3.65513337649941	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGATGTCCCTTCATT	NA	False	NA	NA	False	NA	NA	NA	76478374	76467093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
tx.694	chr1	-	3454	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	42	1975	42	-1132	multi-exon	TRUE	canonical	3	288	junction_20	32.2887284275964	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCTCTATGATATCTG	NA	False	NA	NA	False	NA	NA	NA	185061551	185018897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
tx.6940	chr2	-	884	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	-24	0	-9	0	multi-exon	FALSE	canonical	3	16	junction_2	10.2089285540757	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTTGCAAATCTGACT	NA	False	NA	NA	False	NA	NA	NA	76503438	76493387	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
tx.6941	chr2	+	435	3	ISM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	7536	9318	-7036	-5254	internal_fragment	FALSE	canonical	3	231	junction_1	20.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCGTGTGTATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	76513160	76517854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_76513230_76516962_76517100_76517625
tx.6942	chr2	-	2033	12	ISM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	13	39568	-4	-4592	5prime_fragment	TRUE	canonical	3	25	junction_4	5.66269509178089	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGCACCTTTTGTAG	NA	False	NA	NA	False	NA	NA	NA	77000948	76879906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
tx.6943	chr2	-	2146	10	ISM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	53252	6044	-13089	171	3prime_fragment	FALSE	canonical	3	90	junction_7	13.5464450258917	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTGAAGAATAATTTAG	NA	False	NA	NA	False	NA	NA	NA	77042860	77016727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703
tx.6944	chr2	-	2752	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-25	-7	-25	7	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTTGGTAGTTACGTC	NA	False	NA	NA	False	NA	NA	NA	77110961	77016891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
tx.6945	chr2	-	2660	2	Antisense	novelGene_ENSMUSG00000081611.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCGGTTGTTTGTTTGT	7346	False	NA	NA	False	NA	NA	NA	77139805	77114977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_-_77117450_77139617
tx.6946	chr2	-	1702	9	ISM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	29252	113	7427	0	3prime_fragment	TRUE	canonical	3	170	junction_1	25.2339057618911	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	77747445	77726109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399
tx.6947	chr2	+	1483	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	193	573	0	423	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGTAGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	78699583	78751064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
tx.6948	chr2	+	960	2	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	57	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATATTTTAAATGGGG	NA	False	NA	NA	False	NA	NA	NA	80026597	80042075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_80026685_80041202
tx.6949	chr2	+	3618	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	267	157	267	-157	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACACAATGGACTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	80146076	80184230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
tx.695	chr1	+	2212	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	5	-991	-3	-5	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTAATTGCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	185064373	185089969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
tx.6950	chr2	+	687	4	FSM	ENSMUSG00000027001.11	ENSMUST00000147290.8	1324	4	96	541	-30	365	multi-exon	FALSE	canonical	3	18	junction_1	41.0446910899164	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTTGTTATTTCAG	NA	False	NA	NA	False	NA	NA	NA	80447539	80461533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_80447629_80451537_80451585_80454551_80454705_80461135
tx.6951	chr2	+	992	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	173	467	-8	370	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTATTTCAGTATCT	NA	False	NA	NA	False	NA	NA	NA	80447561	80461538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
tx.6952	chr2	+	1548	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	15	-4	-1	0	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	324	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTGGAAGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	80469174	80489250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
tx.6953	chr2	+	2025	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	81	5	-21	-5	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	580	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACTATGGGCCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	83474859	83494961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
tx.6954	chr2	-	1338	9	NIC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_8	41.6863286941894	35	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGACTGTCCCCCTT	NA	False	NA	NA	False	NA	NA	NA	84307107	84263198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
tx.6955	chr2	-	1302	9	NIC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	40.1230529122598	66	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGACTGTCCCCCTT	NA	False	NA	NA	False	NA	NA	NA	84307121	84263198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
tx.6956	chr2	-	669	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	72	6	-1	0	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	1785	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGCAAGTTTAAATTT	368	False	NA	NA	False	NA	NA	NA	84501042	84499564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
tx.6957	chr2	-	2009	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-31	-1	31	0	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	766	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	5260	False	NA	NA	False	NA	NA	NA	84508431	84501659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
tx.6958	chr2	+	684	4	ISM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	12	1943	12	-1227	5prime_fragment	FALSE	canonical	3	447	junction_3	25.381533094402	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGGTAGGGG	3369	False	NA	NA	False	NA	NA	NA	84508757	84516616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534
tx.6959	chr2	+	2036	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	23	0	23	0	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	319	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTGGAGTCTTCCCT	3380	False	NA	NA	False	NA	NA	NA	84508768	84518559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
tx.696	chr1	+	2168	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	27	5	3	-5	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTAATTGCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	185064372	185089969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
tx.6960	chr2	-	2154	2	ISM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	24481	171	23987	-171	3prime_fragment	FALSE	canonical	3	304	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCCCCCTGACTTGTG	NA	False	NA	NA	False	NA	NA	NA	84521043	84518484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_84519789_84520193
tx.6961	chr2	-	1849	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	63	0	-11	0	multi-exon	FALSE	canonical	3	238	junction_1	30.5	276	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTATGATTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84557631	84553465	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_84554562_84555872_84556501_84557506
tx.6962	chr2	-	1805	7	ISM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	535	-24	259	24	3prime_fragment	FALSE	canonical	3	78	junction_3	14.4270194041905	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCCTCTGTGTACTAGTT	NA	False	NA	NA	False	NA	NA	NA	84605213	84595706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
tx.6963	chr2	+	1367	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	20	173	14	-173	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTCGTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	84629191	84640347	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
tx.6964	chr2	-	1008	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6392	0	6392	0	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	67	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	4161	False	NA	NA	False	NA	NA	NA	84646604	84641519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
tx.6965	chr2	-	900	5	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	5562	0	5562	0	3prime_fragment	FALSE	canonical	3	6	junction_4	55.2222781130949	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	3331	False	NA	NA	False	NA	NA	NA	84647434	84641519	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227_84646384_84647321
tx.6966	chr2	+	667	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	23	0	23	0	multi-exon	FALSE	canonical	3	373	junction_1	17.5	413	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	6440	False	NA	NA	False	NA	NA	NA	84657363	84660557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_84657492_84657942_84658058_84660133
tx.6967	chr2	+	2527	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	7	5	-2	0	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	NA	False	NA	NA	False	NA	NA	NA	84669758	84693925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
tx.6968	chr2	+	2351	15	NIC	ENSMUSG00000027075.17	novel	2539	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.8209880674936	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	NA	False	NA	NA	False	NA	NA	NA	84669758	84693925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
tx.6969	chr2	+	2463	13	NIC	ENSMUSG00000027074.15	novel	2621	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	9.67923034130297	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTCTACCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	84766922	84788853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_84766989_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
tx.697	chr1	+	3045	20	FSM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	13	2580	-1	-2580	multi-exon	FALSE	canonical	3	1945	junction_14	246.149122650716	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAATCTGAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	185095253	185139816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
tx.6970	chr2	+	2790	17	FSM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	-50	-1	-50	1	multi-exon	FALSE	canonical	3	1260	junction_7	140.688874382447	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCTTATGTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	84867527	84877454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
tx.6971	chr2	+	2968	16	ISM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	236	0	15	0	3prime_fragment	FALSE	canonical	3	1260	junction_6	129.702223059848	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	84867813	84877453	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
tx.6972	chr2	+	748	3	ISM	ENSMUSG00000027067.17	ENSMUST00000145097.2	679	4	426	-392	322	1	3prime_fragment	FALSE	canonical	3	1634	junction_1	29	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCTTATGTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	84876020	84877454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_84876117_84876596_84876784_84876989
tx.6973	chr2	+	1463	7	ISM	ENSMUSG00000033955.14	ENSMUST00000048400.4	4799	8	5732	4	2927	0	3prime_fragment	FALSE	canonical	3	230	junction_4	19.0613046073277	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCAGGATTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	84894234	84903388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
tx.6974	chr2	+	644	3	ISM	ENSMUSG00000033955.14	ENSMUST00000048400.4	4799	8	13578	8	10773	2	3prime_fragment	FALSE	canonical	3	268	junction_1	1.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTTGTCCAGGATTGT	NA	False	NA	NA	False	NA	NA	NA	84902080	84903384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_84902208_84902439_84902513_84902940
tx.6975	chr2	-	2013	4	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-70	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	7.40870359029762	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	87327313	87319427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_87320426_87321167_87321750_87322478_87322789_87327190
tx.6976	chr2	+	683	2	Genic_Genomic	ENSMUSG00000082908.5	novel	253	1	NA	NA	-116	381	multi-exon	FALSE	canonical	1	11	junction_1	0	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTAAGGAGTCTACCTG	NA	False	NA	NA	False	NA	NA	NA	87356372	87357122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr2_+_87356560_87356626
tx.6977	chr2	+	646	2	Genic_Genomic	ENSMUSG00000082908.5	novel	253	1	NA	NA	-105	371	multi-exon	FALSE	canonical	3	135	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTCTAAGG	NA	False	NA	NA	False	NA	NA	NA	87356383	87357112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr2_+_87356560_87356642
tx.6978	chr2	+	1512	9	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2170	42086	2170	3	internal_fragment	FALSE	canonical	3	521	junction_6	48.3806521245839	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATTAGTATGATTATTT	NA	False	NA	NA	False	NA	NA	NA	90509728	90524586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175
tx.6979	chr2	+	5064	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2170	-7	2170	7	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAGATTTATCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	90509728	90566679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
tx.698	chr1	+	4887	32	FSM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	14	5	0	-5	multi-exon	FALSE	canonical	3	1945	junction_14	331.30791485156	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	NA	False	NA	NA	NA	185095254	185160552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
tx.6980	chr2	+	2327	14	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	36592	0	-3752	0	3prime_fragment	FALSE	canonical	3	510	junction_2	69.9022986814221	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	NA	False	NA	NA	NA	90544150	90566672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
tx.6981	chr2	+	2060	11	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	40801	-28	457	28	3prime_fragment	FALSE	canonical	3	555	junction_9	67.2235821717349	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAAGTCTCTATACTAT	NA	False	NA	NA	False	NA	NA	NA	90548359	90566700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
tx.6982	chr2	+	1095	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	83	1418	7	1	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	1500	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	179	False	NA	NA	False	NA	NA	NA	90677581	90695736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
tx.6983	chr2	+	1068	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-35	1248	7	1	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	179	False	NA	NA	False	NA	NA	NA	90677581	90695736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
tx.6984	chr2	-	938	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	115	-7	-10	5	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	943	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGGTGGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	90735056	90724972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
tx.6985	chr2	+	2418	4	FSM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	19	0	-7	0	multi-exon	FALSE	canonical	3	67	junction_2	4.10960933531265	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCTGTGTTGACT	2357	False	NA	NA	False	NA	NA	NA	90735105	90740905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_90735254_90736009_90736628_90737888_90737996_90739360
tx.6986	chr2	-	1075	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	4	-139	-4	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTGTGGGACTCCCCT	NA	False	NA	NA	False	NA	NA	NA	90748152	90741060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
tx.6987	chr2	-	852	3	ISM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	556	8	107	-8	3prime_fragment	FALSE	canonical	3	356	junction_2	10	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCCCTGTGGGACTC	NA	False	NA	NA	False	NA	NA	NA	90747833	90741064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_90741664_90744327_90744520_90747772
tx.6988	chr2	+	1669	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	-63	0	-42	0	multi-exon	FALSE	canonical	3	40	junction_4	10.5791477608992	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	NA	False	NA	NA	NA	90865922	90876074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
tx.6989	chr2	+	531	2	ISM	ENSMUSG00000002104.12	ENSMUST00000128008.2	686	5	2008	-249	2008	0	3prime_fragment	FALSE	canonical	3	71	junction_1	0	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	NA	False	NA	NA	NA	90875137	90876074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_90875385_90875790
tx.699	chr1	+	615	3	ISM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	38373	2580	1759	-2580	3prime_fragment	FALSE	canonical	3	2638	junction_2	84.5	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAATCTGAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	185133613	185139816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_185133866_185139157_185139392_185139687
tx.6990	chr2	+	1584	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	58	-6	12	4	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	1187	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCTCAGCCTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	90884411	90889783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
tx.6992	chr2	+	2703	11	FSM	ENSMUSG00000002103.17	ENSMUST00000002172.14	4656	11	0	1953	0	3	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGTCTCCAAGATATAT	5057	False	NA	NA	False	NA	NA	NA	91033253	91042490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
tx.6993	chr2	-	1808	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	26	-277	4	-7	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAGCCCAACAGGGTT	3023	False	NA	NA	False	NA	NA	NA	91067301	91041923	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
tx.6994	chr2	+	605	2	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAGAAAATCTGGCATG	NA	False	NA	NA	False	NA	NA	NA	91067480	91068405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_91067747_91068066
tx.6995	chr2	+	1776	10	NIC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	17.8519286920123	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	4772	False	NA	NA	False	NA	NA	NA	91087179	91095023	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_91087272_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
tx.6996	chr2	+	1841	11	FSM	ENSMUSG00000027257.14	ENSMUST00000028694.12	1862	11	22	-1	-3	0	multi-exon	FALSE	canonical	3	29	junction_1	20.1345474247622	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	4772	False	NA	NA	False	NA	NA	NA	91087179	91095024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
tx.6997	chr2	+	2749	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	319	0	0	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5821	False	NA	NA	False	NA	NA	NA	91095637	91107276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
tx.6998	chr2	-	1621	9	FSM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	-57	413	5	1	multi-exon	TRUE	canonical	3	72	junction_5	19.7673974007708	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGAGTCTAAAGCCAGT	NA	False	NA	NA	False	NA	NA	NA	91275044	91108587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
tx.6999	chr2	+	1209	4	ISM	ENSMUSG00000027253.16	ENSMUST00000151907.2	898	5	325	-444	325	-1	3prime_fragment	FALSE	canonical	3	25	junction_1	1.63299316185545	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTTTGAACTGCCTAG	NA	False	NA	NA	False	NA	NA	NA	91306988	91309631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_91307064_91307442_91307569_91307865_91308097_91308854
tx.7	chr1	+	1930	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	38	81	-6	29	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	317	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTTAAATTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	5153340	5232671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
tx.700	chr1	-	1239	4	FSM	ENSMUSG00000039246.9	ENSMUST00000195481.2	584	4	0	-655	0	-147	multi-exon	FALSE	canonical	3	17	junction_2	56.8174464598878	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACTTTCAGATTTACT	NA	False	NA	NA	False	NA	NA	NA	185849485	185820074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_185820966_185821640_185821757_185846460_185846561_185849353
tx.7000	chr2	+	2916	14	FSM	ENSMUSG00000027247.17	ENSMUST00000090614.11	2866	14	-51	1	-51	-1	multi-exon	TRUE	canonical	3	46	junction_2	93.668116113923	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	91480515	91502670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_91480598_91482108_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
tx.7001	chr2	+	2806	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	76	1	-28	-1	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	91480538	91502670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
tx.7002	chr2	+	2852	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	348	1	-14	-1	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	91480552	91502670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
tx.7003	chr2	-	3515	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	29	7	-28	-6	multi-exon	TRUE	canonical	3	217	junction_4	20.2170445141937	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGCTTCCTATTCCA	NA	False	NA	NA	False	NA	NA	NA	91540892	91504969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
tx.7004	chr2	-	1012	3	FSM	ENSMUSG00000027244.15	ENSMUST00000139548.8	693	3	331	-650	331	650	multi-exon	FALSE	canonical	3	266	junction_2	1	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATATTTTATAGAAGTA	NA	False	NA	NA	False	NA	NA	NA	91509709	91505977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_91506809_91509071_91509201_91509657
tx.7005	chr2	+	2386	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-63	-15	6	15	multi-exon	FALSE	canonical	3	50	junction_1	26	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTACTTCTGGACTGCTC	3379	False	NA	NA	False	NA	NA	NA	91541203	91551905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_91541597_91542424_91543211_91550698
tx.7006	chr2	+	2123	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	0	22	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	34.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGACTGCTCTTGTGGG	3373	False	NA	NA	False	NA	NA	NA	91541197	91551912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_91541321_91542424_91543211_91550698
tx.7007	chr2	+	2184	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	22	15	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	37.5	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTACTTCTGGACTGCTC	3395	False	NA	NA	False	NA	NA	NA	91541219	91551905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_91541411_91542424_91543211_91550698
tx.7008	chr2	-	763	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	17	-7	17	7	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	508	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTTTTTAATATATAA	NA	False	NA	NA	False	NA	NA	NA	91762108	91760165	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
tx.7009	chr2	-	1001	3	ISM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	38289	0	38289	0	3prime_fragment	FALSE	canonical	3	12	junction_1	3.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGACTCTGTGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	91816558	91812672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_91813353_91813509_91813778_91816505
tx.701	chr1	-	1408	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	22	148	0	-148	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGACTTTCAGATTTAC	NA	False	NA	NA	False	NA	NA	NA	185849485	185820075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
tx.7010	chr2	+	1214	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	178	0	-9	0	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	185	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	False	NA	NA	False	NA	NA	NA	92205828	92211562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
tx.7011	chr2	-	3083	2	FSM	ENSMUSG00000049922.9	ENSMUST00000067631.7	3139	2	56	0	-29	0	multi-exon	FALSE	canonical	3	54	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATACAGCATGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	92290083	92283108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_92285120_92289011
tx.7012	chr2	+	2665	8	FSM	ENSMUSG00000068735.15	ENSMUST00000090554.11	2654	8	-5	-6	-5	-2	multi-exon	FALSE	canonical	3	171	junction_2	50.0424309757148	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCGTGGTGTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	93017923	93032100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
tx.7013	chr2	-	1555	6	ISM	ENSMUSG00000027215.14	ENSMUST00000111257.8	1003	10	22288	-719	-10104	0	3prime_fragment	TRUE	canonical	3	10	junction_2	1.46969384566991	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCTGAAGAGGCGGTA	NA	False	NA	NA	False	NA	NA	NA	93260736	93249455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475
tx.7014	chr2	-	1811	10	FSM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	13	0	13	0	multi-exon	FALSE	canonical	2	9	junction_8	1.4229164972073	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCTGAAGAGGCGGTA	NA	False	NA	NA	False	NA	NA	NA	93292834	93249455	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
tx.7015	chr2	-	2860	14	FSM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	10	1	-5	-1	multi-exon	FALSE	canonical	3	390	junction_9	31.3157237855525	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTCTAGAATGCTGG	NA	False	NA	NA	False	NA	NA	NA	93652903	93525976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
tx.7016	chr2	-	2480	13	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	8812	1	8789	-1	3prime_fragment	TRUE	canonical	3	390	junction_9	30.1389144905165	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTCTAGAATGCTGG	NA	False	NA	NA	False	NA	NA	NA	93644101	93525976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743
tx.7017	chr2	-	1488	7	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	59882	0	33303	0	3prime_fragment	TRUE	canonical	3	407	junction_5	25.6823545130374	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	NA	False	NA	NA	NA	93593031	93525975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897
tx.7018	chr2	-	1406	11	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	43.1723291009415	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATCCAAAAGCTTTTTG	8851	False	NA	NA	False	NA	NA	NA	93841099	93810973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
tx.7019	chr2	-	1258	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	-24	-6	0	-2	multi-exon	FALSE	canonical	3	71	junction_3	32.7210431781547	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATCCAAAAGCTTTT	8851	False	NA	NA	False	NA	NA	NA	93841099	93810975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
tx.702	chr1	-	1187	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	26	108	-7	6	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	850	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTCCCTGCTCAGA	NA	False	NA	NA	False	NA	NA	NA	186481529	186453282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
tx.7020	chr2	-	1677	10	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	-3	intron_retention	FALSE	canonical	3	58	junction_9	37.2253730009751	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGATCCAAAAGCTTT	8851	False	NA	NA	False	NA	NA	NA	93841099	93810976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607
tx.7021	chr2	-	1835	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	62	5	7	-5	multi-exon	TRUE	canonical	3	670	junction_5	45.0653969249135	444	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTGTATTTTTGATAG	NA	False	NA	NA	False	NA	NA	NA	93988247	93863038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
tx.7022	chr2	+	1446	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	594	0	594	0	multi-exon	FALSE	canonical	3	34	junction_1	0	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGAATCCTAAGTTATA	NA	False	NA	NA	False	NA	NA	NA	94237089	94242027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_94237312_94240803
tx.7023	chr2	-	3700	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	-10	46	-10	-46	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	94268491	94242072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
tx.7024	chr2	-	3714	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-19	-46	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	211.688282609319	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	94268500	94242072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
tx.7025	chr2	-	954	7	FSM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	-20	1339	-1	4	multi-exon	FALSE	canonical	3	119	junction_5	14.4299072146089	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTGGAAATGTACGCG	NA	False	NA	NA	False	NA	NA	NA	101459355	101392464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101459225
tx.7026	chr2	-	1827	2	FSM	ENSMUSG00000027165.17	ENSMUST00000177007.2	1458	2	-22	-347	-22	347	multi-exon	FALSE	canonical	3	166	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAAGGAAAATACT	NA	False	NA	NA	False	NA	NA	NA	101459376	101439344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_101441021_101459225
tx.7027	chr2	+	1187	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	4	0	-3	0	multi-exon	FALSE	canonical	3	160	junction_2	9.72830920561225	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	101716601	101731991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
tx.7028	chr2	-	1849	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	27	630	-24	-630	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTGACGTTATAACTG	NA	False	NA	NA	False	NA	NA	NA	102903831	102852049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
tx.7029	chr2	+	902	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	17	0	-3	0	multi-exon	FALSE	canonical	3	304	junction_6	40.9691618442729	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAATTTTCTTGATGT	4610	False	NA	NA	False	NA	NA	NA	102904036	102922989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
tx.703	chr1	+	1618	6	FSM	ENSMUSG00000039210.17	ENSMUST00000044812.12	1639	6	-53	74	-17	-74	multi-exon	FALSE	canonical	2	6	junction_5	31.740195336513	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCCTTATTATTTCTAT	NA	False	NA	NA	False	NA	NA	NA	186947687	186966540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966150
tx.7030	chr2	+	845	6	FSM	ENSMUSG00000010911.13	ENSMUST00000124540.8	837	6	2	-10	2	3	multi-exon	FALSE	canonical	3	22	junction_2	142.218704817615	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGGAAATTTTCTTGA	4615	False	NA	NA	False	NA	NA	NA	102904041	102922986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_102904187_102913299_102913401_102918905_102919024_102919747_102919884_102922093_102922262_102922809
tx.7031	chr2	+	859	7	NNC	ENSMUSG00000010911.13	novel	919	7	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	133.735331490556	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGGAAATTTTCTTGA	4611	False	NA	NA	False	NA	NA	NA	102904037	102922986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922223_102922809
tx.7032	chr2	-	2426	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	34	153	-1	-153	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCGTGTTTGGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	103315471	103284346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
tx.7033	chr2	-	4105	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-7	2071	-7	6	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGGTTATGGTACA	NA	False	NA	NA	False	NA	NA	NA	103628001	103595356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
tx.7034	chr2	-	3039	11	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	21082	-5	-14	5	3prime_fragment	FALSE	canonical	3	1559	junction_1	118.096104931534	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	NA	False	NA	NA	NA	103606367	103595357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278
tx.7035	chr2	-	4022	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	52	-5	52	5	multi-exon	FALSE	canonical	3	1559	junction_1	126.714184008996	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	NA	False	NA	NA	NA	103627397	103595357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
tx.7036	chr2	-	3474	17	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	48	2089	48	0	5prime_fragment	FALSE	canonical	3	1726	junction_3	108.266742354243	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	NA	False	NA	NA	NA	103627401	103597451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
tx.7037	chr2	+	2763	11	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-10	5	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	96.8347045227072	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCAACTGTATTTATT	NA	False	NA	NA	False	NA	NA	NA	103858178	103887840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
tx.7038	chr2	+	1383	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	-23	2360	-7	-2346	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAGACATTTTGAGGAA	NA	False	NA	NA	False	NA	NA	NA	103858181	103885489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
tx.7039	chr2	+	2792	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	116	1832	-7	-1595	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACAGTCTACTGCTAAAG	NA	False	NA	NA	False	NA	NA	NA	103858181	103891753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
tx.704	chr1	-	1782	3	FSM	ENSMUSG00000026608.14	ENSMUST00000192200.2	908	3	282	-1156	-100	0	multi-exon	FALSE	canonical	3	202	junction_2	16	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	NA	False	NA	NA	NA	188706537	188703291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_188704881_188706262_188706402_188706483
tx.7040	chr2	+	481	4	FSM	ENSMUSG00000068686.13	ENSMUST00000111132.8	436	4	-39	-6	-39	6	multi-exon	FALSE	canonical	3	19	junction_3	23.6690139681023	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTCTTT	NA	False	NA	NA	False	NA	NA	NA	103900154	103921538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103921348
tx.7041	chr2	+	634	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	20	1037	-19	54	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGAGTTTAAGCAGT	NA	False	NA	NA	False	NA	NA	NA	103926165	103944662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
tx.7042	chr2	+	1772	5	FSM	ENSMUSG00000032679.13	ENSMUST00000168176.8	1806	5	39	-5	0	0	multi-exon	FALSE	canonical	3	25	junction_1	94.0063162771524	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTATCTTGACTCTCT	NA	False	NA	NA	False	NA	NA	NA	103926184	103945699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_103926273_103928069_103928190_103934515_103934595_103941084_103941190_103944319
tx.7043	chr2	+	1473	4	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	106	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	171.663106759205	152	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGAATTTTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	104389526	104399283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_104389830_104390068_104390321_104398205_104398836_104398995
tx.7044	chr2	+	2409	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	-43	223	-34	-223	multi-exon	FALSE	canonical	3	327	junction_1	20.5	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAAGCTGTCTTTCTCT	6866	False	NA	NA	False	NA	NA	NA	104420833	104441528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_104421048_104439215_104439318_104439435
tx.7045	chr2	+	771	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-127	0	-32	0	multi-exon	FALSE	canonical	3	327	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTGCTTTAGCCTTTT	6868	False	NA	NA	False	NA	NA	NA	104420835	104439774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_104421048_104439215
tx.7046	chr2	+	2831	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	-18	4	-18	-4	multi-exon	TRUE	canonical	3	179	junction_7	45.0891062231222	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCTCCTGTTTCTTTG	6882	False	NA	NA	False	NA	NA	NA	104420849	104495770	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
tx.7047	chr2	-	576	3	FSM	ENSMUSG00000027175.11	ENSMUST00000132600.2	630	3	70	-16	-3	16	multi-exon	FALSE	canonical	3	159	junction_2	0.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAGAAAATTAAAAT	NA	False	NA	NA	False	NA	NA	NA	104542441	104535278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_104535547_104536700_104536888_104542320
tx.7048	chr2	-	1739	9	FSM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	65	-3	65	3	multi-exon	FALSE	canonical	3	114	junction_7	14.7394029729837	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAGAATGGTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	104573158	104552125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558556_104560528_104560920_104573026
tx.7049	chr2	-	1261	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	22	0	-15	0	multi-exon	FALSE	canonical	3	1722	junction_10	235.400531010446	1033	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2662	False	NA	NA	False	NA	NA	NA	104847403	104830000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
tx.705	chr1	-	1608	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.8538448651751	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	NA	False	NA	NA	NA	189654485	189612688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
tx.7050	chr2	+	1934	2	FSM	ENSMUSG00000045106.13	ENSMUST00000130611.2	318	2	9	-1625	9	1625	multi-exon	FALSE	canonical	1	1	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAGGTTTTTCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	104847474	104849874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_104847549_104848014
tx.7051	chr2	-	1342	3	ISM	ENSMUSG00000005973.7	ENSMUST00000127019.2	2208	5	3336	-1	3336	1	3prime_fragment	FALSE	canonical	3	1666	junction_2	11	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTCTTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	105222357	105217272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_105218372_105219321_105219522_105222314
tx.7052	chr2	-	2033	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	50	637	50	1	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	122	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTCTTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	105229614	105217272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
tx.7053	chr2	-	1582	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	54	1412	-27	-1412	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	152	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTGCCTTAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	105734855	105532783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
tx.7054	chr2	+	805	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	16	134	16	-134	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	335	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGTTTTAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	105734998	105795769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
tx.7055	chr2	-	1152	4	FSM	ENSMUSG00000027166.15	ENSMUST00000124163.8	697	4	4	-459	4	384	multi-exon	TRUE	canonical	3	9	junction_2	95.3496489534993	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGCCCAGTTCTGCCC	NA	False	NA	NA	False	NA	NA	NA	105833604	105796669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_105797440_105800792_105800862_105832273_105832421_105833438
tx.7056	chr2	-	977	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	292	-72	6	72	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	105833602	105796981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
tx.7057	chr2	-	3216	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	28	93	1	-93	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAATGCAGGCTTACTG	NA	False	NA	NA	False	NA	NA	NA	106804741	106792964	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
tx.7058	chr2	-	1383	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	5	10	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_4	54.0046294311886	26	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTTTCTTGTCCATT	NA	False	NA	NA	False	NA	NA	NA	106804737	106794763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804646
tx.7059	chr2	-	1937	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	2	10	intron_retention	FALSE	canonical	3	134	junction_3	55.0292851327566	16	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTTTCTTGTCCATT	NA	False	NA	NA	False	NA	NA	NA	106804740	106794763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804646
tx.706	chr1	-	1501	5	ISM	ENSMUSG00000089872.11	ENSMUST00000160889.8	2694	6	34617	0	11044	0	3prime_fragment	FALSE	canonical	3	29	junction_3	7.44983221287567	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCCTCATTTAATA	NA	False	NA	NA	False	NA	NA	NA	190531616	190505075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209
tx.7060	chr2	-	1957	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	12	10	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTTTCTTGTCCATT	NA	False	NA	NA	False	NA	NA	NA	106804730	106794763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
tx.7061	chr2	-	1458	4	NNC	ENSMUSG00000057234.10	novel	1894	6	NA	NA	113613	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	19.09624744987	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTTATTA	NA	False	NA	NA	False	NA	NA	NA	108995012	108922639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_108923643_108961829_108962009_108967685_108967878_108994928
tx.7062	chr2	-	1886	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	6	2	-4	1	multi-exon	FALSE	canonical	3	30	junction_4	7.25534285888682	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	109108629	108922643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
tx.7063	chr2	+	3316	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	55	-2	-33	2	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCCTGTTTTAT	1431	False	NA	NA	False	NA	NA	NA	109111137	109172094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
tx.7064	chr2	+	4157	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	5	66	5	-66	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGATGTCTGTATTTTG	NA	False	NA	NA	False	NA	NA	NA	109721202	109731282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
tx.7065	chr2	+	795	4	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	-3	4590	-3	9	5prime_fragment	FALSE	canonical	3	423	junction_3	48.8353241914998	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGTATTTTTAATTGA	NA	False	NA	NA	False	NA	NA	NA	109848158	109871071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918
tx.7066	chr2	+	583	3	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	0	12933	0	-8334	5prime_fragment	FALSE	canonical	3	465	junction_2	38	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGATAATTGCTGAAGTA	NA	False	NA	NA	False	NA	NA	NA	109848161	109862728	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_109848560_109852226_109852360_109862676
tx.7067	chr2	+	1602	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	0	468	0	-1	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTTGCATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	109848161	109875193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
tx.7068	chr2	+	465	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	41	603	41	-603	multi-exon	FALSE	canonical	3	3938	junction_1	0	914	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	112092311	112093011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_112092423_112092657
tx.7069	chr2	-	954	5	FSM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	20	9	13	-9	multi-exon	FALSE	canonical	3	778	junction_3	24.5395089600424	557	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAATGTTTCACAAGTTC	5017	False	NA	NA	False	NA	NA	NA	112198352	112193364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_112193700_112194136_112194298_112194496_112194651_112197746_112197862_112198163
tx.707	chr1	+	3091	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	30	-466	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	64.6948882944284	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTCATTTATTCCAG	NA	False	NA	NA	False	NA	NA	NA	190660718	190678693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190675026_190675085_190675973_190676138_190677136
tx.7070	chr2	+	2876	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	10	0	-5	0	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	NA	False	NA	NA	NA	112209565	112244585	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
tx.7071	chr2	+	2747	9	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	170.123806020792	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	112209570	112244580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
tx.7072	chr2	+	906	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	34	-4725	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	188.575415948103	63	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	394	False	NA	NA	False	NA	NA	NA	112285375	112297782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_112285485_112289804_112289925_112293145_112293285_112295081_112295163_112297325
tx.7073	chr2	+	1065	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	36	4725	36	-4725	multi-exon	FALSE	canonical	3	432	junction_1	48.4355241532493	429	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	396	False	NA	NA	False	NA	NA	NA	112285377	112297782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
tx.7074	chr2	+	1247	6	FSM	ENSMUSG00000003604.15	ENSMUST00000003705.12	4735	6	168	3320	168	342	multi-exon	FALSE	canonical	3	555	junction_4	26.4227174983952	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTTTCCTTTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	112323476	112461598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
tx.7075	chr2	-	1097	9	FSM	ENSMUSG00000040383.17	ENSMUST00000131785.8	3112	9	3	2012	3	-2012	multi-exon	FALSE	canonical	3	222	junction_1	25.6307920283397	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTTAGTAAATGTTTGT	7813	False	NA	NA	False	NA	NA	NA	114005816	113985235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
tx.7076	chr2	-	1452	3	NNC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	8	2190	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAAACTCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	114031913	114026850	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_114028109_114031435_114031534_114031817
tx.7077	chr2	-	1503	2	FSM	ENSMUSG00000040321.4	ENSMUST00000050668.4	4300	2	37	2760	8	2339	multi-exon	FALSE	canonical	3	9	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCAGGTGAGGAATACTTA	NA	False	NA	NA	False	NA	NA	NA	114031913	114026701	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_114028109_114031817
tx.7078	chr2	-	2698	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	40	-4	-19	0	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTGTGAATGTCAGTT	NA	False	NA	NA	False	NA	NA	NA	114485405	114346896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
tx.7079	chr2	-	2558	9	FSM	ENSMUSG00000057147.14	ENSMUST00000055144.8	2476	9	-67	-15	-1	15	multi-exon	FALSE	canonical	3	3	junction_1	69.7096657573396	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATCATGCGTGCTCCA	NA	False	NA	NA	False	NA	NA	NA	114485435	114347109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_114348774_114350149_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
tx.708	chr1	+	2501	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	38	1175	38	-1175	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGTCAAGTCCT	NA	False	NA	NA	False	NA	NA	NA	190660726	190677984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
tx.7080	chr2	+	2685	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-37	-171	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	114.47061046905	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACCAGTTTGGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	115412159	115609078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_115412467_115434044_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
tx.7081	chr2	+	2595	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-39	179	-22	-179	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGTTACCAGTTTG	NA	False	NA	NA	False	NA	NA	NA	115412174	115609070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
tx.7082	chr2	+	2655	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-21	-182	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	116.799821691248	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCCTAAGTTACCAGT	NA	False	NA	NA	False	NA	NA	NA	115412175	115609067	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115579557_115579622_115607382
tx.7083	chr2	-	592	3	ISM	ENSMUSG00000009549.15	ENSMUST00000138189.2	765	5	629	-13	-136	2	3prime_fragment	FALSE	canonical	3	1430	junction_1	16.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTTTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	118309500	118306328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_118306789_118307307_118307341_118309401
tx.7084	chr2	-	758	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	40	0	-23	0	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGTTTGTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	118310152	118306330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
tx.7085	chr2	-	1609	2	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACTACTGCTCACTG	NA	False	NA	NA	False	NA	NA	NA	118418260	118416493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_-_118418029_118418186
tx.7086	chr2	+	3631	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	37	0	37	0	multi-exon	TRUE	canonical	3	422	junction_10	74.3091181573454	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	NA	False	NA	NA	NA	118428728	118472072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
tx.7087	chr2	+	461	3	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	53	-6912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	274.5	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACTATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	118428744	118433364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_118428943_118430618_118430766_118433248
tx.7088	chr2	+	1410	8	FSM	ENSMUSG00000027331.16	ENSMUST00000110842.8	925	8	-38	-447	-37	-37	multi-exon	FALSE	canonical	3	391	junction_2	12.6813377263841	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACTAGAGCTTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	118644675	118665086	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
tx.7089	chr2	+	1352	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	201	3049	-28	5	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGACTAACACTAGGG	NA	False	NA	NA	False	NA	NA	NA	118644684	118665128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
tx.709	chr1	+	1509	3	FSM	ENSMUSG00000026634.17	ENSMUST00000137608.8	1585	3	89	-13	89	13	multi-exon	FALSE	canonical	3	110	junction_1	37.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAAAGAATCTTGAG	NA	False	NA	NA	False	NA	NA	NA	190660777	190670645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_190660956_190665063_190665390_190669640
tx.7090	chr2	+	2071	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	40	1554	-34	340	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCGCCCAAAGCCGTGT	NA	False	NA	NA	False	NA	NA	NA	118692474	118711836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
tx.7091	chr2	+	1968	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-34	342	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGCCCAAAGCCGTGTTC	NA	False	NA	NA	False	NA	NA	NA	118692474	118711838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
tx.7092	chr2	-	1870	4	NIC	ENSMUSG00000039983.14	novel	1870	4	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	18.6726180988812	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGATTTTCTGATTTTC	NA	False	NA	NA	False	NA	NA	NA	118859858	118848252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_118849646_118852549_118852707_118857618_118857869_118859788
tx.7093	chr2	-	1866	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	11	-7	-5	7	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGATTTTCTGATTTTC	NA	False	NA	NA	False	NA	NA	NA	118859863	118848252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
tx.7094	chr2	+	2079	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	28	599	28	-599	multi-exon	FALSE	canonical	3	106	junction_2	2.5	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGCTTTTTTTTTTTT	3283	False	NA	NA	False	NA	NA	NA	118865298	118869651	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_118865950_118867398_118867696_118868520
tx.7095	chr2	+	1916	8	FSM	ENSMUSG00000027326.14	ENSMUST00000028799.12	5527	8	-31	3642	0	6	multi-exon	FALSE	canonical	3	41	junction_1	11.0822527732683	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAATAGCCATACCAAT	7211	False	NA	NA	False	NA	NA	NA	118877599	118899758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
tx.7096	chr2	+	2645	8	FSM	ENSMUSG00000027326.14	ENSMUST00000152380.8	1573	8	16	-1088	-12	1088	multi-exon	FALSE	canonical	3	17	junction_1	17.907927784951	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCCTACAGAAGCCGA	7227	False	NA	NA	False	NA	NA	NA	118877615	118900840	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
tx.7097	chr2	+	1978	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	19	1371	9	711	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	769	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTATCTTTCCTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	118943306	118966400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
tx.7098	chr2	+	1188	4	ISM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	18750	1367	39	715	3prime_fragment	FALSE	canonical	3	676	junction_2	62.7587975240656	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCCTGTGGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	118962037	118966404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_118962099_118964554_118964685_118964867_118964990_118965529
tx.7099	chr2	-	2178	13	FSM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	72	-1	2	1	multi-exon	TRUE	canonical	3	215	junction_12	29.1989107483291	131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGACTGTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	118987443	118967480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
tx.71	chr1	-	1991	4	FSM	ENSMUSG00000079610.10	ENSMUST00000207843.2	2646	4	-9	664	3	-77	multi-exon	FALSE	canonical	3	9	junction_3	29.9369708257569	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGCCTTAAGTAGCCT	7017	False	NA	NA	False	NA	NA	NA	36586309	36577251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36585990
tx.710	chr1	+	2330	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-2	-1178	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGTCAAGT	NA	False	NA	NA	False	NA	NA	NA	190661040	190677981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
tx.7100	chr2	-	1008	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	175	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACTTTTCTTCCTCTTG	NA	False	NA	NA	False	NA	NA	NA	119039276	119002980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
tx.7101	chr2	+	1639	11	FSM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	369	0	-9	0	multi-exon	FALSE	canonical	1	23	junction_1	26.2152627299442	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGATGTTTTTTCTGTC	280	False	NA	NA	False	NA	NA	NA	119039483	119047530	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
tx.7102	chr2	-	788	4	FSM	ENSMUSG00000027317.9	ENSMUST00000076084.6	787	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	35	junction_3	4.96655480858378	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGAGTGTGGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	119060388	119048599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022
tx.7103	chr2	-	1231	5	NNC	ENSMUSG00000027317.9	novel	787	4	NA	NA	-7382	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	17.007351351695	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGAGTGTGGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	119067769	119048599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022_119060323_119067260
tx.7104	chr2	+	2278	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-5	0	-5	0	multi-exon	TRUE	canonical	3	163	junction_1	46.3102580429002	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	NA	False	NA	NA	NA	119067837	119079995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
tx.7105	chr2	+	2132	10	FSM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	178	13	178	0	multi-exon	FALSE	canonical	3	281	junction_4	16.649620912898	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	NA	False	NA	NA	NA	119068211	119079995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
tx.7106	chr2	-	1659	3	FSM	ENSMUSG00000034226.8	ENSMUST00000037360.8	1703	3	44	0	44	0	multi-exon	FALSE	canonical	3	45	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTGGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	119101709	119099681	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_119100969_119101162_119101222_119101396
tx.7107	chr2	+	3942	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	11	101	11	26	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGAGTCCTGCAAGCCT	6388	False	NA	NA	False	NA	NA	NA	119119233	119128833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
tx.7108	chr2	+	1552	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	27	58	27	-58	multi-exon	FALSE	canonical	3	568	junction_2	33	234	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGGTTTGTCTCTGTA	7179	False	NA	NA	False	NA	NA	NA	119181736	119184804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119182118_119182837_119182874_119183669
tx.7109	chr2	+	2582	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	24	3	0	-3	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGGTTGAGTTTTACC	NA	False	NA	NA	False	NA	NA	NA	119378201	119417505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
tx.711	chr1	-	1218	10	FSM	ENSMUSG00000026632.18	ENSMUST00000027945.6	1196	10	-6	-16	-6	0	multi-exon	FALSE	canonical	2	15	junction_3	9.99011857466179	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGATTTGTCTTGGACA	NA	False	NA	NA	False	NA	NA	NA	190795108	190778022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_190778518_190781478_190781557_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
tx.7110	chr2	+	1349	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	32	0	26	0	multi-exon	FALSE	canonical	3	71	junction_2	178.5	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTTGGACAGATTTT	NA	False	NA	NA	False	NA	NA	NA	119424809	119431227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119424916_119426739_119426824_119430068
tx.7111	chr2	+	1518	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	26	6756	26	0	multi-exon	FALSE	canonical	3	345	junction_2	41.5	198	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTTGGACAGATTTT	NA	False	NA	NA	False	NA	NA	NA	119424809	119431227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119424916_119426739_119426993_119430068
tx.7112	chr2	-	1453	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-20	15	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTATCTTTTGCTGG	7460	False	NA	NA	False	NA	NA	NA	119448970	119439977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
tx.7113	chr2	-	1592	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	-36	-474	-36	15	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	112	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTATCTTTTGCTGG	7444	False	NA	NA	False	NA	NA	NA	119448986	119439977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
tx.7114	chr2	+	2047	10	FSM	ENSMUSG00000027306.16	ENSMUST00000028771.8	3526	10	12	1467	0	-383	multi-exon	FALSE	canonical	3	97	junction_4	379.300265433633	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTCATTGTTTTAAGCG	NA	False	NA	NA	False	NA	NA	NA	119449209	119480258	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
tx.7115	chr2	+	2148	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	431	381	0	-381	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	447	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCATTGTTTTAAGCGTA	NA	False	NA	NA	False	NA	NA	NA	119449209	119480260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
tx.7116	chr2	-	1479	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110801.8	1478	5	-1	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	75.083287088406	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	NA	False	NA	NA	NA	119493302	119485926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
tx.7117	chr2	-	1310	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	109	junction_4	88.8453712919249	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	NA	False	NA	NA	NA	119493304	119485926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
tx.7118	chr2	+	329	3	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	21	34264	17	8922	5prime_fragment	FALSE	canonical	3	118	junction_1	4	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAGGAAAAACCAGAA	NA	False	NA	NA	False	NA	NA	NA	119505569	119531624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_119505762_119522596_119522708_119531598
tx.7119	chr2	+	2888	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	38	1738	34	-1738	multi-exon	FALSE	canonical	3	65	junction_14	16.8134482341515	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTGACTGCTGTAGCT	NA	False	NA	NA	False	NA	NA	NA	119505586	119564150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
tx.712	chr1	-	1218	10	FSM	ENSMUSG00000026632.18	ENSMUST00000110893.10	1242	10	13	11	13	1	multi-exon	FALSE	canonical	2	9	junction_2	11.4309521329882	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGGAATGATT	NA	False	NA	NA	False	NA	NA	NA	190795116	190778033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
tx.7120	chr2	+	702	5	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	38	24380	34	-1435	5prime_fragment	FALSE	canonical	3	77	junction_4	18.907670401189	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAGGAAGAAGAACAAGAAA	NA	False	NA	NA	False	NA	NA	NA	119505586	119541508	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445
tx.7121	chr2	-	1432	6	FSM	ENSMUSG00000034032.16	ENSMUST00000156506.8	1385	6	-14	-33	0	33	multi-exon	FALSE	canonical	3	120	junction_5	119.666870937616	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGGCTCAGAAATGTAAG	473	False	NA	NA	False	NA	NA	NA	119618009	119608098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
tx.7122	chr2	+	803	2	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCTATAAATTTAAGTCT	5735	False	NA	NA	False	NA	NA	NA	119680813	119685387	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_119680961_119684731
tx.7123	chr2	+	1287	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	49.2084568161025	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	131	True	NA	NA	NA	119857972	119863075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862321_119862482_119862594
tx.7124	chr2	+	1191	6	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	57.5902769571392	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	131	True	NA	NA	NA	119857972	119863075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862321_119862482_119862594
tx.7125	chr2	+	1363	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	10	0	10	0	multi-exon	FALSE	canonical	3	72	junction_5	32.3128836376389	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	132	True	NA	NA	NA	119857973	119863075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
tx.7126	chr2	+	1435	8	ISM	ENSMUSG00000033852.17	ENSMUST00000162393.8	5092	27	3	10437	3	-2397	5prime_fragment	FALSE	canonical	3	18	junction_5	45.292248289327	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTTCTCATGTTCCCC	NA	False	NA	135	True	NA	NA	NA	119857976	119863077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119861982_119862133_119862321_119862482_119862594
tx.7127	chr2	-	3415	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	3	312	3	-312	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTGAGTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	119985084	119919967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
tx.7128	chr2	-	1611	5	ISM	ENSMUSG00000046971.8	ENSMUST00000142183.2	2610	15	8933	9	8933	0	3prime_fragment	FALSE	canonical	2	10	junction_2	2.54950975679639	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCACTGAGCCTGT	3681	False	NA	NA	False	NA	NA	NA	120133925	120130446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_120131110_120131377_120131565_120132677_120132845_120133207_120133424_120133547
tx.7129	chr2	+	2471	5	FSM	ENSMUSG00000062646.13	ENSMUST00000154574.8	3099	5	-34	662	-34	-662	multi-exon	FALSE	canonical	3	9	junction_3	3.77491721763537	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATAATGTGGAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	120234342	120253478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505
tx.713	chr1	-	465	5	NIC	ENSMUSG00000026632.18	novel	342	4	NA	NA	0	43	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	15.9216833280907	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTGTCAGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	190795101	190790052	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_190790222_190791023_190791109_190792309_190792384_190793421_190793455_190794997
tx.7130	chr2	-	1574	5	ISM	ENSMUSG00000027288.17	ENSMUST00000171215.8	6391	19	7793	16656	-9	-7	internal_fragment	FALSE	canonical	3	1017	junction_3	88.4148601763301	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCATTTAAGTTTCATT	6245	False	NA	NA	False	NA	NA	NA	120362548	120356750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075
tx.7131	chr2	+	2033	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	24	666	-2	-666	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAGCTGTATTAGCTCT	NA	False	NA	NA	False	NA	NA	NA	120398175	120431070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
tx.7132	chr2	+	1576	3	ISM	ENSMUSG00000027287.15	ENSMUST00000116437.8	2730	9	27145	664	4328	-664	3prime_fragment	FALSE	canonical	3	374	junction_2	11.5	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGTATTAGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	120425322	120431072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_120425438_120427123_120427269_120429756
tx.7133	chr2	-	1800	6	NIC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	69.0582362937253	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	NA	NA	NA	120439833	120434718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439754
tx.7134	chr2	-	1973	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102497.10	1962	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	64	junction_5	44.5394207416307	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	NA	NA	NA	120439847	120434718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439595
tx.7135	chr2	+	1303	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	31	96	31	-96	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAACTATATGCATGATA	NA	False	NA	NA	False	NA	NA	NA	120439894	120450291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
tx.7136	chr2	+	2903	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	32	219	32	-219	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAGGTTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	120439895	120451822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
tx.7137	chr2	-	1630	9	ISM	ENSMUSG00000027284.17	ENSMUST00000110700.2	5996	28	7638	1663	575	1	3prime_fragment	FALSE	canonical	3	78	junction_7	5.2618912949623	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTGTTCTCCCTGC	9475	False	NA	NA	False	NA	NA	NA	120554361	120548665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228
tx.7138	chr2	+	1516	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	41	12	-4	-12	multi-exon	FALSE	canonical	3	138	junction_6	15.0811140172071	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGTGTCATTTAATGT	NA	False	NA	NA	False	NA	NA	NA	120838924	120847373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
tx.7139	chr2	+	2553	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	-76	0	-6	0	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120970902	120987159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
tx.714	chr1	+	2923	7	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	6	-1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.1517904045108	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTTACTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	190795214	190816755	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367_190815835_190815887
tx.7140	chr2	+	2597	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120970915	120987159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
tx.7141	chr2	-	2609	3	ISM	ENSMUSG00000050619.15	ENSMUST00000163766.8	3611	6	-6	4941	-6	-496	5prime_fragment	FALSE	canonical	3	33	junction_1	2	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCATTATCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	121001612	120996117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_120997200_120999679_120999885_121000290
tx.7142	chr2	+	3116	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	-21	1111	-15	610	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATACTCAATTTAGCTAT	NA	False	NA	NA	False	NA	NA	NA	121001674	121028140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
tx.7143	chr2	+	3556	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	53	641	6	-640	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCCCTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	121001701	121028610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
tx.7144	chr2	-	1431	10	ISM	ENSMUSG00000033526.17	ENSMUST00000150081.8	2485	18	-23	6695	-1	-5	5prime_fragment	TRUE	canonical	3	56	junction_9	18.8017598335769	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTTAAAATGATTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	121185815	121177533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
tx.7145	chr2	+	1519	10	FSM	ENSMUSG00000000308.15	ENSMUST00000078222.9	1518	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	125	junction_1	32.5602954456217	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	800	False	NA	NA	False	NA	NA	NA	121188255	121194218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_121188341_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
tx.7146	chr2	+	1601	10	NIC	ENSMUSG00000000308.15	novel	1518	10	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.8743660217344	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	807	False	NA	NA	False	NA	NA	NA	121188262	121194218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_121188430_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
tx.7147	chr2	+	1603	9	FSM	ENSMUSG00000000308.15	ENSMUST00000000317.13	1620	9	17	0	17	0	multi-exon	FALSE	canonical	3	189	junction_3	17.8881070826401	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	1652	False	NA	NA	False	NA	NA	NA	121189107	121194218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
tx.7148	chr2	-	1613	9	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	6.51800391224184	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGGTAAGTTCAAGT	NA	False	NA	NA	False	NA	NA	NA	121244272	121224835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_121224969_121227433_121227602_121227941_121228370_121229926_121229951_121230217_121230318_121240618_121240688_121240857_121241032_121242630_121242772_121243896
tx.7149	chr2	+	1906	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	157	707	49	-707	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	924	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	NA	False	NA	NA	NA	121244412	121268461	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
tx.715	chr1	+	752	3	FSM	ENSMUSG00000026630.10	ENSMUST00000027943.6	801	3	51	-2	-7	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTTTGTCCATCTTC	NA	False	NA	NA	False	NA	NA	NA	190830572	190841142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_190830725_190832924_190833030_190840647
tx.7150	chr2	-	1688	11	FSM	ENSMUSG00000027246.13	ENSMUST00000116432.2	1674	11	-12	-2	-12	2	multi-exon	FALSE	canonical	3	70	junction_5	7.95235814082842	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCGATCATTAGCCT	NA	False	NA	NA	False	NA	NA	NA	121273094	121269505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
tx.7151	chr2	+	522	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	173	2361	0	5	multi-exon	FALSE	canonical	3	5931	junction_1	722	2683	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGCCTGGTTTGACTGG	NA	False	NA	NA	False	NA	NA	NA	121279848	121281540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_121279923_121280455_121280565_121281201
tx.7152	chr2	+	590	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	135	236	-26	0	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	2318	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTCTTATATTGTGT	NA	False	NA	NA	False	NA	NA	NA	121287578	121288917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
tx.7153	chr2	-	2082	6	ISM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	4073	724	4073	-724	3prime_fragment	FALSE	canonical	3	438	junction_3	22.1684460438706	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGTTCTTGAAGTT	806	False	NA	NA	False	NA	NA	NA	121300475	121291439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259
tx.7154	chr2	-	2594	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	44	724	44	-724	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGTTCTTGAAGTT	9239	False	NA	NA	False	NA	NA	NA	121304504	121291439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
tx.7155	chr2	-	2283	6	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	4106	1402	4106	-1402	3prime_fragment	FALSE	canonical	3	437	junction_3	21.2922521119773	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTTGAGCACACCTTT	NA	False	NA	NA	False	NA	NA	NA	121333040	121323793	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812
tx.7156	chr2	-	2773	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	10	1415	10	-1415	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGCCACAAGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	121337136	121323806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
tx.7157	chr2	+	809	5	ISM	ENSMUSG00000027242.15	ENSMUST00000132373.2	3155	9	-49	7799	-17	-7223	5prime_fragment	FALSE	canonical	3	42	junction_4	6.13901457890434	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAAATGTAAG	NA	False	NA	NA	False	NA	NA	NA	121337186	121356047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932
tx.7158	chr2	+	750	5	ISM	ENSMUSG00000027242.15	ENSMUST00000110603.2	2341	13	-11	17443	-11	-7223	5prime_fragment	FALSE	canonical	3	27	junction_1	11.2998893799895	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAAATGTAAG	NA	False	NA	NA	False	NA	NA	NA	121340317	121356047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932
tx.7159	chr2	+	3582	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	444	1027	-15	0	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCTTTCTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	121786925	121843096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
tx.716	chr1	-	1945	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	39	0	39	0	multi-exon	FALSE	canonical	3	64	junction_2	6.37704215656966	44	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTAGTGTGGCACTGGTTT	NA	False	NA	NA	False	NA	NA	NA	190915498	190902492	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
tx.7160	chr2	+	555	4	ISM	ENSMUSG00000033411.17	ENSMUST00000131258.8	4290	6	-31	11460	-5	-11460	5prime_fragment	FALSE	canonical	3	361	junction_3	50.7302232949507	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAATTAGAAGATAACC	NA	False	NA	NA	False	NA	NA	NA	121786935	121809415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372
tx.7161	chr2	+	1816	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	24	3573	24	-3573	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	556	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTTATATCCCAAGA	NA	False	NA	NA	False	NA	NA	NA	121859050	121883506	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
tx.7162	chr2	-	1499	11	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60037	0	60037	0	3prime_fragment	FALSE	canonical	3	37	junction_10	25.8797217913949	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTGTTGCCAGACTTT	NA	False	NA	NA	False	NA	NA	NA	121956633	121950588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956581
tx.7163	chr2	-	1389	10	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60370	5	60370	-5	3prime_fragment	FALSE	canonical	3	83	junction_9	15.8449275288675	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTCCGTGTTGCCAG	NA	False	NA	NA	False	NA	NA	NA	121956300	121950593	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
tx.7164	chr2	+	2124	7	FSM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	14	junction_3	42.3910367884533	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	1936	False	NA	NA	False	NA	NA	NA	122016743	122036878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_122016834_122016944_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
tx.7165	chr2	+	1979	6	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	38.5725290848293	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTCAAAGTGATTATA	1945	False	NA	NA	False	NA	NA	NA	122016752	122036882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_122016834_122016944_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
tx.7166	chr2	+	1912	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	1946	False	NA	NA	False	NA	NA	NA	122016753	122036878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
tx.7167	chr2	+	1969	5	FSM	ENSMUSG00000027229.6	ENSMUST00000149861.2	448	5	-81	-1440	-81	4	multi-exon	FALSE	canonical	3	28	junction_1	43.0486643230658	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTCAAAGTGATTATA	2066	False	NA	NA	False	NA	NA	NA	122016873	122036882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
tx.7168	chr2	+	1894	4	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	-72	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	28.5228952870419	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	2075	False	NA	NA	False	NA	NA	NA	122016882	122036878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_122017027_122023712_122023787_122028866_122028956_122035291
tx.7169	chr2	+	2294	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	57	1	57	-1	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTATGTGGTTTGTGCC	NA	False	NA	NA	False	NA	NA	NA	122065286	122095820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
tx.717	chr1	+	571	2	FSM	ENSMUSG00000073478.7	ENSMUST00000139056.3	716	2	-3	148	-3	-148	multi-exon	FALSE	canonical	3	14	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTTCAGTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	190956647	190957884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_190956740_190957405
tx.7170	chr2	-	2286	10	NNC	ENSMUSG00000027199.15	novel	2389	9	NA	NA	27	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.31477507532169	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGAGTTTGATTTCTG	NA	False	NA	NA	False	NA	NA	NA	122441757	122424952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_122425454_122425524_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
tx.7171	chr2	+	682	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	4	106	4	0	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGTGCAAGAGATA	NA	False	NA	NA	False	NA	NA	NA	122479773	122483005	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
tx.7172	chr2	+	586	4	NIC	ENSMUSG00000033213.17	novel	792	5	NA	NA	19	5	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	57.249939349798	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGCAAGAGATATCAAA	NA	False	NA	NA	False	NA	NA	NA	122479788	122483010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_122479862_122479991_122480054_122481135_122481197_122482620
tx.7173	chr2	+	2081	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	27	1376	0	0	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGGCTGGCGATTCTTTT	8296	False	NA	NA	False	NA	NA	NA	122580449	122590019	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
tx.7174	chr2	+	2088	6	ISM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	-21	4227	-21	1224	5prime_fragment	FALSE	canonical	3	24	junction_1	1.46969384566991	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGGGAACAGAATGGGG	NA	False	NA	NA	False	NA	NA	NA	124910022	124926370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950
tx.7175	chr2	+	1697	9	FSM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	-32	289	-32	-289	multi-exon	TRUE	canonical	2	7	junction_6	24.0624188310319	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTAACACTTAATTACT	NA	False	NA	NA	False	NA	NA	NA	124910011	124930308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
tx.7176	chr2	+	1458	8	NIC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	0	-289	combination_of_known_splicesites	FALSE	canonical	3	4	junction_6	24.7608974154074	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTAACACTTAATTACT	NA	False	NA	NA	False	NA	NA	NA	124910043	124930308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124929339_124929442_124929883
tx.7177	chr2	-	1484	3	ISM	ENSMUSG00000027201.17	ENSMUST00000089825.13	1631	15	20827	-1093	-7035	0	3prime_fragment	FALSE	canonical	3	668	junction_1	10	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	124937966	124929660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_124930958_124937627_124937680_124937831
tx.7178	chr2	+	841	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	233	876	-185	-16	multi-exon	TRUE	canonical	3	2160	junction_3	102.069780052668	1378	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	NA	False	NA	NA	NA	125089634	125099652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
tx.7179	chr2	-	3113	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	125	154	-18	-154	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATGTGTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	125700934	125672377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
tx.718	chr1	+	1727	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	13	506	13	-506	multi-exon	TRUE	canonical	3	75	junction_7	21.6248156769306	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGTATCTTGATTTCA	NA	False	NA	NA	False	NA	NA	NA	191058121	191082605	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
tx.7180	chr2	-	3084	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	124	-1135	-19	-163	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	145	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATATTATAAAAGTATGT	NA	False	NA	NA	False	NA	NA	NA	125700935	125672386	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
tx.7181	chr2	-	1758	11	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	296.558324786205	10	1	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTCTTGATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	125700935	125673518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125691649_125691774_125700855
tx.7182	chr2	+	1794	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	134	0	-2	0	multi-exon	FALSE	canonical	3	86	junction_4	15.4040238449986	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTGCTCTTGAATG	NA	False	NA	NA	False	NA	NA	NA	125708160	125825507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
tx.7183	chr2	+	1324	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	19	-1	19	1	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7298	False	NA	NA	False	NA	NA	NA	125994079	126007197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
tx.7184	chr2	+	1179	4	NIC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	20	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	74.5534856477028	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7299	False	NA	NA	False	NA	NA	NA	125994080	126007197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_125994135_125996465_125996781_126001689_126001949_126006646
tx.7185	chr2	+	1662	5	NNC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	44	1	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	62.1867148191637	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7323	False	NA	NA	False	NA	NA	NA	125994104	126007197	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_125994498_125996465_125996781_126000329_126000474_126001689_126001949_126006646
tx.7186	chr2	+	2301	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	617	0	-566	0	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGAGGCTTCGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	126394943	126430163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
tx.7187	chr2	-	1526	2	ISM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	36219	-1	24007	1	3prime_fragment	FALSE	canonical	3	222	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	8832	False	NA	NA	False	NA	NA	NA	126481203	126470831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_126472303_126481148
tx.7188	chr2	-	2083	6	ISM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	23252	1470	10974	1	3prime_fragment	FALSE	canonical	3	222	junction_1	75.2632712549754	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	6417	False	NA	NA	False	NA	NA	NA	126494236	126470831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152
tx.7189	chr2	-	2693	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	-10	1470	-10	1	multi-exon	FALSE	canonical	3	222	junction_1	62.4468524026632	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	NA	False	NA	NA	NA	126517498	126470831	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
tx.719	chr1	-	4088	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	-1	125	-1	-125	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAGATGGCTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	191307657	191269601	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
tx.7190	chr2	-	1397	8	FSM	ENSMUSG00000027361.16	ENSMUST00000103226.10	1338	8	-53	-6	5	6	multi-exon	FALSE	canonical	3	353	junction_7	27.2074419591255	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTGCAGAATTTGT	NA	False	NA	NA	False	NA	NA	NA	126517459	126480934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
tx.7191	chr2	+	570	2	Genic_Genomic	ENSMUSG00000098024.2	novel	497	2	NA	NA	-266	-1	multi-exon	FALSE	canonical	3	6	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTGGTAGTAATTGTGT	NA	False	NA	NA	False	NA	NA	NA	126517569	126525724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr2_+_126517737_126525321
tx.7192	chr2	+	384	2	ISM	ENSMUSG00000027363.16	ENSMUST00000138859.2	3463	17	37	40993	5	-40993	5prime_fragment	FALSE	canonical	3	389	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTGATCACAAGAGTAA	3598	False	NA	NA	False	NA	NA	NA	126549284	126560175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_126549408_126559914
tx.7193	chr2	+	4152	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	7	-14	7	14	multi-exon	TRUE	canonical	3	323	junction_9	42.2163738639668	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATGTTTTGTCTTCTTT	3583	False	NA	NA	False	NA	NA	NA	126549269	126601231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
tx.7194	chr2	-	2081	16	ISM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	11	37658	11	45	5prime_fragment	FALSE	canonical	3	201	junction_10	20.8373596109381	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACCAAGCGCTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	126718139	126671142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
tx.7195	chr2	-	2009	15	ISM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	14	38565	14	711	5prime_fragment	FALSE	canonical	3	201	junction_9	21.566697683688	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACGTTTTTATTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	126718136	126672049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
tx.7196	chr2	-	2622	16	NIC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	200	1025	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	7.10742960257473	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTTTCTGATCTT	8479	False	NA	NA	False	NA	NA	NA	126774955	126735158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755219_126755274_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
tx.7197	chr2	-	3503	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	200	1913	200	-1913	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCTGTTTTAGTAACAT	8479	False	NA	NA	False	NA	NA	NA	126774955	126734223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
tx.7198	chr2	+	2335	5	FSM	ENSMUSG00000001999.16	ENSMUST00000142861.2	1460	5	4	-879	2	879	multi-exon	FALSE	canonical	3	72	junction_1	50.701947694344	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCGTCCTGGGATTCAT	2213	False	NA	NA	False	NA	NA	NA	126912588	126930669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764
tx.7199	chr2	+	1156	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	4	0	4	0	multi-exon	FALSE	canonical	3	72	junction_1	50.5988626152721	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	2215	False	NA	NA	False	NA	NA	NA	126912590	126939004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
tx.72	chr1	-	992	4	FSM	ENSMUSG00000079610.10	ENSMUST00000194894.4	664	4	7	-335	-5	335	multi-exon	FALSE	canonical	3	25	junction_1	19.6015872373189	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGGGCAGGTTTCTTTT	7021	False	NA	NA	False	NA	NA	NA	36586305	36578105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_36578616_36580904_36581144_36581842_36581947_36586166
tx.720	chr1	+	3265	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	91	1991	0	51	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCGAGACAGGGTTTCT	8284	False	NA	NA	False	NA	NA	NA	191307838	191353809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
tx.7200	chr2	-	2066	14	ISM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	8352	17	-3552	1	3prime_fragment	TRUE	canonical	3	394	junction_9	31.4890795384291	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	NA	False	NA	NA	NA	126967522	126945745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470
tx.7201	chr2	-	2661	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	17	17	17	1	multi-exon	FALSE	canonical	3	394	junction_9	30.9044738701424	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	NA	False	NA	NA	NA	126975857	126945745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
tx.7202	chr2	-	349	2	FSM	ENSMUSG00000044145.3	ENSMUST00000150956.2	2364	2	-29	2044	-3	-2044	multi-exon	FALSE	canonical	3	36	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAGATCTTCTCTCGG	NA	False	NA	NA	False	NA	NA	NA	127050203	127046530	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127046771_127050094
tx.7203	chr2	-	1406	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	59	1610	59	72	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	296	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATTGTGATCTTTAT	NA	False	NA	NA	False	NA	NA	NA	127089677	127084467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
tx.7204	chr2	+	2637	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	480	-1	5	1	multi-exon	FALSE	canonical	3	326	junction_5	27.592515992122	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGAGTGTTCATTTCTG	NA	False	NA	NA	False	NA	NA	NA	127112628	127140853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
tx.7205	chr2	+	2649	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-33	0	at_least_one_novel_splicesite	TRUE	canonical	3	44	junction_1	48.8950470250594	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4968	False	NA	NA	False	NA	NA	NA	127267085	127278012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
tx.7206	chr2	+	2652	22	FSM	ENSMUSG00000046338.5	ENSMUST00000062211.4	2628	22	-24	0	-24	0	multi-exon	FALSE	canonical	3	16	junction_1	53.4925768898164	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4977	False	NA	NA	False	NA	NA	NA	127267094	127278012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
tx.7207	chr2	+	2643	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	60.6148017815066	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4983	False	NA	NA	False	NA	NA	NA	127267100	127278012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
tx.7208	chr2	+	823	7	ISM	ENSMUSG00000046338.5	ENSMUST00000062211.4	2628	22	8906	0	8906	0	3prime_fragment	FALSE	canonical	3	218	junction_2	19.2303290547914	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5259	False	NA	NA	False	NA	NA	NA	127276024	127278012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
tx.7209	chr2	-	1218	8	FSM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	-7	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	10.321366781822	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	127286477	127278134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793_127284045_127286336
tx.721	chr1	+	3164	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	62	1	-4	-1	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	NA	False	NA	NA	NA	191553617	191565161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
tx.7210	chr2	+	1585	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	53	2843	53	131	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	406	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGGTATATAGCTGTG	4020	False	NA	NA	False	NA	NA	NA	127429194	127445906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
tx.7211	chr2	-	2334	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	444	0	-32	0	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTCACTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	127498171	127475145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
tx.7212	chr2	-	1162	4	FSM	ENSMUSG00000027377.3	ENSMUST00000028856.3	2006	4	25	819	25	-819	multi-exon	FALSE	canonical	3	53	junction_2	4.54606056566195	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGGTTTGGGGAGTC	NA	False	NA	NA	False	NA	NA	NA	127571827	127547124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127547844_127550756_127550880_127554188_127554357_127571675
tx.7213	chr2	-	1584	14	ISM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	18543	-2	-16284	0	3prime_fragment	FALSE	canonical	3	41	junction_11	14.5081083226102	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTATATCTAAATTTT	NA	False	NA	NA	False	NA	NA	NA	127612274	127582653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178
tx.7214	chr2	-	2261	20	FSM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	37	-2	-6	0	multi-exon	TRUE	canonical	3	41	junction_11	13.7437973922422	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTATATCTAAATTTT	2828	False	NA	NA	False	NA	NA	NA	127630780	127582653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
tx.7215	chr2	-	442	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	0	358	0	-358	multi-exon	FALSE	canonical	3	537	junction_1	0	506	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATCTTTTTCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	127634408	127633665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127633753_127634053
tx.7216	chr2	-	3404	25	FSM	ENSMUSG00000027379.15	ENSMUST00020183811.1	3418	25	10	4	10	-4	multi-exon	TRUE	canonical	0	0	junction_18	145.15221297161	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCTAGTTGTTCTAAAT	NA	False	NA	NA	False	NA	NA	NA	127673769	127643039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
tx.7217	chr2	-	3418	25	FSM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	4	-4	-2	4	multi-exon	FALSE	canonical	0	0	junction_18	145.15221297161	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTAGTTGTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	127673781	127643040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
tx.7218	chr2	+	1085	4	FSM	ENSMUSG00000027381.17	ENSMUST00000110341.9	5036	4	-39	3990	-38	115	multi-exon	FALSE	canonical	3	10	junction_1	11.2644968324772	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGAGGGCTTTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	127967919	128000477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150
tx.7219	chr2	+	2962	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	9	-871	9	818	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCAAATGCCTACTTTC	NA	False	NA	NA	False	NA	NA	NA	128660231	128694530	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
tx.722	chr1	+	1909	9	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	151.790151195656	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	NA	False	NA	NA	NA	191553617	191565161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248_191563734_191564988
tx.7220	chr2	-	1567	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	57	0	57	0	multi-exon	FALSE	canonical	2	159	junction_3	33.6115214621415	192	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTCATACTTGATT	NA	False	NA	NA	False	NA	NA	NA	128785940	128768187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
tx.7221	chr2	-	1555	9	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_6	71.0922595997623	42	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTCATACTTGATT	NA	False	NA	NA	False	NA	NA	NA	128785940	128768187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777243_128777467_128781762_128781857_128785767
tx.7222	chr2	+	2017	7	FSM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	16	2534	16	-2534	multi-exon	FALSE	canonical	3	70	junction_4	11.1118055338555	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATCTTACTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	128907877	128935669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
tx.7223	chr2	+	1332	8	NNC	ENSMUSG00000027395.16	novel	2769	13	NA	NA	-9	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	107.755960107901	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	128942937	128968515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952009_128968287
tx.7224	chr2	+	3984	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	15	-1	15	1	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	128942929	128968515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
tx.7225	chr2	+	1216	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	87	22	-17	-22	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	346	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTTGGAGACCTCC	3912	False	NA	NA	False	NA	NA	NA	128971706	128976032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
tx.7226	chr2	+	3278	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	37	1	0	-1	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	129040720	129053535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
tx.7227	chr2	+	4853	5	NIC	ENSMUSG00000027397.15	novel	3219	10	NA	NA	-1537	-1	intron_retention	FALSE	canonical	3	499	junction_4	37.3965239026303	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	129046702	129053535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
tx.7228	chr2	-	3117	9	FSM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	20	0	20	0	multi-exon	TRUE	canonical	3	256	junction_2	30.0416377715996	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	129139112	129110129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
tx.7229	chr2	-	1102	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	52	7	-17	-7	multi-exon	TRUE	canonical	3	3295	junction_4	264.518850409989	1995	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGATATATTCATTTGT	NA	False	NA	NA	False	NA	NA	NA	130021271	130013561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
tx.723	chr1	+	3124	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	-4	-20	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	134.022233915397	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGTGGAAATTTAT	NA	False	NA	NA	False	NA	NA	NA	191553617	191565142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
tx.7230	chr2	+	1872	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	0	5	0	1	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	807	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	130116349	130121228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
tx.7231	chr2	-	622	4	ISM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	3541	3	-455	1	3prime_fragment	FALSE	canonical	3	805	junction_3	27.3536509852382	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	130122926	130121231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875
tx.7232	chr2	-	1511	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	102	3	-11	1	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	623	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	130126365	130121231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
tx.7233	chr2	-	2378	14	FSM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	-12	0	-12	0	multi-exon	FALSE	canonical	3	131	junction_8	18.681383322448	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTTGAGTTCCTATTC	NA	False	NA	NA	False	NA	NA	NA	130239506	130232694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
tx.7234	chr2	-	2983	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	-24	537	8	5	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGTTTGTTTTTA	8033	False	NA	NA	False	NA	NA	NA	130266222	130260139	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
tx.7235	chr2	+	2659	24	FSM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	-33	535	-7	0	multi-exon	FALSE	canonical	0	0	junction_15	83.6383654878219	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	130266251	130285654	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
tx.7236	chr2	+	977	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	0	3301	0	0	multi-exon	FALSE	canonical	3	506	junction_2	32.273139846559	147	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	385	False	NA	NA	False	NA	NA	NA	130405661	130407314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
tx.7237	chr2	+	1040	3	FSM	ENSMUSG00000037740.9	ENSMUST00000046149.9	1057	3	17	0	17	0	multi-exon	FALSE	canonical	3	543	junction_1	21	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	402	False	NA	NA	False	NA	NA	NA	130405678	130407314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_130405911_130406000_130406352_130406857
tx.7238	chr2	+	537	3	FSM	ENSMUSG00000027301.8	ENSMUST00000028764.6	537	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTGGTGTCTAATTGT	NA	False	NA	NA	False	NA	NA	NA	130418092	130418974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_130418250_130418510_130418713_130418796
tx.7239	chr2	-	2539	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	0	-1328	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	NA	NA	NA	130471947	130433249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
tx.724	chr1	-	2445	10	NNC	ENSMUSG00000037375.17	novel	2839	12	NA	NA	-4689	3	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_9	7.09372875533883	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGTCTTGATACTTC	NA	False	NA	NA	False	NA	NA	NA	192424277	192195132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192424232
tx.7240	chr2	-	2374	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	29	1328	18	-1328	multi-exon	TRUE	canonical	3	59	junction_5	36.0477461153953	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	NA	NA	NA	130471929	130433249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
tx.7241	chr2	-	3105	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	92.5	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGATCCACAAAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	130471933	130455765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_130458626_130470408_130470556_130471835
tx.7242	chr2	-	3136	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	20	-6	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	74	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGATCCACAAAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	130471927	130455765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_130458663_130470408_130470556_130471835
tx.7243	chr2	-	1123	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	41	74	41	1	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGTTGTTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	130506538	130495953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
tx.7244	chr2	+	1190	8	FSM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	200	0	2	0	multi-exon	TRUE	canonical	3	338	junction_5	87.1842992792643	306	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5435	False	NA	NA	False	NA	NA	NA	130509729	130523534	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
tx.7245	chr2	-	1101	5	ISM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	11857	-2	2903	2	3prime_fragment	FALSE	canonical	3	116	junction_4	16.4544826719043	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCGCCCTCCCTGGTA	NA	False	NA	NA	False	NA	NA	NA	130527582	130526030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414
tx.7246	chr2	-	612	2	FSM	ENSMUSG00000085566.2	ENSMUST00000133766.2	547	2	-3	-62	-3	62	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCTCTGGCTAGT	NA	False	NA	NA	False	NA	NA	NA	130748302	130725467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130725908_130748130
tx.7247	chr2	-	1286	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-37	-8	-15	7	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	809	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGCGGGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	131001977	130988236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
tx.7248	chr2	+	1377	2	FSM	ENSMUSG00000068264.12	ENSMUST00000134086.2	868	2	3	-512	3	0	multi-exon	FALSE	canonical	3	35	junction_1	0	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	NA	False	NA	NA	NA	131052292	131055434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_131052602_131054366
tx.7249	chr2	+	1588	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	-67	0	3	0	multi-exon	FALSE	canonical	3	39	junction_2	10	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	NA	False	NA	NA	NA	131052292	131055434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_131052602_131053182_131053394_131054366
tx.725	chr1	-	312	3	NNC	ENSMUSG00000016200.15	novel	9274	9	NA	NA	-9	-93445	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	9	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGTCTGGAATCTTA	177	False	NA	NA	False	NA	NA	NA	192718034	192705815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_192705976_192709277_192709326_192717930
tx.7250	chr2	+	2874	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	-7	0	-3	0	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7257	False	NA	NA	False	NA	NA	NA	131075979	131089945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
tx.7251	chr2	+	2229	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	-59	0	-39	0	multi-exon	FALSE	canonical	3	32	junction_6	48.183746942177	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	NA	False	NA	NA	NA	131333803	131367092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366163_131366254_131366662
tx.7252	chr2	+	2131	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	125	14	-34	2	multi-exon	FALSE	canonical	3	113	junction_6	10.8269211792745	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	131333808	131367089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
tx.7253	chr2	+	1353	6	FSM	ENSMUSG00000027333.19	ENSMUST00000110179.9	1320	6	-36	3	-16	2	multi-exon	FALSE	canonical	3	15	junction_4	49.3128786423993	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	131333826	131367089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131363978_131364140_131366662
tx.7254	chr2	+	2169	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	15	0	1	0	multi-exon	FALSE	canonical	3	54	junction_2	0.5	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCGGGGTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	131751862	131780349	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_131751924_131754114_131754213_131778339
tx.7255	chr2	-	1579	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	33	0	-5	0	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	467	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4903	False	NA	NA	False	NA	NA	NA	132089694	132081411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
tx.7256	chr2	-	1556	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	93	junction_3	223.123782287371	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4903	False	NA	NA	False	NA	NA	NA	132089694	132081411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
tx.7257	chr2	-	1292	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	102	124	102	-124	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	1513	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCAGTGCCGCCTTTGT	8327	False	NA	NA	False	NA	NA	NA	132095132	132091205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
tx.7258	chr2	+	515	2	FSM	ENSMUSG00000087377.2	ENSMUST00000124336.2	921	2	0	406	0	-406	multi-exon	FALSE	canonical	3	32	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGAATGTCCGGTTAA	545	False	NA	NA	False	NA	NA	NA	132095276	132102847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_132095450_132102505
tx.7259	chr2	+	1586	13	FSM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	145	6665	52	57	multi-exon	FALSE	canonical	2	258	junction_5	60.9331942923286	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGTCATTTTTTTTTCT	5389	False	NA	NA	False	NA	NA	NA	132105212	132147305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
tx.726	chr1	-	2648	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	54	2868	-11	483	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGCTTTGCCTGCGTTT	NA	False	NA	NA	False	NA	NA	NA	192812526	192789577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
tx.7260	chr2	+	1408	13	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	3462	58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.581213686209	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTCATTTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	132131320	132147306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_132131347_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
tx.7261	chr2	-	1723	2	ISM	ENSMUSG00000027346.16	ENSMUST00000127712.8	4356	7	7895	1	3991	0	3prime_fragment	FALSE	canonical	3	94	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	9385	False	NA	NA	False	NA	NA	NA	132376056	132371002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_132372663_132375993
tx.7262	chr2	+	1073	3	FSM	ENSMUSG00000044991.11	ENSMUST00000061891.11	1076	3	3	0	3	0	multi-exon	FALSE	canonical	3	37	junction_1	20.5	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	NA	False	NA	NA	NA	132528853	132592975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_132528902_132533869_132534052_132592132
tx.7263	chr2	+	1026	2	ISM	ENSMUSG00000044991.11	ENSMUST00000110132.3	1471	3	1666	0	1666	0	3prime_fragment	FALSE	canonical	3	78	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	NA	False	NA	NA	NA	132533868	132592975	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_132534052_132592132
tx.7264	chr2	-	2809	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	19	0	19	0	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	False	NA	NA	False	NA	NA	NA	132657955	132646126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
tx.7265	chr2	-	553	4	ISM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	19	6219	19	-9	5prime_fragment	FALSE	canonical	3	367	junction_2	42.9055810925442	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAGTAAGTCACAT	NA	False	NA	NA	False	NA	NA	NA	132657955	132652345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_132652429_132652908_132653019_132653967_132654096_132657723
tx.7266	chr2	+	3177	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	5	-3	5	3	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTCAGGTCACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	132658065	132685818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
tx.7267	chr2	+	556	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	272.981024981591	69	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	NA	False	NA	NA	NA	135488442	135493987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135492537_135492672_135493417_135493478_135493766
tx.7268	chr2	+	422	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	252.149137416728	180	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	NA	False	NA	NA	NA	135488442	135493987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493478_135493766
tx.7269	chr2	-	2958	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	220	0	-15	0	multi-exon	FALSE	canonical	3	83	junction_3	119.159389055164	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	False	NA	NA	False	NA	NA	NA	136733089	136715699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
tx.727	chr1	+	4138	8	FSM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	-16	-9	-16	9	multi-exon	FALSE	canonical	3	26	junction_1	3.81190401832181	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTAGAGTACTGGTTC	NA	False	NA	NA	False	NA	NA	NA	192835402	192854340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192850140_192850824_192850944_192851589
tx.7270	chr2	-	731	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	218	-5	218	5	multi-exon	FALSE	canonical	3	323	junction_1	8.5	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCCTTCACAAGTTACAC	NA	False	NA	NA	False	NA	NA	NA	136733091	136723185	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_136723560_136727392_136727621_136732962
tx.7271	chr2	-	2236	14	FSM	ENSMUSG00000039033.12	ENSMUST00000110079.9	2258	14	22	0	2	0	multi-exon	FALSE	canonical	3	37	junction_3	20.460092487948	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	139908703	139675399	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
tx.7272	chr2	-	2162	8	ISM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	3	142737	3	315	5prime_fragment	FALSE	canonical	3	57	junction_2	18.1186565254081	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTATTTTCTCAGTATGT	NA	False	NA	NA	False	NA	NA	NA	139908702	139818136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
tx.7273	chr2	-	3386	14	FSM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	13	-3	13	3	multi-exon	TRUE	canonical	3	379	junction_8	12.585330053057	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTTGTATAGCATTGGT	6990	False	NA	NA	False	NA	NA	NA	140012471	139961799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
tx.7274	chr2	-	1884	9	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	12	28913	12	14	5prime_fragment	FALSE	canonical	3	379	junction_3	15.6823945875622	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGAAAATGATATGGA	6989	False	NA	NA	False	NA	NA	NA	140012472	139990715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
tx.7275	chr2	-	625	2	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	13	48023	13	-8543	5prime_fragment	FALSE	canonical	3	434	junction_1	0	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGGGTACCACTGACC	6990	False	NA	NA	False	NA	NA	NA	140012471	140009825	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_140010376_140012396
tx.7276	chr2	+	1091	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	26	49	26	8	multi-exon	FALSE	canonical	3	226	junction_10	17.7042367810646	198	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCCCAGAATTTTCATC	NA	False	NA	NA	False	NA	NA	NA	140012594	140045560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
tx.7277	chr2	+	1093	4	FSM	ENSMUSG00000068205.15	ENSMUST00000043836.8	3552	4	0	2459	0	0	multi-exon	FALSE	canonical	3	66	junction_3	7.40870359029762	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGATTCCTGTTTATGCT	NA	False	NA	NA	False	NA	NA	NA	140237354	140262415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
tx.7278	chr2	-	2915	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	0	1062	0	65	multi-exon	FALSE	canonical	3	47	junction_1	10.5	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTCCAATGGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	140513389	140501179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_140503672_140505180_140505380_140513165
tx.7279	chr2	+	955	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	1106	0	-1106	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	310	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTTTATTGTCCTATC	1988	False	NA	NA	False	NA	NA	NA	142904958	142913667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
tx.728	chr1	-	848	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	24	-1	24	1	multi-exon	FALSE	canonical	3	79	junction_1	0	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTATTTAATTCTTGG	NA	False	NA	NA	False	NA	NA	NA	192955501	192954467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_192955111_192955296
tx.7280	chr2	+	1706	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	205	0	205	0	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	1442	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	143757444	143785244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
tx.7281	chr2	-	3113	23	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	22796	0	-5302	0	3prime_fragment	FALSE	canonical	3	237	junction_15	46.7493757416225	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	NA	False	NA	NA	False	NA	NA	NA	143830387	143789314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067
tx.7282	chr2	-	603	2	ISM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	92	3984	92	-3984	5prime_fragment	FALSE	canonical	3	227	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGACAGAAAGAAGAAGGAG	9850	False	NA	NA	False	NA	NA	NA	143853091	143831756	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_143832187_143852918
tx.7283	chr2	-	2315	13	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_12	367.963870131596	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	NA	NA	NA	144112712	144092042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112620
tx.7284	chr2	-	1918	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	94	407	94	-407	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTGCTTTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	144112398	144092449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
tx.7285	chr2	-	1992	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	113	407	-9	-407	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	242	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTGCTTTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	144112713	144092449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
tx.7286	chr2	+	2054	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	253	1	16	-1	multi-exon	FALSE	canonical	3	74	junction_1	188.862383761299	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	NA	False	NA	NA	NA	144112835	144122435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
tx.7287	chr2	+	2017	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	111	712	70	-1	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	225	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	NA	False	NA	NA	NA	144112930	144122435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
tx.7288	chr2	+	2276	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	82	1	82	-1	multi-exon	FALSE	canonical	3	60	junction_1	194.922420465169	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	NA	False	NA	NA	NA	144112942	144122435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913_144121047_144121400
tx.7289	chr2	-	1121	3	ISM	ENSMUSG00000037279.14	ENSMUST00000103171.10	1547	4	606	0	237	0	3prime_fragment	FALSE	canonical	3	14	junction_1	5.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTTTTTTAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	144173009	144147094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_144147840_144159630_144159821_144172823
tx.729	chr1	-	1069	3	NNC	ENSMUSG00000009633.4	novel	871	2	NA	NA	-680	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	38.5	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTATTTAATTCTTGG	NA	False	NA	NA	False	NA	NA	NA	192956205	192954467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_192955111_192955296_192955492_192955974
tx.7290	chr2	+	906	2	FSM	ENSMUSG00000098387.3	ENSMUST00000183618.3	693	2	17	-230	17	230	multi-exon	FALSE	canonical	3	459	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCATTATTATTATTA	NA	False	NA	NA	False	NA	NA	NA	144210932	144215871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_144211078_144215110
tx.7291	chr2	+	2047	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	36	2320	6	781	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCAGCTCGTGGATTGT	633	False	NA	NA	False	NA	NA	NA	144369673	144381595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
tx.7292	chr2	-	2126	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	44	0	-35	0	multi-exon	FALSE	canonical	3	248	junction_1	20.0873094266007	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	144392745	144384184	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
tx.7293	chr2	+	2758	20	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_1	64.9806278398403	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	NA	NA	NA	144398178	144432669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
tx.7294	chr2	+	2770	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	5	4	5	-4	multi-exon	FALSE	canonical	3	154	junction_1	107.06740569791	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCAGATTTTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	144398180	144432665	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
tx.7295	chr2	+	460	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	11	0	11	0	multi-exon	FALSE	canonical	3	228	junction_1	0	204	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTGTCTTCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	144435984	144437286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_144436126_144436967
tx.7296	chr2	+	1243	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	72	35	72	-35	multi-exon	TRUE	canonical	3	290	junction_5	10.373041983912	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTTATTATTAAATTCT	NA	False	NA	NA	False	NA	NA	NA	144441888	144610643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
tx.7297	chr2	+	1019	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	16	107	0	-107	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	482	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	145745176	145758238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
tx.7298	chr2	-	2351	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	297	780	-3	-780	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTACTTGAGTCCGA	NA	False	NA	NA	False	NA	NA	NA	145776637	145760178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
tx.7299	chr2	+	2128	7	FSM	ENSMUSG00000037143.18	ENSMUST00000116398.8	1561	7	3	-570	3	570	multi-exon	TRUE	canonical	0	0	junction_4	0.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTAGTTTCTAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	145776706	145806716	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_145776761_145781759_145781912_145788965_145789117_145791838_145791916_145792678_145792747_145792977_145793105_145805217
tx.73	chr1	-	961	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	217	931	3	335	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGGGCAGGTTTCTTTT	7017	False	NA	NA	False	NA	NA	NA	36586309	36578105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
tx.730	chr1	+	2433	8	FSM	ENSMUSG00000016494.10	ENSMUST00000016638.8	2454	8	-3	24	-3	-24	multi-exon	FALSE	canonical	0	0	junction_4	1.35526185435788	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATTAAATTGATGATGA	1018	False	NA	NA	False	NA	NA	NA	194621123	194643563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_194621353_194630146_194630315_194631612_194631873_194633246_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642243
tx.7300	chr2	+	2175	14	FSM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	8	0	8	0	multi-exon	FALSE	canonical	3	86	junction_6	16.1728825562271	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCACTGTAATTAGGTGT	NA	False	NA	NA	False	NA	NA	NA	146697791	146812017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
tx.7301	chr2	+	3405	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	29	0	29	0	multi-exon	TRUE	canonical	3	956	junction_9	74.1082057489866	156	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	146854944	146919920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
tx.7302	chr2	+	1361	14	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	29	43116	29	-3403	5prime_fragment	FALSE	canonical	3	956	junction_9	69.62707084233	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGGATGAAGGTGAGT	NA	False	NA	NA	False	NA	NA	NA	146854944	146876804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773
tx.7303	chr2	+	2994	27	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	12198	0	-4358	0	3prime_fragment	FALSE	canonical	3	956	junction_6	76.5135637896117	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	3454	False	NA	NA	False	NA	NA	NA	146867113	146919920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
tx.7304	chr2	+	940	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	16	0	16	0	multi-exon	FALSE	canonical	3	586	junction_1	0	383	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	False	NA	NA	False	NA	NA	NA	148514561	148517947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_148514756_148517201
tx.7305	chr2	+	937	2	ISM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	97	8515	-91	385	5prime_fragment	FALSE	canonical	3	53	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCCAAAAGTGAGGCTT	468	False	NA	NA	False	NA	NA	NA	148523039	148526354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_148523136_148525513
tx.7306	chr2	-	768	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	92	0	-33	0	multi-exon	FALSE	canonical	3	2071	junction_1	68	1498	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	148717404	148713641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_148713964_148714736_148714851_148717072
tx.7307	chr2	+	2270	4	FSM	ENSMUSG00000074736.11	ENSMUST00000109935.8	2050	4	-272	52	-272	-52	multi-exon	FALSE	canonical	1	4	junction_1	14.290634073484	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTTGCTTACGACTTT	NA	False	NA	NA	False	NA	NA	NA	149672435	149846260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_149672846_149741337_149741896_149772824_149772963_149845096
tx.7308	chr2	+	1874	3	ISM	ENSMUSG00000074736.11	ENSMUST00000109934.2	2081	5	68574	39	68495	-39	3prime_fragment	FALSE	canonical	3	22	junction_2	8.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTTTCTTTCTGATGAA	NA	False	NA	NA	False	NA	NA	NA	149741336	149846273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_149741896_149772824_149772963_149845096
tx.7309	chr2	-	2306	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	23	1798	-7	952	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGGCGTACTT	NA	False	NA	NA	False	NA	NA	NA	149978605	149958123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
tx.731	chr1	-	1521	9	NIC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	11	-52	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	81.0361609098062	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	194813831	194781018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
tx.7310	chr2	+	827	4	FSM	ENSMUSG00000079009.9	ENSMUST00000109926.8	1728	4	14	887	14	-760	multi-exon	FALSE	canonical	3	34	junction_3	16.0485374896143	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGACCAGTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	150023688	150034312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775
tx.7311	chr2	+	2808	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	4	-15	4	15	multi-exon	FALSE	canonical	3	15	junction_1	5.35412613473634	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAGAAAAAAAAACCACTG	NA	False	NA	NA	False	NA	NA	NA	150059996	150082660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
tx.7312	chr2	+	395	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	0	2623	0	-2623	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAATGCAGAGACACCC	NA	False	NA	NA	False	NA	NA	NA	150099436	150109597	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
tx.7313	chr2	+	2098	3	NIC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	4	4	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	56.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGGGAGCATCATCC	NA	False	NA	NA	False	NA	NA	NA	150153354	150168936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_150153479_150165621_150165749_150167089
tx.7314	chr2	+	2115	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	45	-1	45	1	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTTTGGGGAGCATCA	NA	False	NA	NA	False	NA	NA	NA	150153395	150168933	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
tx.7315	chr2	-	3318	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	-46	-350	-46	350	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACTAAAGTTAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	150293452	150248710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
tx.7316	chr2	-	2340	4	FSM	ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	0	394	0	-394	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTAGGGGCAGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	150327011	150313304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
tx.7317	chr2	-	2116	9	FSM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	119	0	96	0	multi-exon	FALSE	canonical	3	74	junction_7	10.0054672554559	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	1118	False	NA	NA	False	NA	NA	NA	150450368	150424999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
tx.7318	chr2	-	2897	11	ISM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	29769	0	-374	0	3prime_fragment	FALSE	canonical	3	171	junction_6	13.1848397790796	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTTTTTGGTTGAC	4680	False	NA	NA	False	NA	NA	NA	150480409	150460024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283
tx.7319	chr2	-	3588	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	24	6	-20	-6	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	150510154	150460030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
tx.732	chr1	-	1621	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	28	2	1	-2	multi-exon	FALSE	canonical	3	104	junction_9	54.0893179933677	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTGTGTGGTTCATAC	NA	False	NA	NA	False	NA	NA	NA	194813841	194786099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
tx.7320	chr2	+	2518	14	FSM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	21	1	-18	-1	multi-exon	FALSE	canonical	3	112	junction_1	18.2695141678424	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTTGCCTCATTAGT	NA	False	NA	NA	False	NA	NA	NA	150590982	150613594	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
tx.7321	chr2	+	1097	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATCTCCTGGTAGCTT	2412	False	NA	NA	False	NA	NA	NA	150751503	150773200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
tx.7322	chr2	-	1383	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	0	11	0	-11	multi-exon	FALSE	canonical	3	184	junction_1	0	65	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCATCCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	150881318	150871615	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_150872837_150881156
tx.7323	chr2	+	1374	9	FSM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	-10	0	-7	0	multi-exon	FALSE	canonical	3	1010	junction_3	133.71979799192	632	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACCAATTCTGTTATAT	NA	False	NA	NA	False	NA	NA	NA	151336202	151353225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
tx.7324	chr2	+	1564	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	93	1	-9	-1	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	430	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	NA	False	NA	NA	NA	151384495	151403611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
tx.7325	chr2	+	1513	9	NNC	ENSMUSG00000027456.9	novel	1399	9	NA	NA	3301	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	8.04285397107271	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCCCGGTCATGAAAGT	NA	False	NA	NA	False	NA	NA	NA	151417842	151431922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_151418043_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
tx.7326	chr2	-	1343	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	17	2449	0	4	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	83	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACGCTCCTTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	151583213	151560180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
tx.7327	chr2	-	1716	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	38	0	38	0	multi-exon	FALSE	canonical	3	86	junction_1	0	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGACTCTTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	151822101	151811317	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_151812845_151821912
tx.7328	chr2	+	2693	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	-24	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTTGTGTGCTCAC	NA	False	NA	NA	False	NA	NA	NA	151838430	151851178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
tx.7329	chr2	+	2592	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	26	-28	-6	4	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTACTCTTGACTTGT	NA	False	NA	NA	False	NA	NA	NA	151841810	151851170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
tx.733	chr1	-	1337	10	NIC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	121	junction_9	50.3432661280975	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTGTGTGGTTCATAC	NA	False	NA	NA	False	NA	NA	NA	194813871	194786099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
tx.7330	chr2	+	2538	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	67	-2159	59	-6	multi-exon	FALSE	canonical	3	20	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAGCCCAACAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	151947502	151953290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_151947659_151950908
tx.7331	chr2	+	2593	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	206	13	206	-13	multi-exon	FALSE	canonical	3	134	junction_1	0	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATAGCCTTAGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	151947649	151953283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_151947868_151950908
tx.7332	chr2	+	2691	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	3	1512	3	-1512	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAGATTTAAGTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	152068761	152122260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
tx.7333	chr2	+	2806	14	NNC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	1	-1512	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	52.761493041128	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAGATTTAAGTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	152068759	152122260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_152068912_152090618_152090732_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
tx.7334	chr2	-	2194	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	166.375148384607	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	NA	False	NA	NA	NA	152174303	152158253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
tx.7335	chr2	-	2377	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	7	0	7	0	multi-exon	FALSE	canonical	3	444	junction_6	68.3604931579153	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	NA	False	NA	NA	NA	152174325	152158253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
tx.7336	chr2	-	2248	13	FSM	ENSMUSG00000027466.16	ENSMUST00000028964.14	2252	13	1	3	1	-3	multi-exon	FALSE	canonical	3	72	junction_12	150.053231295505	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAAAGGTGTCATGCT	NA	False	NA	NA	False	NA	NA	NA	152174572	152158256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
tx.7337	chr2	-	1067	5	FSM	ENSMUSG00000027466.16	ENSMUST00000130165.8	1842	5	768	7	768	-7	multi-exon	FALSE	canonical	3	483	junction_1	67.5092586242806	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAAGGGAAAGGTGTCA	NA	False	NA	NA	False	NA	NA	NA	152164149	152158260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079
tx.7338	chr2	-	2054	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	-28	0	-28	0	multi-exon	FALSE	canonical	3	926	junction_3	7.71722460186015	201	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	152185980	152179341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
tx.7339	chr2	-	1441	3	FSM	ENSMUSG00000059361.7	ENSMUST00000079278.5	1455	3	11	3	11	-3	multi-exon	FALSE	canonical	1	2	junction_2	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCAGCGTGGCTTCCTTT	8700	False	NA	NA	False	NA	NA	NA	152218547	152210677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_152211844_152216015_152216211_152218467
tx.734	chr10	+	3676	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	-5	-2	-5	2	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCTAGTAAAGCCACT	NA	False	NA	NA	False	NA	NA	NA	3923112	4106113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
tx.7340	chr2	+	1577	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	9	3618	9	16	multi-exon	FALSE	canonical	3	117	junction_7	14.82905345753	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTAGTGTTTCGTG	NA	False	NA	NA	False	NA	NA	NA	152511389	152546972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
tx.7341	chr2	+	933	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	1	0	1	0	multi-exon	FALSE	canonical	3	30	junction_1	0	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGTGACTTCTTGGA	4423	False	NA	NA	False	NA	NA	NA	152578171	152579330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_152578666_152578891
tx.7342	chr2	+	764	5	FSM	ENSMUSG00000009876.14	ENSMUST00000010020.12	727	5	-40	3	-40	0	multi-exon	FALSE	canonical	2	9	junction_4	3.69966214673719	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTTTGGACTATCTGT	NA	False	NA	NA	False	NA	NA	NA	152596052	152606954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_152596145_152597074_152597160_152598929_152599095_152602557_152602690_152606664
tx.7343	chr2	-	2523	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	49	-4	1	0	multi-exon	FALSE	canonical	3	144	junction_2	91.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	False	NA	NA	False	NA	NA	NA	152672537	152622587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_152624203_152671346_152672023_152672305
tx.7344	chr2	-	2399	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	18	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	89.5	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	False	NA	NA	False	NA	NA	NA	152673630	152622587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_152624203_152671346_152672023_152673522
tx.7345	chr2	-	2420	3	NIC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	148	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCTCTGCGCCGCAT	NA	False	NA	NA	False	NA	NA	NA	152673628	152622582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_152624203_152671346_152672041_152673522
tx.7346	chr2	+	2802	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	46	635	29	-635	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2754	False	NA	NA	False	NA	NA	NA	152689943	152735939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
tx.7347	chr2	+	3002	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	35	617	35	-617	multi-exon	FALSE	canonical	3	159	junction_1	172.681016802699	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAGTGAGAAGCAGCCA	2760	False	NA	NA	False	NA	NA	NA	152689949	152735957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
tx.7348	chr2	-	1081	4	ISM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	1340	0	1255	0	3prime_fragment	FALSE	canonical	3	235	junction_2	4.89897948556636	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	9979	False	NA	NA	False	NA	NA	NA	152856007	152850809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929
tx.7349	chr2	-	1235	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	38	0	-12	0	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	134	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	8677	False	NA	NA	False	NA	NA	NA	152857309	152850809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
tx.735	chr10	+	3558	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	-21	-2	5	2	multi-exon	FALSE	canonical	3	127	junction_27	66.4418431300526	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCTAGTAAAGCCACT	NA	False	NA	NA	False	NA	NA	NA	3923122	4106113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
tx.7350	chr2	+	2048	13	FSM	ENSMUSG00000003283.16	ENSMUST00000189688.2	2090	13	35	7	35	-7	multi-exon	FALSE	canonical	3	76	junction_9	8.17346655682615	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCCAAGGGTCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	152950422	152993352	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
tx.7351	chr2	+	3650	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	238	8	0	-8	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGAATGCAAGGGTGCG	NA	False	NA	NA	False	NA	NA	NA	153003460	153052378	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
tx.7352	chr2	+	1538	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-25	4087	-25	248	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTGTGTGTGTATG	NA	False	NA	NA	False	NA	NA	NA	153083427	153108080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
tx.7353	chr2	+	1772	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-5	3833	-5	-89	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCCTTTGTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	153083447	153108334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
tx.7354	chr2	-	1290	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	27	1893	-14	8	multi-exon	FALSE	canonical	3	166	junction_3	11.9373363863133	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTGAATCCACAAAATGT	NA	False	NA	NA	False	NA	NA	NA	153474674	153460745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
tx.7355	chr2	+	2540	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	43	4753	43	-4753	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	291	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCCTGTCTTCTGAAA	NA	False	NA	NA	False	NA	NA	NA	153583236	153610477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
tx.7356	chr2	+	3530	3	ISM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	18696	4748	14577	-4748	3prime_fragment	FALSE	canonical	3	1060	junction_1	94.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	727	False	NA	NA	False	NA	NA	NA	153601889	153610482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_153603578_153606866_153607020_153608793
tx.7357	chr2	+	1641	15	FSM	ENSMUSG00000038572.8	ENSMUST00000045959.8	1637	15	-4	0	-4	0	multi-exon	FALSE	canonical	3	25	junction_6	7.50951777032701	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGAGTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	154065657	154082822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154070773_154070859_154070950_154071015_154071386_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677_154078742_154080747_154080828_154082671
tx.7358	chr2	-	1984	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	-8	-6	4	0	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	60	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTACTTTTTTCA	5672	False	NA	NA	False	NA	NA	NA	154214647	154177299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
tx.7359	chr2	+	629	2	ISM	ENSMUSG00000038533.16	ENSMUST00000099178.10	3247	9	0	25538	0	-3902	5prime_fragment	FALSE	canonical	3	587	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGGCAACCCCTTGGA	5306	False	NA	NA	False	NA	NA	NA	154278403	154342795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_154278557_154342319
tx.736	chr10	+	1160	6	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	116243	2	57081	-2	3prime_fragment	FALSE	canonical	3	315	junction_5	67.5911236775954	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	4039360	4106109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
tx.7360	chr2	-	1848	13	FSM	ENSMUSG00000027489.16	ENSMUST00000000895.13	1829	13	-12	-7	12	7	multi-exon	TRUE	canonical	3	34	junction_6	10.0840220150494	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTGTCTCTTGTCTGT	7299	False	NA	NA	False	NA	NA	NA	154400798	154386311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
tx.7361	chr2	-	1895	13	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	11.513277359447	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCCTGTCTCTTGTCTG	7287	False	NA	NA	False	NA	NA	NA	154400810	154386312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388837_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
tx.7362	chr2	-	1188	12	NIC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	-5	-73	intron_retention	FALSE	canonical	3	34	junction_5	10.4470328738723	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCAGCCCTGCCTATCA	7320	False	NA	NA	False	NA	NA	NA	154400777	154387037	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
tx.7363	chr2	-	1329	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	-1	1461	-1	-1461	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTTTGAGATGCATT	NA	False	NA	NA	False	NA	NA	NA	154445629	154429138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
tx.7364	chr2	+	376	2	NNC	ENSMUSG00000059842.13	novel	3000	14	NA	NA	-57	-27370	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTAGTTTTATGGTTTT	5665	False	NA	NA	False	NA	NA	NA	154455159	154461328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_154455323_154461115
tx.7365	chr2	+	1538	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	76	2	76	-2	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCTGTGTGTTCAGTCA	NA	False	NA	NA	False	NA	NA	NA	154499013	154536703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
tx.7366	chr2	+	1494	9	NIC	ENSMUSG00000027593.16	novel	1747	9	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	44.2965856472031	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGAGGTGGAATGGTT	NA	False	NA	NA	False	NA	NA	NA	154632997	154709166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_154633152_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
tx.7367	chr2	+	1411	8	NIC	ENSMUSG00000027593.16	novel	1709	8	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	53.0813776484863	15	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGAGGTGGAATGGTT	NA	False	NA	NA	False	NA	NA	NA	154632997	154709166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_154633152_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
tx.7368	chr2	+	1139	7	ISM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	66228	17	65670	0	3prime_fragment	FALSE	canonical	3	130	junction_4	14.6363322667334	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGAGGTGGAATGG	5089	False	NA	NA	False	NA	NA	NA	154699304	154709164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
tx.7369	chr2	+	619	3	ISM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	72674	17	72116	0	3prime_fragment	FALSE	canonical	3	166	junction_1	0	29	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGAGGTGGAATGG	NA	False	NA	NA	False	NA	NA	NA	154705750	154709164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_154705970_154707827_154707877_154708813
tx.737	chr10	+	1052	6	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	116217	2	57081	-2	3prime_fragment	FALSE	canonical	3	127	junction_5	140.137932052674	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	4039360	4106109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
tx.7370	chr2	-	1441	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	82	1019	-22	-1011	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	5340	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCGATCTGTCCTTCAG	3714	False	NA	NA	False	NA	NA	NA	154734773	154714348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
tx.7371	chr2	-	1857	4	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	10222	14	10172	-14	intron_retention	FALSE	canonical	3	1013	junction_2	85.7943277068284	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGGCTAAAAGCTGGT	NA	False	NA	NA	False	NA	NA	NA	154906195	154901243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908
tx.7372	chr2	-	1418	5	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	10218	380	10168	-380	3prime_fragment	FALSE	canonical	3	1013	junction_2	97.2763460456857	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCATGTATGTGGCTG	NA	False	NA	NA	False	NA	NA	NA	154906199	154901609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073
tx.7373	chr2	-	2122	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	41	380	-9	-380	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCATGTATGTGGCTG	NA	False	NA	NA	False	NA	NA	NA	154916376	154901609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
tx.7374	chr2	+	2515	4	ISM	ENSMUSG00000027598.17	ENSMUST00000138468.8	3711	6	-6	6185	-6	-3327	5prime_fragment	FALSE	canonical	3	145	junction_2	29.7694847490215	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAAACTTATGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	154975437	155012882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603
tx.7375	chr2	+	658	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	22	4	22	1	multi-exon	FALSE	canonical	3	1428	junction_1	142.385236438177	603	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTGTGTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	155078476	155092193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
tx.7376	chr2	+	833	3	FSM	ENSMUSG00000027602.10	ENSMUST00000154596.2	826	3	-3	-4	-3	-1	multi-exon	FALSE	canonical	3	438	junction_2	23	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCCAGCTGCTTG	NA	False	NA	NA	False	NA	NA	NA	155118805	155119992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_155118934_155119017_155119125_155119394
tx.7377	chr2	-	1753	9	ISM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	12003	6	288	-6	3prime_fragment	FALSE	canonical	3	12	junction_1	4.30116263352131	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGACTCTGGCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	155344765	155332304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555
tx.7378	chr2	+	2845	18	FSM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	86	0	1	0	multi-exon	FALSE	canonical	2	49	junction_8	8.02030295659528	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTTTTAGGTATCTG	2093	False	NA	NA	False	NA	NA	NA	155359953	155404666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
tx.7379	chr2	-	1910	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	53	0	-30	0	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	274	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTGTTTCATGTAC	8403	False	NA	NA	False	NA	NA	NA	155434677	155405100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
tx.738	chr10	-	1846	13	FSM	ENSMUSG00000019763.12	ENSMUST00000042251.11	3139	13	37	1256	-7	0	multi-exon	FALSE	canonical	3	107	junction_3	17.5220099684178	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTTCAGCTCTTAAT	5699	False	NA	NA	False	NA	NA	NA	4382351	4353170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
tx.7380	chr2	-	3046	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	146	12	94	-12	multi-exon	TRUE	canonical	3	309	junction_12	37.6501520663235	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATGTGGACCTGACTT	NA	False	NA	NA	False	NA	NA	NA	155534158	155476202	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
tx.7381	chr2	-	1887	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	56	347	56	-347	multi-exon	TRUE	canonical	3	287	junction_6	17.8672885463911	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACATGCTGGATTCT	NA	False	NA	NA	False	NA	NA	NA	155571339	155543943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
tx.7382	chr2	-	1443	2	FSM	ENSMUSG00000074649.7	ENSMUST00000124586.2	1615	2	172	0	172	0	multi-exon	FALSE	canonical	3	10	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGTACAAACCTATGAAT	7271	False	NA	NA	False	NA	NA	NA	155661174	155659649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155661004_155661085
tx.7383	chr2	-	1266	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	229	5	-33	0	multi-exon	TRUE	canonical	3	1052	junction_5	244.745255316625	1322	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGTGCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	155668616	155661756	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
tx.7384	chr2	-	2218	8	ISM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	18525	-27	-1181	0	3prime_fragment	FALSE	canonical	3	315	junction_1	43.4229319646677	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	NA	False	NA	NA	False	NA	NA	NA	155753705	155688813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660
tx.7385	chr2	-	2405	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	255	-27	1	0	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	NA	False	NA	NA	False	NA	NA	NA	155771975	155688813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
tx.7386	chr2	-	2414	10	FSM	ENSMUSG00000005882.19	ENSMUST00000136933.8	2413	10	-4	3	-4	-1	multi-exon	FALSE	canonical	3	22	junction_7	134.914879429061	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCTCCTGGAATGGAT	NA	False	NA	NA	False	NA	NA	NA	155771984	155688816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752388_155753660_155753757_155763554_155763648_155771932
tx.7387	chr2	+	1325	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	52	0	-9	0	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	581	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	NA	False	NA	NA	NA	155850016	155860199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
tx.7388	chr2	+	1213	12	NIC	ENSMUSG00000038180.12	novel	747	9	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.06486846443059	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGTTTGTGCTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	155907637	155911421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_155907806_155908053_155908159_155908486_155908554_155908724_155908787_155909008_155909053_155909231_155909258_155909374_155909484_155909666_155909743_155909856_155909973_155910290_155910459_155911056_155911147_155911239
tx.7389	chr2	-	3466	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	-21	-4	-1	1	multi-exon	FALSE	canonical	3	257	junction_15	28.8510350286124	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCGCTCTTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	155953880	155913760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
tx.739	chr10	-	2522	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	18	-768	8	768	multi-exon	FALSE	canonical	3	145	junction_2	8	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTCCAATGTCTGTT	5724	False	NA	NA	False	NA	NA	NA	4382326	4375325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_4377692_4379076_4379172_4382265
tx.7390	chr2	-	3677	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	34	2924	-6	2603	multi-exon	FALSE	canonical	3	132	junction_2	80.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTATGTACCTTTAT	NA	False	NA	NA	False	NA	NA	NA	155953842	155936801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155940293_155945268_155945318_155953705
tx.7391	chr2	-	3726	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	15	2926	15	2601	multi-exon	FALSE	canonical	3	245	junction_2	24	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATTGTATGTACCTTT	NA	False	NA	NA	False	NA	NA	NA	155953861	155936803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155940293_155945268_155945350_155953705
tx.7392	chr2	-	1209	6	ISM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	15590	1	11213	-1	3prime_fragment	TRUE	canonical	3	228	junction_1	22.1684460438706	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCCTTGAATTTTTGAG	8939	False	NA	NA	False	NA	NA	NA	155970516	155965559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357
tx.7393	chr2	-	2039	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	2	10	2	1	multi-exon	FALSE	canonical	3	228	junction_1	23.0952135493242	132	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTCCTGATCCTTGA	3108	False	NA	NA	False	NA	NA	NA	155986104	155965568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
tx.7394	chr2	-	714	3	FSM	ENSMUSG00000027618.18	ENSMUST00000109600.2	709	3	-4	-1	2	1	multi-exon	FALSE	canonical	3	275	junction_2	22	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGCGGGTCAATGGGACA	3108	False	NA	NA	False	NA	NA	NA	155986104	155983705	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155984163_155985286_155985379_155985939
tx.7395	chr2	+	394	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	172	3	-22	0	multi-exon	FALSE	canonical	3	748	junction_1	118.5	309	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	6523	False	NA	NA	False	NA	NA	NA	155986130	155987714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_155986201_155986378_155986510_155987521
tx.7396	chr2	+	530	2	FSM	ENSMUSG00000067847.14	ENSMUST00000109597.10	550	2	20	0	13	0	multi-exon	FALSE	canonical	3	985	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	6565	False	NA	NA	False	NA	NA	NA	155986172	155987714	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_155986510_155987521
tx.7397	chr2	-	2756	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	46	8	4	-1	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	295	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAATTTTCGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	156022112	155989166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
tx.7398	chr2	-	2844	18	FSM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	-31	-693	5	-1	multi-exon	FALSE	canonical	3	383	junction_15	717.627699835322	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAATTTTCGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	156022127	155989166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
tx.7399	chr2	-	424	3	ISM	ENSMUSG00000027620.17	ENSMUST00000109584.8	667	4	42	2562	0	25	5prime_fragment	FALSE	canonical	3	1623	junction_1	363	289	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGACTAAGGAACC	NA	False	NA	NA	False	NA	NA	NA	156022116	156019255	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_156019306_156021096_156021161_156021806
tx.74	chr1	-	2268	15	FSM	ENSMUSG00000046337.18	ENSMUST00000170295.8	2286	15	12	6	12	-2	multi-exon	FALSE	canonical	3	61	junction_5	44.2795502622663	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGTTCTGGAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	36722252	36601778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
tx.740	chr10	+	2289	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	139	1	-14	0	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	4382605	4405140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
tx.7400	chr2	+	1747	11	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	96	17402	4	22	5prime_fragment	FALSE	canonical	3	289	junction_1	26.5510828404417	147	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCAAGCCTGGTATTT	NA	False	NA	NA	False	NA	NA	NA	156038657	156134470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385
tx.7401	chr2	+	1659	10	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	99	21873	7	-4449	5prime_fragment	FALSE	canonical	3	289	junction_1	25.954851588627	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATCTTGGCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	156038660	156129999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720
tx.7402	chr2	+	3565	21	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-23	863	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	20.7663188841932	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	7757	False	NA	NA	False	NA	NA	NA	156262944	156382769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
tx.7403	chr2	+	2621	4	FSM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	-8	814	4	2	multi-exon	FALSE	canonical	3	133	junction_3	2.16024689946929	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTGTGTGAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	156389507	156410078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_156389804_156392568_156393370_156397746_156397977_156408784
tx.7404	chr2	+	1601	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	-25	19	-11	-19	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAATTAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	156562939	156605025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
tx.7405	chr2	+	441	2	ISM	ENSMUSG00000061689.16	ENSMUST00000177013.8	616	3	-35	2957	-6	-2879	5prime_fragment	FALSE	canonical	3	183	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTTCTGTCTACTCT	NA	False	NA	NA	False	NA	NA	NA	156562944	156588132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_156563008_156587754
tx.7406	chr2	+	1633	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9321	5	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTTTCTCACCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	156572732	156604880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
tx.7407	chr2	-	523	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	-4	59871	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	67.4009561422454	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCATAGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	156681816	156615097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_156615230_156679742_156679834_156680337_156680457_156681635
tx.7408	chr2	+	2851	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	49	0	-44	0	multi-exon	FALSE	canonical	3	217	junction_2	7.5	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	156681975	156697490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_156682159_156686075_156686302_156695048
tx.7409	chr2	+	2697	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	156682012	156697490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
tx.741	chr10	-	1776	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	166	-2	166	2	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	284	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTGCAGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	5755434	5749157	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
tx.7410	chr2	+	2762	3	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-25	0	intron_retention	FALSE	canonical	3	38	junction_1	89.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	156682916	156697490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_156683011_156686075_156686302_156695048
tx.7411	chr2	-	1371	3	NNC	ENSMUSG00000085741.9	novel	1196	3	NA	NA	7	38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATATTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	156704858	156694311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_156694611_156695350_156695939_156704374
tx.7412	chr2	+	578	2	ISM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	9283	0	-131	0	3prime_fragment	FALSE	canonical	3	1366	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGCATGCCTGGTA	NA	False	NA	NA	False	NA	NA	NA	156714330	156715483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_156714388_156714962
tx.7413	chr2	-	2656	17	FSM	ENSMUSG00000027634.15	ENSMUST00000069600.13	2612	17	-44	0	-31	0	multi-exon	FALSE	canonical	3	9	junction_1	53.8324948335111	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5883	False	NA	NA	False	NA	NA	NA	156834007	156769264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_156770802_156771851_156771891_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
tx.7414	chr2	-	2635	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	-49	0	-49	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5865	False	NA	NA	False	NA	NA	NA	156834025	156769264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
tx.7415	chr2	-	4053	11	FSM	ENSMUSG00000082163.3_ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	0	-1973	0	881	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATCATGTAATAAAAT	8134	False	NA	NA	False	NA	NA	NA	156848995	156835211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
tx.7416	chr2	-	1968	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	97	1861	38	7	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCGGTTAGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	156977088	156941313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
tx.7417	chr2	-	2127	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	-89	-2	-3	2	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATATCTGCGGTTAGTT	NA	False	NA	NA	False	NA	NA	NA	156977129	156941318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
tx.7418	chr2	-	2324	15	ISM	ENSMUSG00000027641.14	ENSMUST00000154721.8	2715	16	0	2811	0	-2811	5prime_fragment	FALSE	canonical	3	55	junction_2	35.4011991034087	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTCTGTATTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	157046454	157011708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
tx.7419	chr2	-	2395	13	FSM	ENSMUSG00000027641.14	ENSMUST00000124518.2	2383	13	-8	-4	0	4	multi-exon	FALSE	canonical	3	92	junction_1	21.3559450478992	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGTATACATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	157046454	157016901	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
tx.742	chr10	-	1854	3	ISM	ENSMUSG00000019795.18	ENSMUST00000161123.8	2607	9	23133	7	9024	1	3prime_fragment	FALSE	canonical	3	339	junction_1	213	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGTCTGGATCCTTG	NA	False	NA	NA	False	NA	NA	NA	7515895	7505143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_7506741_7513819_7513990_7515808
tx.7420	chr2	+	2484	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	10	262	10	1	multi-exon	TRUE	canonical	3	1870	junction_1	194.730412606121	324	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	157120988	157167977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
tx.7421	chr2	+	1092	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	15	0	15	0	multi-exon	FALSE	canonical	3	219	junction_1	136	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTGTTGCTACTG	5232	False	NA	NA	False	NA	NA	NA	157209528	157238683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_157209561_157220968_157221175_157237829
tx.7422	chr2	-	2056	2	FSM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	121	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	NA	False	NA	NA	False	NA	NA	NA	157408257	157398281	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_157400248_157408167
tx.7423	chr2	-	712	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	-83	0	83	multi-exon	FALSE	canonical	3	113	junction_1	0	127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTGGTGGGAAGAAAGA	8707	False	NA	NA	False	NA	NA	NA	157439240	157437419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_157437906_157439014
tx.7424	chr2	-	706	2	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	80	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	25	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCTGTGGTGGGAAGAA	8707	False	NA	NA	False	NA	NA	NA	157439240	157437422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_157437903_157439014
tx.7425	chr2	+	1879	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	40	523	40	-523	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	405	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGCTGACATTGTAT	NA	False	NA	NA	False	NA	NA	NA	157579360	157733011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
tx.7426	chr2	-	2005	2	Antisense	novelGene_ENSMUSG00000027649.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATAACTGGTACCTGCTG	NA	False	NA	NA	False	NA	NA	NA	157693928	157689535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_-_157691310_157693697
tx.7427	chr2	-	1961	2	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	23	-12942	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGTTTTCATGTTTG	NA	False	NA	NA	False	NA	NA	NA	157870330	157863631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_157865556_157870293
tx.7428	chr2	+	3624	7	FSM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	-228	887	-4	-887	multi-exon	FALSE	canonical	3	131	junction_3	20.3749573960018	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	157870412	157919240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
tx.7429	chr2	-	2053	4	ISM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	22111	0	15411	0	3prime_fragment	FALSE	canonical	3	175	junction_1	15.084944665313	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGCCTTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	157966245	157958321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040
tx.743	chr10	-	1668	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	13	810	13	-810	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGGCCTTTGAATC	NA	False	NA	NA	False	NA	NA	NA	7539054	7505954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
tx.7430	chr2	-	1741	9	ISM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	44	10403	1	540	5prime_fragment	FALSE	canonical	3	151	junction_4	21.3248681121361	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAAGAA	8850	False	NA	NA	False	NA	NA	NA	157988312	157968724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
tx.7431	chr2	-	2939	6	FSM	ENSMUSG00000085385.8	ENSMUST00000133449.8	933	6	55	-2061	-3	-4	multi-exon	FALSE	canonical	2	8	junction_3	32.8048776861003	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTTGGTCTCGTGAGT	8344	False	NA	NA	False	NA	NA	NA	158203445	158195623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_158197962_158199117_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
tx.7432	chr2	-	983	6	NIC	ENSMUSG00000085385.8	novel	933	6	NA	NA	-1	6	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.4059821413245	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8326	False	NA	NA	False	NA	NA	NA	158203463	158197698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158202991_158203324
tx.7433	chr2	+	2270	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	-4	0	-4	0	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	402	False	NA	NA	False	NA	NA	NA	158610008	158628557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
tx.7434	chr2	+	2064	11	ISM	ENSMUSG00000027655.15	ENSMUST00000145692.8	3249	22	36925	2	4369	-2	3prime_fragment	TRUE	canonical	3	91	junction_4	8.0628778981205	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTTCTCCTGTCTGT	5609	False	NA	NA	False	NA	NA	NA	158673706	158700132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
tx.7435	chr2	+	2884	3	NNC	ENSMUSG00000027655.15	novel	3212	21	NA	NA	-1027	1393	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	52	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGCCAGCCAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	158691521	158701527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_158691766_158693630_158693743_158698999
tx.7436	chr2	-	954	2	NNC	ENSMUSG00000078956.4	novel	340	3	NA	NA	-36274	774	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAAGTGTGTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	160498165	160409524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_160410363_160498049
tx.7437	chr2	+	3766	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	90	0	-2	0	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	160487897	160564684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
tx.7438	chr2	+	1232	11	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	91	19070	-1	15	5prime_fragment	FALSE	canonical	3	359	junction_7	35.6084259691439	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATCGTCTGCTAAACT	NA	False	NA	NA	False	NA	NA	NA	160487898	160545614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491
tx.7439	chr2	-	280	2	Antisense	novelGene_ENSMUSG00000070544.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAGAATCTGAAATCTT	NA	False	NA	NA	False	NA	NA	NA	160498194	160493074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_-_160493189_160498028
tx.744	chr10	-	1618	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	318	821	13	-813	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCATTGGTGGCCTTTGA	NA	False	NA	NA	False	NA	NA	NA	7539054	7505957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
tx.7440	chr2	-	1159	7	ISM	ENSMUSG00000057133.15	ENSMUST00000138078.8	3092	17	-12	21803	-12	2	5prime_fragment	FALSE	canonical	3	60	junction_4	13.7931142241337	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGGTCTTCTATATTT	NA	False	NA	NA	False	NA	NA	NA	160951007	160871756	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
tx.7441	chr2	-	2292	2	ISM	ENSMUSG00000057133.15	ENSMUST00000125179.2	5051	5	-69	22737	2	-22737	5prime_fragment	FALSE	canonical	3	82	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	160950993	160899687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_160901895_160950908
tx.7442	chr2	+	1355	4	ISM	ENSMUSG00000016921.15	ENSMUST00000193611.6	2897	5	1898	-140	1765	140	3prime_fragment	FALSE	canonical	3	867	junction_3	54.1376845541891	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTTTGTGCTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	162775345	162777268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_162775471_162775573_162775783_162776147_162776232_162776331
tx.7443	chr2	+	1648	5	ISM	ENSMUSG00000017868.17	ENSMUST00000018012.14	2693	14	11858	-7	1076	7	3prime_fragment	FALSE	canonical	3	12	junction_3	4.54835134966506	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTATGGTTGCCTCAAC	NA	False	NA	NA	False	NA	NA	NA	162841107	162856054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_162841189_162845191_162845288_162846066_162846223_162848713_162848804_162854829
tx.7444	chr2	+	2129	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	114	5	-23	-5	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	NA	False	NA	NA	NA	162859387	162888056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
tx.7445	chr2	+	1993	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-17	-5	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	106.160567612002	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	NA	False	NA	NA	NA	162859393	162888056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
tx.7446	chr2	+	1597	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9551	-5	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	144.162963343572	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	NA	False	NA	NA	NA	162873913	162888056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
tx.7447	chr2	+	2669	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-71	981	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	809.068256568618	11	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	162896535	162925600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
tx.7448	chr2	+	2563	14	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-178	976	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	819.254105843131	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	NA	NA	NA	162901090	162925595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_162901178_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
tx.7449	chr2	+	2398	11	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	7682	1013	3020	976	3prime_fragment	FALSE	canonical	3	2736	junction_5	164.584932481683	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	NA	NA	NA	162904288	162925595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
tx.745	chr10	-	1158	7	FSM	ENSMUSG00000019795.18	ENSMUST00000163085.8	1132	7	-29	3	13	-3	multi-exon	FALSE	canonical	3	667	junction_3	37.7491721763537	313	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCATCATTCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	7539054	7513496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
tx.7450	chr2	+	2156	10	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	9654	1013	-3871	976	3prime_fragment	FALSE	canonical	3	2736	junction_4	170.382576052313	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	NA	NA	NA	162906260	162925595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
tx.7451	chr2	+	1836	8	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	17937	1013	-2121	976	3prime_fragment	FALSE	canonical	3	2736	junction_2	181.124942782487	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	NA	NA	NA	162914543	162925595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
tx.7452	chr2	+	1461	7	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	19779	1013	-279	976	3prime_fragment	FALSE	canonical	3	2736	junction_1	195.581753295706	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	NA	NA	NA	162916385	162925595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
tx.7453	chr2	-	760	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1757	-2	multi-exon	FALSE	canonical	3	735	junction_1	0	472	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTCCGGGCTGTGCTGGTT	912	False	NA	NA	False	NA	NA	NA	162931532	162928955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr2_-_162929642_162931458
tx.7454	chr2	-	886	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1757	-2	multi-exon	FALSE	canonical	3	698	junction_1	0	483	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTCCGGGCTGTGCTGGTT	912	False	NA	NA	False	NA	NA	NA	162931532	162928955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr2_-_162929768_162931458
tx.7455	chr2	-	1628	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	233	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTGTGTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	163261456	163247741	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
tx.7456	chr2	-	3505	3	NNC	ENSMUSG00000048486.7	novel	3967	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCGGAGTTTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	163314549	163308298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_163310334_163310795_163312039_163314322
tx.7457	chr2	-	1856	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	-55	2166	-55	-2166	multi-exon	FALSE	canonical	3	58	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATTCTTGGCTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	163314604	163310464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_163312039_163314322
tx.7458	chr2	-	1010	2	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	18788	1389	18782	-1389	3prime_fragment	FALSE	canonical	3	577	junction_1	0	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTTGTGTATTTG	4389	False	NA	NA	False	NA	NA	NA	163468263	163466580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_163467500_163468172
tx.7459	chr2	-	2272	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	22	1389	16	-1389	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	595	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTTGTGTATTTG	NA	False	NA	NA	False	NA	NA	NA	163487029	163466580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
tx.746	chr10	+	1289	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	2	-5	2	5	multi-exon	FALSE	canonical	3	1090	junction_2	84.4680835751418	637	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCTTGCTGCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	7543268	7554650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
tx.7460	chr2	+	1012	4	FSM	ENSMUSG00000035268.15	ENSMUST00000064703.13	1036	4	23	1	7	1	multi-exon	FALSE	canonical	3	323	junction_1	29.6348143611905	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTATGATCTTTTCTT	8626	False	NA	NA	False	NA	NA	NA	163500341	163568073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_163500413_163545405_163545476_163563047_163563222_163567376
tx.7461	chr2	+	942	3	FSM	ENSMUSG00000035268.15	ENSMUST00000164399.8	983	3	36	5	7	1	multi-exon	FALSE	canonical	3	64	junction_1	157.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTATGATCTTTTCTT	8626	False	NA	NA	False	NA	NA	NA	163500341	163568073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_163500413_163563047_163563222_163567376
tx.7462	chr2	-	1454	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	11	223	11	-223	multi-exon	FALSE	canonical	3	45	junction_1	12.1526108476007	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGGTGAATATGGTCT	NA	False	NA	NA	False	NA	NA	NA	163592148	163568726	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
tx.7463	chr2	+	2401	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	237	375	237	-375	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCCACAAAAAAAATCTCT	NA	False	NA	NA	False	NA	NA	NA	163837116	163860133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
tx.7464	chr2	+	1992	5	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	16880	377	16337	-377	3prime_fragment	FALSE	canonical	3	1292	junction_2	145.279902257676	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCCACAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	163853759	163860131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
tx.7465	chr2	-	1860	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	63	0	-4	0	multi-exon	FALSE	canonical	3	532	junction_3	35.0606617165164	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	5944	False	NA	NA	False	NA	NA	NA	163913026	163895459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
tx.7466	chr2	+	1276	10	ISM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	5	37497	5	-342	5prime_fragment	FALSE	canonical	3	214	junction_9	13.5819415328763	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAAAATCAGATCAA	NA	False	NA	NA	False	NA	NA	NA	163916062	163959947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888
tx.7467	chr2	+	1927	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	5	3300	5	-3300	multi-exon	FALSE	canonical	3	214	junction_9	12.953763931769	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTGTCTCTGTACAG	NA	False	NA	NA	False	NA	NA	NA	163916062	163994144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
tx.7468	chr2	+	588	2	ISM	ENSMUSG00000018209.16	ENSMUST00000137866.2	694	3	690	0	690	0	3prime_fragment	FALSE	canonical	3	214	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTTTCCTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	163942329	163960289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_163942517_163959888
tx.7469	chr2	-	495	3	FSM	ENSMUSG00000051769.3	ENSMUST00000063251.3	488	3	-9	2	-9	-2	multi-exon	FALSE	canonical	3	20	junction_2	2.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCCTATGTAATAACTGT	NA	False	NA	NA	False	NA	NA	NA	164042059	164040784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_164040933_164041577_164041737_164041871
tx.747	chr10	+	1768	11	FSM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	6	0	-2	0	multi-exon	TRUE	canonical	3	353	junction_4	21.6323831327018	290	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	NA	False	NA	NA	NA	7601769	7638913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
tx.7470	chr2	-	2450	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	8	0	-8	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	128	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCAGCCTGTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	164285106	164266174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
tx.7471	chr2	+	732	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	117	0	-3	0	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	405	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	230	False	NA	NA	False	NA	NA	NA	164404615	164410430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
tx.7472	chr2	+	446	3	NIC	ENSMUSG00000074593.12	novel	443	4	NA	NA	-5	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCAAAATTCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	164557219	164559995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_164557395_164558914_164559085_164559894
tx.7473	chr2	+	292	3	NNC	ENSMUSG00000074593.12	novel	443	4	NA	NA	1234	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAATTCAAAATTCTTG	718	False	NA	NA	False	NA	NA	NA	164558458	164559992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_164558483_164558914_164559085_164559894
tx.7474	chr2	+	893	10	ISM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	8171	383	15	-383	3prime_fragment	FALSE	canonical	3	563	junction_7	42.9653894589357	144	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGTGAGCCTGCTATAAT	NA	False	NA	NA	False	NA	NA	NA	164596073	164610144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
tx.7475	chr2	+	746	5	FSM	ENSMUSG00000017299.14	ENSMUST00000135458.2	560	5	23	-209	23	209	multi-exon	FALSE	canonical	3	592	junction_3	38.3699100858993	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGTATTGTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	164596081	164601688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171
tx.7476	chr2	+	932	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	31	4	26	-4	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	1148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTTTCTCAAGTTA	NA	False	NA	NA	False	NA	NA	NA	164611848	164614823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
tx.7477	chr2	+	1543	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	14	1033	-12	153	multi-exon	FALSE	canonical	3	13	junction_2	6.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCTCTTTATTGTATGT	NA	False	NA	NA	False	NA	NA	NA	164627924	164634697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164628245_164628617_164628776_164633632
tx.7478	chr2	-	1103	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	49	0	-11	0	multi-exon	TRUE	canonical	3	284	junction_4	26.9250812440743	453	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8215	False	NA	NA	False	NA	NA	NA	164646753	164634687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
tx.7479	chr2	+	2376	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	327	2	0	-2	multi-exon	FALSE	canonical	3	571	junction_1	0	184	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCGTGTCTTGTCTGGTT	8854	False	NA	NA	False	NA	NA	NA	164664932	164668789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164665121_164666601
tx.748	chr10	-	1543	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	-9	-9	-9	0	multi-exon	TRUE	canonical	3	252	junction_3	35.482102415679	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	7480	False	NA	NA	False	NA	NA	NA	7656664	7643710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
tx.7480	chr2	+	1821	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	904	1448	-2	-435	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	297	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	NA	False	NA	NA	NA	164675724	164681504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
tx.7481	chr2	-	1912	15	FSM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	314	0	314	0	multi-exon	FALSE	canonical	3	336	junction_14	23.0625812315366	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	164699148	164681437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
tx.7482	chr2	-	1773	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	34	2	34	-2	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	249	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGGTTTCTCTAGCTC	NA	False	NA	NA	False	NA	NA	NA	164699597	164681439	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
tx.7483	chr2	+	510	2	FSM	ENSMUSG00000039849.7	ENSMUST00000145327.2	611	2	64	37	11	-37	multi-exon	FALSE	canonical	3	441	junction_1	0	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATGATGTCGTTAACAA	5960	False	NA	NA	False	NA	NA	NA	164721287	164725082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164721410_164724694
tx.7484	chr2	+	2692	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	11	3077	11	-3077	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGAGGGTCTTGGGGC	5960	False	NA	NA	False	NA	NA	NA	164721287	164733297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
tx.7485	chr2	+	682	2	NNC	ENSMUSG00000039849.7	novel	611	2	NA	NA	11	-37	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATGATGTCGTTAACAA	5960	False	NA	NA	False	NA	NA	NA	164721287	164725082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_164721582_164724694
tx.7486	chr2	+	1666	9	FSM	ENSMUSG00000017652.17	ENSMUST00000017799.12	2986	9	14	1306	5	-12	multi-exon	FALSE	canonical	3	6	junction_1	6.06217782649107	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTACAATAAGCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	164897560	164913562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_164897679_164904205_164904285_164904580_164904707_164904941_164905089_164905387_164905482_164908422_164908485_164911548_164911636_164911736_164911769_164912641
tx.7487	chr2	-	1977	10	NIC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	0	5	intron_retention	TRUE	canonical	3	63	junction_9	61.9452167365908	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGACTACCAGTGCC	5693	False	NA	NA	False	NA	NA	NA	165129756	165118468	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129703
tx.7488	chr2	-	2030	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109298.8	1991	10	-36	-3	-19	3	multi-exon	FALSE	canonical	2	10	junction_9	78.2020175926143	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGGAGACTACCAGTG	5738	False	NA	NA	False	NA	NA	NA	165129711	165118470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129603
tx.7489	chr2	-	1921	9	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	4153	0	-2	0	3prime_fragment	FALSE	canonical	3	229	junction_4	16.0657827384787	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	9927	False	NA	NA	False	NA	NA	NA	165125522	165118473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168
tx.749	chr10	+	2871	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	28	572	-2	-572	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	75	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTTACTTTTTTCTT	1150	False	NA	NA	False	NA	NA	NA	7668682	7698327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
tx.7490	chr2	-	1977	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	31	0	0	0	multi-exon	FALSE	canonical	3	110	junction_9	47.7596864973064	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5691	False	NA	NA	False	NA	NA	NA	165129758	165118473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
tx.7491	chr2	-	3466	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	0	0	0	0	multi-exon	TRUE	canonical	3	269	junction_20	30.5759300757965	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	NA	False	NA	NA	NA	165168399	165131074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
tx.7492	chr2	+	1395	3	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	9	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGGGGGAAAGATTCCTA	NA	False	NA	NA	False	NA	NA	NA	165652195	165659730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_+_165652330_165657273_165657453_165658648
tx.7493	chr2	+	2061	10	ISM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	1	17831	0	1241	5prime_fragment	FALSE	canonical	3	215	junction_9	19.4466665396971	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAACAAACAAATACCAT	NA	False	NA	NA	False	NA	NA	NA	165834556	165895559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673
tx.7494	chr2	-	2040	11	ISM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	72586	-9	-4580	3	3prime_fragment	FALSE	canonical	3	857	junction_6	52.4100181263086	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGACTTTTTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	165924619	165915830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493
tx.7495	chr2	+	417	2	Antisense	novelGene_ENSMUSG00000006800.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCATATGTGTGCATGT	967	False	NA	NA	False	NA	NA	NA	165984342	165989666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_+_165984500_165989406
tx.7496	chr2	-	1639	2	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTTGGTCATAGTGTC	NA	False	NA	NA	False	NA	NA	NA	166096634	166094480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_-_166095994_166096508
tx.7497	chr2	-	426	2	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGCTCTCCGTCTCCG	NA	False	NA	NA	False	NA	NA	NA	166279608	166275799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_-_166276134_166279516
tx.7498	chr2	+	556	4	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCAAGCAGAAAAGACAG	NA	False	NA	NA	False	NA	NA	NA	166568120	166569149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_166568249_166568416_166568508_166568592_166568668_166568887
tx.7499	chr2	+	999	3	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	86009	2869	63940	-2869	3prime_fragment	FALSE	canonical	3	208	junction_2	13.5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGCGGTGTTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	166733516	166737103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_166733826_166735420_166735539_166736531
tx.75	chr1	-	1639	10	FSM	ENSMUSG00000046337.18	ENSMUST00000114981.3	1659	10	36	-16	36	16	multi-exon	FALSE	canonical	3	94	junction_7	27.7328525599353	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTAATTTTCTTAACATG	NA	False	NA	NA	False	NA	NA	NA	36722228	36639040	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
tx.750	chr10	+	1534	2	ISM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-6	7176	-6	-4642	5prime_fragment	FALSE	canonical	3	887	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGACTGATGTTTATCA	7586	False	NA	NA	False	NA	NA	NA	11157067	11166620	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_11157245_11165263
tx.7500	chr2	+	3631	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-3	13	-3	-13	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	109	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACTCAGAATGGTGGT	NA	False	NA	NA	False	NA	NA	NA	166747975	166788296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
tx.7501	chr2	-	2844	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	7	125	7	1	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGTTAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	166838178	166790191	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
tx.7502	chr2	-	2839	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	20	710	7	14	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTCAAATGCCACTT	NA	False	NA	NA	False	NA	NA	NA	166838178	166790178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
tx.7503	chr2	+	2613	21	FSM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	97	4	-20	-4	multi-exon	FALSE	canonical	3	666	junction_12	71.8993045863449	169	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAAGCCTGTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	166857209	166876863	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
tx.7504	chr2	+	446	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	288	4	1	-4	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	3687	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGCTGTGTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	166905141	166907778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
tx.7505	chr2	-	1846	10	FSM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	-26	287	-26	-287	multi-exon	FALSE	canonical	3	9	junction_8	29.1890390386528	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	5221	False	NA	NA	False	NA	NA	NA	167082550	167045113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
tx.7506	chr2	-	1129	6	ISM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	19227	287	-12961	-287	3prime_fragment	FALSE	canonical	3	46	junction_5	14.8404851672713	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	NA	False	NA	NA	False	NA	NA	NA	167063297	167045113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128
tx.7507	chr2	-	583	2	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTATCTCCTCTGAC	3073	False	NA	NA	False	NA	NA	NA	167218286	167216639	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_-_167217140_167218203
tx.7508	chr2	+	704	6	NNC	ENSMUSG00000039463.15	novel	1884	6	NA	NA	-14	-2795	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	45.3898667105335	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCTGGAACTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	167263617	167286075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167285842
tx.7509	chr2	+	1138	2	FSM	ENSMUSG00000039463.15	ENSMUST00000150326.2	2059	2	-2	923	0	-923	multi-exon	FALSE	canonical	3	99	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTAGTCAGGGTAGAG	NA	False	NA	NA	False	NA	NA	NA	167263640	167267131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_167263686_167266038
tx.751	chr10	+	3223	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	13	1824	13	710	multi-exon	FALSE	canonical	3	746	junction_2	70.5	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGGTTTGACTTTTTGA	7605	False	NA	NA	False	NA	NA	NA	11157086	11171972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_11157245_11165263_11167317_11170960
tx.7510	chr2	+	2157	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	341	4	-16	3	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	171	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGCAATGTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	167345349	167358089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
tx.7511	chr2	-	1849	5	FSM	ENSMUSG00000078923.11	ENSMUST00000151365.8	924	5	-5	-920	-5	-2	multi-exon	FALSE	canonical	3	48	junction_4	1117.10764924424	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCGGTGGTTTTATTTT	9421	False	NA	NA	False	NA	NA	NA	167473912	167449765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167471089_167471209_167473859
tx.7512	chr2	-	1741	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	94	206	-14	0	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	725	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9412	False	NA	NA	False	NA	NA	NA	167473921	167449763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
tx.7513	chr2	+	1748	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	18	2447	18	2201	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTTTTTAACATTTAT	1078	False	NA	NA	False	NA	NA	NA	167774264	167818858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
tx.7514	chr2	+	1864	10	FSM	ENSMUSG00000027540.14	ENSMUST00000126839.8	4292	10	-19	2447	-19	2201	multi-exon	FALSE	canonical	1	2	junction_2	47.9021636666927	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTTTTTAACATTTAT	1086	False	NA	NA	False	NA	NA	NA	167774272	167818858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_167774477_167793875_167794000_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
tx.7515	chr2	-	1308	2	FSM	ENSMUSG00000087648.2	ENSMUST00000129713.2	1309	2	3	-2	3	2	multi-exon	FALSE	canonical	3	24	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTAGCTACTTTATTTG	7132	False	NA	NA	False	NA	NA	NA	167996430	167994520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_167995672_167996273
tx.7516	chr2	-	1045	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	15	1233	-2	0	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	708	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	NA	False	NA	NA	NA	168072284	168052200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
tx.7517	chr2	-	2475	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-37	0	-20	0	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATTGTATAGTTT	NA	False	NA	NA	False	NA	NA	NA	168797229	168767280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
tx.7518	chr2	-	1911	5	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-17	8821	0	631	5prime_fragment	FALSE	canonical	3	472	junction_1	66.5187943366384	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAGTTAGTGCACCTGG	NA	False	NA	NA	False	NA	NA	NA	168797209	168776101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
tx.7519	chr2	-	1009	6	FSM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	185.215982031789	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTTGTTACCATT	NA	False	NA	NA	False	NA	NA	NA	168797209	168776732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
tx.752	chr10	+	5124	4	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	54.485472069779	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3057	False	NA	NA	False	NA	NA	NA	12966578	13007438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_12966765_12992453_12992526_13000599_13000913_13002885
tx.7520	chr2	+	937	2	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTTGTTTTTCTAGAT	NA	False	NA	NA	False	NA	NA	NA	168798157	168800168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_168798567_168799640
tx.7521	chr2	+	692	2	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTTGTTTTTCTAGAT	NA	False	NA	NA	False	NA	NA	NA	168798166	168800168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_168798567_168799876
tx.7522	chr2	-	1073	4	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	3.55902608401044	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATGTATATATATATG	NA	False	NA	NA	False	NA	NA	NA	168812228	168805805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_-_168806372_168807365_168807476_168807800_168807975_168812005
tx.7523	chr2	+	1293	3	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	9	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTATGGTGATTATTGT	NA	False	NA	NA	False	NA	NA	NA	168847905	168866329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_168848074_168864580_168864668_168865291
tx.7524	chr2	+	1869	2	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCCAGACCGGTGCTGC	NA	False	NA	NA	False	NA	NA	NA	168847928	168850303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_168848074_168848579
tx.7525	chr2	-	1603	2	ISM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-41	-785	14	-2	intron_retention	FALSE	canonical	3	77	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGAGGTGGTTTTTTTT	4160	False	NA	NA	False	NA	NA	NA	170191701	170189065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_170190069_170191101
tx.7526	chr2	-	1336	3	FSM	ENSMUSG00000013523.14	ENSMUST00000152461.2	371	3	-22	-943	-22	-2	multi-exon	FALSE	canonical	3	30	junction_2	23.5	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGAGGTGGTTTTTTTT	4124	False	NA	NA	False	NA	NA	NA	170191737	170189065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_170190069_170191101_170191384_170191686
tx.7527	chr2	-	1604	3	FSM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-69	-941	-14	1	multi-exon	FALSE	canonical	3	10	junction_2	33.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTTTGATTCTAAA	4132	False	NA	NA	False	NA	NA	NA	170191729	170188909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_170190069_170191101_170191384_170191566
tx.7528	chr2	+	677	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	203	55	-7	1	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	552	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4045	False	NA	NA	False	NA	NA	NA	170353357	170360988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
tx.7529	chr2	-	547	3	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_2	1.5	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	170515753	170512871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_-_170513139_170515342_170515518_170515648
tx.753	chr10	-	1815	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	25	457	25	-457	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAATTGGTGTGCTCATTT	NA	False	NA	NA	False	NA	NA	NA	13068887	13054340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
tx.7530	chr2	+	706	2	NNC	ENSMUSG00000027560.5	novel	1768	8	NA	NA	144115	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_1	0	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTAGTTCTTTCTGCAC	NA	False	NA	NA	False	NA	NA	NA	170717841	170721689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_170717952_170721093
tx.7531	chr2	-	508	3	Antisense	novelGene_ENSMUSG00000085949.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	2	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTAGTCAGTTATGTG	NA	False	NA	NA	False	NA	NA	NA	172136498	172131999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_-_172132278_172134257_172134405_172136415
tx.7532	chr2	-	711	4	Antisense	novelGene_ENSMUSG00000085949.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	2.82842712474619	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATAGATGTGTAGTCAG	NA	False	NA	NA	False	NA	NA	NA	172136518	172132006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_-_172132278_172134257_172134405_172135339_172135530_172136415
tx.7533	chr2	+	901	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	33	2683	33	-2683	multi-exon	FALSE	canonical	3	138	junction_1	7.5	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCAGGAGGATCTCAAAT	NA	False	NA	NA	False	NA	NA	NA	172187517	172194986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_172187768_172193374_172193545_172194505
tx.7534	chr2	+	1453	2	ISM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	5921	1850	5921	-1850	3prime_fragment	FALSE	canonical	3	153	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGTCCTATTGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	172193405	172195819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_172193545_172194505
tx.7535	chr2	-	1846	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	10	6	-4	0	multi-exon	FALSE	canonical	3	1025	junction_8	140.198965759381	597	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	False	NA	NA	False	NA	NA	NA	172212445	172198115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
tx.7536	chr2	+	1967	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	1	-1365	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCCTCCTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	172212601	172223003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
tx.7537	chr2	+	1881	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	208	1362	208	-1362	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCCTCCTTCTTCACGT	NA	False	NA	NA	False	NA	NA	NA	172212861	172223006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
tx.7538	chr2	+	2148	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	20	5	20	-5	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	324	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGGGGGGGTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	172282495	172311823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
tx.7539	chr2	+	2836	7	FSM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	-3	5	-3	-2	multi-exon	FALSE	canonical	3	551	junction_1	51.676611946046	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	NA	False	NA	NA	NA	172391509	172400537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
tx.754	chr10	+	2282	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	52	3407	-31	85	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATAATATTTTAGT	NA	False	NA	NA	False	NA	NA	NA	13376796	13391372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
tx.7540	chr2	+	2731	7	FSM	ENSMUSG00000028640.12	ENSMUST00000170744.2	2776	7	44	1	44	-1	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTCTGGTTCTGACCCT	NA	False	NA	NA	False	NA	NA	NA	172392954	172400538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
tx.7541	chr2	+	2438	6	ISM	ENSMUSG00000028640.12	ENSMUST00000170744.2	2776	7	521	2	521	-2	3prime_fragment	FALSE	canonical	3	564	junction_3	44.2113107699828	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	NA	False	NA	NA	NA	172393431	172400537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
tx.7542	chr2	+	1720	3	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_2	11.5	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATTTATATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	172419560	172468690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_172419745_172420215_172420303_172467241
tx.7543	chr2	+	1921	4	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	18.0800688297608	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATTTATTTATCTAAA	NA	False	NA	NA	False	NA	NA	NA	172419564	172468695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_172419745_172420215_172420303_172449327_172449528_172467241
tx.7544	chr2	+	440	2	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTTGCAACCTGTTG	NA	False	NA	NA	False	NA	NA	NA	172636845	172645427	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr2_+_172637054_172645195
tx.7545	chr2	-	720	2	ISM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	67335	1670	67106	-1670	3prime_fragment	FALSE	canonical	3	105	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGACGTTACAGATATATT	NA	False	NA	NA	False	NA	NA	NA	172714779	172711474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_172712080_172714664
tx.7546	chr2	-	1738	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	258	1674	29	-1674	multi-exon	TRUE	canonical	3	82	junction_3	13.8734358477712	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAGGACGTTACAGATA	NA	False	NA	NA	False	NA	NA	NA	172781856	172711478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
tx.7547	chr2	+	1547	12	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	3	-59	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	326.651961776187	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	NA	False	NA	NA	NA	172841919	172857473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_172842044_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
tx.7548	chr2	+	1661	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	22	59	15	-59	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	NA	False	NA	NA	NA	172841931	172857473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
tx.7549	chr2	+	885	5	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	9252	59	-2295	-59	3prime_fragment	FALSE	canonical	3	1013	junction_3	156.47763418457	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	NA	False	NA	NA	NA	172851161	172857473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
tx.755	chr10	+	2037	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	55	-85	-28	85	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATAATATTTTAGT	NA	False	NA	NA	False	NA	NA	NA	13376799	13391372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
tx.7550	chr2	+	1751	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	26	-9	15	0	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	184	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	172863720	172876527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
tx.7551	chr2	+	1926	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	124	4982	124	1232	multi-exon	FALSE	canonical	3	50	junction_2	5.74804314527997	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTTGTCATTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	173579427	173621150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
tx.7552	chr2	+	2631	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	-6	1013	intron_retention	TRUE	canonical	3	30	junction_1	23.5554058096468	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTATCGACTCTTGC	NA	False	NA	NA	False	NA	NA	NA	173918094	173939773	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_173918932_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
tx.7553	chr2	+	2059	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	40	368	40	0	multi-exon	FALSE	canonical	3	214	junction_9	24.2330284822489	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	173952181	173964495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
tx.7554	chr2	+	1014	3	ISM	ENSMUSG00000039263.17	ENSMUST00000153957.8	2052	10	9654	0	9261	0	3prime_fragment	FALSE	canonical	3	269	junction_2	7.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	173962626	173964495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_173962918_173963271_173963383_173963883
tx.7555	chr2	-	1534	4	Antisense	novelGene_ENSMUSG00000027523.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	3.2659863237109	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCCCTCTAGATTG	525	False	NA	NA	False	NA	NA	NA	174169180	174163257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr2_-_174163991_174165456_174165759_174167686_174167944_174168938
tx.7556	chr2	+	1570	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	178	-32	-20	0	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	174172059	174188537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
tx.7557	chr2	+	836	4	ISM	ENSMUSG00000027523.21	ENSMUST00000238267.2	1071	7	1112	0	779	0	3prime_fragment	FALSE	canonical	3	818	junction_2	41.1204193666467	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	174187221	174188537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_174187356_174187441_174187573_174187782_174187851_174188034
tx.7558	chr2	+	2251	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	29	-1	-18	1	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	260	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	NA	False	NA	NA	NA	174257625	174269296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
tx.7559	chr2	-	1389	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	51	1	51	-1	multi-exon	FALSE	canonical	3	493	junction_4	13.5292276202302	404	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGTGTACTTTATTTAC	5380	False	NA	NA	False	NA	NA	NA	174280781	174269286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
tx.756	chr10	-	1893	12	FSM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	94	-26	94	0	multi-exon	FALSE	canonical	2	10	junction_11	40.2069029063706	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTTAGCCATTAATTT	NA	False	NA	NA	False	NA	NA	NA	13428770	13399859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428692
tx.7560	chr2	-	402	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	16	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1326.5	1412	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	174305882	174302867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_174303015_174304292_174304423_174305757
tx.7561	chr2	-	1418	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	126	9	-21	-9	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	389	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGACAGAAGAGCAGC	NA	False	NA	NA	False	NA	NA	NA	174314748	174306868	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
tx.7562	chr2	+	478	5	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-589249	-1189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.363654119317	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	174846521	175444464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_174846640_175435718_175435774_175442797_175442925_175443129_175443191_175444347
tx.7563	chr2	+	1367	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109070.3	1281	4	-108	1163	-30	473	5prime_fragment	FALSE	canonical	3	436	junction_1	382.5	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCATACAGATAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	174852003	174859878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_174852115_174858430_174858558_174858749
tx.7564	chr2	+	1419	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	-27	-473	-27	473	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCATACAGATAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	174852006	174859878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
tx.7565	chr2	-	3688	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	-14	-3049	4	3049	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAATTATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	174909570	174900292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
tx.7566	chr2	-	4957	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-31	-3015	-31	2380	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174983836	174968905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
tx.7567	chr2	-	4520	4	FSM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	-4	0	-4	0	multi-exon	FALSE	canonical	3	92	junction_1	16.3571255285137	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175017668	175008047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_175012254_175013387_175013449_175013640_175013768_175017542
tx.7568	chr2	-	1229	3	ISM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	11	4410	11	-4410	5prime_fragment	FALSE	canonical	3	122	junction_2	4	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	175017653	175012457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_175013449_175013640_175013768_175017542
tx.7569	chr2	-	536	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	27	1291	9	737	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGGAGAGAAACCCTATG	NA	False	NA	NA	False	NA	NA	NA	175048683	175037997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
tx.757	chr10	-	2021	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	91	17	72	9	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTGTTTAGTTAATGC	NA	False	NA	NA	False	NA	NA	NA	13428792	13399876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
tx.7570	chr2	+	1403	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	51	-9	-16	9	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGCTCTGTTCAATGAAA	NA	False	NA	NA	False	NA	NA	NA	175661062	175671458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
tx.7571	chr2	+	1226	3	FSM	ENSMUSG00000078901.9	ENSMUST00000109051.8	3382	3	-33	2189	-33	922	multi-exon	FALSE	canonical	3	19	junction_2	45	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTGAGCCAGATAATC	NA	False	NA	NA	False	NA	NA	NA	175116884	175126409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_175116997_175125090_175125218_175125422
tx.7573	chr2	-	1228	4	ISM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	-53	4384	-53	-1596	5prime_fragment	FALSE	canonical	3	21	junction_2	108.76988962433	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGAGTTCTTCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	175180043	175168131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_175169060_175169264_175169392_175176415_175176471_175179925
tx.7575	chr2	+	1107	3	FSM	ENSMUSG00000078879.11	ENSMUST00000121956.8	1271	3	17	147	17	-147	multi-exon	FALSE	canonical	3	19	junction_2	40	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACGTTCCAAATGTAGTA	NA	False	NA	NA	False	NA	NA	NA	176362331	176371520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_176362453_176370328_176370456_176370661
tx.7576	chr2	-	4420	5	FSM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	-40	22	-40	-22	multi-exon	FALSE	canonical	2	4	junction_1	105.8828952192	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCCTTTCCTCCCC	NA	False	NA	NA	False	NA	NA	NA	175180030	175163769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_175167842_175168998_175169060_175169264_175169392_175176415_175176471_175179925
tx.7577	chr2	-	1230	3	FSM	ENSMUSG00000078889.12	ENSMUST00000109020.9	3438	3	23	2185	23	-299	multi-exon	FALSE	canonical	3	24	junction_1	41.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAGCCAGATAATCAATA	NA	False	NA	NA	False	NA	NA	NA	175592863	175583334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_175584326_175584530_175584658_175592751
tx.7578	chr2	+	624	5	ISM	ENSMUSG00000078887.11	ENSMUST00000147820.2	599	6	5	1127	5	-892	5prime_fragment	FALSE	canonical	3	14	junction_2	92.1259328310981	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGATATGTAACTGTTG	NA	False	NA	NA	False	NA	NA	NA	175661042	175670557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_175661175_175664841_175664897_175666200_175666303_175670021_175670149_175670349
tx.7579	chr2	-	479	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	15	1360	1	668	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACTGTAACCAATGTG	NA	False	NA	NA	False	NA	NA	NA	175048695	175038066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
tx.758	chr10	+	805	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	323	338	323	-338	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	603	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGAGCTCTTCCACCAAG	NA	False	NA	NA	False	NA	NA	NA	13428960	13438782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
tx.7580	chr2	-	1439	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	7	-481	7	481	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCATACAGATAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	175048685	175038253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
tx.7581	chr2	-	474	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3611	1277	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	46.0027173110459	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTGGTAAGGACTTTA	NA	False	NA	NA	False	NA	NA	NA	175895229	175884815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175891615_175891671_175895124
tx.7582	chr2	+	1407	4	FSM	ENSMUSG00000078875.11	ENSMUST00000156844.8	752	4	-53	-602	-32	131	multi-exon	FALSE	canonical	3	46	junction_2	49.7482551341139	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGATTGCTCTGTTCAA	NA	False	NA	NA	False	NA	NA	NA	176692716	176702908	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806
tx.7583	chr2	+	3060	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	8	755	4	-755	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGACAGTTGGAGTTTA	3043	False	NA	NA	False	NA	NA	NA	175968369	175981366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
tx.7584	chr2	-	3789	5	NNC	ENSMUSG00000074527.12	novel	3823	5	NA	NA	-1	8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	34.8093019177346	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGGATAGACAGAAACAT	NA	False	NA	NA	False	NA	NA	NA	176619588	176605834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619512
tx.7586	chr2	-	1221	3	FSM	ENSMUSG00000078889.12	ENSMUST00000109020.9	3438	3	23	2194	23	-308	multi-exon	FALSE	canonical	3	24	junction_1	41.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTATAAATGTGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	175592863	175583343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_175584326_175584530_175584658_175592751
tx.7587	chr2	+	451	3	FSM	ENSMUSG00000074521.10	ENSMUST00000108935.8	1451	3	46	954	46	147	multi-exon	FALSE	canonical	3	28	junction_2	14.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTAATTATTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	177538934	177546623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_177539047_177546077_177546205_177546411
tx.759	chr10	-	1388	6	FSM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	166	0	8	0	multi-exon	FALSE	canonical	3	87	junction_1	15.3179633110933	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTGCACTGTTCA	NA	False	NA	NA	False	NA	NA	NA	13744558	13522797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
tx.7590	chr2	+	4467	5	FSM	ENSMUSG00000078878.10	ENSMUST00000108981.9	1646	5	-35	-2786	-35	2786	multi-exon	FALSE	canonical	3	21	junction_2	64.6006965906715	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176400085	176416392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300
tx.7591	chr2	+	1231	4	FSM	ENSMUSG00000078878.10	ENSMUST00000108980.9	1167	4	-52	-12	-25	12	multi-exon	FALSE	canonical	3	21	junction_2	71.7696933871734	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGAGTTCTTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	176400095	176412008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081
tx.7592	chr2	+	496	5	NIC	ENSMUSG00000078877.12	novel	1213	4	NA	NA	-31	406	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	16.6038399173203	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACTGTAACCAATGTGG	NA	False	NA	NA	False	NA	NA	NA	176490373	176500817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487_176499549_176500702
tx.7593	chr2	+	1395	4	FSM	ENSMUSG00000078877.12	ENSMUST00000118012.9	1213	4	-5	-177	-5	177	multi-exon	FALSE	canonical	3	47	junction_2	11.7284080571728	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGATTGCTCTGTTCAA	NA	False	NA	NA	False	NA	NA	NA	176490399	176500588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487
tx.7594	chr2	+	1427	4	NNC	ENSMUSG00000078876.11	novel	408	4	NA	NA	-108	11922	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	3.09120616516523	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGCTTCTCAAAACAT	1804	False	NA	NA	False	NA	NA	NA	176522824	176540445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_176522936_176526678_176526806_176526998_176527060_176539317
tx.7595	chr2	+	1889	3	ISM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-74	810	-74	-810	5prime_fragment	FALSE	canonical	3	143	junction_2	82	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAATTTAAAACAATTCA	NA	False	NA	NA	False	NA	NA	NA	176766038	176778017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_176766152_176776035_176776163_176776368
tx.7596	chr2	+	2078	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-64	-1066	-64	753	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	176766048	176779893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
tx.7597	chr2	+	403	4	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-61	33914	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	117.565111982916	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTGTAATTCCTCCCC	NA	False	NA	NA	False	NA	NA	NA	176766051	176813054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_176766152_176776035_176776163_176776368_176776430_176812939
tx.7598	chr2	+	1157	3	ISM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-109	1668	4	-1668	5prime_fragment	FALSE	canonical	3	64	junction_2	12	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGAGTTCTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	177156529	177166328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_177156642_177165078_177165206_177165410
tx.7599	chr2	+	1466	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-11	-457	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	39.4208066888541	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACGTAAGAAAAATTCAC	NA	False	NA	NA	False	NA	NA	NA	177189996	177200205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
tx.76	chr1	+	512	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	60	293	60	2	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	2054	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTAGTCTTATGTCTA	NA	False	NA	NA	False	NA	NA	NA	36730624	36732469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
tx.760	chr10	-	1057	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	126	256	-2	-256	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACTGGTTTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	13744575	13528450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
tx.7600	chr2	+	1378	3	ISM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-109	1090	-9	-488	5prime_fragment	FALSE	canonical	3	122	junction_1	63.5	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCATACAGATAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	177189998	177200174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_177190111_177198701_177198829_177199035
tx.7601	chr2	+	469	5	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-9	-302	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	35.4436171968946	19	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACTGTAACCAATGTG	NA	False	NA	NA	False	NA	NA	NA	177189998	177200360	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
tx.7602	chr2	+	415	4	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078864.11	novel	1074	3	NA	NA	-9	-261	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACTGTAACCAATGTGG	NA	False	NA	NA	False	NA	NA	NA	177189998	177411494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
tx.7603	chr2	-	413	4	FSM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-41	976	-30	-976	multi-exon	FALSE	canonical	3	688	junction_1	226.200992236747	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACTGTAACCAATGTG	2307	False	NA	NA	False	NA	NA	NA	177270033	177261972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_177262087_177263226_177263288_177263479_177263607_177269922
tx.7604	chr2	+	573	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-23	-259	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	118.732640836461	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	177401057	177411496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
tx.7605	chr2	+	467	5	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-19	-259	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	122.051218756717	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	177401061	177411496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168_177410230_177411379
tx.7606	chr2	+	500	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-15	259	-15	-259	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	177401065	177411496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
tx.7607	chr2	-	4399	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-23	-2800	-5	2800	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177482134	177470783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
tx.7608	chr2	-	1245	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-10	-925	-10	925	multi-exon	FALSE	canonical	3	312	junction_1	213.5	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTTTCCATTTCATAT	NA	False	NA	NA	False	NA	NA	NA	177482139	177475096	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_177476105_177476312_177476440_177482029
tx.7609	chr2	+	1248	3	FSM	ENSMUSG00000074521.10	ENSMUST00000108935.8	1451	3	42	161	42	-161	multi-exon	FALSE	canonical	3	28	junction_2	14.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATACTGTTCTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	177538930	177547416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_177539047_177546077_177546205_177546411
tx.761	chr10	-	617	3	ISM	ENSMUSG00000039116.8	ENSMUST00000208429.3	4326	25	339	61098	-141	21783	5prime_fragment	FALSE	canonical	3	97	junction_2	11.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCCCCTGCCGGCTACA	NA	False	NA	NA	False	NA	NA	NA	14421064	14344739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_14344849_14411597_14411699_14420657
tx.7610	chr2	-	1400	4	FSM	ENSMUSG00000078862.11	ENSMUST00000108928.2	767	4	-80	-553	-22	553	multi-exon	FALSE	canonical	3	25	junction_2	8.5764535535124	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGATTGCTCTGTTCAA	NA	False	NA	NA	False	NA	NA	NA	177599112	177588917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_177590024_177590229_177590357_177595474_177595530_177599000
tx.7611	chr2	+	720	3	FSM	ENSMUSG00000039138.2	ENSMUST00000041998.2	737	3	18	-1	18	1	multi-exon	FALSE	canonical	3	53	junction_2	6	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGGTAATGACCCTT	NA	False	NA	NA	False	NA	NA	NA	179056746	179058676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_179056894_179057552_179057714_179058264
tx.7612	chr2	+	2137	3	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	7	2468	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	26.5	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTCTTAGCTGCATTT	NA	False	NA	NA	False	NA	NA	NA	179056735	179061143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_+_179056894_179057552_179057714_179059325
tx.7613	chr2	-	929	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-10	-5	-10	5	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	244	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGAACCTGTCGTCAT	NA	False	NA	NA	False	NA	NA	NA	179684236	179678161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
tx.7614	chr2	-	490	4	ISM	ENSMUSG00000027566.16	ENSMUST00000126021.8	1515	7	4228	-4	654	4	3prime_fragment	FALSE	canonical	3	3926	junction_1	788.908247023836	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGAGAACCTGTCGTCA	NA	False	NA	NA	False	NA	NA	NA	179679960	179678162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857
tx.7616	chr2	+	1223	2	ISM	ENSMUSG00000039069.20	ENSMUST00000142608.8	2339	5	-3	7618	1	-7618	5prime_fragment	FALSE	canonical	3	114	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCACAGGAAACACAGA	NA	False	NA	NA	False	NA	NA	NA	179712381	179714782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_179712409_179713586
tx.762	chr10	+	730	2	FSM	ENSMUSG00000111888.2	ENSMUST00000220256.2	1003	2	605	-332	605	332	multi-exon	FALSE	canonical	3	15	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTACGCCTATTTCTGT	NA	False	NA	NA	False	NA	NA	NA	14420838	14427107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_14421099_14426637
tx.7621	chr2	+	1423	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	110	2	0	0	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	NA	False	NA	NA	NA	179813387	179818077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
tx.7622	chr2	+	354	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	39	1	-2	-1	multi-exon	FALSE	canonical	3	3954	junction_5	1417.02976680097	4104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	179899208	179900237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
tx.7623	chr2	+	2957	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038259.13	3010	12	38	15	38	0	multi-exon	FALSE	canonical	3	51	junction_3	7.21568539381252	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	180098075	180116645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
tx.7624	chr2	+	1502	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	25	-17	5	0	multi-exon	TRUE	canonical	3	47	junction_3	10.4253297309965	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	False	NA	NA	False	NA	NA	NA	180224529	180228097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
tx.7625	chr2	+	1811	4	FSM	ENSMUSG00000027569.16	ENSMUST00000150757.8	1825	4	14	0	5	0	multi-exon	FALSE	canonical	3	65	junction_2	3.55902608401044	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	False	NA	NA	False	NA	NA	NA	180224529	180228097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_180224749_180225193_180225316_180226198_180226665_180227093
tx.7626	chr2	+	2254	7	FSM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	190	5	-27	-5	multi-exon	FALSE	canonical	3	62	junction_6	11.4370256428652	8	2	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	180231227	180237624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
tx.7627	chr2	+	2247	7	FSM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	197	5	-20	-5	multi-exon	FALSE	canonical	3	62	junction_6	11.4370256428652	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	180231234	180237624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
tx.7628	chr2	+	1542	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	109	4	109	-1	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAATGGCTTCTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	180352018	180360522	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
tx.7629	chr2	+	2256	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	19	0	19	0	multi-exon	TRUE	canonical	3	124	junction_2	30.6879455161143	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	NA	False	NA	NA	NA	180367074	180384073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
tx.763	chr10	+	523	4	Antisense	novelGene_ENSMUSG00000019868.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	4.54606056566195	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCATCCCTGTTTTAT	760	False	NA	NA	False	NA	NA	NA	14523824	14535622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_14523956_14528662_14528729_14532326_14532395_14535364
tx.7630	chr2	+	2146	13	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	51.5985437994351	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	NA	False	NA	NA	NA	180367114	180384073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
tx.7631	chr2	-	1606	2	ISM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	9949	0	9387	0	3prime_fragment	FALSE	canonical	3	596	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	180552793	180546169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_180547462_180552479
tx.7633	chr2	-	977	7	FSM	ENSMUSG00000027574.16	ENSMUST00000103053.10	950	7	-21	-6	-21	6	multi-exon	FALSE	canonical	3	96	junction_2	10.8576649832682	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCATCCCTGGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	180596513	180576558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_180576823_180577735_180577821_180578943_180579005_180584822_180585021_180585533_180585615_180585869_180586008_180596363
tx.7634	chr2	+	2716	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	65.799947842644	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4034	False	NA	NA	False	NA	NA	NA	180609026	180624253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
tx.7635	chr2	+	2637	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	11	66	0	0	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4045	False	NA	NA	False	NA	NA	NA	180609037	180624253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
tx.7636	chr2	+	810	4	FSM	ENSMUSG00000016344.15	ENSMUST00000146089.8	750	4	-59	-1	-8	1	multi-exon	TRUE	canonical	3	258	junction_1	285.921123544395	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGGTATGTTTGAAACA	3377	False	NA	NA	False	NA	NA	NA	180829080	180830298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974
tx.7637	chr2	+	892	4	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	-2	2	intron_retention	FALSE	canonical	3	629	junction_1	111.05254011803	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3434	False	NA	NA	False	NA	NA	NA	180829137	180830299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_180829530_180829601_180829680_180829796_180829894_180829974
tx.7638	chr2	-	924	5	FSM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	213	-1	213	1	multi-exon	FALSE	canonical	3	148	junction_1	19.0312243431683	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTGGCTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	180956080	180948250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955986
tx.764	chr10	-	1327	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	69	578	9	22	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTGGAGATCCTGACTT	NA	False	NA	NA	False	NA	NA	NA	14581235	14531076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
tx.7640	chr2	-	1680	7	FSM	ENSMUSG00000038671.16	ENSMUST00000185118.8	2318	7	-23	661	-4	-605	multi-exon	FALSE	canonical	3	22	junction_2	105.887387770635	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTAGATGGTGGTTCCC	6115	False	NA	NA	False	NA	NA	NA	181007158	181000282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
tx.7641	chr2	-	1245	3	ISM	ENSMUSG00000038671.16	ENSMUST00000108808.8	1133	8	4279	-610	-932	-605	3prime_fragment	FALSE	canonical	3	258	junction_2	22.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTAGATGGTGGTTCCC	NA	False	NA	NA	False	NA	NA	NA	181002865	181000282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_-_181001355_181001431_181001533_181002793
tx.7642	chr2	-	1715	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	601	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	90.1022095359781	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTCAATCAGTTAGATG	6129	False	NA	NA	False	NA	NA	NA	181007144	181000291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006492_181007011
tx.7643	chr2	-	1735	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	46	666	3	601	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	101	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTCAATCAGTTAGATG	6122	False	NA	NA	False	NA	NA	NA	181007151	181000291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
tx.7644	chr2	-	1834	5	FSM	ENSMUSG00000038671.16	ENSMUST00000152580.8	1822	5	-7	-5	1	5	multi-exon	FALSE	canonical	3	258	junction_2	29.3715423496962	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAGGTATTCAGAGACAA	6139	False	NA	NA	False	NA	NA	NA	181007134	181001102	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806
tx.7646	chr2	+	2076	6	FSM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	0	-4	0	4	multi-exon	FALSE	canonical	3	135	junction_3	10.1074230147946	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCAGTGGAGACTCAG	NA	False	NA	NA	False	NA	NA	NA	181007197	181022579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
tx.7647	chr2	+	1517	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	18	2068	0	-358	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	116	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATACAATGTAGAATTT	NA	False	NA	NA	False	NA	NA	NA	181138975	181157691	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
tx.7648	chr2	+	1422	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	-4	2057	0	-351	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAGAATTTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	181138975	181157698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
tx.7649	chr2	+	1458	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	-12	353	0	-353	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTAGAATTTTATTC	NA	False	NA	NA	False	NA	NA	NA	181138979	181157696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
tx.765	chr10	+	430	2	NIC	ENSMUSG00000112227.2	novel	628	3	NA	NA	-34	-55	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTGACTTTTAATAAAA	NA	False	NA	NA	False	NA	NA	NA	15667490	15682758	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_15667781_15682618
tx.7650	chr2	+	1478	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	6	1466	0	-351	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAGAATTTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	181138979	181157698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
tx.7651	chr2	+	1259	7	ISM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	2783	2073	82	-363	3prime_fragment	FALSE	canonical	3	669	junction_4	181.646787903215	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTTATGATACAATGTAG	NA	False	NA	NA	False	NA	NA	NA	181141740	181157686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
tx.7652	chr2	+	2773	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	-30	985	11	-968	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAATCTATTAATTGGC	7016	False	NA	NA	False	NA	NA	NA	181162288	181193057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
tx.7653	chr2	+	1014	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	21	5543	-20	0	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGTTTTATCCTTTT	7026	False	NA	NA	False	NA	NA	NA	181162298	181191383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
tx.7655	chr2	+	4393	7	NIC	ENSMUSG00000000826.17	novel	3664	6	NA	NA	0	637	intron_retention	FALSE	canonical	3	55	junction_1	77.7924589318699	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	7071	False	NA	NA	False	NA	NA	NA	181162343	181194679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
tx.7656	chr2	-	1787	14	NNC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	30.2142252636738	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGTGGCAGAATGTAACC	4549	False	NA	95	True	NA	NA	NA	181223799	181210941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212349_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
tx.7658	chr2	-	1834	14	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.5776269109327	28	3	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	4555	False	NA	NA	False	NA	NA	NA	181223793	181210944	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
tx.7659	chr2	+	3030	21	FSM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	25	-1	25	1	multi-exon	FALSE	canonical	3	340	junction_3	47.7921280128851	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGGCTTGGGCCTCAC	2519	False	NA	NA	False	NA	NA	NA	181243136	181297454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
tx.766	chr10	-	767	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	79	0	9	0	multi-exon	FALSE	canonical	3	143	junction_1	12	216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTGGCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	17898957	17887007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_17887565_17894586_17894654_17898814
tx.7660	chr2	+	332	2	ISM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	53552	-1	53498	1	3prime_fragment	FALSE	canonical	3	512	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGGCTTGGGCCTCAC	3920	False	NA	NA	False	NA	NA	NA	181296663	181297454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr2_+_181296756_181297214
tx.7661	chr2	+	1193	10	FSM	ENSMUSG00000059540.16	ENSMUST00000103042.10	1183	10	-15	5	-15	4	multi-exon	FALSE	canonical	3	30	junction_1	6.17841723309237	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCAGCTGGGTCCTGTC	2277	False	NA	NA	False	NA	NA	NA	181322087	181329859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
tx.7662	chr2	-	1484	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	28	-1	0	1	multi-exon	FALSE	canonical	3	85	junction_5	20.8461027532726	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTTCTTTCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	181335742	181330213	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
tx.7663	chr2	-	1377	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108772.8	779	5	-2	-596	0	0	multi-exon	FALSE	canonical	3	30	junction_4	46.2729672703189	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGTTCTTTCAAGTT	NA	False	NA	NA	False	NA	NA	NA	181335742	181330214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181335671
tx.7664	chr2	-	1553	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108769.8	1460	5	-7	-86	-7	1	multi-exon	FALSE	canonical	3	85	junction_4	23.2849200127464	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTTCTTTCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	181335730	181330213	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_-_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
tx.7668	chr2	+	1677	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	89	1182	66	-1182	multi-exon	FALSE	canonical	3	712	junction_2	38.5	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTCTGGCCTCAGTTCT	8985	False	NA	NA	False	NA	NA	NA	181506218	181511441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr2_+_181506363_181507738_181507827_181509996
tx.767	chr10	-	1179	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	11	0	-7	0	multi-exon	FALSE	canonical	3	48	junction_2	8.9977775033616	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTCTGTTTAGAA	NA	False	NA	NA	False	NA	NA	NA	18110733	18089423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
tx.7670	chr3	-	1655	5	FSM	ENSMUSG00000040374.14	ENSMUST00000059021.10	1749	5	95	-1	1	0	multi-exon	FALSE	canonical	3	32	junction_2	14.3592304807744	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGCATTTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	5641204	5625558	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5641097
tx.7671	chr3	-	1577	4	NIC	ENSMUSG00000040374.14	novel	2051	5	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	25.9786236911983	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGCATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	5641192	5625560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_5626825_5628224_5628333_5628679_5628790_5641097
tx.7673	chr3	+	1589	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	-44	1747	-44	14	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAAAGGAAGACCTGAG	NA	False	NA	NA	False	NA	NA	NA	7568498	7617149	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
tx.7674	chr3	+	906	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	158	1009	3	-978	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	492	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGATCTTACATGTCC	NA	False	NA	NA	False	NA	NA	NA	8574577	8625657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
tx.7675	chr3	+	905	6	NIC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_5	694.848357557244	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGGTTTGGTCTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	8574585	8626666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325_8625397_8626398
tx.7676	chr3	-	682	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	100	1	100	-1	multi-exon	FALSE	canonical	3	890	junction_1	0.5	363	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTGCCGTGGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	8988878	8867206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_8867475_8965045_8965228_8988646
tx.7677	chr3	-	2244	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	232	3841	-13	164	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	613	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	9069551	8994493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
tx.7678	chr3	-	1890	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	674	11270	674	2	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTATGTCTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	9674471	9503349	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
tx.7679	chr3	+	676	4	FSM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	39	272	-18	0	multi-exon	FALSE	canonical	3	202	junction_1	88.411914732499	199	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGATATGTGTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	10077646	10081395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_10077779_10080030_10080204_10080531_10080634_10081126
tx.768	chr10	-	1118	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	157	1260	-32	0	multi-exon	FALSE	canonical	3	26	junction_2	0.471404520791032	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGCCTCCGCTGTT	NA	False	NA	NA	False	NA	NA	NA	18421667	18416505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
tx.7680	chr3	-	2159	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	32	1994	32	4	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	326	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATACCATTTTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	10396467	10379009	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
tx.7681	chr3	-	1411	2	FSM	ENSMUSG00000027531.17	ENSMUST00000195155.2	734	2	489	-1166	489	2	multi-exon	FALSE	canonical	3	364	junction_1	0	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAATACCATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	10381223	10379011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_10380362_10381162
tx.7682	chr3	-	1604	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	1	5	0	-3	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	212	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTATTGCATTTGATC	NA	False	NA	NA	False	NA	NA	NA	10416376	10405017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
tx.7683	chr3	+	1214	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	36	4938	-15	-4938	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTCTAGTGAGTCTATG	NA	False	NA	NA	False	NA	NA	NA	10432002	10455459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
tx.7684	chr3	-	2286	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	-3	5	-3	-5	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTTGGGTGAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	10505150	10483210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
tx.7685	chr3	-	2166	7	FSM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	12	334	-3	-5	multi-exon	FALSE	canonical	3	23	junction_1	44.7837396086273	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTTGGGTGAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	10505150	10483210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
tx.7686	chr3	+	3419	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	21	2198	20	0	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTGATAATTGCACAC	NA	False	NA	NA	False	NA	NA	NA	14598903	14631163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
tx.7687	chr3	+	3301	19	FSM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	35	55	-20	-55	multi-exon	FALSE	canonical	2	8	junction_6	18.5947689444845	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAGCTATCATAATAAC	NA	False	NA	NA	False	NA	NA	NA	14598918	14631108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
tx.7688	chr3	+	1503	8	FSM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	244	4	244	-4	multi-exon	FALSE	non_canonical	0	0	junction_3	75.6598186837988	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTGATCTTTGGGGGA	2196	False	NA	NA	False	NA	NA	NA	14643974	14671364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
tx.7689	chr3	-	412	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	18	5	-6	0	multi-exon	FALSE	canonical	3	4849	junction_3	245.494512271773	1565	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	14676327	14671348	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
tx.769	chr10	+	1888	3	FSM	ENSMUSG00000019851.9	ENSMUST00000019998.9	1952	3	67	-3	67	3	multi-exon	FALSE	canonical	3	42	junction_2	1	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGCTTTGTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	18720834	18732824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_18721155_18729284_18729426_18731397
tx.7690	chr3	+	1211	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	13	1075	13	-1075	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTGAACTGATATTAT	2192	False	NA	NA	False	NA	NA	NA	14706799	14726987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
tx.7691	chr3	+	1586	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	202	0	-9	0	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	NA	False	NA	NA	NA	14951689	14965830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
tx.7692	chr3	+	4395	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	24	683	0	-501	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTATTGGTCCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	16237399	16270518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
tx.7693	chr3	-	1861	6	FSM	ENSMUSG00000039519.7	ENSMUST00000035625.7	2166	6	-16	321	-16	-321	multi-exon	FALSE	canonical	2	3	junction_2	6.79411510058521	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGCAATCATTTCAG	NA	False	NA	NA	False	NA	NA	NA	18297518	18126434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_18126918_18133468_18133645_18150686_18150894_18151367_18151959_18157864_18158002_18297251
tx.7694	chr3	-	1760	8	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	21	-2022	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	122.300399652258	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCTACAAAAAGCTGTAC	NA	False	NA	NA	False	NA	NA	NA	19217208	19187587	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19211947_19212078_19217073
tx.7695	chr3	-	1666	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	-14	2021	-14	-2021	multi-exon	TRUE	canonical	3	251	junction_6	16.1761140780679	207	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTACAAAAAGCTGTACA	NA	False	NA	NA	False	NA	NA	NA	19217243	19187586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
tx.7696	chr3	-	1646	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-14	-2023	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	91.40280204798	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTCTACAAAAAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	19217243	19187588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_19188370_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
tx.7697	chr3	+	2801	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	134	18	-21	-18	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	469	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGACAATACTATTATC	NA	False	NA	NA	False	NA	NA	NA	19242407	19274963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
tx.7698	chr3	+	2758	7	ISM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	11914	18	-11548	-18	3prime_fragment	FALSE	canonical	3	975	junction_4	80.6948986409096	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGACAATACTATTATC	NA	False	NA	NA	False	NA	NA	NA	19254187	19274963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
tx.7699	chr3	-	1702	7	FSM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	-1	-3	-1	0	multi-exon	FALSE	canonical	3	45	junction_2	8.93805845186128	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	False	NA	NA	False	NA	NA	NA	20209261	20176247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
tx.77	chr1	-	2127	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	35	1086	-26	-1086	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGTGGCTCTGATT	NA	False	NA	NA	False	NA	NA	NA	36749054	36738280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
tx.770	chr10	+	2103	7	FSM	ENSMUSG00000020009.14	ENSMUST00000020188.13	2112	7	9	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	3.14907393794853	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	False	NA	NA	False	NA	NA	NA	19467705	19485977	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_19467946_19473163_19473279_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
tx.7700	chr3	-	4070	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1857	False	NA	NA	False	NA	NA	NA	27207980	27151370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
tx.7701	chr3	-	4084	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	2	0	2	0	multi-exon	FALSE	canonical	3	272	junction_24	111.161098998506	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1829	False	NA	NA	False	NA	NA	NA	27208008	27151370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
tx.7702	chr3	+	2097	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	16	2367	16	-2367	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTGTTGTTACTTAAGA	5584	False	NA	NA	False	NA	NA	NA	27237129	27296740	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
tx.7703	chr3	+	487	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	72	-7	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	2670.46824857864	1289	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	NA	False	NA	NA	NA	28859656	28861571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
tx.7704	chr3	+	482	4	FSM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	41	2	0	0	multi-exon	FALSE	canonical	3	3779	junction_1	1855.270390596	2524	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	NA	False	NA	NA	NA	28859658	28861571	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_28859693_28860651_28860742_28860885_28861008_28861335
tx.7705	chr3	+	3027	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	566	1962	0	-457	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATAGTGTCCTTTCCG	8779	False	NA	NA	False	NA	NA	NA	30656779	30672060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
tx.7706	chr3	-	1838	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	53	0	53	0	multi-exon	TRUE	canonical	3	297	junction_6	40.0710618776194	229	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTGAGTTTAGAT	NA	False	NA	NA	False	NA	NA	NA	30701965	30678415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
tx.7707	chr3	+	801	3	NNC	ENSMUSG00000027703.17	novel	2387	8	NA	NA	10821	3	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	6.5	18	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTGGGAAGAATGATA	NA	False	NA	NA	False	NA	NA	NA	30712855	30726583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_30713166_30714049_30714247_30726289
tx.7708	chr3	-	1770	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	-35	-149	-22	149	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCTCATGATACCTTT	NA	False	NA	NA	False	NA	NA	NA	30754014	30733057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
tx.7709	chr3	+	448	4	ISM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	450	11268	-11	8454	5prime_fragment	FALSE	canonical	3	760	junction_3	45.4923681023043	234	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATGGTGAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	30847473	30864144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970
tx.771	chr10	-	1249	9	ISM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	1786	6620	1744	269	3prime_fragment	FALSE	canonical	3	127	junction_4	10.0591997693654	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGACATGTCAATGAGG	NA	False	NA	NA	False	NA	NA	NA	19781649	19736265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590
tx.7710	chr3	+	1706	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-11	59	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	221.180356270624	43	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAGCCATTGGACTCTA	NA	False	NA	NA	False	NA	NA	NA	30847473	30874240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724
tx.7711	chr3	+	2346	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	451	1170	-10	61	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCATTGGACTCTAAT	NA	False	NA	NA	False	NA	NA	NA	30847474	30874242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
tx.7712	chr3	+	1920	3	FSM	ENSMUSG00000037661.15	ENSMUST00000108259.8	1916	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	8	junction_2	143	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30910094	30951339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_30910207_30931383_30931711_30949858
tx.7713	chr3	+	1791	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-47	-1398	-4	0	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30910094	30951339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
tx.7714	chr3	+	1904	5	NIC	ENSMUSG00000037661.15	novel	346	4	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	111.904814463007	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	30910098	30951344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_30910207_30931383_30931482_30944090_30944191_30948277_30948390_30949858
tx.7715	chr3	+	1957	4	NIC	ENSMUSG00000037661.15	novel	2139	4	NA	NA	-16	3	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	76.6130247122221	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	30910121	30951344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30949858
tx.7716	chr3	+	1977	4	FSM	ENSMUSG00000037661.15	ENSMUST00000046748.13	1977	4	-15	15	-15	-15	multi-exon	FALSE	canonical	3	100	junction_2	83.6341238171756	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGGAGATTAGCTCA	NA	False	NA	NA	False	NA	NA	NA	30910122	30951324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_30910207_30931383_30931711_30944090_30944191_30949858
tx.7717	chr3	-	2330	6	NNC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	-47	-5426	intron_retention	FALSE	canonical	3	11	junction_5	45.5692879031481	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGGAGTGTTATATG	NA	False	NA	NA	False	NA	NA	NA	32419874	32394370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419736
tx.7718	chr3	-	2359	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	4	5434	4	-5430	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACTGATGGAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	32419823	32394374	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
tx.7719	chr3	+	1830	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	291	90	15	0	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3197	False	NA	NA	False	NA	NA	NA	32564698	32574892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
tx.772	chr10	+	3808	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	507	-63	-6	-5	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTAGGGTTCCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	20024723	20157331	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
tx.7720	chr3	+	1877	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	111	0	-18	0	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3293	False	NA	NA	False	NA	NA	NA	32564794	32574892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
tx.7721	chr3	-	2283	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	50	3664	-6	2	multi-exon	TRUE	canonical	3	60	junction_8	7.61253028131584	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTACTTTTCCATTTTTG	NA	False	NA	NA	False	NA	NA	NA	32670684	32638144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
tx.7722	chr3	+	1821	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	189	0	-69	0	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	1448	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	32762844	32781122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
tx.7723	chr3	-	881	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	383	2100	383	78	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	365	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTGTTCTTCTAGCT	NA	False	NA	NA	False	NA	NA	NA	32790913	32781645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
tx.7724	chr3	+	674	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	70	335	-11	1	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	2724	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTCTGTGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	32791208	32805380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
tx.7725	chr3	-	1834	11	ISM	ENSMUSG00000027676.12	ENSMUST00000029222.8	3606	20	20	12809	20	-585	5prime_fragment	FALSE	canonical	2	2	junction_3	3.52278299076171	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATTATACTTATTATAG	NA	False	NA	NA	False	NA	NA	NA	33898430	33879319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892114_33893226_33893374_33895217_33895338_33898253
tx.7726	chr3	+	2137	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-13	5	-3	-2	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	646	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTATTTTGTTTTC	4846	False	NA	NA	False	NA	NA	NA	34074243	34123489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
tx.7727	chr3	+	2045	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-13	982	-3	-2	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	460	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTATTTTGTTTTC	4846	False	NA	NA	False	NA	NA	NA	34074243	34123489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
tx.7728	chr3	-	579	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	9	71	0	4	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	1585	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTTGGTATATTTT	NA	False	NA	NA	False	NA	NA	NA	34135461	34131498	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
tx.7729	chr3	+	2033	2	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGCCTTTTACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	34818296	34821252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr3_+_34818433_34819355
tx.773	chr10	+	2105	7	ISM	ENSMUSG00000019996.18	ENSMUST00000116259.5	3831	18	124425	68	3908	0	3prime_fragment	FALSE	canonical	3	250	junction_2	26.2958594121246	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTATTTATTTAAAT	158	False	NA	NA	False	NA	NA	NA	20149154	20157268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
tx.7730	chr3	-	2720	6	ISM	ENSMUSG00000027708.15	ENSMUST00000198389.5	3020	7	8898	160	12	-160	3prime_fragment	FALSE	canonical	3	154	junction_3	20.9513722700925	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATATTTGTGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	35975325	35947814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119
tx.7731	chr3	-	2789	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	634	1557	-2	-156	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTGTGTGGCCTAA	NA	False	NA	NA	False	NA	NA	NA	35986987	35947810	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
tx.7732	chr3	-	2654	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-2	-160	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATATTTGTGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	35986987	35947814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
tx.7733	chr3	-	1549	12	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	15621	0	4875	0	3prime_fragment	FALSE	canonical	3	210	junction_8	28.8042696559594	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGCTGTAGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	36039206	36013981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130
tx.7734	chr3	-	2445	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	10	0	10	0	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGCTGTAGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	36054817	36013981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
tx.7735	chr3	+	2507	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	30	1393	30	88	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGCTCCTCCACTTC	NA	False	NA	NA	False	NA	NA	NA	36120157	36145609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
tx.7736	chr3	+	3220	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	58	3411	58	-3404	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAAACTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	36205223	36221080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
tx.7737	chr3	-	1542	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	189	0	-46	0	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	94	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTAGGTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	36529854	36503071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
tx.7738	chr3	+	1598	12	FSM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	19	0	-2	0	multi-exon	FALSE	canonical	3	373	junction_11	43.5980892749872	298	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGAGCCGAATGAGT	NA	False	NA	NA	False	NA	NA	NA	36606773	36619876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
tx.7739	chr3	-	2770	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	190	5	4	-5	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACCCATTTGGTGGGCT	NA	False	NA	NA	False	NA	NA	NA	36626109	36619018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
tx.774	chr10	+	3236	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-15	2216	0	17	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAAACATTTGACTG	2790	False	NA	NA	False	NA	NA	NA	20188214	20216029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
tx.7740	chr3	-	2597	19	FSM	ENSMUSG00000037325.11	ENSMUST00000108156.9	2687	19	88	2	0	-2	multi-exon	FALSE	canonical	3	20	junction_12	6.84754619472471	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTGTGTCTTTATATA	NA	False	NA	NA	False	NA	NA	NA	36667538	36627292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666160_36666227_36667398
tx.7741	chr3	-	806	4	FSM	ENSMUSG00000037325.11	ENSMUST00000129671.2	1288	4	0	482	0	363	multi-exon	FALSE	canonical	3	23	junction_1	6.97614984548545	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTAATTGTGTGCATTT	NA	False	NA	NA	False	NA	NA	NA	36667538	36663967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_36664505_36664714_36664778_36666160_36666227_36667398
tx.7742	chr3	-	1065	5	FSM	ENSMUSG00000045031.19	ENSMUST00000102955.11	1064	5	2	-3	2	3	multi-exon	TRUE	canonical	3	18	junction_2	3.41869858279434	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCTTCTGGTAGTTAC	NA	False	NA	NA	False	NA	NA	NA	37366593	37362767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_37363331_37363493_37363632_37364085_37364215_37364441_37364589_37366505
tx.7743	chr3	-	910	4	FSM	ENSMUSG00000045031.19	ENSMUST00000075537.7	762	4	-10	-138	-10	0	multi-exon	FALSE	canonical	1	1	junction_1	11.7851130197758	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTATCTTCTGGTAGT	NA	False	NA	NA	False	NA	NA	NA	37366579	37362770	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_37363331_37364085_37364215_37364441_37364589_37366505
tx.7744	chr3	-	795	3	NIC	ENSMUSG00000045031.19	novel	1808	4	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	10	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTAAGTATCTTCTG	NA	False	NA	NA	False	NA	NA	NA	37366598	37362775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_37363331_37364441_37364589_37366505
tx.7745	chr3	+	2450	2	FSM	ENSMUSG00000051444.10	ENSMUST00000057975.8	2433	2	-14	-3	-14	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCATTCTGTTTTTTATT	1237	False	NA	NA	False	NA	NA	NA	37366688	37375602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_37366735_37373198
tx.7746	chr3	-	1080	5	FSM	ENSMUSG00000050174.16	ENSMUST00000052645.13	1155	5	-5	80	-5	-4	multi-exon	FALSE	canonical	1	4	junction_4	11.8743420870379	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGATTGTAGCTCTAA	NA	False	NA	NA	False	NA	NA	NA	37473750	37459138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473490
tx.7747	chr3	+	2899	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	-11	2	-11	-2	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTAGTTTTATCTTGTGC	NA	False	NA	NA	False	NA	NA	NA	37474435	37633243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
tx.7748	chr3	+	2919	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	376	0	-26	0	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	37474420	37633245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
tx.7749	chr3	+	2917	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	-6	5	-6	1	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCTAGTTTTATCTTG	NA	False	NA	NA	False	NA	NA	NA	37474454	37633240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
tx.775	chr10	+	2278	5	ISM	ENSMUSG00000037608.17	ENSMUST00000186100.7	3231	13	0	14106	0	3565	intron_retention	FALSE	canonical	3	760	junction_3	119.710066410474	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTTAAGTTGAATAATAG	2793	False	NA	NA	False	NA	NA	NA	20188217	20201906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885
tx.7750	chr3	+	2116	12	ISM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	11567	0	-193	0	3prime_fragment	FALSE	canonical	3	356	junction_6	34.1769822497903	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	4298	False	NA	NA	False	NA	NA	NA	37486013	37633245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
tx.7751	chr3	+	2248	2	NIC	ENSMUSG00000037211.13	novel	2481	3	NA	NA	-46	-1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGAGTGCATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	37694049	37698746	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_37694255_37696703
tx.7752	chr3	+	1101	3	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	-1	40206	-1	9952	5prime_fragment	FALSE	canonical	3	18	junction_2	50.5	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCAGCAGTGATGAAAGT	NA	False	NA	NA	False	NA	NA	NA	40594914	40618998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_40595159_40608135_40608684_40618689
tx.7753	chr3	+	1151	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	4	50157	4	1	5prime_fragment	FALSE	canonical	3	119	junction_1	0	54	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCACTTGAGAACACC	NA	False	NA	NA	False	NA	NA	NA	40594919	40609047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_40595159_40608135
tx.7754	chr3	+	1606	6	FSM	ENSMUSG00000069041.9	ENSMUST00000091184.9	2128	6	19	503	19	-503	multi-exon	FALSE	canonical	3	17	junction_3	1.93907194296653	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATGAGCCTTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	40663303	40680024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_40663657_40670945_40671074_40674920_40675039_40675936_40676092_40677055_40677182_40679298
tx.7755	chr3	+	1255	5	FSM	ENSMUSG00000025758.11	ENSMUST00000203320.2	1599	5	-46	390	-15	-390	multi-exon	FALSE	canonical	3	337	junction_3	14.0956553590104	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATGGAAGTAATTTTTG	7770	False	NA	NA	False	NA	NA	NA	40754438	40760110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442
tx.7756	chr3	+	3469	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	10	0	1	0	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	7795	False	NA	NA	False	NA	NA	NA	40754463	40771318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
tx.7757	chr3	-	3133	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	2	16	2	-16	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATATTTCCAGTACATA	NA	False	NA	NA	False	NA	NA	NA	40801318	40772553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
tx.7758	chr3	+	1878	7	ISM	ENSMUSG00000025762.17	ENSMUST00000191805.7	1705	10	13342	-351	2341	351	3prime_fragment	FALSE	canonical	3	71	junction_1	8.71779788708135	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGTTAGTATGAAGAATA	NA	False	NA	NA	False	NA	NA	NA	40918407	40932579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
tx.7759	chr3	+	1253	6	ISM	ENSMUSG00000025762.17	ENSMUST00000191805.7	1705	10	16842	-4	-4164	4	3prime_fragment	FALSE	canonical	3	76	junction_3	7.11617874986288	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTAAGGGCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	40921907	40932232	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
tx.776	chr10	+	3086	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	3	2218	0	17	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAAACATTTGACTG	2793	False	NA	NA	False	NA	NA	NA	20188217	20216029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
tx.7760	chr3	-	610	2	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	-7	-1439	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	217	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGGACTCTTAACTGTG	NA	False	NA	NA	False	NA	NA	NA	41447634	41439897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_41440396_41447522
tx.7761	chr3	+	2876	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	1	2604	1	202	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAAATGAAGTAACTTT	NA	False	NA	NA	False	NA	NA	NA	41510166	41568695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
tx.7762	chr3	+	1079	8	NIC	ENSMUSG00000025766.15	novel	4129	8	NA	NA	0	4	combination_of_known_junctions	TRUE	canonical	2	10	junction_7	11.8648855959121	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATTTTGTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	41697048	41713369	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483_41710565_41713058
tx.7764	chr3	-	592	2	FSM	ENSMUSG00000037910.3	ENSMUST00000036023.3	593	2	1	0	1	0	multi-exon	FALSE	canonical	3	53	junction_1	0	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTTTAGATGTGTCT	NA	False	NA	NA	False	NA	NA	NA	48563536	48560166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_48560355_48563132
tx.7765	chr3	-	2909	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	40	-435	-30	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	51184895	51162650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
tx.7766	chr3	-	1242	4	FSM	ENSMUSG00000037161.15	ENSMUST00000038154.12	1232	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	186	junction_2	9.84321537348893	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTAGTCTTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	51303979	51295832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847
tx.7767	chr3	-	1405	4	FSM	ENSMUSG00000037161.15	ENSMUST00000108046.8	1409	4	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_3	91.1604202613295	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTAGTCTTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	51303943	51295832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303648
tx.7768	chr3	-	429	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	31	789	7	-11	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	1687	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGGTCAGTGCTGATG	NA	False	NA	NA	False	NA	NA	NA	51316378	51312886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
tx.7769	chr3	+	540	3	ISM	ENSMUSG00000063273.12	ENSMUST00000192523.6	629	7	-328	33186	-48	-4479	5prime_fragment	FALSE	canonical	3	512	junction_1	21.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAGCTTATGAATTGG	NA	False	NA	NA	False	NA	NA	NA	51323388	51345805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_51323798_51343635_51343721_51345759
tx.777	chr10	+	2747	10	ISM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	10547	-6	-636	3	3prime_fragment	FALSE	canonical	3	695	junction_8	98.1721843384254	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAACTATCAACTTTTA	NA	False	NA	NA	False	NA	NA	NA	20198829	20216015	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
tx.7770	chr3	+	4154	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-18	1954	-18	1813	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	-83	True	NA	NA	NA	51323418	51381452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
tx.7771	chr3	+	2168	15	ISM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-10	14804	-10	-1877	5prime_fragment	FALSE	canonical	3	512	junction_1	35.8955400560901	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCAGCAACGGAATCA	NA	False	NA	-75	True	NA	NA	NA	51323426	51368602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504
tx.7772	chr3	-	2194	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	220	4997	220	-4997	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTACAGTCTGGCTTGT	NA	False	NA	NA	False	NA	NA	NA	51468080	51427736	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
tx.7773	chr3	+	1247	5	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	10.8253175473055	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGGGGGAAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	51509158	51533493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr3_+_51509432_51518972_51519090_51532025_51532159_51532710_51533027_51533085
tx.7774	chr3	+	1008	4	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	12.5521135891752	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGGGGGAAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	51509158	51533493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr3_+_51509310_51532025_51532159_51532710_51533027_51533085
tx.7775	chr3	+	1130	4	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	11.5181016954473	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGGGGGAAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	51509158	51533493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr3_+_51509432_51532025_51532159_51532710_51533027_51533085
tx.7776	chr3	-	2918	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	17	247	-2	0	multi-exon	TRUE	canonical	3	106	junction_7	14.5610676585896	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	NA	False	NA	NA	NA	52924641	52889542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
tx.7777	chr3	-	3988	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	-1	1060	-1	-1055	multi-exon	FALSE	canonical	3	23	junction_4	5.77350269189626	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACCTGGCTCCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	53370754	53357063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
tx.7778	chr3	-	1593	5	FSM	ENSMUSG00000027746.14	ENSMUST00000148338.8	381	5	19	-1231	19	1231	multi-exon	FALSE	canonical	3	324	junction_3	16.1012421881046	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTTCAGGAACAGTT	NA	False	NA	NA	False	NA	NA	NA	53771091	53764011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034
tx.7779	chr3	-	1648	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	23	3219	23	1227	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAATGTCTTCAGGAAC	NA	False	NA	NA	False	NA	NA	NA	53771228	53764015	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
tx.778	chr10	+	400	2	ISM	ENSMUSG00000037608.17	ENSMUST00000188546.2	834	4	6500	-77	6500	17	3prime_fragment	FALSE	canonical	3	1025	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAAACATTTGACTG	7059	False	NA	NA	False	NA	NA	NA	20215499	20216029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_20215668_20215797
tx.7780	chr3	+	1195	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	13	multi-exon	FALSE	canonical	2	72	junction_1	0	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTCAACATGCTTAG	5417	False	NA	NA	False	NA	NA	NA	54388835	54390359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr3_+_54389536_54389864
tx.7781	chr3	+	1165	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-7	13	multi-exon	TRUE	canonical	1	173	junction_1	0	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTCAACATGCTTAG	5455	False	NA	NA	False	NA	NA	NA	54388873	54390359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr3_+_54389605_54389925
tx.7782	chr3	-	955	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	345	0	-2	0	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	1301	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	NA	False	NA	NA	NA	54642469	54636098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
tx.7783	chr3	-	912	10	ISM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	1061	2	5	1	3prime_fragment	FALSE	canonical	3	1829	junction_6	127.661976511856	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTAGTCCTTACGTTG	NA	False	NA	NA	False	NA	NA	NA	54641753	54636100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716
tx.7784	chr3	+	1076	10	NNC	ENSMUSG00000036632.10	novel	1471	10	NA	NA	1	-358	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	162.856295056428	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGTATATTCTTG	NA	False	NA	NA	False	NA	NA	NA	54642960	54656858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649625_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
tx.7785	chr3	+	1093	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	20	358	0	-358	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	394	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGTATATTCTTG	NA	False	NA	NA	False	NA	NA	NA	54642979	54656858	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
tx.7786	chr3	-	1746	3	Antisense	novelGene_ENSMUSG00000027796.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATGGGAGTAGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	54693694	54684900	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr3_-_54686439_54687703_54687821_54693603
tx.7787	chr3	+	1065	4	ISM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	30414	3640	30414	-3640	3prime_fragment	FALSE	canonical	3	10	junction_1	2.62466929133727	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTTTATATCACCGTT	322	False	NA	NA	False	NA	NA	NA	54693416	54705038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_54693743_54696606_54696829_54701652_54701910_54704778
tx.7788	chr3	-	1882	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	280	0	-91	0	multi-exon	FALSE	canonical	3	271	junction_1	17.5	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTCTGCTGTACTTATTT	NA	False	NA	NA	False	NA	NA	NA	54714932	54710535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_54711997_54712780_54712889_54714619
tx.7789	chr3	+	440	3	Antisense	novelGene_ENSMUSG00000056306.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGGCCATTCTCGTGTG	NA	False	NA	NA	False	NA	NA	NA	54794218	54807704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr3_+_54794305_54794833_54794945_54807461
tx.779	chr10	+	2010	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	31	-50	-18	50	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTATTTTGTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	20223546	20237100	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
tx.7790	chr3	+	2405	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	5	1360	0	-1349	multi-exon	TRUE	canonical	0	0	junction_4	65.469339197826	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACCTATTTTTGTATG	NA	False	NA	NA	False	NA	NA	NA	55019533	55043383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
tx.7791	chr3	+	2356	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	5	3	5	-3	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGTGTGCAAGGAATCT	NA	False	NA	NA	False	NA	NA	NA	55089453	55117375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
tx.7792	chr3	-	2084	3	NNC	ENSMUSG00000027803.15	novel	4697	7	NA	NA	22	-117310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.5	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCGATGGTCCCTTTTGG	NA	False	NA	NA	False	NA	NA	NA	57483227	57480512	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_57482282_57482569_57482679_57483021
tx.7793	chr3	-	975	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	10	2007	3	3	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	506	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTCTAGACAGTTCAAT	NA	False	NA	NA	False	NA	NA	NA	57559126	57553776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
tx.7794	chr3	+	2407	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	2	-288	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	55.1311164407179	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATTGTTCTGGTGAA	NA	False	NA	NA	False	NA	NA	NA	57643497	57742252	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_57643622_57655311_57655456_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
tx.7795	chr3	+	2263	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	19	396	-1	-284	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTCTGGTGAACTCT	NA	False	NA	NA	False	NA	NA	NA	57643501	57742256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
tx.7796	chr3	+	1227	9	FSM	ENSMUSG00000036503.14	ENSMUST00000199041.2	1062	9	-38	-127	0	127	multi-exon	FALSE	canonical	3	113	junction_8	24.8281594162757	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGCACCTGTTAATACT	NA	False	NA	NA	False	NA	NA	NA	57643502	57740780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384
tx.7797	chr3	-	1817	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	518	7	-12	3	multi-exon	FALSE	canonical	3	22	junction_1	7	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCATTGGACTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	57754982	57749322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_57750736_57752594_57752788_57754771
tx.7798	chr3	-	2440	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	19	2152	19	-2152	multi-exon	FALSE	canonical	3	847	junction_1	36.5	202	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGCAGAGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	58433294	58429389	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_58431290_58432503_58432580_58432830
tx.7799	chr3	+	2553	6	ISM	ENSMUSG00000027810.15	ENSMUST00000137469.8	1035	9	-72	2118	-72	-1906	5prime_fragment	FALSE	canonical	3	689	junction_1	57.531208921767	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	58433390	58451126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054
tx.78	chr1	+	1975	12	NNC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	305	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0288908414713	13	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTCTCATCTTCCCT	NA	False	NA	NA	False	NA	NA	NA	36810377	36821899	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_36810664_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36817884_36818197_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
tx.780	chr10	+	1864	6	ISM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	564	-26	327	26	3prime_fragment	FALSE	canonical	3	158	junction_4	13.6674796506159	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCTTACTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	20224079	20237076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
tx.7800	chr3	+	2150	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	149	0	-72	0	multi-exon	TRUE	canonical	3	611	junction_6	73.3195163601748	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	58433390	58464922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
tx.7801	chr3	+	1193	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	45	1919	-17	-1919	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGAATACTCTACTCT	NA	False	NA	NA	False	NA	NA	NA	58484101	58498635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
tx.7802	chr3	+	1738	2	FSM	ENSMUSG00000027694.10	ENSMUST00000193411.2	182	2	-12	-1544	-12	1271	multi-exon	FALSE	canonical	3	1840	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGACTACTTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	60784422	60786279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_60784468_60784586
tx.7803	chr3	+	1121	3	NNC	ENSMUSG00000027820.13	novel	615	6	NA	NA	-68	-79613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTCTGTCACTTCATA	NA	False	NA	-59	True	NA	NA	NA	63148889	63155634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_63148988_63150636_63150788_63154762
tx.7804	chr3	+	1046	9	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-21	-4477	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	55.9797675504284	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAATGTAACACATATT	NA	False	NA	NA	False	NA	NA	NA	63202847	63247563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436
tx.7805	chr3	+	3509	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	13	-200	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCTGTGTGCACGCCA	NA	False	NA	NA	False	NA	NA	NA	63202881	63288844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
tx.7807	chr3	+	3547	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	32	203	32	-203	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGGCCTGTGTGCACG	NA	False	NA	NA	False	NA	NA	NA	63203547	63288841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
tx.7808	chr3	-	1563	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	77	0	-4	0	multi-exon	FALSE	canonical	3	41	junction_2	6.68487097856047	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTCTGAGATCACTC	NA	False	NA	NA	False	NA	NA	NA	63836816	63822104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
tx.7809	chr3	-	2994	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	156	0	54	0	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAAGCTGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	63872033	63849750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
tx.781	chr10	+	2639	5	FSM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	-24	10	-4	-7	multi-exon	FALSE	canonical	3	88	junction_4	452.231688407613	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAGTATGTTTGCATG	NA	False	NA	NA	False	NA	NA	NA	21171912	21187098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997
tx.7810	chr3	+	2242	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	37	5826	37	-5826	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	321	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTAACTGAGGCTCA	NA	False	NA	NA	False	NA	NA	NA	63883563	63924174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
tx.7811	chr3	-	3890	4	FSM	ENSMUSG00000027828.13	ENSMUST00000119896.2	1469	4	-48	-2373	22	-2	multi-exon	FALSE	canonical	3	545	junction_3	65.0281990114033	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTTTTCTGTAATT	2738	False	NA	NA	False	NA	NA	NA	65300022	65287077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_65290545_65295152_65295252_65298745_65298873_65299825
tx.7812	chr3	-	2920	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	33	4	33	-4	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTGTTTTTCTGTAA	2749	False	NA	NA	False	NA	NA	NA	65300011	65287079	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
tx.7813	chr3	+	2442	3	FSM	ENSMUSG00000074579.15	ENSMUST00000099075.4	2461	3	18	1	0	-1	multi-exon	FALSE	canonical	3	10	junction_2	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTGTGTGTAATTATT	NA	False	NA	NA	False	NA	NA	NA	65573666	65593599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_65573733_65576510_65576600_65591312
tx.7815	chr3	+	141	2	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTCCCAGAAGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	66541461	66543529	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr3_+_66541556_66543482
tx.7816	chr3	+	1783	10	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	-16	401	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	104.560455665079	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGATTTGTATCACGCGTTC	NA	False	NA	NA	False	NA	NA	NA	66892986	67264293	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_66893116_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
tx.7817	chr3	+	3224	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	1	-1	1	0	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGACTGCTTCCTCCC	NA	False	NA	NA	False	NA	NA	NA	66893005	67265729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
tx.782	chr10	+	2758	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-19	-6	-4	6	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAAATGTGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	21171912	21244788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
tx.7820	chr3	+	1094	7	FSM	ENSMUSG00000048416.16	ENSMUST00000077916.12	1114	7	25	-5	-3	0	multi-exon	FALSE	canonical	3	41	junction_1	4.04145188432738	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTAAATTGGTCAACC	NA	False	NA	NA	False	NA	NA	NA	67281454	67307336	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_67281596_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
tx.7821	chr3	+	2600	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	17	1461	-3	264	multi-exon	TRUE	canonical	0	0	junction_6	154.691388272057	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATATATAATATTATATA	NA	False	NA	NA	False	NA	NA	NA	67337445	67382401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
tx.7823	chr3	-	1108	6	FSM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	4	0	4	0	multi-exon	FALSE	canonical	3	160	junction_4	5.56417109729742	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGTCTAATTGCATTGTA	NA	False	NA	NA	False	NA	NA	NA	67371255	67365330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
tx.7824	chr3	+	848	5	ISM	ENSMUSG00000027774.17	ENSMUST00000160529.2	924	7	11353	-264	11353	264	3prime_fragment	FALSE	canonical	3	431	junction_1	44.6626241951814	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATATATAATATTATATA	985	False	NA	NA	False	NA	NA	NA	67375164	67382401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
tx.7825	chr3	+	2993	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	14	4	14	-4	multi-exon	TRUE	canonical	3	661	junction_4	69.2886394407882	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATTTGGAGGATAAATGA	NA	False	NA	NA	False	NA	NA	NA	67490087	67511566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
tx.7826	chr3	+	2547	12	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	5188	7	3183	-7	3prime_fragment	FALSE	canonical	3	740	junction_9	52.3126329890585	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCTATTTGGAGGATAAA	NA	False	NA	NA	False	NA	NA	NA	67495261	67511563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
tx.7827	chr3	+	2123	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	34	-1	34	0	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	False	NA	NA	False	NA	NA	NA	68401574	68533797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
tx.7828	chr3	+	1971	7	ISM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	387	2	387	-2	3prime_fragment	FALSE	canonical	3	341	junction_1	53.0830062784273	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACGTCCTTTTGCTCAC	NA	False	NA	NA	False	NA	NA	NA	68401927	68533794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
tx.7829	chr3	+	1582	7	FSM	ENSMUSG00000027777.16	ENSMUST00000170788.9	1730	7	145	3	145	-2	multi-exon	FALSE	canonical	3	114	junction_1	136.891684675634	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACGTCCTTTTGCTCAC	NA	False	NA	NA	False	NA	NA	NA	68479722	68533794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_68479997_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
tx.783	chr10	+	1089	3	FSM	ENSMUSG00000050844.6	ENSMUST00000057341.6	1062	3	-26	-1	-26	1	multi-exon	TRUE	canonical	3	7	junction_2	4.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGACTCTGTCTTATT	NA	False	NA	NA	False	NA	NA	NA	21469017	21498276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_21469134_21469230_21469472_21497544
tx.7830	chr3	+	1484	10	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	245	13283	-8	-60	5prime_fragment	FALSE	canonical	3	521	junction_3	56.5844719789431	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAGGTCATGGACAG	NA	False	NA	NA	False	NA	NA	NA	68912315	68928673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568
tx.7831	chr3	+	4071	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	245	0	-8	0	multi-exon	FALSE	canonical	3	521	junction_3	142.05353233605	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	68912315	68941956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
tx.7832	chr3	+	1705	10	ISM	ENSMUSG00000034349.15	ENSMUST00000148385.8	4057	24	22825	0	-2540	0	3prime_fragment	FALSE	canonical	3	677	junction_4	120.39379828989	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	68935165	68941956	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
tx.7836	chr3	-	1952	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	50	26	50	-26	multi-exon	FALSE	canonical	3	41	junction_2	5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGTATAGTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	69506243	69481516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_69483294_69486658_69486725_69506134
tx.7837	chr3	+	1764	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	45	7326	-2	5	multi-exon	FALSE	canonical	3	839	junction_3	66.7311687960648	374	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGGTTTCATAA	NA	False	NA	NA	False	NA	NA	NA	69629362	69656380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
tx.7838	chr3	+	667	6	ISM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	19643	7326	-4804	5	3prime_fragment	FALSE	canonical	3	898	junction_3	50.0135981509029	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGGTTTCATAA	NA	False	NA	NA	False	NA	NA	NA	69648960	69656380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
tx.7839	chr3	-	1397	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	47	483	2	303	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	197	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTCCTTAATCACTT	NA	False	NA	NA	False	NA	NA	NA	75464116	75424279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
tx.784	chr10	+	2439	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	17	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	88.4218850289119	189	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	NA	False	NA	NA	NA	21870581	21875802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
tx.7840	chr3	+	1804	9	FSM	ENSMUSG00000027834.16	ENSMUST00000029423.9	4091	9	-11	2298	-11	-2298	multi-exon	FALSE	canonical	3	8	junction_2	2.1650635094611	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTGAAGGGGAGGCCA	NA	False	NA	NA	False	NA	NA	NA	75464842	75548504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_75464950_75520386_75520655_75521760_75521992_75523874_75524070_75526425_75526631_75531165_75531264_75545224_75545312_75547555_75547646_75547981
tx.7841	chr3	-	1907	2	NIC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-20	0	intron_retention	FALSE	canonical	3	230	junction_1	0	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	75563058	75554752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_75556298_75562696
tx.7842	chr3	-	1838	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	5	intron_retention	FALSE	canonical	3	11	junction_2	109.5	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTCATGGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	75563059	75554747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_75556298_75562696_75562888_75562962
tx.7843	chr3	-	960	4	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	82.6411250864577	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	75563097	75554752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_75555246_75556106_75556298_75562696_75562869_75562993
tx.7844	chr3	-	1252	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	-137	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	79.5	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTCTCCATTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	75563059	75555283	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_75556298_75562696_75562869_75562993
tx.7845	chr3	+	1740	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	10	2	10	-2	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	269	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGGATGTCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	79498681	79510955	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
tx.785	chr10	-	671	3	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	118	junction_1	2.5	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGGTGTCAGTGGCTC	NA	False	NA	NA	False	NA	NA	NA	21934521	21930760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_-_21931017_21933427_21933570_21934248
tx.7853	chr3	+	1784	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	4	63	4	3	multi-exon	TRUE	canonical	3	670	junction_6	49.0312790627637	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTTTATTTCTGAAA	NA	False	NA	NA	False	NA	NA	NA	82962832	82979599	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
tx.7855	chr3	-	863	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	12	0	12	0	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	84063081	83995239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
tx.786	chr10	-	536	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181677.2	617	2	-223	304	-10	-304	multi-exon	FALSE	canonical	3	6	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTCTTGGTCTCAAAT	NA	False	NA	NA	False	NA	NA	NA	22024732	21993564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_21993756_22024387
tx.7862	chr3	-	890	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	82	5	82	-5	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	5860	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	NA	NA	NA	86049927	86045251	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
tx.7863	chr3	+	763	2	FSM	ENSMUSG00000103408.2	ENSMUST00000193964.2	981	2	-17	235	-17	-235	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGACTAGTCACGCCT	9231	False	NA	NA	False	NA	NA	NA	86050046	86052617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_86050513_86052320
tx.7864	chr3	-	3563	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	-71	-6	-27	0	multi-exon	FALSE	canonical	3	155	junction_11	36.9688156874593	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	NA	False	NA	NA	NA	86827713	86693459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
tx.7865	chr3	+	1547	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	-17	-3	-17	3	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTGTTTTATTAAAT	NA	False	NA	NA	False	NA	NA	NA	86893840	86897090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
tx.7866	chr3	-	503	3	Antisense	novelGene_ENSMUSG00000048031.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTTTTCTTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	87419996	87394327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr3_-_87394637_87419414_87419491_87419878
tx.7867	chr3	-	2061	7	FSM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	27	11	27	-11	multi-exon	FALSE	canonical	3	312	junction_5	35.6401770789964	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGCCTACAAGGTGTC	2326	False	NA	NA	False	NA	NA	NA	87792888	87766220	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
tx.7868	chr3	+	1615	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	247	383	247	-383	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAAAGTTGCCCCGCCC	NA	False	NA	NA	False	NA	NA	NA	87813874	87823056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
tx.7869	chr3	+	1687	4	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	7073	6	-567	-6	3prime_fragment	FALSE	canonical	3	2720	junction_3	214.059700914384	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATTCTGACTAATTCT	NA	False	NA	NA	False	NA	NA	NA	87820700	87823433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_87820759_87821358_87821545_87821779_87821998_87822208
tx.787	chr10	-	562	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181614.2	548	2	-10	-4	-10	4	multi-exon	FALSE	canonical	3	41	junction_1	0	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCCTTGGTTTTATCA	NA	False	NA	NA	False	NA	NA	NA	22024732	22020196	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_22020414_22024387
tx.7870	chr3	+	1561	3	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	7799	6	159	-6	3prime_fragment	FALSE	canonical	3	2720	junction_2	44.5	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATTCTGACTAATTCT	NA	False	NA	-30	True	NA	NA	NA	87821426	87823433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_87821545_87821779_87821998_87822208
tx.7871	chr3	+	1445	2	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	8150	6	510	-6	3prime_fragment	FALSE	canonical	3	2720	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATTCTGACTAATTCT	NA	False	NA	NA	False	NA	NA	NA	87821777	87823433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_87821998_87822208
tx.7872	chr3	+	969	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	35	222	5	-212	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	158	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGCCTCTCCCAAGT	NA	False	NA	NA	False	NA	NA	NA	87826847	87830757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
tx.7873	chr3	+	1089	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	38	212	8	-212	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	224	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGCCTCTCCCAAGT	NA	False	NA	NA	False	NA	NA	NA	87826850	87830757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
tx.7874	chr3	-	2062	8	NIC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-11	10	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	34.3926902532667	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCATGGCCTCCATCACA	9432	False	NA	NA	False	NA	NA	NA	87837462	87830612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
tx.7875	chr3	+	903	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	28	0	28	0	multi-exon	FALSE	canonical	3	31	junction_1	3.29983164553722	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGCTCCCTGAG	8859	False	NA	NA	False	NA	NA	NA	87856000	87860683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
tx.7876	chr3	+	2262	2	Genic_Genomic	ENSMUSG00000105843.2	novel	2273	1	NA	NA	-76	1145	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAAACAGTTGGGTTAG	5934	False	NA	NA	False	NA	NA	NA	87938108	87941602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr3_+_87938344_87939575
tx.7877	chr3	+	1767	9	FSM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	1	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	81.6783898898601	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGTTTTGTTTTTGA	1720	False	NA	NA	False	NA	NA	NA	87950415	87963300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_87950487_87950773_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
tx.7878	chr3	+	1632	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	1	-3	0	0	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	79	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGTTTTGTTTTTGA	1720	False	NA	NA	False	NA	NA	NA	87950415	87963300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
tx.7879	chr3	-	931	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	-23	0	-23	0	multi-exon	TRUE	canonical	3	839	junction_3	34.2963554915096	460	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	NA	False	NA	NA	NA	87965825	87963826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
tx.788	chr10	+	1608	9	FSM	ENSMUSG00000053219.16	ENSMUST00000181645.8	1579	9	-29	0	-29	0	multi-exon	FALSE	canonical	3	14	junction_1	39.8708853676464	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	22034438	22059816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
tx.7880	chr3	-	1369	8	ISM	ENSMUSG00000104445.2	ENSMUST00000171887.4	1937	10	6837	175	6837	-175	3prime_fragment	TRUE	canonical	2	4	junction_4	1.39970842444753	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTTGGGTCCACAGAAC	6135	False	NA	NA	False	NA	NA	NA	88155179	88150355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_88150756_88150899_88150974_88151831_88151954_88152439_88152574_88152742_88152881_88153121_88153289_88154738_88154887_88154993
tx.7881	chr3	-	486	4	FSM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	101	-3	-2	3	multi-exon	TRUE	canonical	3	152	junction_3	20.138409955991	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGGTCTGAGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	88204205	88190060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88190292_88194404_88194525_88202697_88202758_88204130
tx.7882	chr3	+	1970	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	7	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	1476	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3811	False	NA	NA	False	NA	NA	NA	88204429	88229074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
tx.7883	chr3	+	1554	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	25	2640	-7	92	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	219	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATTTGTGAGTCTTT	4020	False	NA	NA	False	NA	NA	NA	88232354	88235980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
tx.7884	chr3	-	2404	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	12	-10	12	10	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACTGGAAATCTTGTA	NA	False	NA	NA	False	NA	NA	NA	88241799	88235951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
tx.7885	chr3	+	1189	5	ISM	ENSMUSG00000001415.11	ENSMUST00000192057.6	3119	12	-41	6786	10	-1653	5prime_fragment	FALSE	canonical	3	289	junction_3	7.49583217528247	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTCAGAGATGCATGGT	NA	False	NA	NA	False	NA	NA	NA	88243576	88253250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669
tx.7886	chr3	-	1048	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	-36	-5	-36	5	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	384	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGGAGGTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	88317674	88301444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
tx.7887	chr3	-	3563	4	FSM	ENSMUSG00000050144.14	ENSMUST00000057935.9	3577	4	18	-4	-9	3	multi-exon	FALSE	canonical	3	53	junction_3	3.85861230093008	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4084	False	NA	NA	False	NA	NA	NA	88332428	88317801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332034
tx.7888	chr3	-	1976	5	FSM	ENSMUSG00000028064.18	ENSMUST00000156108.8	2108	5	135	-3	135	0	multi-exon	TRUE	canonical	3	30	junction_4	4.71036092035419	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATGGCGTGCTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	88348311	88343265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004
tx.7889	chr3	-	2206	7	FSM	ENSMUSG00000028064.18	ENSMUST00000149145.2	2357	7	154	-3	154	0	multi-exon	FALSE	canonical	2	6	junction_6	14.3614066163451	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATGGCGTGCTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	88357191	88343265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986
tx.789	chr10	+	1471	8	NIC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	12	2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	37.3625371685793	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTCCAGAAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	22034479	22059818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_22034618_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
tx.7890	chr3	-	2023	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	100	junction_5	22.6377811589932	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	88410616	88390511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
tx.7891	chr3	-	1080	4	ISM	ENSMUSG00000008601.13	ENSMUST00000008745.13	1081	5	2778	-1	-2008	1	3prime_fragment	TRUE	canonical	3	11	junction_1	1.69967317119759	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCCTTCCATCTGT	8479	False	NA	NA	False	NA	NA	NA	88452829	88449334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_88449678_88450007_88450089_88450626_88450821_88452367
tx.7892	chr3	-	1084	5	FSM	ENSMUSG00000008601.13	ENSMUST00000008745.13	1081	5	-2	-1	-2	1	multi-exon	FALSE	canonical	1	1	junction_4	5.2618912949623	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCCTTCCATCTGT	5699	False	NA	NA	False	NA	NA	NA	88455609	88449334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88449678_88450007_88450089_88450626_88450821_88452367_88452564_88455339
tx.7893	chr3	-	582	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	86	0	-45	0	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	696	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1063	False	NA	NA	False	NA	NA	NA	88460245	88457125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
tx.7894	chr3	+	3334	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	-4	0	-4	0	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6101	False	NA	NA	False	NA	NA	NA	88461060	88477032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
tx.7895	chr3	+	3175	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_4	451.412707063908	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6101	False	NA	NA	False	NA	NA	NA	88461060	88477032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
tx.7896	chr3	+	1390	6	FSM	ENSMUSG00000008604.12	ENSMUST00000194303.6	1379	6	2	-13	2	13	multi-exon	FALSE	canonical	3	1330	junction_4	125.024797540328	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGATACCATCCAGT	6113	False	NA	NA	False	NA	NA	NA	88461072	88470880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414
tx.7897	chr3	+	1040	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	18	1	-15	-1	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	3240	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	3575	False	NA	NA	False	NA	NA	NA	88486932	88495725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
tx.7898	chr3	+	1360	6	ISM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	-42	7415	-12	6136	5prime_fragment	FALSE	canonical	3	378	junction_1	24.9847953763884	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTAAGATAGGTACATG	-4	True	NA	NA	False	NA	NA	NA	88593097	88601505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727
tx.7899	chr3	+	2973	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	8	0	-3	0	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATGTGCATTGTT	16	False	NA	NA	False	NA	NA	NA	88593117	88620231	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
tx.79	chr1	+	1456	9	ISM	ENSMUSG00000050122.20	ENSMUST00000238425.2	4095	29	71275	46269	-60	0	internal_fragment	TRUE	canonical	3	35	junction_7	9.96164519544839	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGATTTCTCCCTCA	NA	False	NA	NA	False	NA	NA	NA	37139688	37180417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
tx.790	chr10	+	1308	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	-31	-3	-31	0	multi-exon	FALSE	canonical	3	64	junction_1	14.8286509463568	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	22049388	22059816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
tx.7900	chr3	+	1162	6	FSM	ENSMUSG00000028057.15	ENSMUST00000172333.8	993	6	-52	-117	9	-62	multi-exon	FALSE	canonical	2	5	junction_2	24.0881713710277	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGTACCGTGTGCA	2226	False	NA	NA	False	NA	NA	NA	88624153	88636972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88624265_88624632_88624778_88624879_88624966_88633301_88633376_88633586_88633779_88636418
tx.7901	chr3	+	1119	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	23	62	-15	-62	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGTACCGTGTGCA	2240	False	NA	NA	False	NA	NA	NA	88624167	88636972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
tx.7902	chr3	+	824	4	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	0	8225	combination_of_known_junctions	FALSE	canonical	3	78	junction_3	45.1540572804802	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAGGGTACTAAGAGG	NA	False	NA	NA	False	NA	NA	NA	88742534	88761947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908
tx.7903	chr3	-	1206	8	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	2119	27	194	2	3prime_fragment	FALSE	canonical	3	691	junction_7	37.5499667110372	136	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTGTAGGGACCTGT	NA	False	NA	NA	False	NA	NA	NA	88819187	88816948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070
tx.7904	chr3	-	1775	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	73	27	5	2	multi-exon	FALSE	canonical	3	676	junction_13	37.3331396162909	247	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTGTAGGGACCTGT	NA	False	NA	NA	False	NA	NA	NA	88821233	88816948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
tx.7905	chr3	-	1478	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	450	2832	-13	0	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	496	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	NA	False	NA	NA	NA	88857271	88830941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
tx.7906	chr3	-	1385	11	FSM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	-3	0	0	0	multi-exon	FALSE	canonical	3	68	junction_10	899.425283166979	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	89009198	89000894	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227_89008444_89009168
tx.7907	chr3	-	1192	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	45	0	-23	0	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	2127	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	89009221	89000894	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
tx.7908	chr3	+	1593	11	ISM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	3937	0	1613	0	3prime_fragment	FALSE	canonical	3	250	junction_1	92.5635457402103	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	89076083	89084228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
tx.7909	chr3	+	2163	9	ISM	ENSMUSG00000068917.13	ENSMUST00000128318.8	1885	12	3798	0	1613	0	intron_retention	FALSE	canonical	3	39	junction_1	165.199689769684	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	89076083	89084228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
tx.791	chr10	+	1311	7	NNC	ENSMUSG00000078452.11	novel	1271	7	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	16.5672032106274	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	22237774	22250038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_22237831_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
tx.7910	chr3	+	1294	8	ISM	ENSMUSG00000068917.13	ENSMUST00000128318.8	1885	12	5311	0	-1875	0	3prime_fragment	FALSE	canonical	3	409	junction_7	61.9789299286624	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	89077596	89084228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
tx.7911	chr3	+	896	5	ISM	ENSMUSG00000068917.13	ENSMUST00000128318.8	1885	12	9982	0	-74	0	3prime_fragment	FALSE	canonical	3	409	junction_4	74.4865759717816	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	89082267	89084228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
tx.7912	chr3	+	1480	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	9	0	-8	0	multi-exon	TRUE	canonical	3	743	junction_2	141.598022585063	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	89084788	89090072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
tx.7913	chr3	+	1469	9	FSM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	6	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	249.13701049824	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	89084802	89090072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
tx.7914	chr3	+	1791	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	-3	-9	-3	7	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATCTGTGACTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	89110231	89115995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
tx.7915	chr3	+	1962	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	-17	-7	-5	7	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATCTGTGACTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	89110229	89115995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
tx.7916	chr3	-	1091	8	FSM	ENSMUSG00000064068.16	ENSMUST00000239452.2	1522	8	428	3	0	2	multi-exon	FALSE	canonical	3	739	junction_1	39.053077434984	793	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAAAGAATCCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	89121214	89116390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
tx.7917	chr3	+	525	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	464	183	-4	1	multi-exon	FALSE	canonical	3	1428	junction_1	178.055293378209	980	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7587	False	NA	NA	False	NA	NA	NA	89153736	89157030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
tx.7918	chr3	+	383	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	23	-2	23	0	multi-exon	FALSE	canonical	3	539	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTAGTTTTGAGTAT	6800	False	NA	NA	False	NA	NA	NA	89173881	89174386	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89173914_89174035
tx.7919	chr3	-	992	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	30	0	-14	0	multi-exon	FALSE	canonical	3	127	junction_5	11.5481600266016	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	89177847	89175552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
tx.792	chr10	-	2667	7	NNC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	90.384364429548	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAAGTTTTAAGTATTC	NA	False	NA	NA	False	NA	NA	NA	22607250	22579782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587886_22607014
tx.7920	chr3	-	1103	5	FSM	ENSMUSG00000027953.14	ENSMUST00000132445.8	1086	5	-17	0	-14	0	multi-exon	FALSE	canonical	3	127	junction_4	12.4373429638327	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	89177847	89175552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177447_89177692
tx.7921	chr3	-	1334	4	FSM	ENSMUSG00000027953.14	ENSMUST00000144777.8	1332	4	0	-2	0	0	multi-exon	FALSE	canonical	3	133	junction_3	10.1434160364686	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	89177832	89175552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133
tx.7922	chr3	-	1486	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	-8	2	-8	1	multi-exon	FALSE	canonical	3	14	junction_2	2.77263412660235	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCCCACCA	1658	False	NA	NA	False	NA	NA	NA	89186960	89179041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
tx.7923	chr3	-	1703	5	NNC	ENSMUSG00000028039.12	novel	2363	5	NA	NA	1004	-581	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	82.3179810248041	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTGTGTGTGGTTTCA	9999	False	NA	NA	False	NA	NA	NA	89227934	89221786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89227753
tx.7924	chr3	-	1625	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	-23	-3	-23	3	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCTTTGTGTGGCCCTC	1589	False	NA	NA	False	NA	NA	NA	89245358	89240693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
tx.7925	chr3	-	1071	6	FSM	ENSMUSG00000028041.18	ENSMUST00000155295.8	1034	6	-36	-1	0	1	multi-exon	FALSE	canonical	3	122	junction_5	16.0549057923116	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGGTTTTGATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	89257303	89253833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
tx.7926	chr3	-	2166	4	NIC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	15	-1645	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	12.2836838484589	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGTATATATATATG	NA	False	NA	NA	False	NA	NA	NA	89300970	89286595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300783
tx.7927	chr3	+	505	2	FSM	ENSMUSG00000074466.13	ENSMUST00000145400.8	923	2	418	0	298	0	multi-exon	FALSE	canonical	3	16	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTAGGGTTGTTT	5675	False	NA	NA	False	NA	NA	NA	89299574	89305531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89299814_89305265
tx.7928	chr3	-	1786	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	-7	1113	0	-415	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3737	False	NA	NA	False	NA	NA	NA	89319177	89310388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
tx.7929	chr3	-	744	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	105	0	-59	0	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	1709	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	False	NA	NA	False	NA	NA	NA	89325585	89322778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89323271_89323580_89323709_89325461
tx.793	chr10	-	1291	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	96	1486	10	16	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATTCTGTAACTTTTA	NA	False	NA	NA	False	NA	NA	NA	22607250	22581263	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
tx.7930	chr3	+	3141	13	FSM	ENSMUSG00000042626.14	ENSMUST00000191485.7	3154	13	1	12	1	0	multi-exon	TRUE	canonical	3	256	junction_1	89.6222008705928	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	NA	False	NA	NA	NA	89325858	89337322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
tx.7931	chr3	+	2966	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	NA	False	NA	NA	NA	89325865	89337322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
tx.7932	chr3	+	3536	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	-3	-916	-3	0	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	NA	False	NA	NA	NA	89328931	89337322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
tx.7933	chr3	+	2491	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-1	-1989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.4145135932695	21	5	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAGAAGAAGAAAAAAAAA	4373	False	NA	NA	False	NA	NA	NA	89344017	89356270	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
tx.7934	chr3	+	1321	2	ISM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	10530	1989	10480	-1989	3prime_fragment	FALSE	canonical	3	93	junction_1	0	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAGAAGAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89354542	89356270	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_89355573_89355979
tx.7935	chr3	+	972	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	29	26521	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	230.312152306386	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGGCTGTGTTGTCTC	169	False	NA	NA	False	NA	NA	NA	89366453	89402841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402534
tx.7936	chr3	+	1124	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	66	4	66	0	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	479	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAGCTGGAGACTGAT	206	False	NA	NA	False	NA	NA	NA	89366490	89376316	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
tx.7937	chr3	+	1573	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	248	1256	4	0	multi-exon	TRUE	canonical	3	944	junction_1	76.7428968844819	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTCTTGACTCATC	NA	False	NA	NA	False	NA	NA	NA	89681170	89690051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
tx.7938	chr3	+	1100	9	ISM	ENSMUSG00000042572.13	ENSMUST00000196726.2	1650	13	5178	0	5178	0	3prime_fragment	FALSE	canonical	3	945	junction_8	66.8214739062227	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTCTTGACTCATC	NA	False	NA	NA	False	NA	NA	NA	89686772	89690051	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
tx.7939	chr3	-	1056	6	ISM	ENSMUSG00000027944.14	ENSMUST00000198782.2	855	7	292	-172	265	0	3prime_fragment	FALSE	canonical	3	1573	junction_5	159.470373424031	163	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	7790	False	NA	NA	False	NA	NA	NA	89905404	89902759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044
tx.794	chr10	-	507	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	75	2	2	-1	multi-exon	FALSE	canonical	3	2594	junction_5	774.773670177298	941	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTGTTTGCTGGTAT	NA	False	NA	NA	False	NA	NA	NA	23663098	23661082	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
tx.7940	chr3	-	1115	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	17	7	0	0	multi-exon	FALSE	canonical	3	1573	junction_5	145.593040126695	1203	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	7207	False	NA	NA	False	NA	NA	NA	89905987	89902759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
tx.7941	chr3	+	1614	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	2	894	2	2	multi-exon	FALSE	canonical	3	422	junction_3	33.2549077413979	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTTCTTTAGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	89960122	89969754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
tx.7942	chr3	+	2120	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	108	2	-6	-2	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	825	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGGCTTGACTTTGT	NA	False	NA	NA	False	NA	NA	NA	89986954	90008206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
tx.7943	chr3	-	362	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	3	-20	0	16	multi-exon	TRUE	canonical	3	13930	junction_3	2970.01597451746	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTAGCAAGTGGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	90120955	90119957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
tx.7944	chr3	-	654	3	FSM	ENSMUSG00000090733.7	ENSMUST00000199031.5	640	3	-14	0	0	0	multi-exon	FALSE	canonical	3	15374	junction_1	2726.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	NA	False	NA	NA	NA	90120955	90119973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90120061_90120240_90120352_90120499
tx.7945	chr3	-	526	3	NIC	ENSMUSG00000090733.7	novel	329	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	13930	junction_2	3448.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	NA	False	NA	NA	NA	90120955	90119973	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_90120352_90120499_90120609_90120916
tx.7946	chr3	-	572	4	FSM	ENSMUSG00000090733.7	ENSMUST00000200305.2	546	4	-25	-1	0	1	multi-exon	FALSE	canonical	3	63	junction_3	8789.54951443285	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTTGTCTTGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	90120955	90119976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120687
tx.7947	chr3	+	1137	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	-28	-2	-28	2	multi-exon	FALSE	canonical	3	20	junction_1	3.88613443106727	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCATTTGCATTACTTT	NA	False	NA	NA	False	NA	NA	NA	90128065	90133278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
tx.7948	chr3	+	1096	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	5	0	5	0	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	NA	False	NA	NA	NA	90138908	90143145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
tx.7949	chr3	+	1290	4	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	314	junction_3	19.2527054375915	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	NA	False	NA	NA	NA	90138910	90143145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_90139348_90139501_90139819_90141229_90141310_90142689
tx.795	chr10	+	2787	14	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.4205700752365	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	NA	False	NA	NA	NA	23672883	23703865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681044_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
tx.7950	chr3	-	1394	10	FSM	ENSMUSG00000027938.12	ENSMUST00000107369.2	1404	10	6	4	6	-4	multi-exon	TRUE	canonical	2	4	junction_7	1.89215404065849	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCCCAAGTTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	90150444	90144880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90145229_90145356_90145454_90145618_90145704_90145789_90145859_90145951_90146059_90146190_90146287_90149238_90149361_90149517_90149753_90150028_90150144_90150324
tx.7951	chr3	+	2335	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	29	0	29	0	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGGTATCTGATTCT	NA	False	NA	NA	False	NA	NA	NA	90155507	90160919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
tx.7952	chr3	-	1580	10	FSM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	686	-7	-260	7	multi-exon	FALSE	canonical	3	73	junction_6	21.4101625806157	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCGAGAGTCTGTGGG	NA	False	NA	NA	False	NA	NA	NA	90296548	90292538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
tx.7953	chr3	-	859	6	ISM	ENSMUSG00000027932.15	ENSMUST00000132041.2	2016	10	2365	-2	1682	0	3prime_fragment	FALSE	canonical	3	101	junction_5	14.0513344562002	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATCTTCGAGAGT	NA	False	NA	NA	False	NA	NA	NA	90294606	90292545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561
tx.7954	chr3	-	1828	9	ISM	ENSMUSG00000027932.15	ENSMUST00000132041.2	2016	10	440	-2	-243	0	intron_retention	FALSE	canonical	3	73	junction_6	21.5895663458069	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATCTTCGAGAGT	NA	False	NA	NA	False	NA	NA	NA	90296531	90292545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996
tx.7955	chr3	-	742	2	FSM	ENSMUSG00000027931.13	ENSMUST00000152510.2	949	2	326	-119	326	0	multi-exon	FALSE	canonical	3	173	junction_1	0	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	90358762	90357897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90358490_90358612
tx.7956	chr3	-	964	3	ISM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	10769	0	2379	0	intron_retention	FALSE	canonical	3	97	junction_2	38	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	90362404	90357897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_90358490_90358612_90358705_90362124
tx.7957	chr3	+	1519	3	NNC	ENSMUSG00000087411.2	novel	663	4	NA	NA	-624	711	intron_retention	FALSE	canonical	3	4	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGATGGTGTGATAATC	266	False	NA	NA	False	NA	NA	NA	90358265	90365113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_90358727_90362372_90362550_90364232
tx.7958	chr3	+	2014	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	13	0	3	0	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	480	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTACAAGCATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	90383466	90395686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
tx.7959	chr3	+	1930	13	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	856	0	846	0	3prime_fragment	FALSE	canonical	3	1252	junction_7	68.5425151923161	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTACAAGCATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	90384309	90395686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
tx.796	chr10	+	2836	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	0	1	0	-1	multi-exon	FALSE	canonical	3	72	junction_6	14.8148334428987	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	NA	False	NA	NA	NA	23672883	23703865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
tx.7960	chr3	-	1583	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	16	329	7	7	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATTATGGTTTCA	NA	False	NA	NA	False	NA	NA	NA	90398324	90395669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
tx.7961	chr3	-	1215	2	ISM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	7273	0	6844	0	3prime_fragment	FALSE	canonical	3	1281	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90409485	90406262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_90407415_90409422
tx.7962	chr3	-	1995	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	677	junction_3	303.893007487833	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90416782	90406262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
tx.7963	chr3	-	1998	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	23	-9	-1	0	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	219	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90416782	90406262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
tx.7964	chr3	-	1861	5	FSM	ENSMUSG00000001017.16	ENSMUST00000076639.11	1842	5	-17	-2	-3	0	multi-exon	FALSE	canonical	3	97	junction_1	581.611769138143	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	90416786	90406262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90407415_90410402_90410587_90413414_90413569_90414851_90414934_90416497
tx.7965	chr3	-	613	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	65	-1	-49	1	multi-exon	FALSE	canonical	3	340	junction_1	21.5	174	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTGTACCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	90421634	90418339	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_90418672_90419302_90419457_90421507
tx.7966	chr3	+	451	3	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	556	0	556	0	3prime_fragment	FALSE	canonical	3	229	junction_1	83.5	391	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	90422297	90431888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_90422327_90423156_90423350_90431659
tx.7967	chr3	+	338	3	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	556	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	185	28	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	90422297	90431888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_90422327_90423269_90423350_90431659
tx.7968	chr3	+	696	2	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	1141	0	1141	0	3prime_fragment	FALSE	canonical	3	396	junction_1	0	25	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	90422882	90431888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_90423350_90431659
tx.7969	chr3	+	1173	4	FSM	ENSMUSG00000042306.12	ENSMUST00000167598.6	1059	4	-114	0	-100	0	multi-exon	FALSE	canonical	2	2	junction_1	0.816496580927726	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTCTTGACTCTTTA	257	False	NA	NA	False	NA	NA	NA	90434062	90436144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_90434207_90434478_90434601_90435020_90435168_90435384
tx.797	chr10	+	2186	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	-12	1261	-2	0	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCCCAAGAACTCT	NA	False	NA	NA	False	NA	NA	NA	24025212	24064859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
tx.7970	chr3	+	1072	3	FSM	ENSMUSG00000074457.11	ENSMUST00000098911.10	1127	3	58	-3	-3	0	multi-exon	FALSE	canonical	3	11	junction_1	6	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTGCTTCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	90444618	90450458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_90444725_90449300_90449480_90449671
tx.7971	chr3	+	432	3	FSM	ENSMUSG00000001025.9	ENSMUST00000001051.9	731	3	300	-1	28	1	multi-exon	FALSE	canonical	3	31	junction_2	1	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	5497	False	NA	NA	False	NA	NA	NA	90520488	90521722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_90520534_90521049_90521212_90521497
tx.7972	chr3	+	503	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	9	-1	9	1	multi-exon	FALSE	canonical	3	443	junction_1	9.5	387	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAGAGTCAGTAGATTT	NA	False	NA	NA	False	NA	NA	NA	93427803	93433595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_93427861_93431357_93431507_93433298
tx.7973	chr3	+	650	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	37	-2	37	2	multi-exon	TRUE	canonical	3	427	junction_2	41.5	227	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACGTAGAGTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	93462423	93471952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_93462519_93468250_93468403_93471549
tx.7974	chr3	+	1726	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	55	0	8	0	multi-exon	FALSE	canonical	3	18	junction_4	4.47213595499958	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTTCTTGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	94217450	94239847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
tx.7975	chr3	+	1272	6	NNC	ENSMUSG00000041912.13	novel	1231	6	NA	NA	-47	-10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	16.4024388430501	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACACATATTTTATGT	NA	False	NA	NA	False	NA	NA	NA	94320532	94333685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_94320630_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
tx.7976	chr3	+	1262	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	-41	10	3	-10	multi-exon	FALSE	canonical	2	27	junction_5	8.74070935336486	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACACATATTTTATGT	NA	False	NA	NA	False	NA	NA	NA	94320582	94333685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
tx.7977	chr3	+	1623	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	2	-13	2	13	multi-exon	FALSE	canonical	3	188	junction_4	26.1002341411379	349	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCTGTGTTATTTCTT	8492	False	NA	NA	False	NA	NA	NA	94350633	94356028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
tx.7978	chr3	-	456	5	ISM	ENSMUSG00000028139.6	ENSMUST00000029785.4	630	7	677	1	8	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0.433012701892219	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTATTTTCACTTG	7937	False	NA	NA	False	NA	NA	NA	94380221	94372290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_94372403_94373063_94373191_94374191_94374239_94379469_94379547_94380128
tx.7979	chr3	-	1741	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-13	1803	-13	11	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATGTCCCAAAGTCCT	NA	False	NA	NA	False	NA	NA	NA	94489869	94408422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
tx.798	chr10	+	1774	6	ISM	ENSMUSG00000019998.7	ENSMUST00000020174.7	2502	10	30613	0	27483	0	3prime_fragment	FALSE	canonical	3	188	junction_2	18.1394597493972	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCCCAAGAACTCT	6438	False	NA	NA	False	NA	NA	NA	24055827	24064859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
tx.7980	chr3	-	6104	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	154	3	-13	-3	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTTTGGTTTCCTAGA	NA	False	NA	NA	False	NA	NA	NA	94489869	94404853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
tx.7981	chr3	-	2537	12	FSM	ENSMUSG00000005968.15	ENSMUST00000196733.5	2555	12	20	-2	19	0	multi-exon	FALSE	canonical	3	51	junction_9	16.8728840118112	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	6460	False	NA	NA	False	NA	NA	NA	94566159	94520063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
tx.7982	chr3	-	2606	13	FSM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	23	2	23	0	multi-exon	FALSE	canonical	3	34	junction_11	22.9474036294596	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCCCGTGGGTCTTT	6464	False	NA	NA	False	NA	NA	NA	94566155	94520065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
tx.7983	chr3	-	925	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	27	231	27	-2	multi-exon	FALSE	canonical	3	1538	junction_1	134.402380931292	1801	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGAGTTGGATTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	94794245	94791634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
tx.7984	chr3	+	1720	12	FSM	ENSMUSG00000068874.14	ENSMUST00000090839.12	1712	12	-8	0	-8	0	multi-exon	FALSE	canonical	3	16	junction_2	7.58314791042644	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATCACTCTGTGACG	2646	False	NA	NA	False	NA	NA	NA	94840358	94852069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_94840474_94844007_94844065_94844205_94844319_94844518_94844705_94845265_94845387_94846956_94847140_94847358_94847538_94849774_94849854_94849935_94850058_94851149_94851243_94851385_94851505_94851716
tx.7985	chr3	-	1280	10	FSM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	45	7	-17	3	multi-exon	FALSE	canonical	3	1001	junction_3	333.422654699207	1790	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGCTTCAAATAGTGAT	NA	False	NA	NA	False	NA	NA	NA	94949880	94940011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
tx.7986	chr3	-	853	2	NNC	ENSMUSG00000028126.17	novel	724	2	NA	NA	-5	11	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGTTGGTCCTCTCCTT	1248	False	NA	NA	False	NA	NA	NA	95014191	95004342	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_95004691_95013686
tx.7987	chr3	-	776	2	FSM	ENSMUSG00000028126.17	ENSMUST00000107229.2	724	2	-52	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCTTGTAGAGGAGTTG	1253	False	NA	NA	False	NA	NA	NA	95014186	95004353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95004630_95013686
tx.7988	chr3	+	1319	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	20	117	0	-117	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	389	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGATGTGTAAGGT	2580	False	NA	NA	False	NA	NA	NA	95018352	95030245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
tx.7989	chr3	+	2316	3	FSM	ENSMUSG00000053769.6	ENSMUST00000066386.6	2394	3	82	-4	82	4	multi-exon	FALSE	canonical	1	7	junction_2	5.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTAGTGGTTTTATTTC	8693	False	NA	NA	False	NA	NA	NA	95041480	95046833	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95042308_95044935_95045298_95045706
tx.799	chr10	+	1641	5	ISM	ENSMUSG00000019998.7	ENSMUST00000020174.7	2502	10	31545	0	28415	0	3prime_fragment	FALSE	canonical	3	188	junction_1	19.0180834996589	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCCCAAGAACTCT	7370	False	NA	NA	False	NA	NA	NA	24056759	24064859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
tx.7990	chr3	-	1924	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	62	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGGCTTAGTTTTTTC	6379	False	NA	NA	False	NA	NA	NA	95135989	95126445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95127775_95135394
tx.7991	chr3	+	2764	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	45	-4	-33	4	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	1919	False	NA	NA	False	NA	NA	NA	95136087	95143724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
tx.7992	chr3	-	764	3	FSM	ENSMUSG00000068860.6	ENSMUST00000107197.2	1289	3	527	-2	527	2	multi-exon	FALSE	canonical	3	16	junction_2	7.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCATTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	95148382	95144415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95144541_95147260_95147423_95147905
tx.7993	chr3	-	1250	2	FSM	ENSMUSG00000068860.6	ENSMUST00000090815.6	1959	2	524	185	524	2	multi-exon	FALSE	canonical	3	31	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCATTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	95148385	95144415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95144541_95147260
tx.7994	chr3	-	2849	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	291	0	291	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4641	False	NA	NA	False	NA	NA	NA	95189096	95160984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
tx.7995	chr3	+	2673	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	154	0	-117	0	multi-exon	TRUE	canonical	3	130	junction_1	26.9118359384908	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	95190408	95203477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
tx.7996	chr3	+	882	3	ISM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	11840	-10	2798	10	3prime_fragment	FALSE	canonical	3	134	junction_1	40.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGAGCAGGGGAGTA	NA	False	NA	NA	False	NA	NA	NA	95202094	95203487	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_95202298_95202583_95202737_95202961
tx.7997	chr3	-	559	2	FSM	ENSMUSG00000093424.4	ENSMUST00000176569.3	555	2	-4	0	-4	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTACATTGTTG	9731	False	NA	NA	False	NA	NA	NA	95222442	95218688	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95218919_95222113
tx.7998	chr3	+	2036	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	153	27	-10	-27	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTGTCAGACTATTAA	4471	False	NA	NA	False	NA	NA	NA	95222547	95230883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
tx.7999	chr3	-	1984	8	ISM	ENSMUSG00000015697.15	ENSMUST00000124638.8	5652	21	28545	0	28479	0	3prime_fragment	FALSE	canonical	3	215	junction_2	13.7573727914326	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	5249	False	NA	NA	False	NA	NA	NA	95235921	95230835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858
tx.8	chr1	+	4206	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	140	886	-44	83	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	7159283	7242966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
tx.80	chr1	+	438	3	FSM	ENSMUSG00000050122.20	ENSMUST00000195450.2	462	3	24	0	24	0	multi-exon	FALSE	canonical	3	35	junction_1	16	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGATTTCTCCCTCA	NA	False	NA	NA	False	NA	NA	NA	37174612	37180417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_37174647_37176810_37176969_37180171
tx.800	chr10	+	2338	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	60	0	60	0	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTTGGCTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	24471399	24474576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
tx.8000	chr3	+	1164	3	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-361	4	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	55	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTCTTCCTCTATTA	NA	False	NA	NA	False	NA	NA	NA	95334620	95338402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_95334711_95335864_95336134_95337597
tx.8001	chr3	+	898	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-340	4	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	52.0917993119412	9	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTCTTCCTCTATTA	NA	False	NA	NA	False	NA	NA	NA	95334641	95338402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_95334711_95335864_95336134_95337597_95337750_95337994
tx.8002	chr3	+	996	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-142	4	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	55.6437078403499	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTCTTCCTCTATTA	NA	False	NA	NA	False	NA	NA	NA	95334839	95338402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_95335007_95335864_95336134_95337597_95337750_95337994
tx.8003	chr3	+	2729	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	16	-46	0	42	multi-exon	TRUE	canonical	0	0	junction_11	68.4937059524599	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTTATTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	95341714	95402924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
tx.8004	chr3	+	1670	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	-18	-267	-17	188	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATAGTGTGTTATTAACA	NA	False	NA	NA	False	NA	NA	NA	95466970	95495170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
tx.8005	chr3	+	2822	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	14	0	14	0	multi-exon	FALSE	canonical	3	50	junction_3	6.87386354243376	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTCTCTCTGTACAT	NA	False	NA	NA	False	NA	NA	NA	95496258	95526553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
tx.8006	chr3	+	2276	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-40	1609	-13	-1609	multi-exon	FALSE	canonical	3	422	junction_2	58	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATCTCCGATCTTCTCG	369	False	NA	NA	False	NA	NA	NA	95532290	95537804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95532488_95534059_95534186_95535851
tx.8007	chr3	+	1163	4	FSM	ENSMUSG00000038619.13	ENSMUST00000058230.13	1130	4	-18	-15	0	15	multi-exon	FALSE	canonical	3	58	junction_3	204.491781959298	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTTGTGAAGCAGTTG	382	False	NA	NA	False	NA	NA	NA	95532303	95539428	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95532488_95534059_95534186_95535851_95536019_95538742
tx.8008	chr3	+	3425	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-8	1	-8	-1	multi-exon	FALSE	canonical	3	754	junction_2	15.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTAAGGTGTGGTATGG	6409	False	NA	NA	False	NA	NA	NA	95566090	95570486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95566799_95567071_95567320_95568017
tx.8009	chr3	+	2825	2	ISM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	865	1	796	-1	3prime_fragment	FALSE	canonical	3	754	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTAAGGTGTGGTATGG	7282	False	NA	NA	False	NA	NA	NA	95566963	95570486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_95567320_95568017
tx.801	chr10	-	1964	6	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	21057	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	50.2736511504784	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	25150941	25044987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25150849
tx.8010	chr3	-	1178	4	ISM	ENSMUSG00000015850.12	ENSMUST00000015994.4	3856	18	9968	-3	-740	0	3prime_fragment	FALSE	canonical	3	19	junction_3	2.44948974278318	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCTTCGTTATGTTCA	NA	False	NA	NA	False	NA	NA	NA	95585201	95583510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117
tx.8011	chr3	-	535	3	ISM	ENSMUSG00000028107.15	ENSMUST00000199869.5	3614	12	8805	-2	-1	2	3prime_fragment	TRUE	canonical	3	554	junction_1	5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	9935	False	NA	NA	False	NA	NA	NA	95649459	95647285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_95647632_95648633_95648749_95649385
tx.8012	chr3	-	2409	18	FSM	ENSMUSG00000028107.15	ENSMUST00000029752.15	2400	18	-7	-2	5	2	multi-exon	TRUE	canonical	1	178	junction_5	104.738626737206	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	NA	False	NA	NA	NA	95662190	95647285	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
tx.8013	chr3	-	3373	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	-75	0	10	0	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAGTGTCATGAATTG	9935	False	NA	NA	False	NA	NA	NA	95726165	95679566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
tx.8014	chr3	-	550	4	ISM	ENSMUSG00000015748.14	ENSMUST00000160155.8	2548	13	15438	-3	-1328	3	3prime_fragment	FALSE	canonical	3	427	junction_1	21.0449254902195	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATATTTTTCATATGG	NA	False	NA	NA	False	NA	NA	NA	95741448	95737926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395
tx.8015	chr3	-	2425	16	FSM	ENSMUSG00000015748.14	ENSMUST00000015892.14	2933	16	17	491	17	3	multi-exon	FALSE	canonical	3	400	junction_5	22.8428447343048	86	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATATTTTTCATATGG	NA	False	NA	NA	False	NA	NA	NA	95763180	95737926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
tx.8016	chr3	-	461	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	15	12	15	8	multi-exon	FALSE	canonical	3	716	junction_2	92.5	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTGGACATACAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	95778816	95769957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95770245_95777805_95777928_95778764
tx.8017	chr3	-	1115	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	21	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	72.7268863626101	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95789365	95785811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788592_95789266
tx.8018	chr3	-	1798	5	FSM	ENSMUSG00000038550.11	ENSMUST00000159739.8	1939	5	144	-3	13	3	multi-exon	FALSE	canonical	3	167	junction_2	14.8723737177358	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95789373	95785811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492
tx.8019	chr3	-	1433	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	13	3	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	52.0292225580971	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95789373	95785811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266
tx.802	chr10	+	1509	4	ISM	ENSMUSG00000019978.17	ENSMUST00000219372.2	523	5	3897	-1096	584	0	3prime_fragment	FALSE	canonical	3	372	junction_3	13.8884444373331	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	4489	False	NA	NA	False	NA	NA	NA	25382075	25399417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_25382172_25383674_25383756_25388870_25388980_25398194
tx.8020	chr3	-	1425	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	-22	-5	-2	3	multi-exon	FALSE	canonical	3	105	junction_5	32.3604697122894	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95789565	95785811	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
tx.8021	chr3	+	1748	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	-123	-24	-37	24	multi-exon	FALSE	canonical	3	108	junction_6	85.2670641116617	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACTTGGCTTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	95801243	95804781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
tx.8022	chr3	+	2055	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-11	819	-11	24	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACTTGGCTTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	95801269	95804781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
tx.8023	chr3	+	1069	5	FSM	ENSMUSG00000015749.13	ENSMUST00000171368.8	878	5	-67	-124	12	1	multi-exon	FALSE	canonical	3	38	junction_1	694.522497835743	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTGTAGTTTGGTGCA	NA	False	NA	NA	False	NA	NA	NA	95836569	95852878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95836963_95844431_95844508_95845193_95845352_95851618_95851674_95852491
tx.8024	chr3	+	1392	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	-8	-3	-8	3	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTAGTTTGGTGCATT	NA	False	NA	NA	False	NA	NA	NA	95836581	95852880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
tx.8025	chr3	+	1420	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	32	1822	0	3	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	498	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTAGTTTGGTGCATT	NA	False	NA	NA	False	NA	NA	NA	95836589	95852880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
tx.8026	chr3	+	412	2	FSM	ENSMUSG00000015749.13	ENSMUST00000168471.2	502	2	135	-45	135	3	multi-exon	FALSE	canonical	3	1614	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTAGTTTGGTGCATT	NA	False	NA	NA	False	NA	NA	NA	95851650	95852880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_95851674_95852491
tx.8027	chr3	-	2027	15	FSM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	610	0	-26	0	multi-exon	TRUE	canonical	3	42	junction_11	13.9571136130707	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCAGTGTTTGATGG	NA	False	NA	NA	False	NA	NA	NA	95965168	95907143	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95907464_95926920_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
tx.8028	chr3	-	401	2	FSM	ENSMUSG00000015747.6	ENSMUST00000140518.2	266	2	-135	0	-24	0	multi-exon	FALSE	canonical	3	103	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATCATAATTATC	NA	False	NA	NA	False	NA	NA	NA	95965166	95964198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_95964427_95964993
tx.8029	chr3	+	1545	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	198	172	-17	-172	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	154	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGTGAAGTAACTTTT	NA	False	NA	NA	False	NA	NA	NA	96079845	96084708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
tx.8030	chr3	-	577	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	-57	209	-57	66	multi-exon	FALSE	canonical	3	441	junction_1	0	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTCCTTGATTTGTAC	NA	False	NA	NA	False	NA	NA	NA	96104959	96104112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_96104596_96104865
tx.8031	chr3	+	1381	2	ISM	ENSMUSG00000038403.11	ENSMUST00000049208.11	2028	4	2178	-1	2178	1	3prime_fragment	FALSE	canonical	1	2	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTCTGTTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	96434665	96436527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_96434899_96435379
tx.8032	chr3	-	727	2	ISM	ENSMUSG00000074398.6	ENSMUST00000098839.3	659	3	102	-3	102	3	3prime_fragment	FALSE	canonical	2	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTTTTAAACCTTG	NA	False	NA	NA	False	NA	NA	NA	96465029	96463077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_96463377_96464601
tx.8033	chr3	+	2803	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	3	21	0	4	multi-exon	FALSE	canonical	3	279	junction_1	78.2390371795021	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTCTTTTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	96465275	96469178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
tx.8034	chr3	+	2800	8	FSM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	0	-5	0	4	multi-exon	FALSE	canonical	3	228	junction_1	94.3746333956929	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTCTTTTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	96465275	96469178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
tx.8038	chr3	+	713	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	0	1891	0	0	multi-exon	FALSE	canonical	3	2213	junction_2	872.428931202995	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	-70	True	NA	NA	NA	96537255	96539216	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
tx.8039	chr3	+	710	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	7	1891	0	0	multi-exon	FALSE	canonical	3	2531	junction_2	745.762804114016	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	-70	True	NA	NA	NA	96537255	96539216	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
tx.8040	chr3	+	1595	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	192	637	-31	3	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTATTCAATTCAAGA	NA	False	NA	NA	False	NA	NA	NA	96542937	96552045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
tx.805	chr10	+	2266	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	66	1524	66	385	multi-exon	FALSE	canonical	3	81	junction_5	6.04648658313239	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATCTCACGACCTATG	NA	False	NA	NA	False	NA	NA	NA	29189561	29221941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
tx.8052	chr3	+	1670	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	31	53	31	3	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATGTTGAGATCAAAGG	NA	False	NA	NA	False	NA	NA	NA	97066123	97083837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
tx.8053	chr3	-	2969	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.3504732250088	19	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTATGTTGCTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	97517502	97468055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
tx.8054	chr3	-	2015	16	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	3	-1374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.5978274034128	8	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGTTCTAAAAGCATT	NA	False	NA	NA	False	NA	NA	NA	97517505	97479724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
tx.8055	chr3	+	1401	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	22	1387	-4	38	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTTTTTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	97808527	97829205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
tx.8056	chr3	-	1829	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	64	0	64	0	multi-exon	FALSE	canonical	3	1070	junction_1	240.376770374213	676	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	NA	False	NA	NA	NA	98247242	98220485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
tx.8057	chr3	+	2543	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	22	1845	-3	-845	multi-exon	FALSE	canonical	3	38	junction_2	3.66606055596467	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGTTGTACTGTGACTTA	NA	False	NA	NA	False	NA	NA	NA	99048405	99125674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
tx.8058	chr3	-	3432	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	NA	False	NA	NA	NA	100069723	100045495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
tx.8059	chr3	-	3373	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	NA	False	NA	NA	NA	100069719	100045495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
tx.806	chr10	-	2197	4	FSM	ENSMUSG00000038876.13	ENSMUST00000214896.2	781	4	0	-1416	0	208	multi-exon	FALSE	canonical	3	10	junction_3	95.3601360923712	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAGGTCGTGAGATTTA	NA	False	NA	NA	False	NA	NA	NA	29238043	29221963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237979
tx.8060	chr3	+	2593	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	87	328	-50	-2	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGTCTTCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	100069783	100113969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
tx.8062	chr3	-	979	2	ISM	ENSMUSG00000008763.17	ENSMUST00000123442.2	508	3	-158	141	-7	-141	intron_retention	FALSE	canonical	3	133	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAGTCAAGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	100592782	100563517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_100563591_100591876
tx.8063	chr3	+	2349	6	FSM	ENSMUSG00000033233.18	ENSMUST00000037409.13	4612	6	-44	2307	-44	2	multi-exon	FALSE	canonical	2	8	junction_3	2.33238075793812	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGACTTCAAGTGCTTT	4287	False	NA	NA	False	NA	NA	NA	100829746	100839020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_100830716_100832256_100832991_100834540_100834671_100835370_100835486_100837132_100837260_100838746
tx.8066	chr3	-	683	4	ISM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	25037	4	-2087	-4	3prime_fragment	FALSE	canonical	3	413	junction_2	31.6684210040363	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	101486963	101483538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836
tx.8068	chr3	-	3619	23	FSM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	56	4	56	-4	multi-exon	FALSE	canonical	3	297	junction_17	44.2662166204014	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	101511944	101483538	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
tx.807	chr10	-	2005	4	FSM	ENSMUSG00000038876.13	ENSMUST00000161508.3	945	4	-12	-1048	9	5	multi-exon	FALSE	canonical	3	17	junction_3	93.3821301011185	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTTTGAGTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	29238034	29222166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237959
tx.8070	chr3	-	2337	4	ISM	ENSMUSG00000027860.16	ENSMUST00000161021.2	818	5	992	-1485	2	22	3prime_fragment	FALSE	canonical	3	141	junction_3	77.2801541291309	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATGGAATATTTGTGA	NA	False	NA	NA	False	NA	NA	NA	102073254	102064010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088
tx.8071	chr3	-	2339	5	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-720	22	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	103.228811385194	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATGGAATATTTGTGA	NA	False	NA	NA	False	NA	NA	NA	102075009	102064010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102074975
tx.8072	chr3	-	3012	4	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	37009	3118	-711	16	3prime_fragment	FALSE	canonical	3	166	junction_1	66.1379030679248	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAATTGGCATGGAATAT	NA	False	NA	NA	False	NA	NA	NA	102075000	102064016	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153
tx.8073	chr3	-	1764	4	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-744	1091	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	119.08633656115	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGATCTGTTTACCAACT	NA	False	NA	NA	False	NA	NA	NA	102075033	102069410	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102074975
tx.8074	chr3	-	1506	3	FSM	ENSMUSG00000027860.16	ENSMUST00000160226.8	617	3	-713	-176	-713	176	multi-exon	FALSE	canonical	3	188	junction_2	64	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGCCGTCTCTCTGGC	NA	False	NA	NA	False	NA	NA	NA	102075002	102070325	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_102070850_102072670_102072804_102074153
tx.8075	chr3	-	687	3	FSM	ENSMUSG00000027860.16	ENSMUST00000162361.2	472	3	-30	-185	-30	8	multi-exon	FALSE	canonical	3	141	junction_2	87.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTTGTGTGTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	102073286	102070493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_102070850_102072670_102072804_102073088
tx.8076	chr3	+	3007	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	417	1060	-11	-1060	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTTGAGTTATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	102642261	102678548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
tx.8078	chr3	+	2365	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	32	4978	10	1287	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCTCATTTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	102903055	102910797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
tx.8079	chr3	+	527	3	ISM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	26	11030	4	78	5prime_fragment	FALSE	canonical	3	384	junction_2	20	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGGTCGTTCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	102903049	102904745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_102903284_102903471_102903578_102904558
tx.808	chr10	-	1953	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	0	-5	0	5	multi-exon	FALSE	canonical	3	93	junction_2	66.5	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTTTGAGTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	29238043	29222166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_29223880_29230287_29230444_29237959
tx.8080	chr3	+	3662	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	3	184	-2	3	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102927925	102965123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
tx.8081	chr3	+	3758	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	181	379	0	3	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102927922	102965123	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
tx.8083	chr3	+	1312	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	47	3111	-16	404	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCTGTAGGCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	102965647	102972119	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
tx.8084	chr3	+	4928	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	103010010	103077054	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
tx.8085	chr3	-	419	2	Antisense	novelGene_ENSMUSG00000007379.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGTGAAAATCTACCT	NA	False	NA	NA	False	NA	NA	NA	103029403	103026112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr3_-_103026360_103029231
tx.8086	chr3	+	1064	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	81	322	-13	3	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	268	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	5010	False	NA	NA	False	NA	NA	NA	103079051	103086146	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
tx.8087	chr3	-	2153	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	48	2144	-7	136	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTTCCACTTGGT	NA	False	NA	NA	False	NA	NA	NA	103716712	103710064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
tx.8088	chr3	+	2879	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	-80	0	28	0	multi-exon	FALSE	canonical	3	54	junction_7	8.73053390247253	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCTGTCGTCACTT	NA	False	NA	NA	False	NA	NA	NA	103716863	103729341	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
tx.8089	chr3	+	1600	9	ISM	ENSMUSG00000058388.15	ENSMUST00000090685.11	3006	18	25356	3	-2618	-1	3prime_fragment	FALSE	canonical	3	60	junction_3	15.2924613780778	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCAGTTTCTAGGCTT	NA	False	NA	NA	False	NA	NA	NA	103901117	103914803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
tx.809	chr10	-	1948	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	380	1995	-15	5	multi-exon	FALSE	canonical	3	77	junction_2	74.5	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTTTGAGTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	29238058	29222166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_29223880_29230287_29230444_29237979
tx.8090	chr3	+	3251	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	-29	1204	-29	-1204	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTCCGCATGTTTAT	NA	False	NA	NA	False	NA	NA	NA	104545954	104564574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
tx.8091	chr3	+	1718	10	FSM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	3	0	3	0	multi-exon	FALSE	canonical	3	56	junction_1	13.4200881305638	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	NA	NA	NA	104688374	104693334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
tx.8092	chr3	+	1571	10	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	1266	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	25.0796262795319	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	NA	NA	NA	104689637	104693334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_104689842_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
tx.8093	chr3	+	1066	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	136	0	-10	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	96	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	104696339	104701775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
tx.8094	chr3	-	704	4	ISM	ENSMUSG00000002227.16	ENSMUST00000002297.12	3498	20	22299	-4	21411	4	3prime_fragment	FALSE	canonical	3	1316	junction_2	22.0957512255687	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	104703259	104702147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175
tx.8095	chr3	-	3543	20	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	22	-4	18	4	intron_retention	TRUE	canonical	3	1102	junction_11	86.7727314610285	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	104725599	104702147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
tx.8096	chr3	-	2973	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	66	154	-39	-154	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	9239	False	NA	NA	False	NA	NA	NA	104771755	104730248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
tx.8097	chr3	+	1947	14	FSM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	578	3203	1	1	multi-exon	FALSE	canonical	3	59	junction_11	6.94526359402813	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTAGTGTATTTTCTTTG	658	False	NA	NA	False	NA	NA	NA	104772396	104834177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
tx.8099	chr3	-	2777	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	123	5	1	-5	multi-exon	FALSE	canonical	3	276	junction_2	22.5302019520465	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTCAGTTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	105594767	105585590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
tx.81	chr1	-	3804	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	55	4	-48	-4	multi-exon	FALSE	canonical	3	395	junction_2	27.5	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTTCTGTTTCAAG	6327	False	NA	NA	False	NA	NA	NA	37469129	37456168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_37459709_37467422_37467507_37468949
tx.810	chr10	-	444	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	7	1081	7	-1081	multi-exon	FALSE	canonical	3	2101	junction_1	71	631	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTGAGTTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	30076549	30073085	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_30073223_30074461_30074576_30076356
tx.8101	chr3	-	1400	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-8	1015	-8	32	multi-exon	TRUE	canonical	3	409	junction_7	23.7667234354495	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGTGTCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	105708660	105635597	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
tx.8102	chr3	-	1136	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	835	0	0	0	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	951	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAGTTTCATACTCTG	NA	False	NA	NA	False	NA	NA	NA	105866580	105850013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
tx.8103	chr3	+	603	4	ISM	ENSMUSG00000000561.15	ENSMUST00000127464.8	1095	8	-39	4033	-39	-3492	5prime_fragment	FALSE	canonical	3	940	junction_3	26.1576417557513	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGGTAAGTGTTGAGTCC	NA	False	NA	NA	False	NA	NA	NA	105866784	105869375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330
tx.8104	chr3	+	979	9	ISM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	107	3333	-32	335	5prime_fragment	FALSE	canonical	3	910	junction_4	52.6165373243052	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAAGTAGAATCCTG	NA	False	NA	NA	False	NA	NA	NA	105866791	105873743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672
tx.8105	chr3	+	1124	8	FSM	ENSMUSG00000000561.15	ENSMUST00000127464.8	1095	8	-26	-3	-26	3	multi-exon	FALSE	canonical	3	910	junction_4	52.8737425671876	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGAGTCTGAGTAACT	NA	False	NA	NA	False	NA	NA	NA	105866797	105873411	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080
tx.8106	chr3	+	2004	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	113	1565	-26	668	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCAGAGCTGTTACTTA	NA	False	NA	NA	False	NA	NA	NA	105866797	105875511	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
tx.8107	chr3	-	2051	9	FSM	ENSMUSG00000040774.16	ENSMUST00000068301.11	2814	9	43	720	-16	3	multi-exon	FALSE	canonical	3	190	junction_8	25.7924407530579	112	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTTCTCAATTTTATT	NA	False	NA	NA	False	NA	NA	NA	106455075	106410295	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446920_106454995
tx.8109	chr3	+	1550	7	NIC	ENSMUSG00000027900.16	novel	2035	8	NA	NA	12	-394	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	48.2266063035287	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTGATGACATTGTTCA	NA	False	NA	NA	False	NA	NA	NA	106455125	106481767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_106455237_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
tx.811	chr10	-	2171	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	-25	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	51.2211216763663	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGCCTATTTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	30476716	30410222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
tx.8110	chr3	+	1812	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	33	1426	0	-381	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCAGTAGTGTAAATTA	NA	False	NA	NA	False	NA	NA	NA	106455146	106481780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
tx.8112	chr3	+	1624	3	FSM	ENSMUSG00000056260.16	ENSMUST00000098751.10	929	3	-22	-673	-22	0	multi-exon	FALSE	canonical	3	7	junction_1	16.5	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	106592280	106643893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_106592450_106641673_106641956_106642720
tx.8113	chr3	+	3160	4	FSM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	-77	20	-34	-20	multi-exon	FALSE	canonical	2	11	junction_1	11.8415464455544	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGATATTTTTCAATGTG	NA	False	NA	NA	False	NA	NA	NA	106629174	106643870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_106629423_106638978_106640459_106641673_106641956_106642720
tx.8114	chr3	+	1655	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	14	0	-1	0	multi-exon	FALSE	canonical	3	21	junction_1	9.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	106629222	106643893	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_106629423_106641673_106641956_106642720
tx.8115	chr3	+	737	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	6	0	6	0	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	431	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3157	False	NA	NA	False	NA	NA	NA	107186320	107191398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
tx.8116	chr3	-	3208	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	7	0	7	0	multi-exon	FALSE	canonical	3	175	junction_2	23.6893963620857	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	107539003	107519847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
tx.8117	chr3	-	3654	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	209	0	154	0	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTAGTCGTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	107603667	107570435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
tx.8118	chr3	-	2643	9	ISM	ENSMUSG00000027893.15	ENSMUST00000144864.8	1689	10	655	-1361	-410	-2	3prime_fragment	FALSE	canonical	3	702	junction_5	32.961862432211	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAGTAGTCGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	107577235	107570437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207
tx.8119	chr3	+	912	8	FSM	ENSMUSG00000004032.11	ENSMUST00000004134.11	945	8	33	0	8	0	multi-exon	FALSE	canonical	3	47	junction_1	3.52252228741084	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTCTAGATGGATTTC	NA	False	NA	NA	False	NA	NA	NA	107803169	107806002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_107803315_107803613_107803690_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
tx.812	chr10	-	651	2	ISM	ENSMUSG00000019792.9	ENSMUST00000215595.2	1576	11	52918	0	42332	0	3prime_fragment	FALSE	canonical	3	180	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	NA	False	NA	NA	NA	30423773	30410710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_30411241_30423652
tx.8120	chr3	-	1227	8	FSM	ENSMUSG00000004035.13	ENSMUST00000004137.11	1377	8	150	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	2.49897938350513	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTTTGGTCGG	NA	False	NA	NA	False	NA	NA	NA	107838983	107833649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107834297_107836185_107836297_107836378_107836475_107837589_107837691_107837788_107837871_107838143_107838209_107838630_107838707_107838934
tx.8121	chr3	-	1138	8	FSM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	15	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	8.51649060616507	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	1805	False	NA	NA	False	NA	NA	NA	107851050	107846162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850913
tx.8122	chr3	-	1196	8	FSM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	113	2	113	-2	multi-exon	FALSE	canonical	3	154	junction_5	50.6947648547014	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTCTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	107876486	107871013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
tx.8123	chr3	-	1065	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	626	junction_6	40.3692143766479	141	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2041	False	NA	NA	False	NA	NA	NA	107893770	107889017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
tx.8124	chr3	-	1163	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	124	2	-43	-2	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGAGTTGTGTCTTTTT	6707	False	NA	NA	False	NA	NA	NA	107925165	107919572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
tx.8125	chr3	-	1466	8	NNC	ENSMUSG00000027890.18	novel	1462	8	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.6533130612605	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTTTCCTACCATTG	NA	False	NA	NA	False	NA	NA	NA	107952187	107947718	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107952160
tx.8126	chr3	-	1491	8	NNC	ENSMUSG00000027890.18	novel	777	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.5819659389298	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	107952182	107947723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107952125
tx.8127	chr3	-	1678	8	FSM	ENSMUSG00000027890.18	ENSMUST00000029489.15	1707	8	29	0	1	0	multi-exon	FALSE	canonical	3	51	junction_7	25.3175747621437	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	107952181	107947723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107951952
tx.8128	chr3	-	1480	8	FSM	ENSMUSG00000027890.18	ENSMUST00000178808.8	1462	8	-16	-2	-9	0	multi-exon	FALSE	canonical	3	22	junction_7	32.937169624258	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	107952191	107947723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952160
tx.8129	chr3	-	1664	8	NNC	ENSMUSG00000027890.18	novel	1707	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.2329948866726	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	107952182	107947723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107951952
tx.813	chr10	-	1813	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	56	490	2	0	multi-exon	FALSE	canonical	3	159	junction_10	17.7080882335979	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	NA	False	NA	NA	NA	30476689	30410710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
tx.8130	chr3	-	3697	18	FSM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	-47	0	-23	0	multi-exon	TRUE	canonical	3	198	junction_12	21.7907634157735	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	107993990	107981377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
tx.8131	chr3	-	3245	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	17	0	17	0	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTTTTATTTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	108053445	108014595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
tx.8133	chr3	+	994	9	FSM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	245	0	245	0	multi-exon	FALSE	canonical	3	2544	junction_4	248.775972262194	1237	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGTCTGTGATC	NA	False	NA	NA	False	NA	NA	NA	108164486	108187290	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
tx.8134	chr3	+	1653	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	-28	62	-8	-10	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7024	False	NA	NA	False	NA	NA	NA	108291146	108295485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
tx.8135	chr3	+	1742	7	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-9	-10	intron_retention	FALSE	canonical	3	155	junction_1	118.602510747267	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7023	False	NA	NA	False	NA	NA	NA	108291145	108295485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_108291212_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
tx.8136	chr3	+	1771	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	-7	-10	intron_retention	FALSE	canonical	3	329	junction_1	60.1405760605009	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7025	False	NA	NA	False	NA	NA	NA	108291147	108295485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_108291243_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
tx.8137	chr3	+	1678	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	-2	10	-2	-10	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7030	False	NA	NA	False	NA	NA	NA	108291152	108295485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
tx.8138	chr3	-	1861	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	4	1705	4	42	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	1581	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGCTGGGTCTCCCT	NA	False	NA	NA	False	NA	NA	NA	108352510	108333885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
tx.8139	chr3	-	2804	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	65	-5	65	5	multi-exon	FALSE	canonical	3	163	junction_1	15	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTTGTCATGTGTG	5339	False	NA	NA	False	NA	NA	NA	108469717	108463735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_108466277_108467502_108467635_108469586
tx.814	chr10	-	623	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	34	218	34	-10	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	81	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAAGAACTGTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	30494441	30484354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
tx.8140	chr3	-	2755	3	FSM	ENSMUSG00000068732.6	ENSMUST00000106622.3	2752	3	0	-3	0	3	multi-exon	FALSE	canonical	1	2	junction_2	80.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGCTTTGTCATGTG	5570	False	NA	NA	False	NA	NA	NA	108469486	108463737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_108466277_108467502_108467635_108469402
tx.8141	chr3	+	1290	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	0	1153	0	0	multi-exon	FALSE	canonical	3	149	junction_1	10.4986771653491	284	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGAGTTTGTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	108479014	108489385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
tx.8142	chr3	+	2041	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	2	0	2	0	multi-exon	TRUE	canonical	3	66	junction_1	36.8117839559091	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6598	False	NA	NA	False	NA	NA	NA	108561230	108586156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
tx.8143	chr3	+	2095	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	23.1716555264122	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6615	False	NA	NA	False	NA	NA	NA	108561247	108586156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
tx.8144	chr3	-	2929	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	117	452	-76	-452	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTATCTGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	108629508	108586405	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
tx.8145	chr3	-	2460	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	-41	0	-26	0	multi-exon	FALSE	canonical	1	38	junction_10	22.0233461984726	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGAGTTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	108747868	108700491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
tx.8146	chr3	-	3038	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6838	False	NA	NA	False	NA	NA	NA	108819055	108810122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
tx.8147	chr3	-	1821	15	FSM	ENSMUSG00000027981.15	ENSMUST00000106536.8	1839	15	18	0	18	0	multi-exon	FALSE	canonical	3	86	junction_8	14.9497457489813	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	NA	False	NA	NA	NA	113423780	113399112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
tx.8148	chr3	-	583	2	FSM	ENSMUSG00000054426.12	ENSMUST00000185424.2	433	2	-145	-5	0	3	multi-exon	FALSE	canonical	3	36	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTATGGTGATT	941	False	NA	NA	False	NA	NA	NA	115681746	115675226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_115675488_115681424
tx.815	chr10	+	846	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	12	0	-10	0	multi-exon	FALSE	canonical	3	475	junction_4	15.6025638918737	127	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTCTTCTGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	31189390	31204200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
tx.8150	chr3	+	1263	8	NIC	ENSMUSG00000033554.18	novel	1558	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	95.8225400606427	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	7712	False	NA	NA	False	NA	NA	NA	115681785	115722737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_115681812_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
tx.8151	chr3	+	1346	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	-12	242	-2	2	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTATAATCTCCTT	7746	False	NA	NA	False	NA	NA	NA	115681819	115722739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
tx.8152	chr3	-	2019	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	27	6974	27	-6974	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTACTTTGTAGCCTA	135	False	NA	NA	False	NA	NA	NA	115801028	115739595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
tx.8153	chr3	+	2993	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	0	7	0	-7	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGAGCGGGTGCTCTGG	19	False	NA	NA	False	NA	NA	NA	115801110	115822659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
tx.8154	chr3	+	2787	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	105	-52	105	-5	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCGGGTGCTCTGGTG	157	False	NA	NA	False	NA	NA	NA	115801973	115822661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
tx.8155	chr3	-	1331	10	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	356	0	172	0	3prime_fragment	FALSE	canonical	3	261	junction_7	33.4398298772919	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCTGCTGCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	116301501	116282611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399
tx.8156	chr3	-	1496	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	98	0	23	0	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	214	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCTGCTGCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	116301759	116282611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
tx.8157	chr3	+	3258	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	43	0	-6	0	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	NA	False	NA	NA	NA	116306761	116343630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
tx.8158	chr3	+	3056	9	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	69.7387983836831	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	NA	False	NA	NA	NA	116306763	116343630	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_116306841_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
tx.8159	chr3	-	1862	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19709	-4	9	4	3prime_fragment	FALSE	canonical	3	87	junction_7	13.8524366087703	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTGAGGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	116388527	116374737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
tx.816	chr10	-	1210	7	NNC	ENSMUSG00000000296.9	novel	1308	7	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	231.746568954585	6	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATCTTTTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	31321844	31208368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_31208966_31214180_31214242_31217135_31217175_31222597_31222709_31233867_31234017_31255210_31255327_31321707
tx.8160	chr3	-	949	2	ISM	ENSMUSG00000033439.13	ENSMUST00000199439.2	865	3	550	-241	550	0	3prime_fragment	FALSE	canonical	3	136	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATCTGAGTGTGAGGC	NA	False	NA	NA	False	NA	NA	NA	116376575	116374743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_116375260_116376142
tx.8161	chr3	-	1637	11	FSM	ENSMUSG00000033439.13	ENSMUST00000184963.8	1616	11	-26	5	-2	-4	multi-exon	FALSE	canonical	3	22	junction_2	31.2251501197352	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATCAATCTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	116388511	116374747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
tx.8162	chr3	+	3369	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	-6	-1469	-6	1469	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCCGCATTGTTCA	NA	False	NA	NA	False	NA	NA	NA	116388624	116416720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
tx.8163	chr3	-	2720	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	62	0	-5	0	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	141	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	NA	False	NA	NA	NA	116456264	116424812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
tx.8164	chr3	-	1246	6	ISM	ENSMUSG00000027957.14	ENSMUST00000120120.8	1791	9	24829	0	-10974	0	3prime_fragment	FALSE	canonical	3	122	junction_1	26.1044057584156	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATCCAGGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	116481051	116466801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919
tx.8165	chr3	+	2293	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2122	66	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	51	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAATGGAGATTGTGTC	NA	False	NA	NA	False	NA	NA	NA	116655337	116697193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
tx.8166	chr3	-	584	2	ISM	ENSMUSG00000028007.14	ENSMUST00000198499.5	1314	8	45786	-298	30352	-4	3prime_fragment	FALSE	canonical	3	21	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTCTATGATGTGTTC	NA	False	NA	NA	False	NA	NA	NA	117594571	117575523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_117576026_117594489
tx.8167	chr3	-	1040	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	0	444	0	1	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATGTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	120965344	120949490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
tx.8168	chr3	+	608	2	ISM	ENSMUSG00000039887.12	ENSMUST00000198341.2	831	3	-157	21701	-40	-21237	5prime_fragment	FALSE	canonical	3	72	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGGAAATGATTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	121085381	121092609	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_121085633_121092252
tx.8169	chr3	+	986	3	FSM	ENSMUSG00000039887.12	ENSMUST00000198341.2	831	3	-151	-4	-34	4	multi-exon	FALSE	canonical	3	72	junction_1	4	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTGTATCATTC	NA	False	NA	NA	False	NA	NA	NA	121085387	121114314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_121085633_121092252_121092408_121113728
tx.817	chr10	-	1129	6	NNC	ENSMUSG00000000296.9	novel	969	8	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	237.372786982838	4	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGATCTTTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	31321826	31208370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_31208966_31217135_31217175_31222597_31222709_31233867_31234017_31255210_31255327_31321707
tx.8170	chr3	+	993	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	-30	1074	-30	313	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGTTCTCTTGGGAC	NA	False	NA	NA	False	NA	NA	NA	121085391	121155669	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
tx.8171	chr3	+	2036	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	5	8	5	0	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	2414	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	121220150	121251848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
tx.8172	chr3	-	2495	15	FSM	ENSMUSG00000039865.9	ENSMUST00000039197.9	2620	15	125	0	125	0	multi-exon	FALSE	canonical	2	7	junction_10	3.70672307009404	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTTGTTCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	121325928	121253176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_121253726_121254750_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
tx.8173	chr3	+	1900	6	FSM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	-27	-1	-27	1	multi-exon	FALSE	canonical	3	41	junction_2	13.6176356244394	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATTTATATCTTCCACTT	NA	False	NA	NA	False	NA	NA	NA	121517158	121528698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029_121526190_121527754
tx.8174	chr3	-	3383	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	106	0	1	0	multi-exon	FALSE	canonical	3	145	junction_14	20.5277981251709	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGCCTGACCTTTT	7237	False	NA	NA	False	NA	NA	NA	121608845	121552555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
tx.8175	chr3	+	1225	2	ISM	ENSMUSG00000039756.13	ENSMUST00000197215.2	911	3	-22	-129	8	129	intron_retention	FALSE	canonical	3	1330	junction_1	0	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCCCACGGGTGCAGGTA	NA	False	NA	NA	False	NA	NA	NA	122068044	122069988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_122068128_122068846
tx.8176	chr3	+	2421	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	8	0	8	0	multi-exon	FALSE	canonical	3	1082	junction_6	112.264073604258	596	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	NA	False	NA	NA	NA	122068044	122078920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
tx.8177	chr3	+	1222	6	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	1926	0	297	0	3prime_fragment	FALSE	canonical	3	1082	junction_5	120.346167367308	222	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	NA	False	NA	NA	NA	122069962	122078920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
tx.8178	chr3	+	529	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	183	448	183	-448	multi-exon	FALSE	canonical	3	1657	junction_1	0	609	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTATCTTT	NA	False	NA	NA	False	NA	NA	NA	122718034	122719385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_122718306_122719127
tx.8179	chr3	-	1939	8	FSM	ENSMUSG00000039701.12	ENSMUST00000199923.5	1984	8	49	-4	10	4	multi-exon	FALSE	canonical	3	36	junction_5	4.92391083988974	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGTTTCTTCAAATAT	NA	False	NA	NA	False	NA	NA	NA	122778110	122750813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
tx.818	chr10	-	1283	7	FSM	ENSMUSG00000000296.9	ENSMUST00000000305.7	1308	7	26	-1	26	1	multi-exon	FALSE	canonical	3	31	junction_2	224.403654159196	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGATCTTTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	31321928	31208370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
tx.8180	chr3	+	251	2	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	123058442	123059380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr3_+_123058555_123059241
tx.8181	chr3	-	2607	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	134	0	11	0	multi-exon	TRUE	canonical	3	213	junction_2	25.8534330408942	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTGTTTTCCTTAGA	NA	False	NA	NA	False	NA	NA	NA	123179623	123161945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
tx.8182	chr3	-	2400	10	NIC	ENSMUSG00000028114.17	novel	2741	11	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	76.5041756304118	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTGTTTTCCTTAGA	NA	False	NA	NA	False	NA	NA	NA	123179627	123161945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_-_123163340_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
tx.8183	chr3	-	1939	10	FSM	ENSMUSG00000028114.17	ENSMUST00000174323.6	4202	10	7	2256	7	-1081	multi-exon	FALSE	canonical	3	213	junction_1	26.0261027564896	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAATAACAGAATATATGA	NA	False	NA	NA	False	NA	NA	NA	123179627	123164201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
tx.8184	chr3	-	380	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	68	0	-3	0	multi-exon	FALSE	canonical	3	427	junction_1	15.5	1047	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCCTGTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	123301985	123301200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_123301310_123301465_123301512_123301760
tx.8185	chr3	-	1997	13	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	163	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	254.560732766597	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	NA	False	NA	NA	NA	127346683	127330362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346640
tx.8186	chr3	-	2092	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	29	0	27	0	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	428	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	NA	False	NA	NA	NA	127346969	127330362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
tx.8187	chr3	-	743	7	ISM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	83	9660	-69	97	5prime_fragment	FALSE	canonical	3	471	junction_1	145.282961454153	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGAATAAAGAAGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	127346915	127340022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
tx.8188	chr3	+	952	5	ISM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-159	3404	-15	-3404	5prime_fragment	FALSE	canonical	3	63	junction_3	5.7227615711298	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAATGGTATAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	127347122	127355083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544
tx.8189	chr3	+	3963	6	FSM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-159	0	-15	0	multi-exon	FALSE	canonical	3	40	junction_5	13.6	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTATGTATGTGCAT	NA	False	NA	NA	False	NA	NA	NA	127347122	127358487	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
tx.819	chr10	-	1158	6	FSM	ENSMUSG00000000296.9	ENSMUST00000213639.2	827	6	-52	-279	5	-1	multi-exon	FALSE	canonical	3	30	junction_2	219.239230066154	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGGCTGGATCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	31321845	31208373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_31208966_31214180_31214242_31222606_31222709_31233867_31234017_31255210_31255327_31321707
tx.8190	chr3	+	1418	2	NNC	ENSMUSG00000028023.17	novel	1942	5	NA	NA	3296	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	129011219	129013240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_129011380_129011982
tx.8191	chr3	+	2575	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	0	3376	0	148	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAAGACGCAATTACAT	NA	False	NA	NA	False	NA	NA	NA	129326034	129428768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
tx.8192	chr3	+	2506	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	131	-27	100	27	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129326134	129428647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
tx.8193	chr3	+	473	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4161	1993	4161	-1993	3prime_fragment	FALSE	canonical	3	92	junction_1	0	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTAATGGGATCCCTGT	NA	False	NA	NA	False	NA	NA	NA	129551567	129555540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_129551788_129555287
tx.8194	chr3	-	993	6	ISM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	542	0	78	0	3prime_fragment	FALSE	canonical	3	1505	junction_2	175.642136174666	318	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	False	NA	NA	False	NA	NA	NA	129624503	129618560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243
tx.8195	chr3	-	1041	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	230	0	194	0	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	490	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	False	NA	NA	False	NA	NA	NA	129624815	129618560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
tx.8196	chr3	-	435	3	ISM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	4503	2	387	-2	3prime_fragment	FALSE	canonical	3	1505	junction_2	0.5	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTATTGAACGGAACC	NA	False	NA	NA	False	NA	NA	NA	129620542	129618562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_129618859_129619196_129619266_129620472
tx.8197	chr3	-	1026	7	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-195	-2	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_6	620.417444593199	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTATTGAACGGAACC	NA	False	NA	NA	False	NA	NA	NA	129624776	129618562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624740
tx.8198	chr3	+	1437	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	115	9	-93	-5	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATCTCCTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	129672369	129689465	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
tx.8199	chr3	+	1302	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	5	149	5	-149	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCTAATTCCTATGTT	NA	False	NA	NA	False	NA	NA	NA	129695078	129707603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
tx.82	chr1	+	1065	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	32	-3	1	0	multi-exon	FALSE	canonical	3	315	junction_1	76.7739539166767	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	37469251	37478068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
tx.820	chr10	-	1106	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	-4	1	-3	-1	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGGCTGGATCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	31321854	31208373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
tx.8200	chr3	+	1076	5	ISM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	4582	152	-4455	-152	3prime_fragment	FALSE	canonical	3	125	junction_3	6.37867541108654	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACTTTCTAATTCCTAT	NA	False	NA	NA	False	NA	NA	NA	129699655	129707600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
tx.8201	chr3	-	1047	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	13	7	13	0	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	1300	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGAGTGTGGACTTT	NA	False	NA	NA	False	NA	NA	NA	130503080	130489567	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
tx.8202	chr3	-	610	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	12	2	-4	1	multi-exon	FALSE	canonical	3	513	junction_4	3512.03875085398	331	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTCCGTTATCTGTGATT	NA	False	NA	NA	False	NA	NA	NA	130523974	130520481	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
tx.8203	chr3	-	1448	4	ISM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	-10	4	0	-1	intron_retention	FALSE	canonical	3	7006	junction_1	1068.10122283528	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCTTCCGTTATCTGTGA	NA	False	NA	NA	False	NA	NA	NA	130523996	130520483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877
tx.8204	chr3	-	439	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	43	-2	-8	2	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	1208	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGCTTCCGTTATCTGT	NA	False	NA	NA	False	NA	NA	NA	130524004	130520485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
tx.8205	chr3	-	1731	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	35	23	35	-23	multi-exon	FALSE	canonical	3	722	junction_3	33.5492327841959	507	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATCCTTAAGTAATTAT	NA	False	NA	NA	False	NA	NA	NA	131065715	131027090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
tx.8206	chr3	-	1715	4	FSM	ENSMUSG00000027983.14	ENSMUST00000200236.2	1716	4	23	-22	23	22	multi-exon	FALSE	canonical	2	4	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCTGTTTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	131096826	131086914	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_131087334_131089036_131089199_131091434_131092071_131096328
tx.8207	chr3	+	2506	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	94	0	-3	0	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	27	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	False	NA	NA	False	NA	NA	NA	131270622	131349432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
tx.8208	chr3	-	1092	7	FSM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	34	0	-13	0	multi-exon	FALSE	canonical	3	854	junction_6	52.4195150259477	1068	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	False	NA	NA	False	NA	NA	NA	132389611	132366259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
tx.8209	chr3	+	2939	3	FSM	ENSMUSG00000028030.13	ENSMUST00000198147.5	5195	3	-13	2269	11	-2269	multi-exon	FALSE	canonical	1	21	junction_1	47	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCCTTATTGAATGG	NA	False	NA	NA	False	NA	NA	NA	132389915	132402621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_132390156_132392532_132392754_132400143
tx.821	chr10	-	2148	11	FSM	ENSMUSG00000039531.9	ENSMUST00000218055.2	2180	11	34	-2	0	2	multi-exon	FALSE	canonical	3	35	junction_10	16.213882940246	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCTTGTCTATGT	NA	False	NA	NA	False	NA	NA	NA	33827221	33795135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
tx.8210	chr3	-	3497	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	6	0	6	0	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCCTCTCAGAT	NA	False	NA	NA	False	NA	NA	NA	132797580	132687512	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
tx.8211	chr3	+	1620	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	84	1397	-14	-1397	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGATCTATTTATTTCAG	NA	False	NA	NA	False	NA	NA	NA	132797684	132815352	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
tx.8212	chr3	+	1165	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	52	9	40	2	multi-exon	TRUE	canonical	3	471	junction_4	36.8801946894343	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAACTTCTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	133015922	133083830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
tx.8213	chr3	+	1037	10	FSM	ENSMUSG00000028167.16	ENSMUST00000029817.11	1059	10	22	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	15.3099660916801	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTTTTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	134987043	135010187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_134987130_134991348_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
tx.8214	chr3	+	1110	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	62	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTTTTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	134987043	135010187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
tx.8215	chr3	+	1885	11	NIC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	-15	1035	combination_of_known_splicesites	FALSE	canonical	3	24	junction_9	33.9293383371972	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTTTATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	135053774	135099879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
tx.8216	chr3	+	1479	4	FSM	ENSMUSG00000050150.17	ENSMUST00000160047.8	1196	4	-31	-252	-14	13	multi-exon	FALSE	canonical	3	81	junction_1	29.6348143611905	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTTTTTTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	135053775	135064080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217
tx.8217	chr3	+	1474	4	NIC	ENSMUSG00000050150.17	novel	1407	4	NA	NA	-12	13	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	42.1030481873542	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTTTTTTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	135053777	135064080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217
tx.8218	chr3	+	1640	7	NIC	ENSMUSG00000050150.17	novel	1545	6	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	33.6324083123539	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTCTCAAAAATCAATTG	NA	False	NA	NA	False	NA	NA	NA	135053785	135080459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
tx.8219	chr3	+	1661	7	ISM	ENSMUSG00000050150.17	ENSMUST00000160460.8	2072	11	-51	18385	-22	-3	5prime_fragment	FALSE	canonical	3	60	junction_5	29.9146935282461	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTCTCAAAAATCAATTG	NA	False	NA	NA	False	NA	NA	NA	135053767	135080459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
tx.822	chr10	-	1681	9	ISM	ENSMUSG00000039531.9	ENSMUST00000218055.2	2180	11	2014	0	615	0	3prime_fragment	FALSE	canonical	3	50	junction_8	12.1030729568982	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	33825241	33795137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924
tx.8220	chr3	-	1044	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	505	1812	-13	1788	multi-exon	FALSE	canonical	3	215	junction_1	1	114	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTATTTTCATCATAAAA	NA	False	NA	NA	False	NA	NA	NA	135129181	135113984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_135114652_135116771_135116987_135129019
tx.8221	chr3	+	2112	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	17	-617	17	0	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	NA	False	NA	NA	NA	135144011	135172436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.8222	chr3	+	1930	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	58	-1250	58	16	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTTGAAGTGACTTAA	NA	False	NA	NA	False	NA	NA	NA	135144134	135172297	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.8223	chr3	+	2164	8	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_1	932.389841389604	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTGTTTGACAAGT	NA	False	NA	NA	False	NA	NA	NA	135144167	135172434	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.8224	chr3	+	2216	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	13	275	13	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	175	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	NA	False	NA	NA	NA	135144253	135172436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.8225	chr3	+	2144	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	166	1523	-16	0	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	NA	False	NA	NA	NA	135144491	135172436	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.8226	chr3	+	2378	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-11	148	-11	5	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCATGAGGCTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	135144886	135172286	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
tx.8227	chr3	+	3672	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	3	0	3	0	multi-exon	TRUE	canonical	3	85	junction_8	25.1755554804656	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	NA	False	NA	NA	False	NA	NA	NA	135191374	135277165	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
tx.8228	chr3	+	2376	9	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	59171	61	126	-61	3prime_fragment	FALSE	canonical	3	121	junction_1	15.4793208830362	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTGAAAGTTTATTTGC	8294	False	NA	NA	False	NA	NA	NA	135250542	135277104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
tx.8229	chr3	-	1716	7	ISM	ENSMUSG00000028163.18	ENSMUST00000129428.8	2520	13	14066	-227	24	0	3prime_fragment	FALSE	canonical	3	48	junction_1	5.39804491356722	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTGATCTCTGCAAA	NA	False	NA	NA	False	NA	NA	NA	135300178	135290415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969
tx.823	chr10	-	2096	11	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	23.419863364247	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	33827243	33795137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827198
tx.8230	chr3	+	854	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	53	1815	53	344	multi-exon	FALSE	canonical	3	67	junction_2	6.5	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTTTGCCTGC	NA	False	NA	NA	False	NA	NA	NA	137329485	137332279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_137329645_137329892_137330035_137331726
tx.8231	chr3	+	967	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	102	0	-2	0	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	5542	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	137570349	137572683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
tx.8232	chr3	+	1319	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	-26	2	-6	-2	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	294	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGAGCTCTGTATAGGC	54	False	NA	NA	False	NA	NA	NA	137624260	137634524	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
tx.8233	chr3	-	2857	8	ISM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	15541	0	-10137	0	3prime_fragment	FALSE	canonical	3	16	junction_1	5.72498997414682	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCAACTTTTATAACA	NA	False	NA	NA	False	NA	NA	NA	137671765	137636767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641
tx.8234	chr3	-	1390	9	FSM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	15	1678	0	-2	multi-exon	FALSE	canonical	3	16	junction_1	5.49431524395898	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGGGTTGCTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	137687291	137638445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
tx.8235	chr3	+	2435	8	NNC	ENSMUSG00000004127.13	novel	4025	8	NA	NA	20	-1541	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2811814618978	32	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	NA	False	NA	NA	NA	137849249	137864038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_137849353_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
tx.8236	chr3	+	2460	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	21	1544	0	-1541	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	NA	False	NA	NA	NA	137849229	137864038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
tx.8237	chr3	+	2266	7	ISM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	3924	1541	3531	-1541	3prime_fragment	FALSE	canonical	3	147	junction_6	16.8267313786394	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	-84	True	NA	NA	NA	137853201	137864038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
tx.8238	chr3	+	1402	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	19	183	0	73	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	2574	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4943	False	NA	NA	False	NA	NA	NA	138148872	138161077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
tx.8239	chr3	-	2598	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	91	-3	-26	3	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTTCTAGTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	138195185	138164713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
tx.824	chr10	-	982	7	FSM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	107	1	69	-1	multi-exon	FALSE	canonical	3	1217	junction_2	78.0243907733701	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTTTACTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	33895513	33872551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
tx.8240	chr3	+	1801	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	851	-1231	-9	416	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	645	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTACACTGATGTGGCT	NA	False	NA	NA	False	NA	NA	NA	138233036	138262391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
tx.8241	chr3	-	2386	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	15	2615	15	475	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGTTTAGTGAGTGT	7018	False	NA	NA	False	NA	NA	NA	142101439	141947965	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
tx.8242	chr3	-	2151	8	FSM	ENSMUSG00000028273.16	ENSMUST00000196908.5	1196	8	-49	-906	26	0	multi-exon	FALSE	canonical	3	7	junction_1	69.1041804459183	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATACTTGTTTTCTTT	7029	False	NA	NA	False	NA	NA	NA	142101428	142008075	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_142009183_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
tx.8243	chr3	+	1890	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	-6	4	-6	-4	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACACATACCTCATCTGC	NA	False	NA	NA	False	NA	NA	NA	142406805	142450284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
tx.8244	chr3	+	1698	13	NNC	ENSMUSG00000040213.14	novel	734	7	NA	NA	-10298	2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	24.2674622122344	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGTTGTACTTTCTC	NA	False	NA	NA	False	NA	NA	NA	142418577	142450101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_142418803_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
tx.8245	chr3	+	1274	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	181	0	3	0	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	164	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	False	NA	NA	False	NA	NA	NA	142470986	142489367	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
tx.8246	chr3	-	1639	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	26	4	-14	-4	multi-exon	FALSE	canonical	3	21	junction_4	8.32165848854662	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTTGGGTTTAAACGC	NA	False	NA	NA	False	NA	NA	NA	143910955	143894294	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
tx.8247	chr3	+	1223	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	288	3	0	-3	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	617	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTCTGCTTTGTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	144276474	144303438	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
tx.8248	chr3	+	1643	2	NNC	ENSMUSG00000085773.4	novel	1623	4	NA	NA	217	13722	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAAACAAAGC	NA	False	NA	NA	False	NA	NA	NA	144653538	144674361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_144653831_144673010
tx.825	chr10	-	825	2	FSM	ENSMUSG00000046031.8	ENSMUST00000062784.8	1094	2	272	-3	272	3	multi-exon	FALSE	canonical	3	41	junction_1	0	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCCCAAGTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	34003708	34002059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_34002563_34003386
tx.8251	chr3	+	2172	15	NNC	ENSMUSG00000028256.17	novel	913	7	NA	NA	-127	8	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	31.2253984795083	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTTTTAAAGATAGCAAG	NA	False	NA	NA	False	NA	NA	NA	144824607	144859664	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr3_+_144824690_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
tx.8252	chr3	+	1665	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	-7	681	-7	1	multi-exon	FALSE	canonical	3	657	junction_9	57.8243402122986	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	NA	False	NA	NA	False	NA	NA	NA	145281979	145309869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
tx.8253	chr3	+	1122	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	6	-1	6	1	multi-exon	TRUE	canonical	3	509	junction_1	98.0487633782293	201	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	NA	False	NA	NA	False	NA	NA	NA	145281965	145309869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
tx.8254	chr3	+	481	5	ISM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	16660	-1	-3003	1	3prime_fragment	FALSE	canonical	3	657	junction_4	74.4949662728966	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	5873	False	NA	NA	False	NA	NA	NA	145298619	145309869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
tx.8255	chr3	-	2019	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAATGTATGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	145355736	145352730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
tx.8256	chr3	+	1844	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	33	72	33	-72	multi-exon	FALSE	canonical	3	334	junction_2	11.5	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGTGTCTGAGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	145630049	145640039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_145630271_145636160_145636450_145638705
tx.8257	chr3	+	1034	3	FSM	ENSMUSG00000036873.14	ENSMUST00000190472.2	724	3	-275	-35	-4	35	multi-exon	FALSE	canonical	3	74	junction_2	94.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTATTACTGAATGCC	NA	False	NA	NA	False	NA	NA	NA	145643764	145650032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_145644084_145644652_145644852_145649516
tx.8258	chr3	+	1530	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	17	0	-11	0	multi-exon	FALSE	canonical	3	242	junction_2	10.5	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTTAGCATCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	145643785	145650584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_145644084_145644652_145644852_145649551
tx.8259	chr3	+	1102	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	-8	550	-8	35	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTATTACTGAATGCC	NA	False	NA	NA	False	NA	NA	NA	145643788	145650032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
tx.826	chr10	-	593	4	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-37	693	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	24.9131825880731	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	34109564	34106209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_34106388_34106902_34107071_34107314_34107400_34109402
tx.8260	chr3	+	2819	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	0	73	0	5	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATATAATTTTTAATTT	5954	False	NA	NA	False	NA	NA	NA	146156224	146171531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
tx.8261	chr3	+	508	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	59	26	-24	-1	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	639	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCCTCCTTACTGAT	NA	False	NA	NA	False	NA	NA	NA	146205620	146211301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_146205776_146209014_146209155_146211088
tx.8262	chr3	-	1257	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	16	388	-2	0	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	381	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAGGTATTAAAGTCC	NA	False	NA	NA	False	NA	NA	NA	146227168	146212098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
tx.8263	chr3	-	1610	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	17	junction_3	6.40624695121879	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGGGTATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	151871881	151799475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
tx.8264	chr3	+	2434	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	-59	-1	-13	0	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	NA	False	NA	NA	NA	151916096	151938409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
tx.8265	chr3	+	2415	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	54	4054	3	0	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	NA	False	NA	NA	NA	151916112	151938409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
tx.8266	chr3	-	1712	6	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	-25	38373	-1	11445	5prime_fragment	FALSE	canonical	3	188	junction_4	9.69535971483266	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTCTCTTAACTGTGG	NA	False	NA	NA	False	NA	NA	NA	152046045	152025586	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
tx.8267	chr3	+	1552	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	6	3179	0	-1	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	213	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGGTTTGTGTGTGCTGT	3963	False	NA	NA	False	NA	NA	NA	152419742	152491484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
tx.8268	chr3	-	2235	2	ISM	ENSMUSG00000052544.10	ENSMUST00000199707.2	416	3	19055	-1898	19055	1898	3prime_fragment	FALSE	canonical	3	111	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGCGTTGTTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	152912365	152909104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_-_152911229_152912254
tx.8269	chr3	-	2306	9	FSM	ENSMUSG00000065463.3_ENSMUSG00000038975.15	ENSMUST00000196266.5	1271	9	-870	-165	4	0	multi-exon	FALSE	canonical	3	426	junction_3	203.564140690348	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6158	False	NA	NA	False	NA	NA	NA	153618588	153612925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
tx.827	chr10	-	2749	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	-6	0	-6	0	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	NA	False	NA	NA	NA	34294554	34179604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
tx.8270	chr3	-	1324	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	57	0	3	0	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	459	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	NA	False	NA	NA	NA	153618589	153612925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
tx.8271	chr3	-	1889	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	158	0	-7	0	multi-exon	TRUE	canonical	3	875	junction_11	59.2580851965116	500	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	150	False	NA	NA	False	NA	NA	NA	153650111	153627993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
tx.8272	chr3	-	1093	6	FSM	ENSMUSG00000047583.10	ENSMUST00000052774.8	4490	6	-6	3403	3	11	multi-exon	FALSE	canonical	3	59	junction_2	5.35163526410386	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAAAGCAAGGTTACTT	NA	False	NA	NA	False	NA	NA	NA	154302738	154285470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
tx.8273	chr3	+	2033	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	474	0	-12	0	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	130	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	False	NA	NA	False	NA	NA	NA	154302821	154328819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
tx.8274	chr3	+	2733	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-31	35	-2	5	multi-exon	TRUE	canonical	3	77	junction_9	297.644569915193	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGTTGTTTATTAGAA	NA	False	NA	NA	False	NA	NA	NA	157239993	157253978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
tx.8275	chr3	+	2647	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	208	69	-8	5	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	195	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGTTGTTTATTAGAA	NA	False	NA	NA	False	NA	NA	NA	157240004	157253978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
tx.8276	chr3	+	2288	6	ISM	ENSMUSG00000028180.19	ENSMUST00000184802.8	2542	9	6279	-3	-13	3	3prime_fragment	FALSE	canonical	3	697	junction_4	49.1756037075296	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTGTTGTTTATTAG	NA	False	NA	NA	False	NA	NA	NA	157246274	157253976	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
tx.8277	chr3	-	1801	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	14	0	-12	0	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	683	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTGATCCTACTTT	NA	False	NA	NA	False	NA	NA	NA	157630700	157599884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
tx.8278	chr3	-	1364	2	FSM	ENSMUSG00000055436.19	ENSMUST00000145267.2	521	2	132	-975	132	0	multi-exon	FALSE	canonical	3	573	junction_1	0	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	157718025	157716555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_157717841_157717946
tx.8279	chr3	-	2619	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	36	-1	24	1	multi-exon	TRUE	canonical	3	573	junction_1	36.7913482463625	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTCTGTAGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	157737367	157716554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
tx.828	chr10	+	1032	7	ISM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	19265	0	2043	0	3prime_fragment	FALSE	canonical	3	1167	junction_6	73.2243508373789	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTGTCTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	36869804	36877885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
tx.8280	chr3	-	2640	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	20	446	-4	0	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	157742256	157716555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
tx.8281	chr3	-	2661	13	FSM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	-68	-950	-4	0	multi-exon	FALSE	canonical	3	86	junction_3	173.80710492446	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	157742256	157716555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
tx.8282	chr3	+	2706	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	39	1397	1	1	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	157742337	157772727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
tx.8283	chr3	+	2320	12	NIC	ENSMUSG00000063052.10	novel	2450	13	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	239.919235721985	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	157742337	157772727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_157742514_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
tx.8284	chr3	+	2619	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	146	junction_2	190.962278254048	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	157742350	157772727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
tx.8285	chr3	+	2448	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	1	1	1	-1	multi-exon	TRUE	canonical	3	70	junction_1	215.046296694973	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTATAGTGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	157742337	157772725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
tx.8286	chr3	+	794	4	ISM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	-33	13726	-8	-13726	5prime_fragment	FALSE	canonical	3	57	junction_3	8.5764535535124	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAAATATGCATTATG	NA	False	NA	NA	False	NA	NA	NA	159201061	159221370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141
tx.8287	chr3	+	3304	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	19	0	1	0	multi-exon	FALSE	canonical	3	37	junction_11	13.4778667659976	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	NA	NA	NA	159201088	159235592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
tx.8288	chr3	+	2863	10	ISM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	18802	0	18777	0	3prime_fragment	FALSE	canonical	3	37	junction_9	12.6617924344984	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	NA	NA	NA	159219871	159235592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr3_+_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
tx.8289	chr3	+	2678	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	31	850	31	270	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCTTCCTGTCCCAACA	NA	False	NA	NA	False	NA	NA	NA	159545339	159640809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
tx.829	chr10	+	622	4	ISM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	23507	0	-121	0	3prime_fragment	FALSE	canonical	3	1167	junction_3	69.7567201063812	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTGTCTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	36874046	36877885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_36874094_36874409_36874566_36876364_36876423_36877524
tx.8290	chr4	-	2424	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	44	222	0	-222	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTGAGATTCTTC	-11	True	NA	NA	False	NA	NA	NA	3574809	3549262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
tx.8291	chr4	-	2419	8	NNC	ENSMUSG00000028232.14	novel	2690	8	NA	NA	-5	-222	intron_retention	FALSE	canonical	0	0	junction_6	25.7840323946937	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTGAGATTCTTC	-16	True	NA	NA	False	NA	NA	NA	3574814	3549262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570330_3570373_3574703
tx.8292	chr4	+	3210	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	-9	1126	-9	210	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTGTAATCCCTATTGAA	2	True	NA	NA	False	NA	NA	NA	3574865	3615493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
tx.8293	chr4	+	534	4	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	-13	31125	-13	1563	5prime_fragment	FALSE	canonical	3	157	junction_3	13.1402688962847	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAACACCAGAAGCGG	-2	True	NA	NA	False	NA	NA	NA	3574861	3585494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451
tx.8294	chr4	+	2571	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	-33	849	-21	-849	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATGACTTGAACATTT	4	True	NA	NA	False	NA	NA	NA	3678093	3790763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
tx.8295	chr4	+	2928	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-1	536	-1	-535	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCTTGTGTATCA	-8	True	NA	NA	False	NA	NA	NA	3678113	3791077	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
tx.8296	chr4	-	505	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	65	3136	65	0	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	21436	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-2	True	NA	NA	False	NA	NA	NA	3835600	3834469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
tx.8297	chr4	+	557	5	FSM	ENSMUSG00000042198.13	ENSMUST00000108386.8	524	5	-30	-3	-30	0	multi-exon	FALSE	canonical	3	128	junction_1	133.401649165218	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3938857	3943526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_3938963_3939378_3939527_3941245_3941312_3942720_3942820_3943387
tx.8298	chr4	+	506	5	FSM	ENSMUSG00000042198.13	ENSMUST00000149544.8	426	5	-26	-54	-24	0	multi-exon	FALSE	canonical	3	70	junction_1	158.419537936455	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3938863	3943526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_3938963_3939423_3939527_3941245_3941312_3942720_3942820_3943387
tx.8299	chr4	+	673	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	-3	2	-3	0	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	293	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	-8	True	NA	NA	False	NA	NA	NA	3938910	3943526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
tx.83	chr1	+	1109	6	NIC	ENSMUSG00000026111.16	novel	1179	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	188.928134485047	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	37469262	37478068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr1_+_37469419_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
tx.830	chr10	+	1762	3	FSM	ENSMUSG00000046463.6	ENSMUST00000217338.2	337	3	-36	-1389	-36	670	multi-exon	FALSE	canonical	3	7	junction_1	7.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATAATTACAATCCT	NA	False	NA	NA	False	NA	NA	NA	37017048	37027981	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_37017182_37024872_37025003_37026482
tx.8300	chr4	-	1340	3	NNC	ENSMUSG00000045573.10	novel	721	3	NA	NA	-42	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGATATTGTAAGAACTG	146	False	NA	NA	False	NA	NA	NA	4138861	4133535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_4134508_4138005_4138147_4138634
tx.8301	chr4	+	2214	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	-16	-1580	-16	16	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCGATTTCTTCGATAT	NA	False	NA	NA	False	NA	NA	NA	5644073	5799962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
tx.8302	chr4	+	2106	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	50	1054	-19	101	multi-exon	FALSE	canonical	3	35	junction_1	17	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTTGAGAGCAGAAT	-2	True	NA	NA	False	NA	NA	NA	5644170	5800047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_5644411_5729570_5729658_5798268
tx.8303	chr4	+	1610	9	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	-9	-5125	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_3	55.7808210767823	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTGTCCTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	6191088	6216563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_6191214_6196410_6196515_6198000_6198085_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
tx.8304	chr4	+	1577	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	5	5060	5	-5060	multi-exon	FALSE	canonical	3	103	junction_2	16.4614577676685	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCAGCTCTTGGTAAGA	-5	True	NA	NA	False	NA	NA	NA	6191102	6216628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
tx.8305	chr4	+	2081	9	FSM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	6	-1	6	1	multi-exon	FALSE	canonical	3	130	junction_4	110.946425697271	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGTCTGTCTGTGCCTGC	1	True	NA	NA	False	NA	NA	NA	6365682	6395656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
tx.8306	chr4	+	2080	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	36	629	9	0	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	260	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGTCTGTCTGTGCCTG	4	True	NA	NA	False	NA	NA	NA	6365685	6395655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
tx.8307	chr4	-	1939	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	0	1914	0	-1914	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCACTCTCAATTTGG	-1	True	NA	NA	False	NA	NA	NA	8239041	8145275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
tx.8308	chr4	-	1086	9	NNC	ENSMUSG00000041261.10	novel	3853	9	NA	NA	0	-20275	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.4095809233609	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCATTTTTTCTTGGTCT	-1	True	NA	NA	False	NA	NA	NA	8239041	8163636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_8163725_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
tx.8309	chr4	+	1892	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	171	70	171	-70	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTTCTCATGATGAGC	81	False	NA	NA	False	NA	NA	NA	8535814	8607708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
tx.831	chr10	+	1156	4	NNC	ENSMUSG00000046463.6	novel	337	3	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	8.73053390247253	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	37017069	37027313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_37017182_37022269_37022353_37024872_37025003_37026482
tx.8310	chr4	+	1658	5	ISM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	42311	70	42311	-70	3prime_fragment	FALSE	canonical	3	1070	junction_3	63.2351761284809	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTTCTCATGATGAGC	NA	False	NA	NA	False	NA	NA	NA	8577954	8607708	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
tx.8311	chr4	+	2104	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	16	-4	-11	0	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTCTGTGCAATTAT	-3	True	NA	NA	False	NA	NA	NA	10874513	10899425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
tx.8312	chr4	-	2785	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	192	0	192	0	multi-exon	FALSE	canonical	3	844	junction_1	0	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTTATATTG	161	False	NA	NA	False	NA	NA	NA	11007484	10988661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_10991355_11007392
tx.8313	chr4	-	1086	9	FSM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	-1	-3	0	3	multi-exon	TRUE	canonical	0	0	junction_7	119.468549731718	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTGAGTTTTTTT	-20	True	NA	NA	False	NA	NA	NA	11076205	11051041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
tx.8314	chr4	-	949	9	NNC	ENSMUSG00000050323.15	novel	675	6	NA	NA	1	-802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	143.326550227095	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGAGCGTCACAGCACA	-18	True	NA	NA	False	NA	NA	NA	11076203	11052014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_11052064_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
tx.8315	chr4	+	1581	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	-14	3865	-4	2500	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTTTTTTTTTCTCCC	-6	True	NA	NA	False	NA	NA	NA	11156426	11170514	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
tx.8316	chr4	+	2645	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	53	210	47	-203	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTTTGCCATTGCTT	0	True	NA	NA	False	NA	NA	NA	11191782	11204472	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
tx.8317	chr4	+	2340	13	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	109.197323939534	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTGTATCCTTAAGT	NA	False	NA	NA	False	NA	NA	NA	11558910	11615807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_11559014_11563326_11563430_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11615442
tx.8318	chr4	+	2433	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	-22	-8	-2	8	multi-exon	FALSE	canonical	3	32	junction_3	85.9883713068226	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATTTATGTTATGTA	-27	True	NA	NA	False	NA	NA	NA	11558919	11585752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
tx.8319	chr4	+	2461	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	86.901724506607	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTGTATCCTTAAGT	-27	True	NA	NA	False	NA	NA	NA	11558919	11615807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11615442
tx.832	chr10	+	1691	3	NNC	ENSMUSG00000046463.6	novel	1791	3	NA	NA	1379	678	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACAATCCTCAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	37018463	37027989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_37018518_37024872_37025003_37026482
tx.8320	chr4	+	2924	15	FSM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	-52	-2	-2	2	multi-exon	FALSE	canonical	3	142	junction_12	66.7496464868725	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTGTATCCTTAAGT	-27	True	NA	NA	False	NA	NA	NA	11558919	11615807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
tx.8321	chr4	+	2714	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	8	3	combination_of_known_splicesites	FALSE	canonical	3	84	junction_13	71.5348220745028	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATCCTTAAGTG	-17	True	NA	NA	False	NA	NA	NA	11558929	11615808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11615442
tx.8322	chr4	+	2513	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	-2	8	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	91.7261549395809	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATTTATGTTATGTA	-27	True	NA	NA	False	NA	NA	NA	11558919	11585752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11583676
tx.8323	chr4	-	2557	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	25	1619	0	4	multi-exon	FALSE	canonical	3	21	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTATGTTTAATTCTTAT	-13	True	NA	NA	False	NA	NA	NA	11966427	11959802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_11962234_11966301
tx.8324	chr4	-	1474	9	ISM	ENSMUSG00000049488.15	ENSMUST00000131145.9	3533	29	34356	-1	34345	1	3prime_fragment	FALSE	canonical	3	34	junction_4	3.85478598627732	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAAATTTTGGTTTGCGT	NA	False	NA	NA	False	NA	NA	NA	12053582	12039361	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446
tx.8325	chr4	+	3404	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-65	28	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	14.4299072146089	1	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	-11	True	NA	NA	False	NA	NA	NA	12089373	12096271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_12089506_12089662_12089728_12092522_12092573_12093114
tx.8326	chr4	-	1129	8	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	42	52908	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	130.899556445204	146	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACACAGTCTTTCT	3	True	NA	NA	False	NA	NA	NA	12171829	12100500	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
tx.8327	chr4	-	1135	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	41	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	135.606423302203	121	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATAGTCTTTCTTTCAT	2	True	NA	NA	False	NA	NA	NA	12171830	12153721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
tx.8328	chr4	+	2222	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-46	1123	multi-exon	FALSE	canonical	3	4269	junction_1	0	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGGCATGCTTTC	2	True	NA	NA	False	NA	NA	NA	12232786	12235074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr4_+_12232839_12232904
tx.8329	chr4	+	1373	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	711	3617	multi-exon	FALSE	canonical	3	49	junction_1	0	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTCCACTGTCATTTC	402	False	NA	NA	False	NA	NA	NA	12233543	12237568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr4_+_12233967_12236618
tx.833	chr10	-	737	5	FSM	ENSMUSG00000051736.9	ENSMUST00000063204.9	745	5	8	0	2	0	multi-exon	FALSE	canonical	3	17	junction_3	5.93190525885234	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGACTCTTCCATTTTA	NA	False	NA	NA	False	NA	NA	NA	39009894	38994799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_38995031_38996253_38996393_38998172_38998332_39008242_39008375_39009818
tx.8330	chr4	+	3601	5	FSM	ENSMUSG00000055963.13	ENSMUST00000183345.2	3545	5	-56	0	-36	0	multi-exon	FALSE	canonical	2	7	junction_2	1.87082869338697	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAATTTAGCATTTTTG	0	True	NA	NA	False	NA	NA	NA	12906801	12983553	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_12906939_12917915_12918066_12962944_12963024_12974729_12974816_12980404
tx.8331	chr4	-	3090	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	169	-2	-23	2	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	151	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATTCAAATTGT	0	True	NA	NA	False	NA	NA	NA	14826418	14809504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
tx.8332	chr4	+	2297	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	131	-89	131	89	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	181	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGTTCTATTTCTTC	-61	True	NA	NA	False	NA	NA	NA	14864206	14915265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
tx.8333	chr4	+	855	6	FSM	ENSMUSG00000086587.8	ENSMUST00000136992.8	876	6	19	2	4	-2	multi-exon	FALSE	canonical	3	31	junction_5	12.687001221723	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATATGGTACAGAATTT	19	True	NA	NA	False	NA	NA	NA	14930679	14953028	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14947438_14947546_14952620
tx.8334	chr4	-	1170	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	125	1664	-107	-1664	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGAGTGTCTGCTCTGCT	-9	True	NA	NA	False	NA	NA	NA	15945382	15918903	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
tx.8335	chr4	+	2507	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	26	0	-16	0	multi-exon	TRUE	canonical	3	165	junction_3	27.9629914152418	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-19	True	NA	NA	False	NA	NA	NA	15957950	15992589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
tx.8336	chr4	+	967	6	ISM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	23402	0	23360	0	3prime_fragment	FALSE	canonical	3	214	junction_4	21.3316666015574	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	4914	False	NA	NA	False	NA	NA	NA	15981326	15992589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
tx.8337	chr4	-	2518	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	37	103	-30	3	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGAACACTGAGT	-6	True	NA	NA	False	NA	NA	NA	16013851	15997223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
tx.8338	chr4	-	2489	6	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-30	3	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	32.8852550545073	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGAACACTGAGT	-6	True	NA	NA	False	NA	NA	NA	16013851	15997223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013686
tx.8339	chr4	-	4074	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	11	1563	11	-1563	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAGCCAAAACACATTTAA	-2	True	NA	NA	False	NA	NA	NA	19570097	19520816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
tx.834	chr10	+	2106	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-33	856	14	105	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAACGGCTGCTACGG	NA	False	NA	NA	False	NA	NA	NA	39009985	39026198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
tx.8340	chr4	+	1141	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-127	720	-82	-720	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	53	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGGCTTTTTTTCTCA	8	True	NA	NA	False	NA	NA	NA	19575079	19606212	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
tx.8341	chr4	-	3322	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	52	3066	52	-1696	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGCTTTGCCTTGTTT	22	True	NA	NA	False	NA	NA	NA	19708941	19611368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
tx.8342	chr4	+	2648	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	210	4	-140	-4	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATGGTGTTTATATT	227	False	NA	NA	False	NA	NA	NA	20008216	20030466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
tx.8343	chr4	+	2815	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	-77	315	-6	0	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	361	False	NA	NA	False	NA	NA	NA	20008350	20030470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
tx.8344	chr4	+	2293	3	ISM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	12839	315	12839	0	3prime_fragment	FALSE	canonical	3	64	junction_2	4	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	NA	False	NA	NA	False	NA	NA	NA	20021266	20030470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_20021386_20023784_20023896_20028407
tx.8345	chr4	+	1293	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	33	639	33	-639	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	135	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGTGATTATTGGC	8	True	NA	NA	False	NA	NA	NA	20042084	20066111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
tx.8346	chr4	+	1456	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	-50	0	4	0	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTTCTGGATTTT	-1	True	NA	NA	False	NA	NA	NA	21727704	21747962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
tx.8347	chr4	+	3383	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	-21	3	4	-3	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTTTCTTTTTAA	-1	True	NA	NA	False	NA	NA	NA	21727704	21750543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
tx.8348	chr4	-	1569	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	19	0	19	0	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	196	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCATGTATTTCTTTAA	2	True	NA	NA	False	NA	NA	NA	21767193	21757381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
tx.8349	chr4	+	904	6	ISM	ENSMUSG00000028248.16	ENSMUST00000108229.2	2922	8	-13	9231	-3	-12	5prime_fragment	FALSE	canonical	3	402	junction_3	41.0346195303429	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAGGCCACTGAAGA	-14	True	NA	NA	False	NA	NA	NA	21848044	21862111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986
tx.835	chr10	-	1870	2	Antisense	novelGene_ENSMUSG00000019843.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAACAGTGACATTTACTC	NA	False	NA	-72	True	NA	NA	NA	39379307	39377097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_-_39378860_39379199
tx.8350	chr4	+	3104	11	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	462	1219	-3	0	intron_retention	FALSE	canonical	3	310	junction_8	50.2622124463299	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-14	True	NA	NA	False	NA	NA	NA	21848044	21875256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
tx.8351	chr4	+	2862	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	464	1219	-1	0	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-12	True	NA	NA	False	NA	NA	NA	21848046	21875256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
tx.8352	chr4	+	1027	2	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	26407	1219	-214	0	3prime_fragment	FALSE	canonical	3	306	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	208	False	NA	NA	False	NA	NA	NA	21873989	21875256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_21874673_21874912
tx.8353	chr4	+	1258	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	0	1393	0	-1393	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	425	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTGTCACCTAAGAGA	-10	True	NA	NA	False	NA	NA	NA	21879672	21910769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
tx.8354	chr4	+	2513	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	33	0	5	0	multi-exon	FALSE	canonical	3	42	junction_4	14.7627063914446	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-6	True	NA	NA	False	NA	NA	NA	22357575	22434091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
tx.8355	chr4	+	1357	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	-3	-4	-3	4	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTCTCGTTGATAAAG	-8	True	NA	NA	False	NA	NA	NA	24496458	24503417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
tx.8356	chr4	+	1156	6	NNC	ENSMUSG00000045751.17	novel	1350	5	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	143.521426971724	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTCTCGTTGATAAAG	-4	True	NA	NA	False	NA	NA	NA	24496462	24503417	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_24496635_24496831_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
tx.8357	chr4	-	2458	11	FSM	ENSMUSG00000040387.17	ENSMUST00000108218.10	7143	11	4	4681	4	38	multi-exon	TRUE	canonical	1	2	junction_4	2.76405499221705	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCGAGAATTTTGTCACT	NA	False	NA	NA	False	NA	NA	NA	24851120	24617234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_24617547_24626896_24626992_24629159_24629353_24632642_24632702_24649539_24650267_24682054_24682271_24708952_24709052_24743857_24743966_24792616_24792798_24800805_24800891_24850737
tx.8358	chr4	+	1102	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-32	1288	16	-1268	multi-exon	FALSE	canonical	3	446	junction_1	0	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGTTCTTTGTAGT	-21	True	NA	NA	False	NA	NA	NA	24898098	24902217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_24898677_24901693
tx.8359	chr4	+	2110	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	16	1506	16	-10	multi-exon	FALSE	canonical	3	446	junction_2	23.5	269	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTAGCCCACTTTTCTGGT	-21	True	NA	NA	False	NA	NA	NA	24898098	24903495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_24898303_24898572_24898677_24901693
tx.836	chr10	+	2097	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	288	482	288	0	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTTATCTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	39489217	39530821	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
tx.8360	chr4	-	2772	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	0	1544	0	-2	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGACTTGTTTGTTAT	-6	True	NA	NA	False	NA	NA	NA	25281821	25250148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
tx.8361	chr4	-	1427	12	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	-12	10666	-12	-9124	5prime_fragment	FALSE	canonical	3	188	junction_2	16.3489833383714	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGGGAAGAAAAGATG	14	False	NA	NA	False	NA	NA	NA	25281833	25259270	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
tx.8362	chr4	-	2543	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	296	9295	5	271	multi-exon	FALSE	canonical	3	36	junction_2	8.5	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTAAATTTTTGTTTTTG	-24	True	NA	NA	False	NA	NA	NA	25799850	25618626	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_25620821_25709027_25709115_25799588
tx.8363	chr4	-	2469	4	NNC	ENSMUSG00000055373.9	novel	12134	3	NA	NA	42	113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.7521042876493	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTATCTGATCATTTAAA	13	True	NA	NA	False	NA	NA	NA	25799813	25618784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_25620821_25709027_25709115_25755552_25755674_25799588
tx.8364	chr4	-	1029	2	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAGTCTGTGTTATTG	6341	False	NA	NA	False	NA	NA	NA	32160953	32159024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_-_32159894_32160793
tx.8365	chr4	+	1991	7	ISM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-42	12417	-20	1347	5prime_fragment	FALSE	canonical	3	150	junction_1	38.5818034253916	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAATGAAGGAAGAAAAGA	-18	True	NA	NA	False	NA	NA	NA	32615430	32640848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363
tx.8366	chr4	+	1257	4	ISM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	30703	0	22097	0	3prime_fragment	FALSE	canonical	3	269	junction_2	25.694789787469	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	32646180	32653265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_32646661_32648026_32648127_32649172_32649258_32652673
tx.8367	chr4	+	1337	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	9	-881	9	705	multi-exon	FALSE	canonical	3	270	junction_2	3	106	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATCATCATTAAGGAG	-6	True	NA	NA	False	NA	NA	NA	32800261	32802264	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_32800336_32800609_32800751_32801142
tx.8368	chr4	+	1482	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	294	3232	-123	130	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGTACAATAACAGTGAGA	5	True	NA	NA	False	NA	NA	NA	32983330	33018948	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
tx.8369	chr4	+	1570	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	80	1880	-32	-1880	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGAAGATCTTTGTTATA	48	True	NA	NA	False	NA	NA	NA	33031495	33050483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
tx.8370	chr4	+	1908	6	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	19786	0	19786	0	3prime_fragment	FALSE	canonical	3	14	junction_2	4.22374241638857	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGATGTCATCACTGACT	NA	False	NA	NA	False	NA	NA	NA	33152306	33163588	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
tx.8371	chr4	-	608	2	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTTTCAACGTTATT	NA	False	NA	NA	False	NA	NA	NA	33193629	33192655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_-_33193159_33193524
tx.8372	chr4	+	2442	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	17	1698	0	2	multi-exon	TRUE	canonical	3	214	junction_12	34.6965256025569	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTCTTCTGGTTTTGTT	-19	True	NA	NA	False	NA	NA	NA	33310327	33500916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
tx.8373	chr4	+	2610	17	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	92.7669922103223	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTCTTCTGGTTTTGTT	-3	True	NA	NA	False	NA	NA	NA	33310343	33500916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
tx.8374	chr4	+	774	6	ISM	ENSMUSG00000028274.18	ENSMUST00000029942.8	2379	16	20	169855	20	5021	5prime_fragment	FALSE	canonical	3	283	junction_5	17.7718879132184	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAAAGAGCGGTTAAAA	1	True	NA	NA	False	NA	NA	NA	33310347	33331059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841
tx.8375	chr4	-	2273	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	-7	0	-7	0	multi-exon	FALSE	canonical	3	292	junction_6	92.190426792828	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	-12	True	NA	NA	False	NA	NA	NA	34614920	34570795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
tx.8376	chr4	-	2279	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	21	0	-10	0	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	100	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	-15	True	NA	NA	False	NA	NA	NA	34614923	34570795	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
tx.8377	chr4	+	1864	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	4	0	0	0	multi-exon	TRUE	canonical	3	576	junction_1	51.5992441268264	323	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	-8	True	NA	NA	False	NA	NA	NA	34614960	34660167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
tx.8378	chr4	+	1963	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_9	178.38710715744	40	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	-4	True	NA	NA	False	NA	NA	NA	34614964	34660167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
tx.8379	chr4	-	1177	3	ISM	ENSMUSG00000028293.15	ENSMUST00000151549.8	1141	6	13908	-636	13815	0	3prime_fragment	FALSE	canonical	3	138	junction_1	6.5	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	NA	False	NA	NA	False	NA	NA	NA	34669554	34663256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_34664231_34668925_34669061_34669486
tx.838	chr10	-	1343	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	4	89	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	393.075374451262	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTACTATGGGAAGTGCC	6561	False	NA	NA	False	NA	NA	NA	40123028	40099333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120580_40120714_40122948
tx.8380	chr4	-	2032	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	7	0	7	0	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	-14	True	NA	NA	False	NA	NA	NA	34687431	34663256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
tx.8381	chr4	-	1719	11	FSM	ENSMUSG00000028294.16	ENSMUST00000108136.8	1688	11	-24	-7	4	7	multi-exon	FALSE	canonical	2	4	junction_2	1.88679622641132	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTATTTTTTTCCTGAC	-8	True	NA	NA	False	NA	NA	NA	34730202	34711324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_34711596_34714394_34714536_34716304_34716504_34719044_34719165_34719572_34719782_34721415_34721575_34722607_34722797_34724814_34724906_34727904_34727989_34728795_34728909_34730059
tx.8382	chr4	-	2234	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	-14	-1438	-14	1438	multi-exon	FALSE	canonical	3	19	junction_2	76	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCCAGAAAGACAAACATG	-27	True	NA	NA	False	NA	NA	NA	34778378	34767225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_34769148_34771257_34771415_34778223
tx.8383	chr4	-	737	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	45	4	-14	-4	multi-exon	FALSE	canonical	3	160	junction_2	5.5	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTGGTTTGAGTTTTTC	-27	True	NA	NA	False	NA	NA	NA	34778378	34768667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_34769148_34771257_34771415_34778278
tx.8384	chr4	+	625	2	NNC	ENSMUSG00000028298.11	novel	687	4	NA	NA	12596	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGATGTGCCGCCTTCT	1230	False	NA	NA	False	NA	NA	NA	34906383	34907370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_34906704_34907065
tx.8385	chr4	-	2396	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	-6	3640	-6	-3640	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGTAGACATGAATGTA	-38	True	NA	NA	False	NA	NA	NA	35157490	34952713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
tx.8386	chr4	-	3168	11	FSM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	27	-2	-19	0	multi-exon	FALSE	canonical	3	67	junction_8	10.8355895086516	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTTTAGTTCATTAT	-30	True	NA	NA	False	NA	NA	NA	35225853	35191284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
tx.8387	chr4	+	3502	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	330	0	330	0	multi-exon	TRUE	canonical	3	234	junction_5	35.2306684580353	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGGCTTTGGAGTTGA	4	True	NA	NA	False	NA	NA	NA	40143410	40198338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
tx.8388	chr4	+	2684	15	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	33414	0	9618	0	3prime_fragment	FALSE	canonical	3	255	junction_2	31.338588718338	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGGCTTTGGAGTTGA	NA	False	NA	NA	False	NA	NA	NA	40176494	40198338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
tx.8389	chr4	+	1610	7	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	43240	0	-4209	0	3prime_fragment	FALSE	canonical	3	270	junction_5	34.6862925215263	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGGCTTTGGAGTTGA	1351	False	NA	NA	False	NA	NA	NA	40186320	40198338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
tx.839	chr10	-	1225	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	4	67	4	-67	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	96	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTTGGATCATACTC	6561	False	NA	NA	False	NA	NA	NA	40123028	40099489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
tx.8390	chr4	-	2469	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	2	1062	2	10	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTCCCTGACGTGGCTT	-7	True	NA	NA	False	NA	NA	NA	40220598	40204838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
tx.8391	chr4	-	3842	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	9	5	9	-5	multi-exon	FALSE	canonical	3	214	junction_1	19	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTTTCTGTGCAACAT	-28	True	NA	NA	False	NA	NA	NA	40269841	40259605	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_40263082_40268303_40268502_40269673
tx.8392	chr4	+	331	2	FSM	ENSMUSG00000028407.5	ENSMUST00000129758.3	1044	2	-3	716	-3	-2	multi-exon	FALSE	canonical	3	97	junction_1	0	68	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGTGTGGCCTTTTGTG	-4	True	NA	NA	False	NA	NA	NA	40269575	40270224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_40269720_40270037
tx.8393	chr4	-	568	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	20	71	8	3	multi-exon	FALSE	canonical	3	2502	junction_3	28.8251433455046	1561	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTCCGTGTTACTGTC	10	True	NA	NA	False	NA	NA	NA	40279401	40270661	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
tx.8394	chr4	-	1392	8	FSM	ENSMUSG00000028411.16	ENSMUST00000030119.10	5250	8	-2	3860	-2	0	multi-exon	FALSE	canonical	3	144	junction_6	8.59757915618919	154	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGATTGTGTAGTAT	-1	True	NA	NA	False	NA	NA	NA	40703196	40686241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
tx.8395	chr4	+	1471	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	50	1855	-29	-791	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	2491	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCCTGTATGTATGAT	-7	True	NA	NA	False	NA	NA	NA	40722529	40733109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
tx.8396	chr4	-	1788	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	56	574	16	-574	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	1405	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTGCTCATAAGGGGG	-11	True	NA	NA	False	NA	NA	NA	40757867	40737115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
tx.8397	chr4	-	1618	4	ISM	ENSMUSG00000028416.14	ENSMUST00000030125.5	1295	7	6659	-1111	6659	1108	3prime_fragment	FALSE	canonical	3	1821	junction_3	195.380540370723	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGGCTTCAAGGTGCTC	6725	False	NA	NA	False	NA	NA	NA	40941584	40935289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524
tx.8398	chr4	-	1156	7	FSM	ENSMUSG00000028416.14	ENSMUST00000030125.5	1295	7	123	16	123	-16	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTGTGTTTTCTCAT	189	False	NA	NA	False	NA	NA	NA	40948120	40936416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
tx.8399	chr4	-	1129	8	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	-20	-16	at_least_one_novel_splicesite	FALSE	canonical	3	161	junction_7	669.499477983671	18	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTGTGTTTTCTCAT	-5	True	NA	NA	False	NA	NA	NA	40948314	40936416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721_40948051_40948271
tx.84	chr1	+	1265	6	FSM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	12	137	-4	0	multi-exon	FALSE	canonical	3	180	junction_1	129.498416978741	123	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	37469262	37478068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
tx.840	chr10	-	714	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-7	1819	-2	2	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	108	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCTTGTATGCAATTAC	8579	False	NA	NA	False	NA	NA	NA	40133674	40125517	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
tx.8400	chr4	+	1373	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	146	0	146	0	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	98	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTGTAGTATCGCTTT	-10	True	NA	NA	False	NA	NA	NA	40948552	40965303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
tx.8401	chr4	+	3024	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	62	1263	62	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-24	True	NA	NA	False	NA	NA	NA	40970967	41012608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
tx.8402	chr4	+	4553	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	8	33	8	-33	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAATCATTAAACAAGG	6053	False	NA	NA	False	NA	NA	NA	40970913	41025960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
tx.8403	chr4	-	1765	6	FSM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	0	0	0	0	multi-exon	FALSE	canonical	3	1694	junction_1	130.458269189806	233	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	NA	False	NA	NA	NA	41098183	41092721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
tx.8404	chr4	+	1554	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	282	1764	282	580	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCACTTGGTTGCTATT	-7	True	NA	NA	False	NA	NA	NA	41136024	41191616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
tx.8405	chr4	+	1199	3	FSM	ENSMUSG00000036241.4	ENSMUST00000129874.2	777	3	371	-793	371	580	multi-exon	FALSE	canonical	3	428	junction_2	53	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCACTTGGTTGCTATT	NA	False	NA	NA	False	NA	NA	NA	41183290	41191616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_41183343_41189151_41189287_41190604
tx.8406	chr4	-	1070	12	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-2	-4987	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_11	290.92056795542	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCTCCACAAGCCTGC	216	False	NA	NA	False	NA	NA	NA	41275137	41211881	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41274984
tx.8407	chr4	-	2316	4	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	16543	2	16543	-2	3prime_fragment	FALSE	canonical	3	440	junction_1	72.5273894623419	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	NA	False	NA	NA	False	NA	NA	NA	41298346	41291301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285
tx.8408	chr4	-	2540	6	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	13531	2	13531	-2	3prime_fragment	FALSE	canonical	3	440	junction_1	60.3668783357231	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	NA	False	NA	NA	False	NA	NA	NA	41301358	41291301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333
tx.8409	chr4	-	2698	7	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	12152	4	12152	-4	3prime_fragment	FALSE	canonical	3	440	junction_1	56.6992553351061	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGTTTGAGTGACTA	NA	False	NA	NA	False	NA	NA	NA	41302737	41291303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613
tx.841	chr10	-	3198	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	0	6	0	-6	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	110	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGAAAGTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	40178182	40163459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
tx.8410	chr4	-	3412	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	26	4	26	-4	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGTTTGAGTGACTA	1886	False	NA	NA	False	NA	NA	NA	41314863	41291303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
tx.8411	chr4	+	2468	6	FSM	ENSMUSG00000028437.15	ENSMUST00000108060.10	2514	6	40	6	-12	-6	multi-exon	FALSE	canonical	2	3	junction_4	125.151108664686	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTATGCCATGCTGCCTT	-11	True	NA	NA	False	NA	NA	NA	41349035	41389760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41388095_41388198_41388680
tx.8412	chr4	+	2657	7	FSM	ENSMUSG00000028437.15	ENSMUST00000072866.12	3456	7	40	759	-12	0	multi-exon	FALSE	canonical	3	286	junction_5	24.6981780704569	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCTGCCTTAACCTC	-11	True	NA	NA	False	NA	NA	NA	41349035	41389766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
tx.8413	chr4	-	1711	6	NIC	ENSMUSG00000028438.17	novel	1756	7	NA	NA	-9	1	combination_of_known_junctions	TRUE	canonical	3	20	junction_4	11.0815161417561	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAGCTTGGATACATAG	-3	True	NA	NA	False	NA	NA	NA	41464857	41413546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
tx.8414	chr4	-	1575	5	ISM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	-26	22802	-18	1	5prime_fragment	FALSE	canonical	3	24	junction_4	10.280442597476	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAGCTTGGATACATAG	-12	True	NA	NA	False	NA	NA	NA	41464866	41413546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
tx.8415	chr4	+	846	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	-4	3	-4	-3	multi-exon	FALSE	canonical	3	137	junction_1	26.5	154	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGTGATGCTTTCTTG	0	True	NA	NA	False	NA	NA	NA	41465146	41480923	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_41465181_41477513_41477648_41480245
tx.8416	chr4	-	835	2	FSM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	21	0	21	0	multi-exon	FALSE	canonical	3	191	junction_1	0	250	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	-4	True	NA	NA	False	NA	NA	NA	41713513	41712032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_41712815_41713460
tx.8417	chr4	-	817	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	7	149	0	-149	multi-exon	FALSE	canonical	3	869	junction_5	34.1829229619443	462	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	-9	True	NA	NA	False	NA	NA	NA	41723163	41714946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
tx.8418	chr4	-	1608	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	29	3	-10	-3	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	588	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGTTTCCTTATGTGTC	-7	True	NA	NA	False	NA	NA	NA	41741330	41738495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
tx.8419	chr4	+	1317	11	FSM	ENSMUSG00000036073.19	ENSMUST00000084695.12	1595	11	276	2	251	-2	multi-exon	FALSE	canonical	2	236	junction_6	31.3438989278615	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCAGAGGAGTAGTGTG	11	False	NA	NA	False	NA	NA	NA	41755503	41758693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
tx.842	chr10	-	2182	5	ISM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	41522	0	4148	0	3prime_fragment	FALSE	canonical	3	189	junction_2	7.79021822544144	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGAGTTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	40717785	40707616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695
tx.8420	chr4	+	1319	11	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-251	0	combination_of_known_junctions	FALSE	canonical	2	43	junction_2	83.1877394812481	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	14	False	NA	NA	False	NA	NA	NA	41755506	41758695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
tx.8421	chr4	-	508	4	FSM	ENSMUSG00000073888.14	ENSMUST00000136768.8	556	4	48	0	-16	0	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	617	False	NA	NA	False	NA	NA	NA	41773553	41769466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464
tx.8422	chr4	-	614	6	FSM	ENSMUSG00000073888.14	ENSMUST00000108037.9	590	6	-24	0	3	0	multi-exon	FALSE	canonical	3	53	junction_3	16.7020956768904	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	4	True	NA	NA	False	NA	NA	NA	41774166	41769466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464_41773525_41773735_41773804_41774099
tx.8423	chr4	-	346	4	FSM	ENSMUSG00000073888.14	ENSMUST00000108032.3	350	4	4	0	4	0	multi-exon	FALSE	canonical	3	34	junction_1	26.6124448749494	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACTGCCTCCCTGACTT	16	False	NA	NA	False	NA	NA	NA	41774154	41773187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_41773351_41773464_41773525_41773735_41773804_41774099
tx.8424	chr4	+	2397	4	FSM	ENSMUSG00000036052.15	ENSMUST00000098112.9	3093	4	3	693	3	0	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTGCGCAGAAGCAGTA	-23	True	NA	NA	False	NA	NA	NA	42949869	42958732	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_42950005_42953140_42953386_42956525_42957128_42957317
tx.8425	chr4	-	1236	4	ISM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	17414	0	2728	0	3prime_fragment	FALSE	canonical	2	1847	junction_3	429.829682031797	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	NA	False	NA	NA	False	NA	NA	NA	42983093	42979962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840
tx.8426	chr4	-	3194	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	67	55	-7	-55	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	486	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAAAAAAGACATG	9808	False	NA	NA	False	NA	NA	NA	43000440	42980017	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
tx.8427	chr4	-	995	4	ISM	ENSMUSG00000028454.17	ENSMUST00000149333.8	2312	11	5136	2	-238	-2	3prime_fragment	FALSE	canonical	3	191	junction_2	7.31816613336672	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	5868	False	NA	NA	False	NA	NA	NA	43019944	43017636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646
tx.8428	chr4	-	995	5	NNC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	-1292	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.3946719649417	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	9444	False	NA	NA	False	NA	NA	NA	43020998	43017636	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020907
tx.8429	chr4	-	1635	5	ISM	ENSMUSG00000028454.17	ENSMUST00000149333.8	2312	11	4082	3	-1292	-3	3prime_fragment	FALSE	canonical	3	131	junction_4	29.1322415890024	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	9444	False	NA	NA	False	NA	NA	NA	43020998	43017637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266
tx.843	chr10	-	3343	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	191	0	-11	0	multi-exon	FALSE	canonical	3	163	junction_10	18.6027208894236	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGAGTTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	40759116	40707616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
tx.8430	chr4	-	3575	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-3	intron_retention	FALSE	canonical	3	84	junction_10	34.3634980757198	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	12	True	NA	NA	False	NA	NA	NA	43025800	43017637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
tx.8431	chr4	-	1164	9	ISM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	601	329	249	7	3prime_fragment	FALSE	canonical	3	2647	junction_5	244.637870126438	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTCATTGATTGGGGG	9190	False	NA	NA	False	NA	NA	NA	43031109	43028018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970
tx.8432	chr4	-	1243	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	302	329	28	7	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	1042	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTCATTGATTGGGGG	-6	True	NA	NA	False	NA	NA	NA	43031408	43028018	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
tx.8433	chr4	-	3042	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107956.8	3107	9	65	0	27	0	multi-exon	TRUE	canonical	3	38	junction_5	6.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	-16	True	NA	NA	False	NA	NA	NA	43045732	43032413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
tx.8434	chr4	+	889	5	FSM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	-24	0	3	0	multi-exon	FALSE	canonical	3	315	junction_4	11.5433963806152	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-23	True	NA	NA	False	NA	NA	NA	43493364	43495921	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508
tx.8435	chr4	+	812	6	FSM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	5	0	5	0	multi-exon	FALSE	canonical	3	301	junction_5	16.9162643630324	113	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-21	True	NA	NA	False	NA	NA	NA	43493366	43495921	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
tx.8436	chr4	-	1629	9	FSM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	30	0	-4	0	multi-exon	FALSE	canonical	3	105	junction_3	13.833270582187	54	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTGTCTAAATCACG	-18	True	NA	NA	False	NA	NA	NA	43499665	43496141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
tx.8437	chr4	-	665	2	FSM	ENSMUSG00000028465.17	ENSMUST00000123985.2	937	2	265	7	-4	-7	multi-exon	FALSE	canonical	3	68	junction_1	0	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATTATCTTCATATT	-13	True	NA	NA	False	NA	NA	NA	43562426	43559349	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_43559718_43562129
tx.8438	chr4	+	1584	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	301	-1	-180	1	multi-exon	TRUE	canonical	3	77	junction_5	10.0615294563004	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTTACTGGCACAG	-9	True	NA	NA	False	NA	NA	NA	43562632	43567061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
tx.8439	chr4	-	2119	13	ISM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	8102	0	-1129	0	3prime_fragment	FALSE	canonical	3	32	junction_8	9.28708781050335	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGGTGTGTCTGAG	8095	False	NA	NA	False	NA	NA	NA	43570771	43566927	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671
tx.844	chr10	-	3263	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	19	0	19	0	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	False	NA	NA	False	NA	NA	NA	41179237	41064167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
tx.8440	chr4	-	600	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	12	-2	-6	0	multi-exon	FALSE	canonical	3	693	junction_3	25.1433390781734	166	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATCCCTGTCTTAAA	0	True	NA	NA	False	NA	NA	NA	43656454	43654226	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
tx.8441	chr4	+	2044	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	276	0	-15	0	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	162	False	NA	NA	False	NA	NA	NA	43957676	43979118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
tx.8442	chr4	+	1726	2	ISM	ENSMUSG00000028480.15	ENSMUST00000107855.2	1816	3	12816	0	12816	0	3prime_fragment	FALSE	canonical	3	229	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	4143	False	NA	NA	False	NA	NA	NA	43970507	43979118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_43970578_43977462
tx.8443	chr4	+	1056	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	24	-1	-11	0	multi-exon	FALSE	canonical	3	1242	junction_1	75.1631558677521	717	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	-11	True	NA	NA	False	NA	NA	NA	44012666	44032846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
tx.8444	chr4	-	2812	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	108	0	-46	0	multi-exon	FALSE	canonical	3	48	junction_9	6.79693659727954	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATATCTGGTCCCAGAA	-35	True	NA	NA	False	NA	NA	NA	44072670	44036825	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
tx.8445	chr4	+	1672	2	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTACGAAATATATATTAG	NA	False	NA	NA	False	NA	NA	NA	44269128	44271059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_44269217_44269475
tx.8446	chr4	+	2537	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	39	379	39	-379	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGACTATTTGGAGTGT	-5	True	NA	NA	False	NA	NA	NA	44300914	44364296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
tx.8447	chr4	+	1468	8	ISM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	32046	376	29354	-376	3prime_fragment	FALSE	canonical	2	288	junction_2	59.1745946590361	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTATTTGGAGTGTGTT	4010	False	NA	NA	False	NA	NA	NA	44332921	44364299	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
tx.8448	chr4	+	1142	5	ISM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	46299	375	43607	-375	3prime_fragment	FALSE	canonical	3	413	junction_4	24.3361870472759	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATTTGGAGTGTGTTT	9350	False	NA	NA	False	NA	NA	NA	44347174	44364300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
tx.8449	chr4	+	2491	9	FSM	ENSMUSG00000035649.18	ENSMUST00000107824.9	2503	9	20	-8	0	-4	multi-exon	FALSE	canonical	3	29	junction_2	42.9270820694815	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTTTATTGTTACA	10	True	NA	NA	False	NA	NA	NA	44756587	44932211	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_44756693_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
tx.845	chr10	-	520	2	Antisense	novelGene_ENSMUSG00000091415.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAGCTGTTTCAG	NA	False	NA	NA	False	NA	NA	NA	41291449	41290816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_-_41291079_41291191
tx.8450	chr4	+	1242	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	5	33	-3	-33	multi-exon	FALSE	canonical	3	277	junction_3	33.5326333591622	166	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTATGACTTGGGG	-26	True	NA	NA	False	NA	NA	NA	44981399	44990701	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
tx.8451	chr4	+	1603	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	53	1330	-26	2	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCCCTCCTTTCATGT	-12	True	NA	NA	False	NA	NA	NA	45018635	45032362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
tx.8452	chr4	-	637	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	1	1	1	-1	multi-exon	FALSE	canonical	3	2176	junction_1	0	969	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTTTTGTGTTTTTAA	-15	True	NA	NA	False	NA	NA	NA	45108113	45105208	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_45105645_45107912
tx.8453	chr4	+	1387	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	31	646	3	343	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGCCGATTTCCACC	-5	True	NA	NA	False	NA	NA	NA	45297157	45315485	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
tx.8454	chr4	-	1051	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	10	16	10	-16	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	358	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTGGTAGTGTCTATA	-12	True	NA	NA	False	NA	NA	NA	45320619	45316628	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
tx.8455	chr4	-	1934	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	0	2499	0	819	multi-exon	FALSE	canonical	3	68	junction_2	5.5	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	-17	True	NA	NA	False	NA	NA	NA	45408761	45398421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_45400180_45404726_45404836_45408694
tx.8456	chr4	+	2286	2	FSM	ENSMUSG00000035561.6	ENSMUST00000044384.5	2298	2	12	0	12	0	multi-exon	FALSE	canonical	3	42	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATCACTGTTTTCCTT	-3	True	NA	NA	False	NA	NA	NA	45799033	45804604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_45799170_45802454
tx.8457	chr4	-	1909	6	FSM	ENSMUSG00000035495.16	ENSMUST00000160008.2	1547	6	-49	-313	-7	313	multi-exon	FALSE	canonical	3	160	junction_5	18.8722017793367	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGATTGAGTAAGA	-31	True	NA	NA	False	NA	NA	NA	46138462	46123091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
tx.8458	chr4	-	571	2	ISM	ENSMUSG00000035495.16	ENSMUST00000160008.2	1547	6	-42	11695	0	402	5prime_fragment	FALSE	canonical	3	160	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAGAAAAAAAGA	-24	True	NA	NA	False	NA	NA	NA	46138455	46135099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_46135595_46138379
tx.8459	chr4	+	2876	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	134	0	134	0	multi-exon	TRUE	canonical	3	296	junction_19	36.3529529761015	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	-7	True	NA	NA	False	NA	NA	NA	46138746	46172403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
tx.846	chr10	+	1267	2	FSM	ENSMUSG00000019826.12	ENSMUST00000216656.2	2476	2	-76	1285	-24	-1285	multi-exon	FALSE	canonical	3	104	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGTTGTCACCTCACA	NA	False	NA	NA	False	NA	NA	NA	41326354	41328179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_41326527_41327084
tx.8460	chr4	-	1518	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	1	8	1	-8	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTCTCTGTCTGAG	-13	True	NA	NA	False	NA	NA	NA	46389436	46379871	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
tx.8461	chr4	+	710	4	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	17812	130	17812	-130	3prime_fragment	FALSE	canonical	3	5793	junction_2	213.552491595548	276	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTCATGCTTTTCTT	-9	True	NA	-43	True	NA	NA	NA	46468713	46472527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_46468788_46469882_46470008_46471397_46471468_46472086
tx.8462	chr4	+	605	3	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	19012	130	19012	-130	3prime_fragment	FALSE	canonical	3	5793	junction_1	2	317	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTCATGCTTTTCTT	-15	True	NA	NA	False	NA	NA	NA	46469913	46472527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_46470008_46471397_46471468_46472086
tx.8463	chr4	+	1161	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	60	958	-11	-958	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	320	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTGCTGTCCAGT	-8	True	NA	NA	False	NA	NA	NA	46489307	46502674	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
tx.8464	chr4	+	1021	6	NNC	ENSMUSG00000028334.11	novel	2179	6	NA	NA	-11	-957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	361.736146935857	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTGCTGTCCAGTG	-8	True	NA	NA	False	NA	NA	NA	46489307	46502675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500914_46502509
tx.8465	chr4	+	486	2	ISM	ENSMUSG00000007613.16	ENSMUST00000044234.14	2861	9	-88	28077	-3	22743	5prime_fragment	FALSE	canonical	3	200	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCTTCTAGACTGCC	NA	False	NA	NA	False	NA	NA	NA	47353218	47384056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_47353397_47383748
tx.8466	chr4	-	3013	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	8	0	8	0	multi-exon	FALSE	canonical	3	118	junction_1	0	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCAGTTTATGGTTGCG	-9	True	NA	NA	False	NA	NA	NA	47474325	47469832	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_47472459_47473938
tx.8467	chr4	+	558	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	4	2	4	-2	multi-exon	FALSE	canonical	3	2329	junction_2	60.4225859169308	943	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTTGCCTGTGCTTTA	-18	True	NA	NA	False	NA	NA	NA	47474661	47483240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
tx.8468	chr4	+	2465	8	NIC	ENSMUSG00000061455.14	novel	5770	8	NA	NA	15	887	intron_retention	FALSE	canonical	2	7	junction_1	13.490737563232	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTATTTCTTATC	0	True	NA	NA	False	NA	NA	NA	48124949	48183118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_48125067_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
tx.8469	chr4	+	2386	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	-5	3389	-2	887	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTATTTCTTATC	0	True	NA	NA	False	NA	NA	NA	48124920	48183118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
tx.847	chr10	+	2850	7	FSM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	0	-6	0	6	multi-exon	FALSE	canonical	3	58	junction_6	14.3807355707403	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGATCTTTATCAAAAA	NA	False	NA	NA	False	NA	NA	NA	41326378	41341576	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
tx.8470	chr4	-	1625	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-42	1041	-42	126	multi-exon	TRUE	canonical	3	625	junction_9	43.7020339182862	170	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCTGGACAGTCTTTA	-22	True	NA	NA	False	NA	NA	NA	48279600	48194363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
tx.8471	chr4	-	1091	7	ISM	ENSMUSG00000028345.16	ENSMUST00000155905.8	2547	13	12023	0	2402	0	3prime_fragment	FALSE	canonical	3	747	junction_6	46.2024530373298	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	NA	False	NA	NA	False	NA	NA	NA	48456901	48430857	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733
tx.8472	chr4	-	3095	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	7	0	7	0	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	-22	True	NA	NA	False	NA	NA	NA	48473452	48430857	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
tx.8473	chr4	+	595	2	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTGTCTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	48513713	48519022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_48514080_48518793
tx.8474	chr4	+	600	3	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	1.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTGTCTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	48513795	48519022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_48514080_48514498_48514586_48518793
tx.8475	chr4	+	1798	4	NNC	ENSMUSG00000039693.12	novel	1378	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	134.650164005346	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	-4	True	NA	NA	False	NA	NA	NA	48540072	48561918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_48540272_48549924_48549998_48552379_48552831_48560843
tx.8476	chr4	+	1688	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	31	-341	31	0	multi-exon	FALSE	canonical	3	126	junction_1	89	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	33	False	NA	NA	False	NA	NA	NA	48540109	48561918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_48540272_48552379_48552831_48560843
tx.8477	chr4	+	1420	3	ISM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	65118	-3	13358	3	3prime_fragment	FALSE	canonical	3	504	junction_2	25.5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTGTGTGCTCATTT	NA	False	NA	NA	False	NA	NA	NA	48650291	48663134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_48650419_48658773_48658933_48662000
tx.8478	chr4	-	2099	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	15	0	15	0	multi-exon	FALSE	canonical	3	1281	junction_1	0	466	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTTTAAAGTGTTATT	-16	True	NA	NA	False	NA	NA	NA	49521078	49512595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_49514578_49520961
tx.8479	chr4	+	2962	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	40	-37	40	37	multi-exon	FALSE	canonical	3	41	junction_2	6.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGATGTTTTGGTATTG	1	True	NA	NA	False	NA	NA	NA	49521256	49531554	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_49521596_49522397_49522483_49529016
tx.848	chr10	+	3541	24	FSM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	22	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	27.5095446574272	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9115	False	NA	NA	False	NA	NA	NA	41352331	41363026	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
tx.8480	chr4	+	2094	8	ISM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	18103	2	-94	-1	3prime_fragment	FALSE	canonical	3	79	junction_6	9.437225465665	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTGTGGTGTT	67	False	NA	39	True	NA	NA	NA	49650168	49656885	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
tx.8481	chr4	+	2750	2	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGCG	NA	False	NA	NA	False	NA	NA	NA	51871716	51879785	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_51871937_51877255
tx.8482	chr4	+	1030	8	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	13	37257	4	-325	5prime_fragment	FALSE	canonical	3	347	junction_1	45.1758468969553	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCTCTCAATTGTGAA	-6	True	NA	NA	False	NA	NA	NA	52439255	52451003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819
tx.8483	chr4	+	1508	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	44	0	-26	0	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	216	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	-24	True	NA	NA	False	NA	NA	NA	53011923	53022060	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
tx.8484	chr4	+	281	2	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCAGAGTAAAAGCTAGAA	0	True	NA	NA	False	NA	NA	NA	53341419	53342757	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_53341538_53342594
tx.8485	chr4	+	2791	4	ISM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	112902	0	17961	0	3prime_fragment	FALSE	canonical	3	334	junction_3	24.9443825784929	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTATGTGTGTAACCAT	NA	False	NA	NA	False	NA	NA	NA	53553572	53567818	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_53553624_53560914_53561152_53563140_53563222_53565396
tx.8486	chr4	+	726	4	FSM	ENSMUSG00000054752.17	ENSMUST00000107643.8	2350	4	-92	1716	-73	-1716	multi-exon	FALSE	canonical	3	14	junction_1	1.69967317119759	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTTGGGGTCAGGAA	-29	True	NA	NA	False	NA	NA	NA	53631397	53650074	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_53631613_53646986_53647083_53647669_53647802_53649791
tx.8487	chr4	+	1456	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	-18	1424	-18	-1424	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTATACAGTTATTTATT	-34	True	NA	NA	False	NA	NA	NA	53826026	53860595	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
tx.8488	chr4	+	2603	10	NIC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	3	-1027	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	367.852963110447	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGGCTTTTATTTGG	-15	True	NA	NA	False	NA	NA	NA	55350045	55391210	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_55350251_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
tx.8489	chr4	+	2771	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	7	1032	0	-1032	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTGTTGGCTTTTA	-11	True	NA	NA	False	NA	NA	NA	55350049	55391205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
tx.849	chr10	-	1637	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	-35	0	-6	0	multi-exon	FALSE	canonical	3	150	junction_9	17.8020667408847	64	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTACCTTGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	41366371	41363167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
tx.8490	chr4	+	1438	2	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	35445	1030	35398	-1030	3prime_fragment	FALSE	canonical	3	1164	junction_1	0	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGTTGGCTTTTATT	7155	False	NA	NA	False	NA	NA	NA	55385487	55391207	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_55385602_55389883
tx.8491	chr4	-	2377	3	ISM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	1414	0	718	0	3prime_fragment	FALSE	canonical	3	1140	junction_2	58	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	2274	False	NA	NA	False	NA	NA	NA	55531052	55527142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_55528301_55529717_55529883_55529998
tx.8492	chr4	-	5008	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	57	1095	57	237	multi-exon	TRUE	canonical	3	245	junction_24	36.3764927995411	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTTATGTGCTACTAGC	19	True	NA	NA	False	NA	NA	NA	56802274	56750774	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
tx.8493	chr4	-	1646	14	ISM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	22	31510	22	-4724	5prime_fragment	FALSE	canonical	3	245	junction_1	27.3257794921219	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGTAAACGC	-16	True	NA	NA	False	NA	NA	NA	56802309	56781189	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
tx.8494	chr4	+	2442	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	0	1833	0	1821	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGATTCTCTGTGAGT	0	True	NA	NA	False	NA	NA	NA	56802348	56807768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
tx.8495	chr4	-	1807	5	FSM	ENSMUSG00000038816.15	ENSMUST00000131231.2	654	5	52	-1205	52	0	multi-exon	FALSE	canonical	3	19	junction_4	112.62548557054	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	NA	False	NA	NA	False	NA	NA	NA	56814267	56810934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56814169
tx.8496	chr4	-	3684	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-20	0	-20	0	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	9409	False	NA	NA	False	NA	NA	NA	56865208	56810934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
tx.8497	chr4	-	3378	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCATACCGACTGGCTT	-6	True	NA	NA	False	NA	NA	NA	56846082	56810937	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
tx.8498	chr4	-	1674	10	NIC	ENSMUSG00000038816.15	novel	1956	12	NA	NA	8	22	combination_of_known_junctions	FALSE	canonical	3	86	junction_9	65.1103526690753	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTCAGCCTTTTGTTTC	-8	True	NA	NA	False	NA	NA	NA	56846084	56825980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
tx.8499	chr4	-	1963	11	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-26	15064	-26	4	5prime_fragment	FALSE	canonical	3	197	junction_7	32.0661815625122	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATTTCCTACTGAAATC	9403	False	NA	NA	False	NA	NA	NA	56865214	56825998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
tx.85	chr1	+	1494	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	65	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCCTTTTCCTTAAGG	NA	False	NA	NA	False	NA	NA	NA	37911277	37915309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_37911407_37913944
tx.850	chr10	+	2888	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	28	6	28	-6	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	74	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGTCATATTTTGA	NA	False	NA	NA	False	NA	NA	NA	41395437	41407038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
tx.8501	chr4	-	555	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	112	384	112	-384	multi-exon	TRUE	canonical	3	4612	junction_4	90.890043459116	4869	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	136	False	NA	NA	False	NA	NA	NA	57956299	57943756	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
tx.8502	chr4	-	3368	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	84	-5	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	NA	False	NA	NA	False	NA	NA	NA	58553814	58435259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
tx.8503	chr4	-	2671	2	ISM	ENSMUSG00000038668.15	ENSMUST00000107570.2	3244	3	12628	8	12628	-8	3prime_fragment	FALSE	canonical	3	250	junction_1	0	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCGATGTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	58486775	58435262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_58437635_58486476
tx.8504	chr4	-	1719	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	101	1692	55	-1692	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATGCCTGACAGCATG	502	False	58553269	NA	False	NA	NA	NA	58553256	58436946	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
tx.8505	chr4	-	1178	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	38	1080	38	-1080	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGTGATAGAGAATGAA	-4	True	NA	NA	False	NA	NA	NA	58987081	58966518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
tx.8506	chr4	+	564	2	ISM	ENSMUSG00000070972.14	ENSMUST00000153467.3	2393	5	17201	752	17201	305	3prime_fragment	FALSE	canonical	3	112	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTGAAGTGTTTCT	2704	False	NA	NA	False	NA	NA	NA	59020393	59022988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_59020530_59022560
tx.8507	chr4	+	1059	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	128	5	128	-5	multi-exon	FALSE	canonical	3	257	junction_2	16.5	50	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTAGTTTGTGTTTGG	4	True	NA	NA	False	NA	NA	NA	59035215	59041898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_59035319_59039226_59039359_59041074
tx.8508	chr4	-	3459	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	70	3326	1	65	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTGTCCACCCCTTC	-5	True	NA	NA	False	NA	NA	NA	59549294	59475193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
tx.8509	chr4	+	2585	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	27	-1	27	1	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGCCTTTTATTTCT	-5	True	NA	NA	False	NA	NA	NA	59581589	59618690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
tx.851	chr10	-	1546	6	ISM	ENSMUSG00000019813.17	ENSMUST00000190022.7	1949	10	80230	-5	-6466	0	3prime_fragment	FALSE	canonical	3	114	junction_4	44.0227214061103	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	1080	False	NA	NA	False	NA	NA	NA	41605373	41594836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326
tx.8510	chr4	-	3148	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-55	-1655	3	-5	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAGTTTACTGCATAT	-25	True	NA	NA	False	NA	NA	NA	59783863	59769641	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
tx.8511	chr4	-	3209	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	2	26	2	-26	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAACAAACAAACAAAAAA	-26	True	NA	NA	False	NA	NA	NA	59783864	59769662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
tx.8512	chr4	-	1679	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-29	4	-1	-4	multi-exon	FALSE	canonical	3	236	junction_2	17	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCCCCTTATATAATTA	-29	True	NA	NA	False	NA	NA	NA	59783867	59774091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_59775550_59782253_59782335_59783727
tx.8513	chr4	+	910	2	ISM	ENSMUSG00000028385.15	ENSMUST00000145199.8	2303	6	9874	826	9788	-826	3prime_fragment	FALSE	canonical	3	102	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTAGTGTATGTGTTTT	3774	False	NA	NA	False	NA	NA	NA	59894567	59899707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_59894678_59898907
tx.8514	chr4	+	871	7	FSM	ENSMUSG00000078689.9	ENSMUST00000107521.8	642	7	-75	-154	-75	0	multi-exon	FALSE	canonical	3	12	junction_2	4.92442890089805	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTCTCTGTGTCCAGA	-11	True	NA	NA	False	NA	NA	NA	59964218	60007274	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_59964368_60003977_60004112_60004813_60004888_60005471_60005583_60005921_60006024_60006188_60006235_60007019
tx.8515	chr4	-	3582	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222050.2	2017	4	-116	-1449	-100	0	multi-exon	FALSE	canonical	3	19	junction_3	8.48528137423857	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	62126783	62107776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_62110927_62122755_62122888_62123260_62123343_62126565
tx.8516	chr4	+	1649	3	NIC	ENSMUSG00000066152.12	novel	1820	4	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	50	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	NA	False	NA	NA	NA	62204666	62216648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_62204812_62210868_62210936_62215211
tx.8517	chr4	+	1835	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	NA	False	NA	NA	NA	62204670	62216648	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
tx.8518	chr4	+	1497	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	-21	2242	-21	-2242	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	231	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTACCTTGGTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	62278942	62307764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
tx.8519	chr4	-	1486	3	FSM	ENSMUSG00000066149.12	ENSMUST00000107459.2	654	3	-3	-829	-3	778	multi-exon	FALSE	canonical	3	31	junction_2	175	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGACTCTTTATTATTG	2678	False	NA	NA	False	NA	NA	NA	62326865	62312041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_62313259_62320960_62321153_62326788
tx.852	chr10	-	2125	10	ISM	ENSMUSG00000019813.17	ENSMUST00000189770.7	2232	11	231	0	-7	0	3prime_fragment	FALSE	canonical	3	43	junction_4	55.5797724996344	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	360	False	NA	NA	False	NA	NA	NA	41685633	41594836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
tx.8520	chr4	-	1571	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	-769	0	769	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	262	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGTACATAAGACTCT	2681	False	NA	NA	False	NA	NA	NA	62326862	62312050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
tx.8521	chr4	+	2721	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	0	2502	0	1157	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAATTTATGTTTGGGTG	NA	False	NA	NA	False	NA	NA	NA	62327033	62342725	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
tx.8522	chr4	-	1354	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-12	98	-3	-98	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGGCTTTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	62389136	62371968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
tx.8523	chr4	-	1453	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	-6	1102	3	-100	multi-exon	FALSE	canonical	3	20	junction_10	54.6457683631587	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	62389130	62371970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
tx.8524	chr4	-	2250	10	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	-3	-41	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	61.169063430689	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGGGATAACATTTGAA	NA	False	NA	NA	False	NA	NA	NA	62389136	62370909	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
tx.8525	chr4	-	1199	2	FSM	ENSMUSG00000038422.3	ENSMUST00000037820.3	1205	2	7	-1	7	1	multi-exon	FALSE	canonical	3	14	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGTTCCTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	62420506	62417243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_62418331_62420394
tx.8526	chr4	-	1223	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-16	-1	-16	1	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCCCTCTTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	62438171	62427404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
tx.8527	chr4	-	1781	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	21	3	-9	-3	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	233	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACTCATACAATGTGC	NA	False	NA	NA	False	NA	NA	NA	62443284	62440888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
tx.8528	chr4	+	571	5	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-92	-16510	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	32.2286751201473	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTGTTCTGGCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	62501745	62525643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525482
tx.8529	chr4	+	1243	4	ISM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-120	50033	-120	-16510	5prime_fragment	FALSE	canonical	3	86	junction_2	7.25718035235908	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTGTTCTGGCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	62501717	62525643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743
tx.853	chr10	-	2205	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	-23	-5	0	0	multi-exon	FALSE	canonical	3	114	junction_4	38.3583107031579	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	367	False	NA	NA	False	NA	NA	NA	41685626	41594836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
tx.8530	chr4	+	2648	7	NIC	ENSMUSG00000059810.19	novel	496	2	NA	NA	4	1	combination_of_known_junctions	TRUE	canonical	2	7	junction_1	17.9071680247511	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTGTATTCCTGGTC	NA	False	NA	NA	False	NA	NA	NA	62581862	62621256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_62582030_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
tx.8531	chr4	+	1030	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	56	49	56	-49	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	2115	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTGGCTCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	63463064	63468938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_63463237_63466821_63466923_63468181
tx.8532	chr4	+	3150	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	-20	635	-20	-631	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCGTGGAGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	63476997	63503959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
tx.8533	chr4	+	3171	2	FSM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	23	0	23	0	multi-exon	FALSE	canonical	3	75	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	NA	False	NA	NA	NA	65523245	65534475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_65523307_65531365
tx.8534	chr4	+	3168	2	FSM	ENSMUSG00000051675.14	ENSMUST00000107366.2	3191	2	23	0	23	0	multi-exon	FALSE	canonical	3	41	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	NA	False	NA	NA	NA	65523245	65534475	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_65523307_65531368
tx.8535	chr4	-	891	2	Genic_Genomic	ENSMUSG00000046341.6	novel	450	1	NA	NA	-92	451	multi-exon	FALSE	canonical	2	29	junction_1	0	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTATAAGGGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	69844408	69843415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr4_-_69844194_69844295
tx.8536	chr4	+	4198	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	-1	-1	-1	1	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	74170171	74324098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
tx.8537	chr4	-	741	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	0	256	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAGTTCTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	75196542	75195590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_75196007_75196217
tx.8538	chr4	+	661	2	Antisense	novelGene_ENSMUSG00000028399.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAATGTTTAGCATTTC	NA	False	NA	NA	False	NA	NA	NA	77228972	77232614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr4_+_77229411_77232391
tx.8539	chr4	-	2600	9	FSM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	-57	5886	-55	-14	multi-exon	FALSE	canonical	3	11	junction_1	6.11861912526021	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAAGAAAAATAGGG	NA	False	NA	NA	False	NA	NA	NA	82423602	82214298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
tx.854	chr10	-	1442	5	ISM	ENSMUSG00000019813.17	ENSMUST00000105505.10	2071	9	16571	1	-6449	0	3prime_fragment	FALSE	canonical	3	43	junction_4	75.4730912312461	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	1097	False	NA	NA	False	NA	NA	NA	41605356	41594836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326
tx.8540	chr4	-	4832	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	116	3815	-3	1494	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAATTTGTCTTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	82777794	82720789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
tx.8541	chr4	-	3251	8	ISM	ENSMUSG00000028403.16	ENSMUST00000107239.8	1148	9	5842	-2142	-3302	-20	3prime_fragment	FALSE	canonical	3	62	junction_1	13.5736840231082	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTATTGTTGGTGATGT	NA	False	NA	NA	False	NA	NA	NA	82772353	82722303	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205
tx.8542	chr4	-	2724	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-10	6117	-10	2	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTGCTGAAGCCTGAA	NA	False	NA	NA	False	NA	NA	NA	83242502	83144653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
tx.8543	chr4	-	1278	5	ISM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	84059	6120	-7026	-1	3prime_fragment	FALSE	canonical	3	157	junction_3	8.73212459828649	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTAGTGCTGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	83158433	83144656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304
tx.8544	chr4	-	1823	16	FSM	ENSMUSG00000038172.15	ENSMUST00000048274.11	1804	16	-21	2	-5	-2	multi-exon	FALSE	canonical	3	169	junction_7	23.0820757780192	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACAAATTCAATTTTCC	NA	False	NA	NA	False	NA	NA	NA	83242497	83158048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
tx.8545	chr4	-	919	7	FSM	ENSMUSG00000038172.15	ENSMUST00000030205.14	842	7	-73	-4	-7	4	multi-exon	FALSE	canonical	2	10	junction_1	86.0905531015647	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTATTTTTTTTTGAAG	NA	False	NA	NA	False	NA	NA	NA	83242499	83177430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_83177704_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
tx.8546	chr4	+	947	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	-7	2	0	-2	multi-exon	FALSE	canonical	3	396	junction_3	22.8875512014719	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTTTCTAGTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	83335960	83360321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
tx.8547	chr4	+	1398	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	7	0	0	0	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATTCTTTTCTCCAA	NA	False	NA	NA	False	NA	NA	NA	83335967	83371577	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
tx.8548	chr4	-	1989	7	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	22831	0	1336	0	3prime_fragment	FALSE	canonical	3	958	junction_5	83.2986594529988	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	8136	False	NA	19	True	NA	NA	NA	83381865	83373916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831
tx.8549	chr4	+	2794	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	28	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTTCTGCTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	85123705	85307617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
tx.855	chr10	+	3548	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	261	0	261	0	multi-exon	FALSE	canonical	3	40	junction_1	18.7662686623146	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	253	False	NA	NA	False	NA	NA	NA	41686191	41784420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
tx.8550	chr4	-	3944	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	29	2185	-7	-2185	multi-exon	TRUE	canonical	3	127	junction_2	24.1993672437938	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGAGGCACTAACGGT	NA	False	NA	NA	False	NA	NA	NA	86530263	86499276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
tx.8551	chr4	-	1706	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	43	139	-31	-139	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	297	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTCCTGTGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	86588254	86574940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
tx.8552	chr4	-	1211	4	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	7934	139	-2978	-139	3prime_fragment	FALSE	canonical	3	453	junction_2	79.0119540885358	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTCCTGTGTGGTCTG	1435	False	NA	NA	False	NA	NA	NA	86580363	86574940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170
tx.8553	chr4	-	846	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	30	2	-28	-2	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	3901	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	NA	NA	NA	86775619	86772898	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
tx.8554	chr4	+	706	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	35	2202	35	129	multi-exon	FALSE	canonical	3	467	junction_1	0	371	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTGTGGTTCAAGA	4155	False	NA	NA	False	NA	NA	NA	86848962	86850857	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_86849080_86850268
tx.8555	chr4	+	1743	11	ISM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	-5	213785	-4	14177	5prime_fragment	FALSE	canonical	3	105	junction_5	16.9292646030476	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAATTCAGTATATTTT	NA	False	NA	NA	False	NA	NA	NA	88012861	88115458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995
tx.8556	chr4	+	1880	12	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	15573	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.8130696903705	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	88279176	88329248	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_88279274_88286909_88287013_88288991_88289077_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
tx.8557	chr4	+	1781	10	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-23958	-4	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	38.3289852606498	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTGCAATGTGACTTT	NA	False	NA	NA	False	NA	NA	NA	88294628	88329237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_88294826_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
tx.8558	chr4	-	1065	7	FSM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	3	1021	3	-1021	multi-exon	TRUE	canonical	2	3	junction_1	2.26691175145591	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTAACTTCTGCACTCG	NA	False	NA	NA	False	NA	NA	NA	88357160	88332187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696_88355801_88357069
tx.8559	chr4	+	2539	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	258	0	258	0	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	404	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAGATTATACTTGA	5306	False	NA	NA	False	NA	NA	NA	89055616	89099318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
tx.856	chr10	+	2601	10	FSM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	34	junction_1	20.085619202938	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	NA	False	NA	NA	False	NA	NA	NA	41763433	41784420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
tx.8560	chr4	-	934	3	FSM	ENSMUSG00000044303.7	ENSMUST00000107131.2	895	3	31	-70	31	0	multi-exon	FALSE	canonical	2	3	junction_2	1	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTTTTAGCATAGAAAT	NA	False	NA	NA	False	NA	NA	NA	89212859	89192707	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_89193012_89194881_89195223_89212570
tx.8561	chr4	-	1380	2	FSM	ENSMUSG00000073802.6	ENSMUST00000097981.6	1390	2	9	1	9	-1	multi-exon	FALSE	canonical	3	16	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAAGTTCAACTTGGTT	NA	False	NA	NA	False	NA	NA	NA	89229267	89224536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_89225552_89228902
tx.8562	chr4	-	3671	6	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.2082863444267	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	91260277	91139002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
tx.8563	chr4	-	2756	6	NNC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	487	-901	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	35.1112517578055	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTATAACCATAGGTTT	NA	False	NA	NA	False	NA	NA	NA	91259706	91139906	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259576
tx.8564	chr4	-	1667	6	NNC	ENSMUSG00000087128.8	novel	925	5	NA	NA	-12	654	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	5.5281099844341	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGCAAGCGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	94365429	94348513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_94349593_94350122_94350199_94352666_94352793_94353653_94353778_94356020_94356103_94365249
tx.8565	chr4	-	1591	5	FSM	ENSMUSG00000087128.8	ENSMUST00000133884.8	925	5	-12	-654	-12	654	multi-exon	FALSE	canonical	1	1	junction_1	7.28010988928052	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGCAAGCGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	94365429	94348513	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_94349593_94352666_94352793_94353653_94353778_94356020_94356103_94365249
tx.8566	chr4	-	1750	6	NNC	ENSMUSG00000087128.8	novel	925	5	NA	NA	-5	651	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	4.63033476111609	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTGCAAGCGTTT	NA	False	NA	NA	False	NA	NA	NA	94365422	94348516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_94349593_94350122_94350292_94352666_94352793_94353653_94353778_94356020_94356103_94365249
tx.8567	chr4	-	2685	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	99	0	-10	0	multi-exon	TRUE	canonical	3	626	junction_12	53.7532164993284	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	94491382	94457403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
tx.8568	chr4	-	1673	8	ISM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	19265	0	-481	0	3prime_fragment	FALSE	canonical	3	672	junction_2	48.365951930283	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	4971	False	NA	NA	False	NA	NA	NA	94472216	94457403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069
tx.8569	chr4	+	2134	20	FSM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	9	-4	9	4	multi-exon	FALSE	canonical	3	154	junction_8	18.5526129152575	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTTCCTGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	94502736	94581470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
tx.8570	chr4	+	2210	9	NNC	ENSMUSG00000028576.13	novel	1713	14	NA	NA	6	-24830	intron_retention	FALSE	canonical	3	12	junction_8	62.4234531246069	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTATTGTTGTAATCTG	NA	False	NA	NA	False	NA	NA	NA	94502733	94528105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94526652
tx.8571	chr4	+	1666	6	ISM	ENSMUSG00000028576.13	ENSMUST00000107104.3	1713	14	36	36325	36	-36325	5prime_fragment	FALSE	canonical	3	184	junction_4	9.62081077664455	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCAGTTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	94502763	94516610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488
tx.8572	chr4	-	2572	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	10	4838	10	147	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATAAAACTCTAAACTTT	NA	False	NA	NA	False	NA	NA	NA	94867327	94835114	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
tx.8573	chr4	-	2030	13	ISM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	13234	4861	4785	124	3prime_fragment	FALSE	canonical	3	31	junction_8	10.8099105762567	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATTATGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	94854103	94835137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365
tx.8574	chr4	-	1299	3	FSM	ENSMUSG00000062627.10	ENSMUST00000136130.2	704	3	-16	-579	9	579	multi-exon	FALSE	canonical	3	64	junction_1	6	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTTTATAGTATATCT	NA	False	NA	NA	False	NA	NA	NA	94867328	94860090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_94861226_94863453_94863530_94867240
tx.8575	chr4	+	1107	2	ISM	ENSMUSG00000028573.19	ENSMUST00000176162.8	3037	13	-6	254403	-2	-11399	5prime_fragment	FALSE	canonical	3	27	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTCCATCCCCCAAAAG	NA	False	NA	NA	False	NA	NA	NA	95445741	95474488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_95445829_95473468
tx.8576	chr4	+	1891	16	FSM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	4.66476151587624	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCACTTATGTCTGT	NA	False	NA	NA	False	NA	NA	NA	95445743	95815176	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
tx.8577	chr4	-	1960	9	FSM	ENSMUSG00000052914.5	ENSMUST00000030303.6	3605	9	58	1587	58	-1587	multi-exon	FALSE	canonical	1	1	junction_1	1.40867845869808	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTTATTTAAAAAGTAAAT	NA	False	NA	NA	False	NA	NA	NA	96441840	96405961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_96406443_96411939_96412079_96414075_96414264_96417621_96417761_96419868_96420046_96423682_96423844_96424232_96424383_96433935_96434099_96441478
tx.8578	chr4	+	3149	4	ISM	ENSMUSG00000087166.10	ENSMUST00000154279.3	2942	5	-9	0	5	0	intron_retention	FALSE	canonical	3	363	junction_2	40.8765077873452	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	NA	False	NA	NA	NA	98614975	98626717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682
tx.8579	chr4	+	1068	3	ISM	ENSMUSG00000087166.10	ENSMUST00000154279.3	2942	5	4	4435	4	401	5prime_fragment	FALSE	canonical	3	363	junction_2	35	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGAAGAAGAAACGAGCT	NA	False	NA	NA	False	NA	NA	NA	98614988	98622282	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_98615078_98615631_98615708_98621379
tx.8580	chr4	+	3060	3	NIC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	4	0	intron_retention	FALSE	canonical	2	9	junction_1	225.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	NA	False	NA	NA	NA	98614988	98626717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_98615078_98621379_98622316_98624682
tx.8581	chr4	+	3115	4	NIC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	192	junction_2	120.477752671972	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	NA	False	NA	NA	NA	98615029	98626717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682
tx.8582	chr4	+	1884	3	FSM	ENSMUSG00000085843.2	ENSMUST00000133455.2	2251	3	-11	378	-11	-378	multi-exon	FALSE	canonical	3	22	junction_2	4	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTTTTCAACCCTACAC	NA	False	NA	NA	False	NA	NA	NA	98681993	98686759	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_98682120_98684245_98684324_98685079
tx.8583	chr4	+	2812	11	FSM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	-16	-4	-16	0	multi-exon	FALSE	canonical	3	50	junction_1	10.6155546251715	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTTTTGTTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	99082367	99148024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_99082521_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
tx.8584	chr4	+	2931	11	FSM	ENSMUSG00000028550.16	ENSMUST00000030279.15	3178	11	247	0	34	0	multi-exon	FALSE	canonical	3	33	junction_1	14.1265707091282	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTTTTGTTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	99082417	99148024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_99082690_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
tx.8585	chr4	+	1653	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-12	-1287	-12	1287	multi-exon	TRUE	canonical	3	84	junction_1	0	40	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGAATTCCATCAATCG	NA	False	NA	NA	False	NA	NA	NA	99457724	99462535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_99457876_99461033
tx.8586	chr4	+	712	2	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTCTCTCTCTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	99538540	99540129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_99538782_99539658
tx.8587	chr4	+	767	2	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAACATTAAATTAGCCT	NA	False	NA	NA	False	NA	NA	NA	99538672	99540238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_99538860_99539658
tx.8588	chr4	+	1272	3	Antisense	novelGene_ENSMUSG00000086592.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGCTTTGGATTTAATG	NA	False	NA	NA	False	NA	NA	NA	99551074	99555204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr4_+_99551790_99554075_99554234_99554805
tx.8589	chr4	+	2843	13	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	56.4121736270934	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	NA	False	NA	NA	NA	99603884	99651695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
tx.859	chr10	+	1218	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	183	0	-76	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	424	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	NA	False	NA	NA	NA	42378209	42411366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
tx.8590	chr4	+	3114	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	-37	2	-36	-2	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	NA	False	NA	NA	NA	99603864	99651695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
tx.8591	chr4	+	1686	4	ISM	ENSMUSG00000073792.12	ENSMUST00000144805.8	3947	14	1	22831	1	7	intron_retention	FALSE	canonical	3	166	junction_1	24.8506650928211	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	99603902	99627717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360
tx.8592	chr4	-	788	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	35	1983	-17	-54	multi-exon	FALSE	canonical	3	74	junction_5	47.6377935572167	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATATGCCTGTATG	NA	False	NA	NA	False	NA	NA	NA	99717388	99655621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
tx.8593	chr4	-	659	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	-24	-54	combination_of_known_splicesites	FALSE	canonical	3	12	junction_6	80.1386553520375	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATATGCCTGTATG	NA	False	NA	NA	False	NA	NA	NA	99717395	99655621	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99702294_99702338_99717319
tx.8594	chr4	+	2178	14	FSM	ENSMUSG00000073791.14	ENSMUST00000136874.4	2121	14	-57	0	-2	0	multi-exon	FALSE	canonical	3	6	junction_1	5.10481846862679	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGTCTTGTTAATTG	2018	False	NA	NA	False	NA	NA	NA	99717679	99769985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_99717792_99719629_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
tx.8595	chr4	+	2321	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	48	2	48	-2	multi-exon	TRUE	canonical	3	174	junction_5	14.102836594104	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTTGTCGCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	99786658	99844489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
tx.8596	chr4	-	4868	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	40	-2	-16	2	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATGCCTTTTAATATT	NA	False	NA	NA	False	NA	NA	NA	101122439	101009561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
tx.8597	chr4	-	1744	5	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	108213	0	-1950	0	3prime_fragment	FALSE	canonical	3	187	junction_4	10.1242283656583	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	101014266	101009563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148
tx.8598	chr4	+	1638	5	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	414	2450	0	766	3prime_fragment	FALSE	canonical	3	206	junction_2	35.8355619462009	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTCAGTGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	101276929	101321742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
tx.8599	chr4	+	1891	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	7	0	7	0	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	389	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	8222	False	NA	NA	False	NA	NA	NA	101504921	101516561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
tx.86	chr1	-	1294	8	NNC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	91.7463228424008	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	NA	False	NA	NA	NA	37929463	37917968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_-_37918445_37918640_37918702_37919077_37919170_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
tx.860	chr10	-	1047	2	Antisense	novelGene_ENSMUSG00000038280.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTATGTTAATTGTTA	NA	False	NA	NA	False	NA	NA	NA	42516005	42512479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_-_42513429_42515907
tx.8600	chr4	+	1792	3	ISM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	4679	0	4604	0	3prime_fragment	FALSE	canonical	3	539	junction_2	58	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	1479	False	NA	NA	False	NA	NA	NA	101509593	101516561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_101509672_101513305_101513493_101515034
tx.8601	chr4	-	913	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	115.5	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCTTCTTGATGT	NA	False	NA	NA	False	NA	NA	NA	101750986	101747216	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_101747741_101747885_101748198_101750909
tx.8602	chr4	-	1007	4	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9902	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	190.887983441133	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTTTTTCTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	101760888	101747219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_101747741_101747885_101748198_101760342_101760431_101760802
tx.8604	chr4	-	1980	3	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9751	1205	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	2.5	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTGTTTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	101828495	101823444	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_101824980_101825125_101825438_101828362
tx.8605	chr4	+	1909	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	0	6	0	-6	multi-exon	FALSE	canonical	3	69	junction_1	14.2560294261761	47	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTCCTTGCCTTAGT	42	False	NA	NA	False	NA	NA	NA	103171008	103223634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
tx.8606	chr4	+	1983	10	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	38.2935381197454	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTGCCTTAGTTTG	66	False	NA	NA	False	NA	NA	NA	103171032	103223637	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_103171081_103173440_103173536_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
tx.8607	chr4	+	1111	8	NIC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-56	3	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	7.28991475552747	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTGTTGTAACTTTCTT	NA	False	NA	NA	False	NA	NA	NA	104224730	104537582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104537387
tx.8608	chr4	+	1169	7	ISM	ENSMUSG00000028519.17	ENSMUST00000106830.9	5278	15	-30	64457	-30	5	5prime_fragment	FALSE	canonical	3	42	junction_1	2.40947204913349	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGTAACTTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	104224756	104537584	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266
tx.8609	chr4	+	1554	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	0	1605	0	-1605	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATCTTGTGGCCTTCCAA	NA	False	NA	NA	False	NA	NA	NA	105014543	105088356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
tx.861	chr10	+	3008	6	FSM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	1	-3	1	3	multi-exon	FALSE	canonical	3	210	junction_2	7.54718490564528	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTGTAATTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	42554912	42578458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
tx.8610	chr4	-	2090	8	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	1414	-402	1414	1	3prime_fragment	FALSE	canonical	1	5	junction_3	4.52656557650139	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTTCTACCAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	106473021	106448104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_106448885_106464485_106464620_106467596_106467723_106468609_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535
tx.8611	chr4	+	2206	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	-15	0	-7	0	multi-exon	FALSE	canonical	3	40	junction_1	0	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	106508287	106512479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_106508329_106510314
tx.8612	chr4	+	2217	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106782.2	502	2	28	-1743	-1	0	multi-exon	FALSE	canonical	3	39	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	106508293	106512479	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_106508346_106510314
tx.8613	chr4	-	2542	9	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-5	0	intron_retention	TRUE	canonical	3	276	junction_3	16.3893067272536	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTTTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	106536103	106519452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_106520429_106522852_106522936_106524692_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
tx.8614	chr4	-	2088	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	33	0	-10	0	multi-exon	FALSE	canonical	3	276	junction_4	15.561903466677	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTTTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	106536108	106519452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
tx.8615	chr4	-	1480	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	10	8	10	3	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	463	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGAGATTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	106924055	106913078	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
tx.8616	chr4	-	1571	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	200	4660	19	455	multi-exon	FALSE	canonical	3	63	junction_1	11	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCATAGTTTCCCCCATG	NA	False	NA	NA	False	NA	NA	NA	107035544	106996011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
tx.8617	chr4	+	1508	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	267	0	-1	0	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	864	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGAGTGTTGGGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	107035862	107058193	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
tx.8618	chr4	-	548	2	FSM	ENSMUSG00000028617.11	ENSMUST00000142657.2	407	2	104	-245	104	0	multi-exon	FALSE	canonical	3	214	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	NA	False	NA	NA	NA	107093073	107090710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_107091182_107092996
tx.8619	chr4	-	1097	7	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	6152	0	-3853	0	3prime_fragment	FALSE	canonical	3	194	junction_4	8.78761755097604	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	NA	False	NA	NA	NA	107104577	107090710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490
tx.862	chr10	+	1900	14	ISM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	37258	3232	-19174	-1	3prime_fragment	FALSE	canonical	3	208	junction_8	25.1125278149062	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTGGGCTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	42674749	42705278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
tx.8620	chr4	-	1704	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	51	0	51	0	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	298	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	NA	False	NA	NA	NA	107110678	107090710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
tx.8621	chr4	+	679	6	NNC	ENSMUSG00000063172.14	novel	581	6	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.089135660755	19	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATTTTTTTTATATAAA	NA	False	NA	NA	False	NA	NA	NA	107110787	107137136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_107110919_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
tx.8622	chr4	+	646	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	-33	-5	-6	1	multi-exon	FALSE	canonical	3	140	junction_1	99.534114754691	83	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCCATTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	107111088	107137130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
tx.8623	chr4	+	614	6	FSM	ENSMUSG00000063172.14	ENSMUST00000106749.8	607	6	-11	4	-6	2	multi-exon	FALSE	canonical	3	216	junction_1	69.6746725862418	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTCCATTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	107111088	107137131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_107111160_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
tx.8624	chr4	+	1308	10	FSM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	14	-1	-7	0	multi-exon	FALSE	canonical	3	322	junction_9	32.5261528202145	210	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	107171573	107217020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
tx.8625	chr4	+	1183	9	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	129.727599222371	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	107171573	107217020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107216803
tx.8626	chr4	+	1402	11	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	152.184887554579	4	3	1	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	107171573	107217020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107197527_107197622_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
tx.8627	chr4	+	2346	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	236	2002	-32	11	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCTATGGCAGCCGAACT	NA	False	NA	NA	False	NA	NA	NA	107225216	107271541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
tx.8628	chr4	+	655	5	FSM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	8	29	8	8	multi-exon	FALSE	canonical	3	977	junction_1	47.9446295219809	886	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATCTTTTTTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	107736959	107744592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_107737143_107738089_107738149_107740264_107740376_107742113_107742197_107744373
tx.8629	chr4	+	698	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	33	2266	-3	0	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	172	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	107747042	107754315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
tx.863	chr10	+	1808	4	ISM	ENSMUSG00000019802.14	ENSMUST00000155410.8	5206	20	54753	0	-1560	0	3prime_fragment	FALSE	canonical	3	254	junction_2	17.2111075245674	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTTGTTATTGTTC	NA	False	NA	NA	False	NA	NA	NA	42692363	42706388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_42692466_42699876_42699976_42703872_42703978_42704886
tx.8630	chr4	+	648	7	FSM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	219	684	-1	0	multi-exon	FALSE	canonical	3	677	junction_4	47.0558179187229	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	107747314	107754315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
tx.8631	chr4	-	1111	2	ISM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	16161	1	5317	1	3prime_fragment	FALSE	canonical	3	161	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGTTCCTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	107764646	107761178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_107761761_107764117
tx.8632	chr4	-	2349	5	FSM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	22	1	0	1	multi-exon	FALSE	canonical	3	130	junction_2	11.5866302262565	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGTTCCTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	107780785	107761178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_107761761_107764117_107765423_107769837_107769945_107771460_107771542_107780511
tx.8633	chr4	-	1443	5	FSM	ENSMUSG00000028603.16	ENSMUST00000106701.2	772	5	39	-710	-17	-1	multi-exon	TRUE	canonical	3	566	junction_3	53.5601297608585	178	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGCTTTTACTGTG	NA	False	NA	NA	False	NA	NA	NA	107928577	107901036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453
tx.8634	chr4	-	2630	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	9	1	9	-1	multi-exon	FALSE	canonical	3	305	junction_7	132.795314509043	120	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGCTTTTACTGTG	NA	False	NA	NA	False	NA	NA	NA	107975720	107901036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
tx.8635	chr4	+	1278	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	29	0	0	0	multi-exon	TRUE	canonical	3	713	junction_3	43.9463758530471	645	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	NA	False	NA	NA	NA	108022662	108036505	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
tx.8636	chr4	+	905	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	6	2803	6	58	multi-exon	FALSE	canonical	3	432	junction_2	33.5	363	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTTTATGGGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	108185342	108195938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_108185488_108189407_108189549_108195319
tx.8637	chr4	-	803	3	FSM	ENSMUSG00000059816.6	ENSMUST00000053157.7	593	3	-199	-11	-199	11	multi-exon	FALSE	canonical	3	46	junction_2	6	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGAATCTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	108240745	108224962	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_108225239_108234543_108234684_108240358
tx.8638	chr4	-	1038	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	230	21	-7	-21	multi-exon	FALSE	canonical	3	159	junction_2	16.5	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGCCCGTGGAAACCT	NA	False	NA	NA	False	NA	NA	NA	108263928	108257607	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_108258195_108260397_108260660_108263739
tx.8639	chr4	+	1372	4	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	91324	-6	1665	0	3prime_fragment	FALSE	canonical	3	135	junction_3	11.2249721603218	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATTCATCTGGTA	NA	False	NA	NA	False	NA	NA	NA	108407946	108416618	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_108408011_108412578_108413027_108414518_108414672_108415911
tx.864	chr10	+	2123	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	4	0	4	0	multi-exon	FALSE	canonical	3	61	junction_4	6.25316246521123	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	NA	NA	NA	43097485	43316598	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
tx.8640	chr4	-	1164	8	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	30	1	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_6	189.176302610522	11	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTTGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	108436503	108422065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108434240_108434286_108436181
tx.8641	chr4	-	1502	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	14	0	14	0	multi-exon	FALSE	canonical	3	462	junction_7	44.4233283170614	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	108436519	108422066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
tx.8642	chr4	+	4079	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	7	1197	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACATTTTTAAGGATT	5279	False	NA	NA	False	NA	NA	NA	108436657	108473227	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
tx.8643	chr4	+	3013	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	1	0	1	0	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	89	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5273	False	NA	NA	False	NA	NA	NA	108436651	108472030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
tx.8644	chr4	+	3267	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	30	6	30	-6	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGTTTTATGTAGCCA	3563	False	NA	NA	False	NA	NA	NA	108477166	108491314	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
tx.8645	chr4	-	1014	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	1	2126	1	297	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	744	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGCACATAATTGATGAA	NA	False	NA	NA	False	NA	NA	NA	108690810	108673617	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
tx.8646	chr4	+	1293	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	59	7	25	-7	multi-exon	FALSE	canonical	3	773	junction_6	37.6592913133296	1087	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTATGGTGGCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	108691856	108719317	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
tx.8647	chr4	+	1144	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	47	2136	47	0	multi-exon	FALSE	canonical	3	36	junction_4	5.5	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGCTTGTTTCCTATC	NA	False	NA	NA	False	NA	NA	NA	108736306	108798385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
tx.8648	chr4	+	3685	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	1	625	1	-9	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	9941	False	NA	NA	False	NA	NA	NA	108857852	108918349	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
tx.8649	chr4	+	703	3	ISM	ENSMUSG00000053510.13	ENSMUST00000150784.8	1958	16	19912	-1	1123	1	3prime_fragment	FALSE	canonical	3	655	junction_1	2	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCATCTGCCGTGG	NA	False	NA	NA	False	NA	NA	NA	108917310	108918673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_108917383_108917965_108918056_108918132
tx.865	chr10	+	476	2	NNC	ENSMUSG00000045886.8	novel	456	2	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCGGTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	43400079	43400640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_43400167_43400251
tx.8650	chr4	-	942	4	ISM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	53443	0	1397	0	3prime_fragment	FALSE	canonical	3	323	junction_3	9.28559218478941	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	108921790	108918846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759
tx.8651	chr4	-	1122	5	ISM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	52281	0	235	0	3prime_fragment	FALSE	canonical	3	308	junction_4	14.4287040305081	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	108922952	108918846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820
tx.8652	chr4	-	2631	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	-2	505	-2	0	multi-exon	FALSE	canonical	1	25	junction_18	113.002776514562	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	108975221	108918846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
tx.8653	chr4	-	2594	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	10	0	-4	0	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	108975223	108918846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
tx.8654	chr4	-	2799	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	38	-429	0	0	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	109059431	108918846	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
tx.8655	chr4	+	1760	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16166	2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	15	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTTCTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	109075515	109111544	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
tx.8656	chr4	+	1797	16	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	50959	1913	50550	-1913	3prime_fragment	FALSE	canonical	3	1050	junction_7	122.804922087386	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCATCCATGAGTATAT	NA	False	NA	NA	False	NA	NA	NA	109584743	109819244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
tx.8657	chr4	+	1510	13	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	81049	1913	80640	-1913	3prime_fragment	FALSE	canonical	3	1050	junction_4	130.836066850425	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCATCCATGAGTATAT	NA	False	NA	NA	False	NA	NA	NA	109614833	109819244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
tx.8658	chr4	+	955	3	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	109862637	109866106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_109862813_109864517_109864840_109865648
tx.8659	chr4	+	1270	3	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTCTTGTGTTACAT	NA	False	NA	NA	False	NA	NA	NA	109862637	109879549	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_109862813_109864517_109864840_109878776
tx.866	chr10	-	816	3	ISM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	7806	20	-7319	6	3prime_fragment	FALSE	canonical	3	928	junction_2	15	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTCTCCTGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	43409158	43401148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_43401405_43406593_43406667_43408671
tx.8660	chr4	+	597	2	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGCATGTGTCCTTATT	NA	False	NA	NA	False	NA	NA	NA	109864704	109866110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_109864840_109865648
tx.8661	chr4	-	1787	7	NIC	ENSMUSG00000028546.18	novel	3997	7	NA	NA	-32	577	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.286182749473	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCAAATTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	110209138	110062978	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
tx.8662	chr4	-	3801	6	FSM	ENSMUSG00000028546.18	ENSMUST00000106603.9	3761	6	-35	-5	-35	5	multi-exon	FALSE	canonical	3	15	junction_1	6.48074069840786	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCCCAAATTTTTAAATG	NA	False	NA	NA	False	NA	NA	NA	110209141	110060928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
tx.8663	chr4	+	1296	6	FSM	ENSMUSG00000028545.14	ENSMUST00000030274.7	1826	6	159	371	-42	0	multi-exon	FALSE	canonical	3	7	junction_2	5.19230199429887	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGCATTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	111272361	111317124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_111272598_111288213_111288348_111290365_111290751_111305702_111305852_111311281_111311496_111316946
tx.8664	chr4	+	2417	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	44	5	-10	3	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCTCTGGTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	111577224	111686334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
tx.8665	chr4	-	1808	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	60	1302	-32	-1302	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	72	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTCTTTCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	114844378	114817834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
tx.8666	chr4	+	1743	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	24	393	24	50	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	156	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCTAGATTTGCATGAT	NA	False	NA	NA	False	NA	NA	NA	115642204	115669118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
tx.8667	chr4	+	2927	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	-43	0	-43	0	multi-exon	FALSE	canonical	3	40	junction_1	9.42809041582063	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTGGGAAGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	115685245	115693382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
tx.8668	chr4	+	2521	13	FSM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	20	2	-3	-2	multi-exon	FALSE	canonical	3	99	junction_1	27.9607860325055	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	115696414	115736445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
tx.8669	chr4	+	2489	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-11	-2	at_least_one_novel_splicesite	TRUE	canonical	3	26	junction_1	42.5606593255112	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	115696406	115736445	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
tx.867	chr10	-	869	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	-29	20	-3	6	multi-exon	TRUE	canonical	3	617	junction_3	154.165135127528	115	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTCTCCTGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	43416993	43401148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
tx.8670	chr4	+	719	8	NIC	ENSMUSG00000028708.17	novel	1377	9	NA	NA	-9	15	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	62.8051733212987	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	115696408	115724539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115724492
tx.8671	chr4	+	1381	9	FSM	ENSMUSG00000028708.17	ENSMUST00000153766.8	1377	9	1	-5	1	5	multi-exon	FALSE	canonical	3	99	junction_1	26.830195209875	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATAGCGTGTCTTATT	NA	False	NA	NA	False	NA	NA	NA	115696420	115731072	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407
tx.8672	chr4	-	2507	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	199	1121	0	403	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTGGCTGGGATATC	NA	False	NA	NA	False	NA	NA	NA	115874924	115854986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
tx.8673	chr4	-	2237	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	39	163	39	0	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGTGCGTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	115911034	115890201	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
tx.8674	chr4	-	514	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	33	0	-4	0	multi-exon	FALSE	canonical	3	1017	junction_2	25.9272486435067	1492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7690	False	NA	NA	False	NA	NA	NA	115932235	115924161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
tx.8675	chr4	+	2953	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	112	0	-82	0	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCCTTCTTGATGATT	NA	False	NA	NA	False	NA	NA	NA	115932577	115954240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
tx.8676	chr4	-	2711	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	8	20	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_18	100.421042627873	27	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	NA	False	NA	NA	NA	115980874	115954151	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
tx.8677	chr4	-	5264	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	12	-389	intron_retention	FALSE	canonical	1	19	junction_18	118.034272591366	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTGTGGGCATGTGT	NA	False	NA	NA	False	NA	NA	NA	115980870	115951849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
tx.8678	chr4	-	2731	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	10	39	10	20	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	NA	False	NA	NA	NA	115980872	115954151	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
tx.8679	chr4	+	610	3	NNC	ENSMUSG00000028700.15	novel	557	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTCATGCATATAACT	NA	False	NA	NA	False	NA	NA	NA	115981031	115996047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_115981314_115994842_115995026_115995902
tx.868	chr10	+	1846	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	-30	0	-30	0	multi-exon	FALSE	canonical	3	74	junction_1	0	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTCTGTTGAATTTAT	NA	False	NA	NA	False	NA	NA	NA	43455134	43460261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_43455319_43458599
tx.8680	chr4	+	562	3	FSM	ENSMUSG00000028700.15	ENSMUST00000144311.2	557	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	7	junction_2	0.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTCATGCATATAACT	NA	False	NA	NA	False	NA	NA	NA	115981031	115996047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_115981314_115994890_115995026_115995902
tx.8681	chr4	-	839	2	FSM	ENSMUSG00000028701.5	ENSMUST00000030469.5	5742	2	11	4892	11	222	multi-exon	FALSE	canonical	3	8	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTACTTTGTGGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	116001795	115994494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_115995032_116001493
tx.8682	chr4	+	2680	22	FSM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	39	0	32	0	multi-exon	TRUE	canonical	3	321	junction_9	36.7984644262092	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	NA	False	NA	NA	NA	116007753	116017041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
tx.8683	chr4	+	2287	10	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	47	3174	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	22.8958996814325	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGAGGGGTAGCGGTG	NA	False	NA	NA	False	NA	NA	NA	116364795	116398614	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996_116395118_116398080
tx.8684	chr4	+	1335	5	ISM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	52	13695	49	-13695	5prime_fragment	FALSE	canonical	3	66	junction_1	9.20258115965298	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATACCAATACGTACTT	NA	False	NA	NA	False	NA	NA	NA	116364797	116381737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382
tx.8685	chr4	+	1336	6	ISM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	58	8371	55	-8371	5prime_fragment	FALSE	canonical	3	66	junction_1	8.66256313108309	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGACATGTTCATTACT	NA	False	NA	NA	False	NA	NA	NA	116364803	116387061	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867
tx.8686	chr4	+	2064	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	62	-8	59	0	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAGTACAAATGGTATT	NA	False	NA	NA	False	NA	NA	NA	116364807	116395440	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
tx.8687	chr4	+	1055	3	ISM	ENSMUSG00000028696.13	ENSMUST00000030461.5	2115	9	22860	-266	22860	266	3prime_fragment	FALSE	canonical	3	65	junction_1	9	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGCTAGAAACTTCTG	NA	False	NA	NA	False	NA	NA	NA	116387608	116395706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_116387733_116389754_116389976_116394996
tx.8688	chr4	-	939	3	FSM	ENSMUSG00000055900.15	ENSMUST00000069674.6	974	3	-27	62	-26	-62	multi-exon	TRUE	canonical	3	51	junction_2	6.5	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGGTATTATTTACA	NA	False	NA	NA	False	NA	NA	NA	116413159	116410213	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_116410927_116411964_116412101_116413069
tx.8689	chr4	+	3422	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	28	138	28	-138	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTGGATTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	116414882	116450941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
tx.869	chr10	-	1976	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	5	0	5	0	multi-exon	FALSE	canonical	3	72	junction_2	11.040380428228	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGGATTTTACTATAAT	NA	False	NA	NA	False	NA	NA	NA	43777736	43750183	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
tx.8690	chr4	+	875	2	ISM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	37	23978	37	-11538	5prime_fragment	FALSE	canonical	3	321	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCCCCTTTTTTAAATG	NA	False	NA	NA	False	NA	NA	NA	116414891	116427101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_116415026_116426360
tx.8691	chr4	+	1428	4	NIC	ENSMUSG00000034035.19	novel	1167	6	NA	NA	-38	6	intron_retention	FALSE	canonical	0	0	junction_3	0.471404520791032	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTCAAATATTTAGTTA	6237	False	NA	NA	False	NA	NA	NA	116454918	116457404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_116455159_116455696_116456362_116456485_116456688_116457083
tx.8692	chr4	-	1670	10	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	16916	-2	-4777	2	3prime_fragment	FALSE	canonical	3	898	junction_9	170.844597641277	189	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTTGATGGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	116468222	116458803	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599
tx.8693	chr4	-	2535	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	445	0	1	0	3prime_fragment	TRUE	canonical	3	774	junction_12	215.450595691155	275	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	NA	False	NA	NA	NA	116484693	116458805	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
tx.8694	chr4	-	1369	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	51	0	51	0	multi-exon	FALSE	canonical	3	1447	junction_3	104.145331148352	1319	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	NA	False	NA	NA	NA	116508826	116493706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
tx.8695	chr4	+	932	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	55	1307	0	243	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	2679	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	116542795	116556712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
tx.8696	chr4	-	1879	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	73	154	-45	-154	multi-exon	TRUE	canonical	3	184	junction_2	7.07106781186548	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTTGTTTGCCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	116565530	116559629	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
tx.8697	chr4	+	1549	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	-335	-1	-1	0	multi-exon	FALSE	canonical	3	19	junction_2	20.3239201040316	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTCTGTAAATCTTG	5642	False	NA	NA	False	NA	NA	NA	116565791	116572301	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
tx.8699	chr4	+	3040	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	2	-9	2	9	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTTGCTGTATAGCT	NA	False	NA	NA	False	NA	NA	NA	116578146	116661448	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
tx.87	chr1	-	1204	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	27	0	23	0	multi-exon	FALSE	canonical	3	173	junction_5	18.2543754267908	167	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	NA	False	NA	NA	NA	37929465	37917968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
tx.870	chr10	-	1259	9	ISM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	11	7271	11	-545	5prime_fragment	FALSE	canonical	3	75	junction_6	9.72111104761179	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAATCTTTGCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	43777730	43757454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
tx.8700	chr4	-	1918	7	ISM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	880	0	-160	0	3prime_fragment	FALSE	canonical	3	103	junction_2	11.3822473859759	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	2819	False	NA	NA	False	NA	NA	NA	116663957	116661198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813
tx.8701	chr4	-	2043	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	47	0	13	0	multi-exon	FALSE	canonical	3	103	junction_2	11.8252583351856	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1986	False	NA	NA	False	NA	NA	NA	116664790	116661198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
tx.8702	chr4	-	2101	8	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_7	40.0209129004794	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1973	False	NA	NA	False	NA	NA	NA	116664803	116661198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
tx.8703	chr4	+	1759	17	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	43.6183286446191	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTCTGGGCTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	116664917	116676638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
tx.8705	chr4	+	1638	16	FSM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	19	-3	4	3	multi-exon	FALSE	canonical	3	103	junction_1	29.5893374188894	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGAACTTTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	116664938	116676631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
tx.8707	chr4	+	1563	15	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	52.7655577212319	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGAACTTTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	116664939	116676631	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
tx.8708	chr4	-	1198	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	44	247	-5	5	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	84	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTCTTTTGTAAAGGC	NA	False	NA	NA	False	NA	NA	NA	116851566	116847408	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
tx.8709	chr4	+	1531	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	24	0	18	0	multi-exon	TRUE	canonical	3	567	junction_7	49.9305302519377	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCAGTGGTAGAG	NA	False	NA	NA	False	NA	NA	NA	116876622	116944049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
tx.871	chr10	+	2328	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	29	-5	-28	5	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	102	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGGCTCAAGTGA	NA	False	NA	NA	False	NA	NA	NA	44144382	44240292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
tx.8710	chr4	+	238	2	FSM	ENSMUSG00000028683.15	ENSMUST00000129587.2	541	2	307	-4	307	0	multi-exon	FALSE	canonical	3	600	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCAGTGGTAGAG	NA	False	NA	NA	False	NA	NA	NA	116938784	116944049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_116938859_116943885
tx.8711	chr4	-	1094	2	ISM	ENSMUSG00000073771.12	ENSMUST00000153924.8	1956	4	1027	655	-38	3	3prime_fragment	FALSE	canonical	3	41	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAATATTTGTATTCTGT	NA	False	NA	NA	False	NA	NA	NA	116978500	116977070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_116978059_116978394
tx.8712	chr4	-	2643	8	FSM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	-75	-948	32	-8	multi-exon	FALSE	canonical	2	11	junction_7	6.73401357108153	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACACAGCTTTAATGTCA	9672	False	NA	NA	False	NA	NA	NA	116982890	116976423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135_116981338_116982525
tx.8714	chr4	-	734	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	119	7	-40	0	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	1968	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTAGGTGTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	117013321	117011030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
tx.8715	chr4	-	2823	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	24	-5	-9	5	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	24	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	NA	False	NA	NA	NA	117039812	117016830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
tx.8716	chr4	+	955	3	FSM	ENSMUSG00000048772.16	ENSMUST00000062824.12	991	3	38	-2	38	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTATCTATCCTGGGGGC	NA	False	NA	NA	False	NA	NA	NA	117109185	117125779	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_117109332_117123056_117123173_117125086
tx.8717	chr4	-	1814	10	ISM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	277	-8	-56	0	3prime_fragment	TRUE	canonical	0	0	junction_5	318.755914977798	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9847	False	NA	NA	False	NA	NA	NA	117146366	117128660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
tx.8718	chr4	+	1295	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-34	2	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_1	221.525785111774	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	NA	False	NA	NA	NA	117407527	117531480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_117407560_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
tx.8719	chr4	+	1022	7	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-39	2	at_least_one_novel_splicesite	TRUE	canonical	3	91	junction_1	242.081769931842	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	NA	False	NA	NA	NA	117407522	117531480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_117407560_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
tx.872	chr10	+	2220	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	-15	5	combination_of_known_splicesites	FALSE	canonical	3	39	junction_5	103.891636921468	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGGCTCAAGTGA	NA	False	NA	NA	False	NA	NA	NA	44144395	44240292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44222952_44223071_44238911
tx.8721	chr4	+	1363	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	225.311693826574	6	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	NA	False	NA	NA	NA	117407533	117531478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
tx.8722	chr4	+	1339	8	ISM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	2601	16	356	0	3prime_fragment	FALSE	canonical	3	348	junction_1	142.213550259991	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	NA	False	NA	NA	NA	117410162	117531478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
tx.8723	chr4	-	1519	10	ISM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	278	0	-12	0	3prime_fragment	FALSE	canonical	3	219	junction_4	16.8259059521653	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	NA	False	NA	NA	NA	117539192	117531877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029
tx.8724	chr4	-	1539	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	27	0	7	0	multi-exon	FALSE	canonical	3	80	junction_10	49.3527101586124	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	NA	False	NA	NA	NA	117539443	117531877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
tx.8725	chr4	-	1553	11	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_10	51.6295458047037	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	NA	False	NA	NA	NA	117539446	117531877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
tx.8726	chr4	-	676	5	ISM	ENSMUSG00000033379.14	ENSMUST00000150204.8	935	7	1206	-7	-220	0	3prime_fragment	FALSE	canonical	3	2536	junction_3	94.6229359087954	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	NA	False	NA	NA	NA	117743311	117741522	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264
tx.8727	chr4	-	1004	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	-4	0	0	0	multi-exon	FALSE	canonical	3	2123	junction_7	187.196393650942	483	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	NA	False	NA	NA	NA	117744530	117741522	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
tx.8728	chr4	-	2282	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	9	264	0	0	multi-exon	TRUE	canonical	3	66	junction_1	6.70522184569608	30	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	NA	False	NA	NA	NA	117749220	117746103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
tx.8729	chr4	+	1165	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	-20	0	-3	0	multi-exon	FALSE	canonical	3	450	junction_1	88.2754527349226	137	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	NA	False	NA	NA	NA	118266542	118272308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
tx.873	chr10	-	3385	3	ISM	ENSMUSG00000038151.14	ENSMUST00000039174.11	5281	8	17503	-3	15965	3	3prime_fragment	FALSE	canonical	3	47	junction_2	4	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGCTTGTCTAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	44317241	44313169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_44316239_44316654_44316784_44317054
tx.8730	chr4	+	1130	6	ISM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	1513	0	531	0	3prime_fragment	FALSE	canonical	3	642	junction_1	31.4388294947506	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	NA	False	NA	NA	NA	118268075	118272308	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
tx.8731	chr4	-	1773	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	20	0	20	0	multi-exon	TRUE	canonical	3	1043	junction_4	200.755117703013	410	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	NA	False	NA	NA	NA	118294529	118290097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
tx.8732	chr4	+	963	3	FSM	ENSMUSG00000028536.13	ENSMUST00000030261.6	958	3	-8	3	-8	-3	multi-exon	FALSE	canonical	3	18	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAGTCTTTTTATATTT	8932	False	NA	NA	False	NA	NA	NA	118384431	118387422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_118384535_118386395_118386509_118386675
tx.8733	chr4	-	1859	4	FSM	ENSMUSG00000050854.10	ENSMUST00000128098.8	929	4	-12	-918	-12	0	multi-exon	FALSE	canonical	2	4	junction_3	2.44948974278318	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTCTGCACCATGGCA	7997	False	NA	NA	False	NA	NA	NA	118401253	118398137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118401129
tx.8734	chr4	+	1127	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	42	1791	-7	367	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	949	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGGTTAAAACCAGAT	NA	False	NA	NA	False	NA	NA	NA	118478037	118483182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
tx.8736	chr4	+	2516	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	91	653	-2	0	multi-exon	TRUE	canonical	3	565	junction_3	58.8236535946402	130	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	667	False	NA	NA	False	NA	NA	NA	118965998	118994527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
tx.8737	chr4	+	2273	9	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	11752	653	11549	0	3prime_fragment	FALSE	canonical	3	565	junction_2	62.3919065264077	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	9497	False	NA	NA	False	NA	NA	NA	118977659	118994527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
tx.8738	chr4	-	1585	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	0	3	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTGTACTTATTTGG	NA	False	NA	NA	False	NA	NA	NA	119031392	119026712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_119028240_119031334
tx.8739	chr4	+	663	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	70	0	-31	0	multi-exon	FALSE	canonical	3	443	junction_2	4.5	89	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	NA	False	NA	NA	NA	119052572	119058495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_119052684_119053068_119053219_119058093
tx.874	chr10	+	1102	4	Antisense	novelGene_ENSMUSG00000038151.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	1.69967317119759	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAGCTTTCATGGGAAG	NA	False	NA	NA	False	NA	NA	NA	44317228	44321926	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_44317329_44318670_44318850_44319642_44319731_44321191
tx.8740	chr4	-	959	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	16	6176	-11	364	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCGGAACCATTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	119089893	119083214	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
tx.8741	chr4	-	595	2	FSM	ENSMUSG00000028639.15	ENSMUST00000145976.2	718	2	309	-186	309	0	multi-exon	FALSE	canonical	3	10943	junction_1	0	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	NA	NA	NA	119136338	119135177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_119135565_119136130
tx.8742	chr4	-	737	3	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	12951	0	533	0	3prime_fragment	FALSE	canonical	3	9851	junction_2	546	462	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	NA	NA	NA	119138850	119135177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_119135565_119136130_119136397_119138766
tx.8743	chr4	-	1297	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	331	0	207	0	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	NA	NA	NA	119151470	119135177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
tx.8744	chr4	-	753	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	47	0	0	0	multi-exon	TRUE	canonical	2	32	junction_8	163.771144144263	159	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9629	False	NA	NA	False	NA	NA	NA	119177696	119157206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
tx.8745	chr4	-	772	10	FSM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	-15	0	0	0	multi-exon	FALSE	canonical	2	32	junction_8	169.629516415942	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9629	False	NA	NA	False	NA	NA	NA	119177696	119157206	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
tx.8746	chr4	-	1860	9	NIC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	4.28478412525065	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTTAGTAATTTCT	9732	False	NA	NA	False	NA	NA	NA	119272709	119209441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_119209850_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
tx.8747	chr4	-	1396	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	47	0	3	0	multi-exon	FALSE	canonical	3	273	junction_2	22	208	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGTTTCTGGTTTTTT	5552	False	NA	NA	False	NA	NA	NA	119279570	119275726	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_119276491_119278776_119278881_119279042
tx.8748	chr4	+	3360	17	FSM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	-6	-1	-6	1	multi-exon	FALSE	canonical	3	47	junction_13	8.94776508408664	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGTCTTTTTAACCAGT	NA	False	NA	NA	False	NA	NA	NA	120262497	120387382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
tx.8749	chr4	+	1566	5	FSM	ENSMUSG00000000085.17	ENSMUST00000136801.8	1536	5	-31	1	-31	-1	multi-exon	FALSE	canonical	3	10	junction_1	26.8735464723211	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGTGTCTTTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	120374791	120387380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_120374904_120379651_120379847_120382194_120382261_120385352_120385496_120386330
tx.8750	chr4	-	2710	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	-5	0	-5	0	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	139	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	120427478	120397064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
tx.8751	chr4	-	1965	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	-33	0	-32	0	multi-exon	TRUE	canonical	3	393	junction_8	23.5424491839793	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	NA	False	NA	NA	NA	120682936	120614634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
tx.8753	chr4	-	2007	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	-11	0	1	0	multi-exon	FALSE	canonical	3	95	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGATGTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	120782213	120778392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_120779894_120781707
tx.8755	chr4	-	3418	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	11	0	11	0	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	120955427	120916433	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
tx.8756	chr4	+	2294	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	2	85	2	-85	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTATCATTTTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	122730036	122752786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
tx.8757	chr4	-	2770	13	FSM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	-158	8	-13	-8	multi-exon	FALSE	canonical	3	217	junction_12	208.332399997909	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	NA	False	NA	NA	NA	122779862	122752847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
tx.8759	chr4	-	2743	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	-14	8	-2	-8	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	NA	False	NA	NA	NA	122779851	122752847	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
tx.8760	chr4	+	2063	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	0	11	0	-11	multi-exon	FALSE	canonical	3	89	junction_3	10.336343647538	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTCTATACAGCATGCT	NA	False	NA	NA	False	NA	NA	NA	122910389	122948731	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
tx.8761	chr4	-	1214	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	canonical	3	116	junction_6	303.134000439116	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	123033739	123020907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030633_123030692_123031318_123031363_123032658_123032758_123033694
tx.8762	chr4	-	1183	10	FSM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	5	0	5	0	multi-exon	FALSE	canonical	3	832	junction_9	90.3078411481501	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	123033739	123020907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
tx.8763	chr4	-	2377	9	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	832	junction_8	93.9161860384034	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	123033739	123020907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123030692_123031318_123031363_123032658_123032758_123033694
tx.8764	chr4	-	1259	10	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_6	304.035816603534	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	123033744	123020907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123031318_123031363_123032658_123032758_123033694
tx.8765	chr4	-	1138	9	ISM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	986	1	60	-1	3prime_fragment	FALSE	canonical	3	964	junction_1	52.992776630405	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	NA	False	NA	NA	NA	123032758	123020908	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658
tx.8766	chr4	+	2325	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	691	3	507	-3	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGATGCCAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	123177394	123192622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
tx.8767	chr4	+	570	3	NNC	ENSMUSG00000087307.2	novel	431	2	NA	NA	-2633	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	5	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACCATTGTGGTTCAC	NA	False	NA	NA	False	NA	NA	NA	123557040	123565010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_123557174_123561402_123561541_123564711
tx.8768	chr4	+	398	3	NNC	ENSMUSG00000087307.2	novel	678	3	NA	NA	-2653	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	10.5	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCGCCTTTTATTGTG	NA	False	NA	NA	False	NA	NA	NA	123557020	123562523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_123557174_123561402_123561541_123562416
tx.8769	chr4	-	563	3	FSM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	-5	-33	-5	33	multi-exon	FALSE	canonical	3	1318	junction_2	395	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGTTGTCCTAGTTGC	1827	False	NA	NA	False	NA	NA	NA	123612000	123606469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_123606720_123609656_123609875_123611905
tx.877	chr10	+	2710	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	23	8200	23	-8200	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTAGTTTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	44943321	45035094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
tx.8770	chr4	-	478	3	NNC	ENSMUSG00000028648.14	novel	525	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	1049	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1856	False	NA	NA	False	NA	NA	NA	123611971	123606502	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_123606720_123609656_123609852_123611905
tx.8771	chr4	-	548	3	FSM	ENSMUSG00000028648.14	ENSMUST00000106206.8	599	3	43	8	38	-8	multi-exon	FALSE	canonical	3	65	junction_2	1021.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTTAGTCTGTTTGCTT	1891	False	NA	NA	False	NA	NA	NA	123611936	123606510	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_123606720_123609656_123609875_123611815
tx.8772	chr4	+	1409	7	FSM	ENSMUSG00000043333.13	ENSMUST00000106204.2	1120	7	7	-296	7	296	multi-exon	FALSE	canonical	3	17	junction_1	3.97562014729219	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGACTCTTGCTTCC	NA	False	NA	NA	False	NA	NA	NA	123703713	123723993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_123703970_123708035_123708185_123711656_123711770_123716549_123716651_123718653_123718715_123720630_123720693_123723326
tx.8774	chr4	+	1499	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	170	16	-39	-16	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTTTTGTTAATCCT	NA	False	NA	NA	False	NA	NA	NA	123798794	123806046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
tx.8775	chr4	+	385	4	FSM	ENSMUSG00000028647.14	ENSMUST00000106202.4	1536	4	88	1063	-39	290	multi-exon	FALSE	canonical	3	305	junction_3	15.9652400197707	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTATCTGACCAAATCCT	NA	False	NA	NA	False	NA	NA	NA	123798794	123803806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629
tx.8776	chr4	+	1506	4	FSM	ENSMUSG00000028647.14	ENSMUST00000137685.2	500	4	5	-1011	5	-16	multi-exon	FALSE	canonical	3	284	junction_3	24.8596057893121	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTTTTGTTAATCCT	NA	False	NA	NA	False	NA	NA	NA	123798933	123806046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_123799100_123803426_123803476_123803629_123803760_123804885
tx.8777	chr4	-	453	2	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	373	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	124252215	124246965	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_-_124247180_124251976
tx.8778	chr4	-	980	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	13	610	13	27	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	534	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGACTTGATGTCTT	NA	False	NA	NA	False	NA	NA	NA	124587380	124572562	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
tx.8779	chr4	+	1759	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	42	19	42	-19	multi-exon	FALSE	canonical	3	1027	junction_12	104.342509913266	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGTTTCTGAAACCCA	NA	False	NA	NA	False	NA	NA	NA	124608610	124626234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
tx.878	chr10	+	1098	4	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	83285	8201	83285	-8201	3prime_fragment	FALSE	canonical	3	820	junction_3	27.1456974286698	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTAGTTTTGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	45026583	45035093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_45026627_45029150_45029283_45031611_45031769_45034327
tx.8780	chr4	+	621	5	ISM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	13354	19	6397	-19	3prime_fragment	FALSE	canonical	3	1316	junction_1	41.4268934389244	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGTTTCTGAAACCCA	NA	False	NA	NA	False	NA	NA	NA	124621922	124626234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
tx.8781	chr4	+	3003	18	ISM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	9740	0	9712	0	3prime_fragment	FALSE	canonical	3	118	junction_11	23.4933547256022	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	124645382	124695304	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
tx.8782	chr4	+	794	2	FSM	ENSMUSG00000028890.14	ENSMUST00000147452.2	781	2	-10	-3	-10	3	multi-exon	FALSE	canonical	3	116	junction_1	0	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTCATGTTTATACTG	342	False	NA	NA	False	NA	NA	NA	124696364	124699174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_124696437_124698452
tx.8783	chr4	+	2708	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	17	4906	-16	-4485	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGGTTTCCATCACTT	336	False	NA	NA	False	NA	NA	NA	124696358	124738687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
tx.8784	chr4	-	733	3	FSM	ENSMUSG00000078570.11	ENSMUST00000163946.2	762	3	26	3	26	-2	multi-exon	FALSE	canonical	3	65	junction_2	68	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGACTGACCTTTCTTTT	7681	False	NA	NA	False	NA	NA	NA	124744497	124743280	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_124743756_124744024_124744227_124744441
tx.8785	chr4	-	768	2	FSM	ENSMUSG00000078570.11	ENSMUST00000137769.3	659	2	39	-148	39	87	multi-exon	FALSE	canonical	3	201	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACATGTACTACCAGATT	7951	False	NA	NA	False	NA	NA	NA	124744227	124743190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_124743756_124744024
tx.8787	chr4	-	1610	10	FSM	ENSMUSG00000028873.17	ENSMUST00000084296.10	1626	10	16	0	16	0	multi-exon	FALSE	canonical	3	1430	junction_6	123.940846105444	1124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	NA	False	NA	NA	NA	124830694	124812257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
tx.8788	chr4	+	2841	6	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	-2	0	intron_retention	FALSE	non_canonical	3	26	junction_1	9.3936148526539	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACATTTGGTAAATATA	NA	False	NA	NA	False	NA	NA	NA	124830848	124838449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_124830884_124830971_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
tx.8789	chr4	+	2345	16	FSM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	25	-4	25	0	multi-exon	FALSE	canonical	3	650	junction_4	51.4673575083168	180	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGTGTTCGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	124923809	124949173	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
tx.879	chr10	+	1057	3	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	85851	8200	85851	-8200	3prime_fragment	FALSE	canonical	3	820	junction_2	33	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTAGTTTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	45029149	45035094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_45029283_45031611_45031769_45034327
tx.8790	chr4	+	1196	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	8	3346	8	3	multi-exon	TRUE	canonical	3	173	junction_5	63.7427555796648	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCAGCTGCCTCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	124978934	125003685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
tx.8791	chr4	+	1244	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	-12	-178	1	3	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCAGCTGCCTCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	124978944	125003685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
tx.8792	chr4	+	878	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	1	-7	1	7	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGCCTCTTTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	124978944	125003689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
tx.8793	chr4	+	1002	6	NIC	ENSMUSG00000028863.14	novel	872	6	NA	NA	-3	379	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	120.208818312135	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCATCAACAGATTCTT	NA	False	NA	NA	False	NA	NA	NA	124978953	124997675	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_124997222
tx.8794	chr4	-	1608	6	NIC	ENSMUSG00000085562.8	novel	3623	7	NA	NA	51	350	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1.62480768092719	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCCTCAAAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	125816159	125783857	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_125784527_125785276_125785384_125786974_125787070_125787635_125787764_125812280_125812600_125815869
tx.8795	chr4	+	896	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	48	-7	-4	7	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	585	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAAGATGGCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	125940765	125949332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
tx.8796	chr4	+	1483	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	0	3530	0	1	multi-exon	FALSE	canonical	3	15	junction_8	4.26296135405575	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTCCCCATTATTCTCA	2363	False	NA	NA	False	NA	NA	NA	125952357	125982458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
tx.8797	chr4	+	932	7	ISM	ENSMUSG00000042616.9	ENSMUST00000143712.3	1473	11	18732	-1	-5592	1	3prime_fragment	FALSE	canonical	3	15	junction_5	3.76017139089283	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTCCCCATTATTCTCA	NA	False	NA	NA	False	NA	NA	NA	125971128	125982458	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
tx.8798	chr4	+	823	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	-12	-3	-12	0	multi-exon	FALSE	canonical	3	54	junction_1	0	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTGCCTGATGCCCTG	NA	False	NA	NA	False	NA	NA	NA	125990433	125992377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_125990501_125991621
tx.8799	chr4	+	861	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	82	0	45	0	multi-exon	FALSE	canonical	3	289	junction_1	0	118	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTGCCTGATGCCCTG	NA	False	NA	NA	False	NA	NA	NA	125990497	125992377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_125990603_125991621
tx.88	chr1	+	635	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	1	26	0	0	multi-exon	FALSE	canonical	3	190	junction_1	367.71796257458	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	37929613	37937419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
tx.880	chr10	+	1743	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	102	8	5	-8	multi-exon	FALSE	canonical	3	31	junction_1	0.942809041582063	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCAATTTGAAGATGAC	NA	False	NA	NA	False	NA	NA	NA	45165502	45194540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
tx.8800	chr4	+	892	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	472	0	-57	0	multi-exon	FALSE	canonical	3	244	junction_1	47.5	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	7073	False	NA	NA	False	NA	NA	NA	126042267	126043668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_126042425_126042743_126042839_126043028
tx.8801	chr4	+	797	2	NIC	ENSMUSG00000050212.5	novel	1364	3	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	7073	False	NA	NA	False	NA	NA	NA	126042267	126043668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_126042425_126043028
tx.8802	chr4	-	1574	2	FSM	ENSMUSG00000043962.17	ENSMUST00000154702.2	609	2	508	-1473	508	0	multi-exon	FALSE	canonical	3	903	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	9545	False	NA	NA	False	NA	NA	NA	126060761	126057874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_126059411_126060723
tx.8803	chr4	-	1872	3	FSM	ENSMUSG00000043962.17	ENSMUST00000140390.2	2656	3	788	-4	-185	0	multi-exon	FALSE	canonical	3	779	junction_2	62	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	8852	False	NA	NA	False	NA	NA	NA	126061454	126057874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_126059411_126060723_126060868_126061262
tx.8804	chr4	-	1781	5	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	325.07797141609	7	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6780	False	NA	NA	False	NA	NA	NA	126096447	126057874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_126059411_126060723_126060756_126080341_126080382_126088109_126088198_126096362
tx.8805	chr4	-	1709	4	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	360.371413344005	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTGTTGCTTGTGTG	6768	False	NA	NA	False	NA	NA	NA	126096459	126057870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_126059411_126060723_126060756_126080341_126080382_126096362
tx.8806	chr4	-	2376	4	NIC	ENSMUSG00000043962.17	novel	339	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	517	junction_3	151.240059361122	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTATCCTAAATAACTT	6772	False	NA	NA	False	NA	NA	NA	126096455	126072566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_126074608_126080227_126080382_126088109_126088198_126096362
tx.8807	chr4	-	1018	6	ISM	ENSMUSG00000028849.18	ENSMUST00000125981.8	2363	12	6183	0	-380	0	3prime_fragment	FALSE	canonical	3	247	junction_5	22.2261107708929	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	NA	False	NA	NA	NA	126127721	126125959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685
tx.8808	chr4	+	1289	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	47	0	-28	0	multi-exon	FALSE	canonical	3	345	junction_3	21.2882009573378	126	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGTTTTCCTTCT	7672	False	NA	NA	False	NA	NA	NA	126156164	126169676	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
tx.8809	chr4	-	1661	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	11	0	11	0	multi-exon	FALSE	canonical	3	286	junction_3	41.9218320210365	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	7087	False	NA	NA	False	NA	NA	NA	126215485	126209839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
tx.8810	chr4	-	1641	11	NIC	ENSMUSG00000028845.16	novel	1542	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	3.61247837363769	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCTTTTCTGCTAC	3340	False	NA	NA	False	NA	NA	NA	126219232	126215913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_126216213_126216364_126216445_126216612_126216757_126216912_126217021_126217149_126217265_126217431_126217576_126218022_126218229_126218386_126218513_126218595_126218802_126218926_126218997_126219089
tx.8811	chr4	-	1315	7	NIC	ENSMUSG00000028842.16	novel	625	4	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	7.32006375199925	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCCTTTCATAATCT	2378	False	NA	NA	False	NA	NA	NA	126323335	126269467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_126269734_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
tx.8812	chr4	+	685	3	ISM	ENSMUSG00000042489.16	ENSMUST00000123695.2	2756	4	-28	3504	-18	47	5prime_fragment	FALSE	canonical	3	60	junction_1	0.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAACAAGATGTGAGG	NA	False	NA	NA	False	NA	NA	NA	126450769	126454126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_126450931_126453000_126453110_126453711
tx.8813	chr4	+	836	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	23	0	23	0	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	1303	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	5403	False	NA	NA	False	NA	NA	NA	126571445	126603507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
tx.8814	chr4	+	1135	3	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	5950	440	829	-440	3prime_fragment	FALSE	canonical	3	1050	junction_1	9	385	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTTCATGTATTACTTC	NA	False	NA	NA	False	NA	NA	NA	126921066	126924589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_126921110_126921189_126921312_126923619
tx.8815	chr4	+	1094	2	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	6071	440	950	-440	3prime_fragment	FALSE	canonical	3	1068	junction_1	0	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTTCATGTATTACTTC	NA	False	NA	NA	False	NA	NA	NA	126921187	126924589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_126921312_126923619
tx.8816	chr4	+	1240	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	-666	0	-666	0	multi-exon	FALSE	canonical	3	313	junction_2	16	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	NA	False	NA	NA	NA	126928576	126930806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_126929648_126930355_126930443_126930724
tx.8817	chr4	-	1301	8	NNC	ENSMUSG00000043872.15	novel	621	4	NA	NA	-4	10114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.612288631747	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCTCTTTCGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	126954949	126930772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_126931031_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
tx.8818	chr4	-	3259	8	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-16	14	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	147.423034226026	1	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGTTGGAGGTTC	NA	False	NA	NA	False	NA	NA	NA	126954895	126941371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952767_126953302_126953453_126954788
tx.8819	chr4	-	3175	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	10	10	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	141.739981029427	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTTTGTTTGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	126954907	126941375	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126954788
tx.882	chr10	+	1740	4	ISM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	15	232531	15	18	5prime_fragment	FALSE	canonical	3	92	junction_3	4.71404520791032	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTTTTGATCAATTTC	NA	False	NA	NA	False	NA	NA	NA	50468779	50495050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807
tx.8820	chr4	-	3353	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	8	491	8	8	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	126954937	126941377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
tx.8821	chr4	-	2586	4	ISM	ENSMUSG00000043872.15	ENSMUST00000055013.10	3001	6	7611	-4	6198	4	3prime_fragment	FALSE	canonical	3	404	junction_3	11.4406682011537	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATGAAGTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	126945168	126941381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067
tx.8822	chr4	-	1281	2	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTGGCTAAGATCAAAT	NA	False	NA	NA	False	NA	NA	NA	126971111	126965849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_-_126966878_126970858
tx.8823	chr4	+	1124	3	FSM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	98	junction_2	3.5	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	NA	False	NA	NA	NA	127019834	127023437	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_127019987_127021611_127021793_127022646
tx.8824	chr4	+	612	3	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	-3680	-13975	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	82.5	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTAATCTTGGCACTT	NA	False	NA	NA	False	NA	NA	NA	127093418	127094572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_127093672_127094056_127094130_127094286
tx.8825	chr4	+	2403	8	ISM	ENSMUSG00000042388.15	ENSMUST00000106094.9	4207	12	27262	0	-3164	0	3prime_fragment	FALSE	canonical	3	155	junction_3	14.059639731791	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATCTCTCCAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	127093934	127130815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
tx.8826	chr4	+	1007	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	15	0	15	0	multi-exon	FALSE	canonical	3	445	junction_1	0	287	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGAGTCCTGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	127137591	127141602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_127137692_127140695
tx.8827	chr4	-	1603	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	20	0	20	0	multi-exon	FALSE	canonical	3	984	junction_1	0	587	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	NA	False	NA	NA	NA	127222934	127219027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_127220565_127222868
tx.8828	chr4	-	1844	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	36	0	36	0	multi-exon	FALSE	canonical	3	980	junction_1	0	591	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	NA	False	NA	NA	NA	127224601	127219027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_127220565_127224294
tx.8829	chr4	+	546	4	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	21.4165045389453	18	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATCATCATCATTATT	9234	False	NA	NA	False	NA	NA	NA	127223995	127237109	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr4_+_127224096_127225680_127225785_127226134_127226258_127236890
tx.883	chr10	+	3021	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	5	-2	5	0	multi-exon	FALSE	canonical	3	170	junction_2	11.5134703716994	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGACTTCTATTTGGC	NA	False	NA	NA	False	NA	NA	NA	52109719	52197474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
tx.8830	chr4	+	445	4	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	31.7104959840674	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTGTGTTTGTGTGT	9246	False	NA	NA	False	NA	NA	NA	127224007	127232837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr4_+_127224096_127225680_127225785_127226134_127226258_127232707
tx.8831	chr4	-	1445	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAGTCAGGCGGAGAA	4504	False	NA	NA	False	NA	NA	NA	127247874	127244878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_127246275_127247825
tx.8832	chr4	-	1332	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	1	388	1	-388	multi-exon	FALSE	canonical	3	573	junction_1	0	386	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTTTGGGTCT	405	False	NA	NA	False	NA	NA	NA	127251973	127248989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_127250167_127251818
tx.8833	chr4	+	503	4	Antisense	novelGene_ENSMUSG00000079998.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAAGAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	127302457	127318763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr4_+_127302541_127308090_127308205_127311191_127311321_127318586
tx.8834	chr4	+	1742	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	39	0	39	0	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	1221	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2908	False	NA	NA	False	NA	NA	NA	128887055	128905322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
tx.8835	chr4	-	1114	3	NNC	ENSMUSG00000085085.3	novel	1009	2	NA	NA	38	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGACTTACACTTCTTG	NA	False	NA	NA	False	NA	NA	NA	128951738	128943883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_128944703_128944860_128944998_128951580
tx.8836	chr4	+	205	2	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACCCACCAGGGGCTGG	3369	False	NA	NA	False	NA	NA	NA	128996682	129041122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_128996789_129041023
tx.8837	chr4	+	194	2	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACCCACCAATTTCAAA	5258	False	NA	NA	False	NA	NA	NA	129040919	129041346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_129041063_129041295
tx.8838	chr4	-	4202	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	0	5	intron_retention	FALSE	canonical	3	49	junction_5	52.6272995037863	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGGCCGTCTGTTC	1121	False	NA	NA	False	NA	NA	NA	129083402	129041792	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083334
tx.8839	chr4	-	4351	7	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-8	3	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1096	False	NA	NA	False	NA	NA	NA	129083427	129041794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
tx.884	chr10	+	2793	10	FSM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	-2	4	2	-2	multi-exon	FALSE	canonical	3	38	junction_1	48.9166587797331	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCCCTGACTTCTATT	NA	False	NA	NA	False	NA	NA	NA	52109730	52197470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_52109932_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
tx.8840	chr4	+	2395	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	143	371	1	-371	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	542	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	856	False	NA	NA	False	NA	NA	NA	129083695	129113029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
tx.8841	chr4	+	1034	3	ISM	ENSMUSG00000028811.13	ENSMUST00000137591.2	921	6	2638	-573	1572	-371	3prime_fragment	FALSE	canonical	3	1470	junction_2	92.5	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	1343	False	NA	NA	False	NA	NA	NA	129109126	129113029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_129109213_129110470_129110613_129112223
tx.8842	chr4	-	1960	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	33	2414	33	3	multi-exon	TRUE	canonical	3	482	junction_1	226.647613038099	287	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATGCTGGTGGGTTTTA	2525	False	NA	NA	False	NA	NA	NA	129229130	129203306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
tx.8843	chr4	-	857	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	21	3	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATGCTGGTGGGTTTTA	2513	False	NA	NA	False	NA	NA	NA	129229142	129203306	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
tx.8844	chr4	+	724	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	271	2838	-46	0	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	347	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGTAGCAGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	129229758	129240826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
tx.8845	chr4	-	2203	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	113	5	113	-5	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATCTTTTTCGTGACAC	NA	False	NA	NA	False	NA	NA	NA	129271796	129247425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
tx.8846	chr4	+	2694	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	91	38	0	-38	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTTGCCATAACAGCAT	NA	False	NA	NA	False	NA	NA	NA	129355464	129382253	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
tx.8847	chr4	+	2696	10	ISM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	363	0	108	0	3prime_fragment	FALSE	canonical	3	95	junction_2	13.9920612412102	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	False	NA	NA	False	NA	NA	NA	129355736	129382291	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
tx.8848	chr4	+	1427	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	168	10	168	-10	multi-exon	FALSE	canonical	3	8029	junction_1	0	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTCATTGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	129407541	129409768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_129407710_129408509
tx.8849	chr4	-	1985	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	53	0	31	0	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	660	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	8861	False	NA	NA	False	NA	NA	NA	129436453	129409896	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
tx.885	chr10	+	3045	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	7	-977	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	165.410663199202	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGTAGTATGTGAATGT	NA	False	NA	NA	False	NA	NA	NA	52293649	52315302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_52293689_52305288_52305415_52306162_52306313_52309440_52309541_52312672
tx.8850	chr4	-	1618	7	ISM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	1815	5	-98	0	3prime_fragment	FALSE	canonical	3	108	junction_2	13.2214052035158	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACTGCATACTT	NA	False	NA	NA	False	NA	NA	NA	129450350	129442141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080
tx.8851	chr4	-	2210	12	FSM	ENSMUSG00000000409.15	ENSMUST00000067240.11	2185	12	-25	0	-25	0	multi-exon	TRUE	canonical	3	10	junction_9	59.1335510476424	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACTGCATACTT	NA	False	NA	NA	False	NA	NA	NA	129452209	129442141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873
tx.8852	chr4	-	576	6	ISM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	5543	14	663	-14	3prime_fragment	FALSE	canonical	3	1341	junction_3	47.6210037693453	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	2232	False	NA	NA	False	NA	NA	NA	129488898	129485766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851
tx.8853	chr4	-	1089	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	20	14	-12	-14	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	1106	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	6397	False	NA	NA	False	NA	NA	NA	129494421	129485766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
tx.8854	chr4	+	855	4	FSM	ENSMUSG00000028797.21	ENSMUST00000173937.8	756	4	-23	-76	0	15	multi-exon	FALSE	canonical	3	12	junction_2	291.296336323606	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAACAAACAAACAAGA	3164	False	NA	NA	False	NA	NA	NA	129494460	129501685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_129494525_129494775_129495037_129500879_129500973_129501248
tx.8855	chr4	+	1130	6	NIC	ENSMUSG00000028797.21	novel	875	6	NA	NA	-1	15	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	299.030834530488	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAACAAACAAACAAGA	3175	False	NA	NA	False	NA	NA	NA	129494471	129501685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_129494525_129494775_129495037_129495199_129495419_129495987_129496055_129500879_129500973_129501248
tx.8856	chr4	+	1547	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	-21	-7	-1	0	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3175	False	NA	NA	False	NA	NA	NA	129494471	129502321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
tx.8857	chr4	+	1437	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3176	False	NA	NA	False	NA	NA	NA	129494472	129502321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
tx.8858	chr4	+	1371	4	FSM	ENSMUSG00000028797.21	ENSMUST00000174819.8	652	4	-19	-700	-4	-3	multi-exon	FALSE	canonical	3	97	junction_2	255.064697674923	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTTAGCAAATGTTTTA	3172	False	NA	NA	False	NA	NA	NA	129494468	129502318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_129494525_129494775_129494928_129500879_129500973_129501248
tx.8859	chr4	+	964	3	NIC	ENSMUSG00000028797.21	novel	652	4	NA	NA	0	15	intron_retention	FALSE	canonical	3	97	junction_1	312	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAACAAACAAACAAGA	3197	False	NA	NA	False	NA	NA	NA	129494493	129501685	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_129494928_129500879_129500973_129501248
tx.886	chr10	+	1914	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	517	2174	517	-2174	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTCCAGTCACATTAC	NA	False	NA	NA	False	NA	NA	NA	52294159	52314105	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
tx.8860	chr4	+	1766	4	FSM	ENSMUSG00000028797.21	ENSMUST00000174350.8	1124	4	5	-647	0	3	multi-exon	FALSE	canonical	3	284	junction_1	212.397426224205	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCTTAGCAAATGTTTT	3203	False	NA	NA	False	NA	NA	NA	129494499	129502317	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_129495037_129495987_129496055_129500879_129500973_129501248
tx.8861	chr4	+	1658	4	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	325	junction_1	193.096406549221	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3206	False	NA	NA	False	NA	NA	NA	129494502	129502321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_129494928_129495987_129496055_129500879_129500973_129501248
tx.8862	chr4	-	1269	6	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	3	142	combination_of_known_junctions	TRUE	canonical	3	40	junction_1	35.7960891718635	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACGCCTTTAATCCCAG	NA	False	NA	NA	False	NA	NA	NA	129512886	129509409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_129509881_129510753_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
tx.8863	chr4	-	484	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	7	0	7	0	multi-exon	FALSE	canonical	3	28	junction_1	58	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGACTTGTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	129512882	129511891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129512156_129512284_129512429_129512806
tx.8864	chr4	-	827	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	52	0	4	0	multi-exon	FALSE	canonical	3	76	junction_3	6.82934843158555	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCGGTGCTCTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	129517688	129513066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
tx.8865	chr4	-	2492	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	34	2043	34	-2038	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTCCTCAGGTGCCT	7894	False	NA	NA	False	NA	NA	NA	129534824	129521913	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
tx.8866	chr4	-	2210	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	0	3500	0	4	multi-exon	TRUE	canonical	3	106	junction_4	15.2943505832485	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTATGCTTGGAT	8834	False	NA	NA	False	NA	NA	NA	129566560	129541272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
tx.8867	chr4	-	1809	9	FSM	ENSMUSG00000053730.16	ENSMUST00000102588.10	1810	9	1	0	1	0	multi-exon	FALSE	canonical	2	15	junction_6	5.99869777535091	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTGTGTCCTGTGATT	9993	False	NA	NA	False	NA	NA	NA	129590630	129570147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586858_129587079_129587678_129587806_129590507
tx.8868	chr4	-	1892	10	FSM	ENSMUSG00000053730.16	ENSMUST00000125445.8	1851	10	-41	0	1	0	multi-exon	FALSE	canonical	2	5	junction_7	9.25896295822207	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTGTGTCCTGTGATT	9993	False	NA	NA	False	NA	NA	NA	129590630	129570147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586428_129586512_129586858_129587079_129587678_129587806_129590507
tx.8869	chr4	+	455	3	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	24407	1988	5964	1514	3prime_fragment	FALSE	canonical	3	2484	junction_2	109	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAAGGGGATTAATT	NA	False	NA	NA	False	NA	NA	NA	129738907	129741808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_129738986_129740257_129740333_129741506
tx.887	chr10	+	885	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	153	1163	-150	80	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTAATGTGTTATTT	1674	False	NA	NA	False	NA	NA	NA	53473200	53484158	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
tx.8870	chr4	+	792	2	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	5407	False	NA	NA	False	NA	NA	NA	129777962	129779200	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_129778259_129778704
tx.8871	chr4	+	1495	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	57	-1	57	0	multi-exon	FALSE	canonical	3	185	junction_1	25.1047804212664	261	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCTTGACTGTGTGTC	9335	False	NA	NA	False	NA	NA	NA	130001405	130021928	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
tx.8872	chr4	-	1953	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	0	-1	0	1	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCTGGGAGTCTTCAA	NA	False	NA	NA	False	NA	NA	NA	130068595	130059393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
tx.8873	chr4	+	680	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	143	0	143	0	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	2909	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	NA	False	NA	NA	NA	130202530	130209256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
tx.8874	chr4	-	1954	6	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-13	7	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	110.937099295051	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCTGATGCCCCGTAT	NA	False	NA	NA	False	NA	NA	NA	130253749	130209168	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130253668
tx.8875	chr4	-	1549	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-14	376	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCGCTTTCCCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	130253750	130209695	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
tx.8876	chr4	-	1603	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	-11	521	-11	375	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACCGCTTTCCCTTGTA	NA	False	NA	NA	False	NA	NA	NA	130253747	130209696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
tx.8877	chr4	-	1577	6	NIC	ENSMUSG00000028772.20	novel	286	3	NA	NA	-13	1035	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	100.550484832247	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGACATTATTGATT	NA	False	NA	NA	False	NA	NA	NA	130253749	130229613	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_130230738_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
tx.8878	chr4	+	1560	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	31	-7	-31	7	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	1028	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGACTTGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	130253955	130283826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
tx.8879	chr4	+	1116	7	ISM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	8090	-7	5595	7	3prime_fragment	FALSE	canonical	3	1067	junction_4	57.8753449713741	38	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGACTTGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	130262014	130283826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
tx.888	chr10	+	2360	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-17	261	-6	9	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGAGTCGTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	57362474	57388970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
tx.8880	chr4	+	2555	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	6	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	130640441	130663450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662433_130662469
tx.8881	chr4	+	2523	8	FSM	ENSMUSG00000028581.18	ENSMUST00000151698.8	2600	8	75	2	75	-2	multi-exon	FALSE	canonical	3	425	junction_4	26.2071808199702	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	130640510	130663450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
tx.8882	chr4	+	1742	3	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGATTCTTCGTGCCGTT	NA	False	NA	NA	False	NA	NA	NA	131171046	131175677	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_131171168_131173918_131174039_131174176
tx.8883	chr4	+	1338	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	1	-2	1	2	multi-exon	FALSE	canonical	3	105	junction_6	17.6243378301319	85	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCGTGTGGAGGAATG	NA	False	NA	NA	False	NA	NA	NA	131570781	131595099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
tx.8884	chr4	+	1494	2	ISM	ENSMUSG00000028911.17	ENSMUST00000030743.10	3100	6	14887	5	14887	-5	3prime_fragment	FALSE	canonical	3	361	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATTTCACCGCGCTTGA	NA	False	NA	NA	False	NA	NA	NA	131627405	131629012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_131627463_131627575
tx.8885	chr4	-	1540	2	ISM	ENSMUSG00000040025.18	ENSMUST00000102570.5	2536	4	7326	-694	6030	234	3prime_fragment	FALSE	canonical	3	983	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTAGTATTATTTGAGT	5084	False	NA	NA	False	NA	NA	NA	131932090	131913366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_131914259_131931442
tx.8886	chr4	-	2797	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	186	1146	-12	232	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACTTAGTATTATTTGA	NA	False	NA	NA	False	NA	NA	NA	131939428	131913368	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
tx.8887	chr4	-	1857	9	FSM	ENSMUSG00000028901.14	ENSMUST00000030733.9	2485	9	19	609	19	43	multi-exon	FALSE	canonical	3	57	junction_3	6.23372881989584	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGTTGTAACTGCAAATG	3584	False	NA	NA	False	NA	NA	NA	131979144	131952938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985
tx.8888	chr4	-	1907	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	61	-43	-20	43	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGTTGTAACTGCAAATG	1973	False	NA	NA	False	NA	NA	NA	131988852	131952938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
tx.8889	chr4	+	1350	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	0	2437	0	617	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	77	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTGTCCATAGGACCT	NA	False	NA	NA	False	NA	NA	NA	132001685	132020640	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
tx.889	chr10	-	1813	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	12770	0	12649	0	3prime_fragment	FALSE	canonical	3	261	junction_2	34	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	NA	NA	NA	57395856	57391869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_57393389_57395458_57395690_57395793
tx.8890	chr4	+	608	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	-2	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	27.427176303805	320	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	132035986	132038335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
tx.8891	chr4	-	988	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	168.067042016705	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2360	False	NA	NA	False	NA	NA	NA	132056805	132039073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132056663
tx.8892	chr4	-	892	7	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	188.905399605199	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2356	False	NA	NA	False	NA	NA	NA	132056809	132039073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132056663
tx.8893	chr4	-	1100	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	30	0	-4	0	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	149	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2346	False	NA	NA	False	NA	NA	NA	132056819	132039073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
tx.8894	chr4	-	383	3	FSM	ENSMUSG00000085241.8	ENSMUST00000152943.8	437	3	53	1	0	0	multi-exon	FALSE	canonical	3	959	junction_1	21	192	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	132080944	132079244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132079555_132079973_132080010_132080907
tx.8895	chr4	-	802	2	ISM	ENSMUSG00000028896.14	ENSMUST00000155129.2	507	6	-28	14111	-28	-12443	5prime_fragment	FALSE	canonical	3	1001	junction_1	0	148	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	132080944	132079244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_132080010_132080907
tx.8896	chr4	-	1670	3	FSM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	8	-3	8	3	multi-exon	FALSE	canonical	3	250	junction_2	8.5	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATTCTGATTCTTAC	1055	False	NA	NA	False	NA	NA	NA	132191224	132186038	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132187425_132190175_132190320_132191084
tx.8898	chr4	-	3473	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	2	0	2	0	multi-exon	TRUE	canonical	3	666	junction_4	59.9637750728526	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	NA	False	NA	NA	NA	132237810	132219342	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
tx.8899	chr4	-	502	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	33	4	-31	-4	multi-exon	FALSE	canonical	3	7869	junction_2	284	860	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTGATGCCTTCTACT	9274	False	NA	NA	False	NA	NA	NA	132260937	132257869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132258135_132260606_132260699_132260792
tx.89	chr1	+	709	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	63	197	-3	0	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	436	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	37929620	37937419	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
tx.890	chr10	-	2830	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	50	0	-3	0	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	NA	NA	NA	57408576	57391869	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
tx.8900	chr4	+	1385	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	11	5	-6	-5	multi-exon	TRUE	canonical	3	2684	junction_8	233.065676097962	940	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGATGGTCTCCTCCT	2342	False	NA	NA	False	NA	NA	NA	132262871	132281048	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
tx.8901	chr4	+	2498	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	32	2630	-1	0	multi-exon	FALSE	canonical	3	62	junction_15	5.48542101848163	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	NA	False	NA	NA	NA	132366388	132449446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
tx.8902	chr4	-	1821	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	21	2403	3	1206	multi-exon	FALSE	canonical	3	48	junction_1	6.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATGTACCACTAAGTG	4065	False	NA	NA	False	NA	NA	NA	132459836	132454610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132455882_132458186_132458384_132459483
tx.8903	chr4	-	1586	3	FSM	ENSMUSG00000037752.5	ENSMUST00000150104.2	376	3	-4	-1206	-4	1206	multi-exon	FALSE	canonical	3	5	junction_2	21.5	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATGTACCACTAAGTG	4058	False	NA	NA	False	NA	NA	NA	132459843	132454610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132455882_132458186_132458384_132459725
tx.8904	chr4	-	1946	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	57	3	57	-3	multi-exon	FALSE	canonical	3	69	junction_5	8.56666534317997	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAACCGTGAGGGATCAC	NA	False	NA	NA	False	NA	NA	NA	132484506	132460279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
tx.8905	chr4	+	1540	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	4	269	4	-269	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	308	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTGAAATGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	132495649	132505794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
tx.8906	chr4	-	2002	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	35	0	0	0	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	79	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	False	NA	NA	False	NA	NA	NA	132570445	132554239	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
tx.8907	chr4	-	1736	4	ISM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	23883	561	2634	-561	3prime_fragment	FALSE	canonical	3	194	junction_1	12.657891697365	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTATTTTTATGAGTT	NA	False	NA	NA	False	NA	NA	NA	132587937	132581372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854
tx.8908	chr4	-	2328	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	44	562	44	-562	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTTATTTTTATGAGT	6137	False	NA	NA	False	NA	NA	NA	132611776	132581373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
tx.8909	chr4	-	2946	8	FSM	ENSMUSG00000028878.12	ENSMUST00000097856.10	1863	8	-47	-1036	18	-2	multi-exon	FALSE	canonical	3	35	junction_3	31.9367998345712	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGTTGTGATTCAGT	NA	False	NA	NA	False	NA	NA	NA	132649851	132626525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
tx.891	chr10	+	1342	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	104	2881	104	27	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAGGGTAGTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	58159391	58257632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
tx.8910	chr4	-	3014	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	33	6	-32	-6	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATGCATGTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	132649836	132626529	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
tx.8911	chr4	+	772	5	ISM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	31	10561	-4	-1354	5prime_fragment	FALSE	canonical	3	442	junction_3	36.1135362433534	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGAAGGGACCTCTG	NA	False	NA	NA	False	NA	NA	NA	132857846	132916506	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388
tx.8912	chr4	+	1869	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	35	3738	0	-486	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCATATGCTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	132857850	132923329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
tx.8913	chr4	+	919	6	FSM	ENSMUSG00000028865.15	ENSMUST00000105910.2	986	6	64	3	64	-3	multi-exon	FALSE	canonical	3	29	junction_1	9.2736184954957	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTGACCTATGTCTT	NA	False	NA	NA	False	NA	NA	NA	132948184	132951863	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_132948379_132948753_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
tx.8914	chr4	-	1940	15	FSM	ENSMUSG00000028860.14	ENSMUST00000030674.8	1951	15	9	2	9	-2	multi-exon	TRUE	canonical	1	4	junction_9	2.42541812090709	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCTTAACTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	132990415	132980402	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132980620_132980765_132980972_132982843_132982944_132983044_132983124_132983352_132983512_132983798_132983896_132984175_132984343_132984446_132984561_132984727_132984823_132985044_132985133_132986171_132986218_132986292_132986369_132986598_132986748_132988163_132988393_132990297
tx.8915	chr4	-	1470	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	14	0	-8	0	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	133005089	132993355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
tx.8916	chr4	-	1364	5	FSM	ENSMUSG00000028857.17	ENSMUST00000139030.2	546	5	13	-831	-6	0	multi-exon	FALSE	canonical	3	79	junction_4	309.884151740614	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	133005068	132993355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_133004841
tx.8917	chr4	-	3973	16	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-25	-7	combination_of_known_junctions	FALSE	canonical	3	428	junction_6	32.7350305059003	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8965	False	NA	NA	False	NA	NA	NA	133080214	133019776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
tx.8918	chr4	+	1933	4	NIC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	23.3666428910958	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGCCTGGTCATCAG	5475	False	NA	NA	False	NA	NA	NA	133246277	133258099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_133246364_133255050_133256321_133257141_133257217_133257597
tx.8919	chr4	+	1915	4	NIC	ENSMUSG00000037600.17	novel	1699	4	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	21.9544984001001	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGCCTGGTCATCAG	5552	False	NA	NA	False	NA	NA	NA	133246354	133258099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_133246423_133255050_133256321_133257141_133257217_133257597
tx.892	chr10	+	1418	2	ISM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	104	24371	104	-10016	5prime_fragment	FALSE	canonical	3	317	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCCATTTGTGAATTG	NA	False	NA	NA	False	NA	NA	NA	58159391	58236142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_58159510_58234842
tx.8920	chr4	-	1312	8	FSM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	2	2	2	-2	multi-exon	FALSE	canonical	3	2323	junction_4	508.87928082108	1620	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4462	False	NA	NA	False	NA	NA	NA	133273305	133259854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
tx.8921	chr4	+	1363	5	FSM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	3	1	3	-1	multi-exon	FALSE	canonical	3	134	junction_3	14.7394029729837	124	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTTTTTTTAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	133311675	133319045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
tx.8922	chr4	-	1794	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	25	-829	25	829	multi-exon	FALSE	canonical	3	52	junction_1	36	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGGTCTGAATCTTGG	NA	False	NA	NA	False	NA	NA	NA	133399933	133388735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133390103_133397048_133397172_133399629
tx.8923	chr4	-	2139	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	16	1824	16	43	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCCTGGTTGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	133399942	133389521	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
tx.8924	chr4	-	2158	3	ISM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	10	3677	10	-1810	5prime_fragment	FALSE	canonical	3	69	junction_1	27.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGGTTCAATACCATCC	NA	False	NA	NA	False	NA	NA	NA	133399948	133391374	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_133393091_133397048_133397172_133399629
tx.8925	chr4	-	1021	2	ISM	ENSMUSG00000003644.18	ENSMUST00000157067.9	2637	20	23652	-531	12269	0	3prime_fragment	FALSE	canonical	3	1270	junction_1	0	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	133575972	133574604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_133575486_133575832
tx.8926	chr4	-	2150	12	ISM	ENSMUSG00000003644.18	ENSMUST00000157067.9	2637	20	7189	-531	-4082	0	3prime_fragment	FALSE	canonical	3	996	junction_6	94.9394761531335	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	9463	False	NA	NA	False	NA	NA	NA	133592435	133574604	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335
tx.8927	chr4	-	1162	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	94	9	1	-9	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	362	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAATGCTGCCTCTGA	NA	False	NA	NA	False	NA	NA	NA	133695218	133692057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
tx.8928	chr4	-	3122	9	FSM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	16	-5	0	5	multi-exon	FALSE	canonical	1	2	junction_8	23.2025725944344	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTTGTGTGGTAACTG	NA	False	NA	NA	False	NA	NA	NA	133728182	133696362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727651_133728035
tx.8929	chr4	-	3054	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	13	152	-6	-5	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTGCCTCAGAAATTAAG	NA	False	NA	NA	False	NA	NA	NA	133728188	133696490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
tx.893	chr10	+	875	5	ISM	ENSMUSG00000003226.8	ENSMUST00000219332.2	2609	6	-59	3430	-59	-3430	5prime_fragment	FALSE	canonical	3	167	junction_4	13.9283882771841	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTGTGGATCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	58282682	58291391	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040
tx.8930	chr4	-	3593	3	ISM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	363	10	-96	-10	3prime_fragment	FALSE	canonical	3	70	junction_1	3	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTACTGGTCTCTCTGA	8613	False	NA	NA	False	NA	NA	NA	133745789	133730650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_133733633_133735221_133735407_133745363
tx.8931	chr4	-	3526	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	-33	12	-33	-12	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGTACTGGTCTCTCT	8217	False	NA	NA	False	NA	NA	NA	133746185	133730652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
tx.8932	chr4	+	1981	15	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	10283	1	-103	-1	3prime_fragment	FALSE	canonical	3	24	junction_2	42.4615071781106	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGGTGGTCTCGTCTC	NA	False	NA	NA	False	NA	NA	NA	133806045	133819814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
tx.8933	chr4	+	1157	8	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13849	2	-11	1	3prime_fragment	FALSE	canonical	3	103	junction_1	10.7532624380336	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	NA	False	NA	NA	NA	133809611	133819813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
tx.8934	chr4	+	1043	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	39.282806530197	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	NA	False	NA	NA	NA	133809612	133819813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_133809759_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
tx.8935	chr4	+	453	3	FSM	ENSMUSG00000012123.18	ENSMUST00000146102.2	650	3	313	-116	-22	1	multi-exon	FALSE	canonical	3	115	junction_1	3	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	1956	False	NA	NA	False	NA	NA	NA	133818438	133819813	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_133818548_133819360_133819521_133819629
tx.8936	chr4	-	518	2	FSM	ENSMUSG00000000682.8	ENSMUST00000000696.7	514	2	-6	2	-6	-2	multi-exon	FALSE	canonical	3	9	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGGTCCCACGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	133822399	133820848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133821212_133822244
tx.8937	chr4	+	1564	15	FSM	ENSMUSG00000012126.17	ENSMUST00000074690.11	1573	15	10	-1	10	1	multi-exon	TRUE	canonical	3	35	junction_2	24.8785827078437	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTCACAAGGCTCTCC	NA	False	NA	NA	False	NA	NA	NA	133829903	133854088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
tx.8938	chr4	+	1662	8	NNC	ENSMUSG00000012126.17	novel	685	3	NA	NA	-5174	108	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	33.0583899011604	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCCCTGGGTTCC	NA	False	NA	NA	False	NA	NA	NA	133845605	133854195	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_133846239_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
tx.8939	chr4	-	704	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	35	4	-15	3	multi-exon	FALSE	canonical	3	1437	junction_2	42.5	464	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTGTGGTGTCCG	9261	False	NA	NA	False	NA	NA	NA	133856065	133854720	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133855118_133855228_133855397_133855926
tx.894	chr10	+	2152	12	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-28	34596	-28	-34596	5prime_fragment	FALSE	canonical	3	46	junction_9	6.71497647731614	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGATCTTCACCTATTT	915	False	NA	NA	False	NA	NA	NA	58333741	58377470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619
tx.8940	chr4	-	3852	14	FSM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	39	2	12	-2	multi-exon	FALSE	canonical	3	315	junction_5	49.639648211447	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCGGTTTCCTAGTGCC	NA	False	NA	NA	False	NA	NA	NA	133914384	133857170	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
tx.8941	chr4	-	2056	9	ISM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	40	17888	13	4499	5prime_fragment	FALSE	canonical	3	365	junction_5	45.0692175991552	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTATGAGCAGGGAAT	NA	False	NA	NA	False	NA	NA	NA	133914383	133875056	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
tx.8942	chr4	-	635	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	1	1358	1	-1340	multi-exon	FALSE	canonical	3	614	junction_2	27	263	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACCTCCGATACTAACT	7669	False	NA	NA	False	NA	NA	NA	133972902	133971957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_133972242_133972335_133972399_133972614
tx.8943	chr4	-	4505	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	5	-1	2	0	multi-exon	FALSE	canonical	3	58	junction_1	10	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAAAGTTCTCTTGCTA	4296	False	NA	NA	False	NA	NA	NA	134014559	134002312	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_134006428_134011556_134011859_134014471
tx.8945	chr4	+	3173	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-33	13	-8	-6	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATGTGTATGAGTGT	2048	False	NA	NA	False	NA	NA	NA	134070483	134081782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
tx.8946	chr4	+	3103	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	212	-1292	212	1	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGAGTGTTTTGCCT	2796	False	NA	NA	False	NA	NA	NA	134071231	134081789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
tx.8947	chr4	+	3128	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	40	-920	-10	-1	multi-exon	FALSE	canonical	3	35	junction_4	4.79687398208458	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGGCTGGCTTTCTTC	1819	False	NA	NA	False	NA	NA	NA	134123670	134154723	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
tx.8948	chr4	-	1151	2	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTAGTTGACACTCGT	NA	False	NA	NA	False	NA	NA	NA	134163610	134160737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_-_134161794_134163515
tx.8949	chr4	+	1022	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	34	4	34	-4	multi-exon	FALSE	canonical	3	455	junction_1	251.409029273016	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTTTCTGTTCAGG	NA	False	NA	NA	False	NA	NA	NA	134195664	134201150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
tx.895	chr10	+	2478	16	FSM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-23	0	-23	0	multi-exon	FALSE	canonical	3	28	junction_12	10.0598210719674	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGAGTCCCTTCTTT	920	False	NA	NA	False	NA	NA	NA	58333746	58412066	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
tx.8950	chr4	+	1248	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	25	2	25	-2	multi-exon	FALSE	canonical	3	435	junction_2	7.5	191	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTGGTGTCGTGCTT	NA	False	NA	NA	False	NA	NA	NA	134238334	134251236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_134238481_134248782_134248913_134250264
tx.8951	chr4	-	1828	6	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	2514	12	2290	2	3prime_fragment	FALSE	canonical	3	505	junction_1	21.3297913726318	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAATTTTTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	134260065	134252872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937
tx.8952	chr4	-	1878	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	86	5	-3	2	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAATTTTTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	134262612	134252872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
tx.8953	chr4	-	2006	7	FSM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	7	12	-3	2	multi-exon	FALSE	canonical	3	105	junction_6	159.506530691797	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAATTTTTTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	134262572	134252872	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
tx.8954	chr4	-	1898	7	NNC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	178.015604809117	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTTTTCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	134262569	134252870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262499
tx.8955	chr4	-	2675	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	14	3860	14	1162	multi-exon	TRUE	canonical	3	50	junction_1	8.8175960442742	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGAGTATTGCTGGT	NA	False	NA	NA	False	NA	NA	NA	134495321	134472724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
tx.8956	chr4	+	1019	8	NNC	ENSMUSG00000028825.8	novel	1514	10	NA	NA	3683	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.23630588879976	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAAGGTCTCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	134610803	134623483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_134610857_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
tx.8957	chr4	+	1029	7	ISM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	19415	0	4141	0	3prime_fragment	FALSE	canonical	3	15	junction_4	4.69041575982343	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAAGGTCTCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	134611261	134623483	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
tx.8958	chr4	-	1190	7	FSM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	14	0	5	0	multi-exon	FALSE	canonical	3	544	junction_1	61.5938759582116	460	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	NA	False	NA	NA	NA	134642321	134625159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
tx.8959	chr4	-	1259	7	FSM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	2	-542	2	0	multi-exon	FALSE	canonical	3	28	junction_6	233.0748568355	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	NA	False	NA	NA	NA	134642324	134625159	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640573_134642199
tx.896	chr10	-	2220	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	318	-6	318	6	multi-exon	FALSE	canonical	3	22	junction_1	10.8639169436269	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	59057351	58999935	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
tx.8960	chr4	+	1937	2	ISM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	1732	299	-122	0	3prime_fragment	FALSE	canonical	3	913	junction_1	0	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	NA	False	NA	NA	NA	134652634	134654683	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_134654130_134654241
tx.8961	chr4	+	1293	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	68	8	-44	-8	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	534	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGAACAGTGTCTGTAA	NA	False	NA	NA	False	NA	NA	NA	134658276	134664851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
tx.8962	chr4	+	961	4	ISM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	4082	8	3970	-8	3prime_fragment	FALSE	canonical	3	670	junction_2	19.4422220952236	66	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGAACAGTGTCTGTAA	3162	False	NA	NA	False	NA	NA	NA	134662290	134664851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_134662361_134662684_134662776_134663293_134663393_134664150
tx.8963	chr4	-	4071	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	48	0	48	0	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	87	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135000077	134941279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
tx.8964	chr4	-	1163	2	ISM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	30763	-7	2368	0	3prime_fragment	FALSE	canonical	3	1321	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	-75	True	NA	NA	NA	135049792	135047794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_135048766_135049600
tx.8965	chr4	-	3729	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	28	-605	-14	2	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	NA	False	NA	NA	NA	135080527	135047799	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.8966	chr4	-	834	7	ISM	ENSMUSG00000028809.17	ENSMUST00000030613.11	2940	17	-15	18928	0	1450	5prime_fragment	FALSE	canonical	3	1177	junction_2	62.6285344977298	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGAAAAGACTCGAC	NA	False	NA	NA	False	NA	NA	NA	135080462	135068271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.8967	chr4	-	810	5	ISM	ENSMUSG00000028809.17	ENSMUST00000131373.8	619	6	-24	1213	-15	13	5prime_fragment	FALSE	canonical	3	1232	junction_4	48.602983447521	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGCCAGATCATTTGA	NA	False	NA	NA	False	NA	NA	NA	135080477	135070934	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
tx.8968	chr4	+	410	2	Antisense	novelGene_ENSMUSG00000043924.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTGTTGGCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	135095904	135098804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr4_+_135096077_135098566
tx.8969	chr4	-	1829	5	NIC	ENSMUSG00000043924.17	novel	2000	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	5.8309518948453	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTTGTCACCTTGCA	5698	False	NA	NA	False	NA	NA	NA	135125532	135096886	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_135098022_135099187_135099273_135104301_135104385_135107962_135108150_135125193
tx.897	chr10	+	2632	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	-4	290	0	5	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTGGTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	59159185	59207783	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
tx.8970	chr4	-	1325	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	62	2444	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACATGACCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135161072	135143309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
tx.8971	chr4	-	2233	11	ISM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	3449	2618	3332	376	3prime_fragment	FALSE	canonical	2	39	junction_10	10.406248123123	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCAGCTTTCTTCCTGT	7637	False	NA	NA	False	NA	NA	NA	135218485	135178820	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243
tx.8972	chr4	-	2323	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	90	2740	-27	254	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGAGCCTCCTGAAGATC	4278	False	NA	NA	False	NA	NA	NA	135221844	135178942	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
tx.8973	chr4	+	1771	4	ISM	ENSMUSG00000028801.15	ENSMUST00000063707.3	2380	9	29256	102	29256	-102	3prime_fragment	FALSE	canonical	3	11	junction_1	4.02768199119819	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCGGGTTCTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	135252553	135265012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_135252843_135256802_135256969_135260949_135261141_135263887
tx.8974	chr4	-	1391	7	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	21535	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_6	66.8173297547542	17	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	NA	False	NA	NA	NA	135279406	135269198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310
tx.8975	chr4	-	2788	16	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_11	58.2178285025778	9	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	NA	False	NA	NA	NA	135300943	135269198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
tx.8976	chr4	+	2754	3	NNC	ENSMUSG00000086788.3	novel	2963	3	NA	NA	-8279	5	intron_retention	FALSE	canonical	1	2	junction_1	2.5	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAATCATTAAGAAAGGG	7885	False	NA	NA	False	NA	NA	NA	135345686	135357514	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_135345812_135354175_135354357_135355066
tx.8977	chr4	+	3128	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	533.493960186576	58	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4676	False	NA	NA	False	NA	NA	NA	135583412	135593126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
tx.8978	chr4	+	2292	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	551.568369893222	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTGGATTCCTTAG	4676	False	NA	NA	False	NA	NA	NA	135583412	135595690	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590836_135590888_135594436
tx.8979	chr4	-	1655	2	FSM	ENSMUSG00000028675.13	ENSMUST00000180300.2	171	2	52	-1536	52	3	multi-exon	FALSE	canonical	3	373	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTTTATGTAAGTGA	NA	False	NA	NA	False	NA	NA	NA	135600320	135598225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135599766_135600205
tx.898	chr10	+	2334	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	99	9	13	0	multi-exon	FALSE	canonical	2	105	junction_7	32.1836157690049	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGCAAGAGCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	59538397	59699945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
tx.8980	chr4	-	1890	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	21	8	21	-8	multi-exon	FALSE	canonical	3	336	junction_2	18.5	181	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCTAGTACATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	135601140	135598236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135599766_135600205_135600411_135600984
tx.8981	chr4	+	1493	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	10	1022	10	0	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	105	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGGTCAATCTCCCAA	NA	False	NA	NA	False	NA	NA	NA	135648055	135666600	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
tx.8982	chr4	+	1405	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	9	4	-8	-4	multi-exon	FALSE	canonical	3	659	junction_3	79.965617611571	218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCAAACGTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	135673767	135689924	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
tx.8983	chr4	+	1409	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	21	0	-9	0	multi-exon	FALSE	canonical	3	107	junction_1	18.7712546197637	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGATTCTCACAGATGGC	4583	False	NA	NA	False	NA	NA	NA	135691058	135695489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
tx.8984	chr4	-	1604	10	FSM	ENSMUSG00000028670.15	ENSMUST00000067567.5	1626	10	20	2	-3	-2	multi-exon	FALSE	canonical	3	407	junction_1	24.7476149243608	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCTCCCTTATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	135699917	135695536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
tx.8985	chr4	-	1682	9	NIC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	-3	0	intron_retention	TRUE	canonical	3	428	junction_2	20.3127884594902	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCCTTATGTGGTACA	NA	False	NA	NA	False	NA	NA	NA	135699917	135695534	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
tx.8986	chr4	-	2719	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	64	1925	64	-1925	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGGTTTTTTGTTTTT	7768	False	NA	NA	False	NA	NA	NA	135749010	135732603	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
tx.8987	chr4	-	1401	4	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	105	6912	105	-6912	5prime_fragment	FALSE	canonical	3	140	junction_3	7.93025150224688	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAGAGAAGTTGCAGCC	7809	False	NA	NA	False	NA	NA	NA	135748969	135737590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_135738720_135740180_135740288_135741710_135741768_135748861
tx.8988	chr4	-	1448	5	FSM	ENSMUSG00000059291.16	ENSMUST00000125726.8	807	5	-355	-286	42	27	multi-exon	FALSE	canonical	3	383	junction_1	4361.44284469027	61	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGGACAATGTCCCAG	NA	False	NA	NA	False	NA	NA	NA	135780662	135777014	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877
tx.8989	chr4	-	617	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	0	216	0	0	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	1927	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	135780704	135777257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
tx.899	chr10	+	1646	3	ISM	ENSMUSG00000020111.16	ENSMUST00000167872.8	4699	4	55	10500	0	-6362	5prime_fragment	FALSE	canonical	3	180	junction_2	29.5	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATATACTGAATTTGTGA	NA	False	NA	NA	False	NA	NA	NA	59538439	59570218	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_59538510_59563778_59563941_59568804
tx.8990	chr4	+	2490	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	50	3	24	-3	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTATTTCAAATTCAAT	NA	False	NA	NA	False	NA	NA	NA	136038302	136067989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
tx.8991	chr4	+	1193	9	ISM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	39	1432	13	-24	5prime_fragment	FALSE	canonical	3	289	junction_1	98.149678425352	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGAGCGCCAAG	NA	False	NA	NA	False	NA	NA	NA	136038291	136066560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486
tx.8992	chr4	+	911	3	ISM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	2	8244	2	408	5prime_fragment	FALSE	canonical	3	86	junction_2	41.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAAGAAAATGAGAAAA	4159	False	NA	NA	False	NA	NA	NA	136197073	136268386	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_136197162_136248651_136248755_136267666
tx.8993	chr4	+	1387	2	FSM	ENSMUSG00000001089.15	ENSMUST00000142248.2	418	2	-6	-963	-6	963	multi-exon	FALSE	canonical	3	169	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	4193	False	NA	NA	False	NA	NA	NA	136197107	136249984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_136197162_136248651
tx.8994	chr4	-	2077	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	24	7	3	-7	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	959	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGAGCCTGAAGGTTAT	NA	False	NA	NA	False	NA	NA	NA	137085007	137047013	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
tx.8997	chr4	+	2108	10	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	901	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	31.0304509939654	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	NA	False	NA	NA	NA	137447083	137457172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
tx.8998	chr4	+	1939	10	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	12389	0	1039	0	3prime_fragment	TRUE	canonical	3	83	junction_7	18.9326290948839	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	NA	False	NA	NA	NA	137447221	137457172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
tx.8999	chr4	+	1749	9	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	12876	0	1526	0	3prime_fragment	FALSE	canonical	3	83	junction_6	18.2512842013925	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	NA	False	NA	NA	NA	137447708	137457172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
tx.9	chr1	-	1950	3	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	1	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAACTAGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	9615434	9613140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr1_-_9614799_9615067_9615264_9615338
tx.90	chr1	-	1079	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	98	2204	7	1	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	521	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATGTCTGTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	38036298	38026473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
tx.900	chr10	+	1974	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	23	1073	-20	209	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTCTCCAGGCTTAT	NA	False	NA	NA	False	NA	NA	NA	59715419	59734045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
tx.9000	chr4	+	1780	9	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	1526	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	32.289462290351	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	NA	False	NA	NA	NA	137447708	137457172	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
tx.9001	chr4	-	1624	6	ISM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	46700	-1	-2537	1	3prime_fragment	FALSE	canonical	3	1473	junction_1	83.0262609058122	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGAGTCTTTGTGGTCA	NA	False	NA	NA	False	NA	NA	NA	137476995	137469042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859
tx.9002	chr4	-	2473	12	FSM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	45	4	45	-4	multi-exon	FALSE	canonical	3	1320	junction_11	106.491531498949	235	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGAGCTGAGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	137523650	137469047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
tx.9003	chr4	-	1685	7	ISM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	43775	4	-5462	-4	3prime_fragment	FALSE	canonical	3	1473	junction_1	86.9241367834939	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGAGCTGAGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	137479920	137469047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862
tx.9004	chr4	+	3273	13	FSM	ENSMUSG00000028759.14	ENSMUST00000030541.13	3311	13	14	24	6	-2	multi-exon	FALSE	canonical	3	41	junction_1	22.3320895176027	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGAACTACAGCTTAG	4579	False	NA	NA	False	NA	NA	NA	137943951	137970457	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
tx.9005	chr4	+	1988	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	115	17	115	-17	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	307	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGCTCTAGGTCCTAT	NA	False	NA	NA	False	NA	NA	NA	138032155	138039922	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
tx.9006	chr4	+	1356	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	20	2357	14	897	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	143	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCCTCTCCGACTCT	NA	False	NA	NA	False	NA	NA	NA	138162001	138167219	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
tx.9007	chr4	+	668	3	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	52	junction_1	9.5	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTATATCTTTTCTGA	4290	False	NA	NA	False	NA	NA	NA	138225891	138255983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_138226002_138226562_138226737_138255599
tx.9008	chr4	+	1723	2	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTATCTATGTTTGAG	8847	False	NA	NA	False	NA	NA	NA	138259320	138261333	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_138259476_138259765
tx.9009	chr4	+	502	2	Antisense	novelGene_ENSMUSG00000043621.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGCATATGGGTGTTT	8425	False	NA	NA	False	NA	NA	NA	138434163	138439070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr4_+_138434391_138438795
tx.901	chr10	+	1919	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	44	1078	-18	210	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTCCAGGCTTATG	NA	False	NA	NA	False	NA	NA	NA	59715421	59734046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
tx.9010	chr4	-	2147	6	FSM	ENSMUSG00000041193.16	ENSMUST00000030524.14	2131	6	-18	2	-5	-2	multi-exon	FALSE	canonical	3	70	junction_2	8.52291030106501	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCACATGTTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	138590798	138526561	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480
tx.9011	chr4	+	3013	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	305	0	301	0	multi-exon	FALSE	canonical	3	56	junction_1	8.00780868902348	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	138700520	138786478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
tx.9012	chr4	-	509	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	72	1968	-47	9	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	1893	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCCTTTATTCCTTTA	5251	False	NA	NA	False	NA	NA	NA	138858352	138831092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
tx.9013	chr4	+	1646	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	28	0	3	0	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	1619	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	False	NA	NA	False	NA	NA	NA	138920237	139019129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
tx.9014	chr4	+	1397	7	ISM	ENSMUSG00000028745.19	ENSMUST00000042675.9	1604	9	23935	-35	23935	0	3prime_fragment	FALSE	canonical	3	1491	junction_4	98.2982988436502	266	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	916	False	NA	NA	False	NA	NA	NA	138984628	139019129	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
tx.9015	chr4	-	1512	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	23	-3	0	3	multi-exon	FALSE	canonical	3	103	junction_8	18.155147341732	100	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTCTGCTGCTCCTT	NA	False	NA	NA	False	NA	NA	NA	139037996	139025835	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
tx.9016	chr4	+	1284	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	4	0	4	0	multi-exon	FALSE	canonical	3	253	junction_5	35.9787746070127	138	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTCTCCTCTGCTGCCC	NA	False	NA	NA	False	NA	NA	NA	139038058	139045737	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
tx.9017	chr4	-	1156	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	58	7	15	3	multi-exon	FALSE	canonical	3	786	junction_5	119.708489460771	760	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTCTTTTTTTTTTT	5754	False	NA	NA	False	NA	NA	NA	139079829	139074752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
tx.9018	chr4	+	3398	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	-1	1309	0	0	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCTCTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	139079919	139103238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
tx.9019	chr4	+	3159	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	220	3	-23	0	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATTTTGATCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	139350396	139376998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
tx.902	chr10	-	1756	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	721	junction_1	4.5	136	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCTCATCGGCGCCA	NA	False	NA	NA	False	NA	NA	NA	59787657	59785490	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_59786852_59787138_59787395_59787518
tx.9020	chr4	+	2340	6	ISM	ENSMUSG00000028737.16	ENSMUST00000146309.8	4142	15	19012	0	18797	0	intron_retention	FALSE	canonical	3	214	junction_5	20.5659913449364	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATTTTGATCGTGTGT	5609	False	NA	NA	False	NA	NA	NA	139369216	139376998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
tx.9021	chr4	-	614	5	NNC	ENSMUSG00000040972.9	novel	1979	10	NA	NA	213909	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	38.4016601203646	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAATGTCTGGCCCTATA	NA	False	NA	NA	False	NA	NA	NA	139760186	139754162	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139760117
tx.9022	chr4	+	676	2	ISM	ENSMUSG00000087084.2	ENSMUST00000126252.2	1720	3	-189	3088	-189	-3088	5prime_fragment	FALSE	canonical	3	28	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTTTTTGGCTGGGG	NA	False	NA	NA	False	NA	NA	NA	140107751	140109797	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_140108031_140109400
tx.9023	chr4	-	900	4	ISM	ENSMUSG00000040935.13	ENSMUST00000038749.11	2333	16	11517	3	1917	-3	intron_retention	FALSE	canonical	3	19	junction_1	1.24721912892465	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTTTTTACGCCGCCT	NA	False	NA	NA	False	NA	NA	NA	140458437	140454668	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_140455121_140456177_140456340_140457019_140457091_140458222
tx.9024	chr4	-	2561	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-60	-185	-60	185	multi-exon	TRUE	canonical	3	76	junction_4	15.9114214743163	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCACGGCTGGCAAGAT	NA	False	NA	NA	False	NA	NA	NA	140501607	140472990	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
tx.9025	chr4	+	1245	2	NNC	ENSMUSG00000085918.2	novel	2001	3	NA	NA	3400	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	13	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTATGTGTATGGGTG	NA	False	NA	NA	False	NA	NA	NA	140541703	140544816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_140542139_140544006
tx.9026	chr4	+	965	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	177	0	-21	0	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	2142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	140688690	140706504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
tx.9027	chr4	-	1879	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	25	2	10	-2	multi-exon	TRUE	canonical	3	362	junction_3	45.6883855200484	218	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCAGATGGATATGTTT	8510	False	NA	NA	False	NA	NA	NA	140805643	140793824	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
tx.9028	chr4	-	3283	4	NNC	ENSMUSG00000040842.18	novel	428	4	NA	NA	-2	-17	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	90.1369328669812	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACATTTGTCCTCATTT	NA	False	NA	NA	False	NA	NA	NA	140867079	140840328	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_140843176_140843847_140843952_140845837_140846093_140867002
tx.9029	chr4	-	935	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	-3	2312	-3	1254	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140867080	140842623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
tx.903	chr10	-	1331	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	22	499	-2	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	347	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	59838935	59823729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
tx.9030	chr4	-	884	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	7	2312	-2	1254	multi-exon	FALSE	canonical	3	212	junction_2	123	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140867079	140842623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_140843176_140845837_140846093_140867002
tx.9031	chr4	+	2654	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	19	3261	10	-3261	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTGGTCTTAGTGGA	NA	False	NA	NA	False	NA	NA	NA	140875242	140928112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
tx.9032	chr4	+	1169	6	FSM	ENSMUSG00000073733.5	ENSMUST00000097813.3	985	6	9	-193	9	193	multi-exon	FALSE	canonical	2	5	junction_2	1.26491106406735	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAACCTCCCTTGTAGCC	NA	False	NA	NA	False	NA	NA	NA	140941275	140947652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_140941375_140941633_140941784_140944562_140944716_140945415_140945541_140945848_140945986_140947147
tx.9033	chr4	+	1358	5	ISM	ENSMUSG00000028919.12	ENSMUST00000006618.9	3414	17	8065	0	4008	0	3prime_fragment	FALSE	canonical	3	59	junction_1	6.67083203206317	12	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTAGCATCTGCTTC	842	False	NA	NA	False	NA	NA	NA	140978244	140984875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
tx.9034	chr4	+	1235	5	ISM	ENSMUSG00000006218.5	ENSMUST00000006380.5	1433	7	12077	-1	12077	1	3prime_fragment	FALSE	canonical	3	37	junction_3	8.98262211161084	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGACCTGGTCTTCC	505	False	NA	NA	False	NA	NA	NA	141107607	141111487	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_141107666_141107912_141108007_141109637_141109821_141110054_141110166_141110698
tx.9035	chr4	-	1307	6	ISM	ENSMUSG00000033770.14	ENSMUST00000105790.8	2511	19	8314	0	4937	0	3prime_fragment	FALSE	canonical	3	33	junction_5	1.6	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTTCACCCATCTTC	NA	False	NA	NA	False	NA	NA	NA	141117201	141111920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_141112260_141112587_141112675_141114383_141114468_141114599_141114689_141115444_141115579_141116627
tx.9036	chr4	-	972	7	ISM	ENSMUSG00000033770.14	ENSMUST00000105790.8	2511	19	8103	0	4726	0	3prime_fragment	FALSE	canonical	3	15	junction_6	7.88810637746615	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTTCACCCATCTTC	NA	False	NA	NA	False	NA	NA	NA	141117412	141111920	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_141112260_141112587_141112675_141114383_141114468_141114599_141114689_141115444_141115579_141116627_141116842_141117387
tx.9037	chr4	-	1177	6	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7704	4	-2953	-4	intron_retention	FALSE	canonical	3	74	junction_3	20.1454709550311	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4182	False	NA	NA	False	NA	NA	NA	141135621	141131667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114
tx.9038	chr4	-	931	7	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7662	4	-2995	-4	3prime_fragment	FALSE	canonical	3	53	junction_6	23.8146780135464	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4140	False	NA	NA	False	NA	NA	NA	141135663	141131667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135616
tx.9039	chr4	-	939	2	FSM	ENSMUSG00000070637.3	ENSMUST00000094544.3	905	2	-36	2	-36	-2	multi-exon	FALSE	canonical	3	14	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAAGGGAGTCTGACCT	NA	False	NA	NA	False	NA	NA	NA	141163452	141159984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_141160768_141163296
tx.904	chr10	-	1376	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	-2	5	-2	-5	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGATCGCTGTGCGTAT	NA	False	NA	NA	False	NA	NA	NA	59838935	59823734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
tx.9040	chr4	+	2698	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	28	-4	-2	4	multi-exon	TRUE	canonical	3	129	junction_3	19.5436832648187	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	NA	False	NA	NA	NA	141171992	141194540	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
tx.9041	chr4	+	664	3	ISM	ENSMUSG00000006215.13	ENSMUST00000130482.2	867	7	953	-157	953	1	3prime_fragment	FALSE	canonical	3	182	junction_1	5.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTGTGGTCCCTGTGT	6	True	NA	NA	False	NA	NA	NA	141193678	141194537	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_141193869_141193984_141194075_141194153
tx.9042	chr4	-	2962	8	ISM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	2273	0	518	0	3prime_fragment	FALSE	canonical	3	1168	junction_5	184.331002187226	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	141323262	141303372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205
tx.9043	chr4	-	3070	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	141325535	141303372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
tx.9044	chr4	-	3010	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	26	0	-10	0	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	141327209	141303372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
tx.9045	chr4	-	3067	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	141327364	141303372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
tx.9047	chr4	-	1475	6	FSM	ENSMUSG00000043085.15	ENSMUST00000053263.9	1671	6	196	0	-61	0	multi-exon	FALSE	canonical	3	57	junction_2	22.4535075210979	34	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	NA	False	NA	NA	NA	141345353	141341543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
tx.9048	chr4	-	2492	6	ISM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	22842	1801	6604	-1801	3prime_fragment	TRUE	canonical	3	45	junction_4	2.57681974534502	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCAGGCTTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	141495360	141489300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201
tx.9049	chr4	+	2148	9	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	17	658	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	54.6601717432355	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTTAGCCTGTATTGT	NA	False	NA	NA	False	NA	NA	NA	141521037	141541656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
tx.905	chr10	+	1464	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	-14	0	-14	0	multi-exon	FALSE	canonical	3	221	junction_7	12.5797456254091	157	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	59838646	59935808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
tx.9050	chr4	+	1493	9	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-50	2315	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	62.3326509543754	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCAAGGCCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	141521104	141545602	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141545442
tx.9051	chr4	+	2075	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	191	1631	-41	658	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTTAGCCTGTATTGT	NA	False	NA	NA	False	NA	NA	NA	141521113	141541656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
tx.9052	chr4	-	672	3	FSM	ENSMUSG00000058579.6	ENSMUST00000127962.2	468	3	-204	0	-204	0	multi-exon	FALSE	canonical	3	93	junction_1	12.5	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	331	False	NA	NA	False	NA	NA	NA	141546717	141542272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_141542367_141545175_141545329_141546292
tx.9053	chr4	-	1719	3	ISM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	13071	198	13071	-198	3prime_fragment	FALSE	canonical	3	474	junction_2	38.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTATGTGTGTGTGGT	9077	False	NA	NA	False	NA	NA	NA	141589160	141585650	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_141587190_141587858_141587994_141589115
tx.9054	chr4	-	1299	2	ISM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	46704	0	46704	0	3prime_fragment	FALSE	canonical	3	181	junction_1	0	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	NA	False	NA	NA	False	NA	NA	NA	141764911	141758302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_141759406_141764715
tx.9055	chr4	-	1815	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	60	0	60	0	multi-exon	FALSE	canonical	3	173	junction_2	4	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9860	False	NA	NA	False	NA	NA	NA	141811555	141758302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_141759406_141764715_141765245_141811372
tx.9056	chr4	-	1776	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	57	-16	-44	16	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCCATTGACTTTAGAT	NA	False	NA	NA	False	NA	NA	NA	143026077	142993984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
tx.9057	chr4	-	1314	4	ISM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	25507	-9	25406	9	3prime_fragment	FALSE	canonical	3	463	junction_2	12.0277457017791	90	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACACTTCCATTGAC	NA	False	NA	NA	False	NA	NA	NA	143000627	142993991	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469
tx.9058	chr4	+	3499	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-242	3	-227	-3	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGTTTCACTTCCT	NA	False	NA	NA	False	NA	NA	NA	143139314	143147658	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
tx.9059	chr4	+	2664	4	NNC	ENSMUSG00000078508.2	novel	1745	3	NA	NA	-3300	784	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	5.90668171555645	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTATTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	144053518	144060819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_144053628_144056792_144057106_144057681_144058255_144059150
tx.906	chr10	+	1028	7	ISM	ENSMUSG00000044475.15	ENSMUST00000164083.4	1473	11	10291	2	10291	0	3prime_fragment	FALSE	canonical	3	221	junction_3	9.11805291105995	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	59849439	59935808	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
tx.9060	chr4	+	2483	3	FSM	ENSMUSG00000078508.2	ENSMUST00000105751.2	1745	3	46	-784	46	784	multi-exon	FALSE	canonical	3	38	junction_1	0.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTATTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	144056864	144060819	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_144057106_144057681_144058255_144059150
tx.9061	chr4	+	1357	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	410	570	268	0	multi-exon	FALSE	canonical	3	137	junction_1	25.4982352330509	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCCTTCGTTCACGT	6356	False	NA	NA	False	NA	NA	NA	144620056	144654209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
tx.9062	chr4	-	444	2	Genic_Genomic	ENSMUSG00000084279.2	novel	632	1	NA	NA	-14886	372	multi-exon	TRUE	canonical	0	0	junction_1	0	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATCATGAAGTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	145471668	145455778	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr4_-_145456204_145471649
tx.9063	chr4	+	686	6	Fusion	ENSMUSG00000084350.2_ENSMUSG00000094417.2	novel	2413	3	NA	NA	-55	-2021	multi-exon	FALSE	canonical	2	3	junction_4	108.584713472938	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	145501233	145554491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
tx.9064	chr4	+	3966	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43786	1174	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.466693855354	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGCAATTATGTCCATC	NA	False	NA	NA	False	NA	NA	NA	145508020	145557686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_145508210_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256
tx.9065	chr4	+	704	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	272.465337244942	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	146500227	146550672	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
tx.9068	chr4	-	2611	5	FSM	ENSMUSG00000066000.13	ENSMUST00000105720.8	2594	5	-17	0	-17	0	multi-exon	FALSE	canonical	3	24	junction_4	194.219592214586	42	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	147726987	147696393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791
tx.9069	chr4	-	2583	5	FSM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	-23	-2	-18	0	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	155	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	147726988	147696393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
tx.907	chr10	+	2624	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	26	-4	25	1	multi-exon	FALSE	canonical	3	864	junction_6	81.2601199887849	368	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	7015	False	NA	NA	False	NA	NA	NA	60113474	60138377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
tx.9070	chr4	-	2574	4	NIC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	106.377733676847	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	8382	False	NA	NA	False	NA	NA	NA	147860281	147838430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_147840693_147842158_147842286_147845677_147845736_147860154
tx.9071	chr4	-	693	4	FSM	ENSMUSG00000059423.14	ENSMUST00000105718.8	4238	4	-52	3597	-52	164	multi-exon	FALSE	canonical	3	42	junction_2	6.37704215656966	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATGAATGCAATCAGTG	3889	False	NA	NA	False	NA	NA	NA	147932875	147911039	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_147911404_147912866_147912928_147913126_147913254_147932734
tx.9072	chr4	-	1532	10	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	73.7735942588982	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTCTCCATGTAAGCC	NA	False	NA	NA	False	NA	NA	NA	147952979	147945246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
tx.9073	chr4	-	1932	9	FSM	ENSMUSG00000029022.19	ENSMUST00000156374.9	1909	9	-23	0	1	0	multi-exon	FALSE	canonical	3	219	junction_8	23.8995292840675	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	NA	False	NA	NA	NA	147952979	147945247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
tx.9074	chr4	-	1625	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	175	13	-21	0	multi-exon	FALSE	canonical	3	210	junction_4	26.1538657058192	58	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	NA	False	NA	NA	NA	147953001	147945247	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
tx.9075	chr4	+	2162	2	Genic_Genomic	ENSMUSG00000070583.2	novel	1380	1	NA	NA	-141	1937	multi-exon	FALSE	canonical	2	4	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGGTTAAATCTGGGC	NA	False	NA	NA	False	NA	NA	NA	147953294	147956752	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr4_+_147953605_147954900
tx.9076	chr4	-	2483	16	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	5540	307	5481	-307	3prime_fragment	FALSE	canonical	3	68	junction_3	12.7899265917449	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGAGATGCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	148015684	147994516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578
tx.9077	chr4	-	2936	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	0	307	0	-307	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGAGATGCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	148021224	147994516	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
tx.9078	chr4	+	672	3	FSM	ENSMUSG00000029019.9	ENSMUST00000103231.5	781	3	109	0	109	0	multi-exon	FALSE	canonical	3	7	junction_1	1	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTCCGTGAGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	148070353	148071662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_148070559_148070752_148070976_148071418
tx.9079	chr4	-	1128	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	15	2853	15	603	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	632	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGTCTTGGTATGAT	NA	False	NA	NA	False	NA	NA	NA	148172473	148164370	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
tx.908	chr10	+	815	4	FSM	ENSMUSG00000020098.8	ENSMUST00000020298.8	789	4	-25	-1	3	1	multi-exon	FALSE	canonical	3	60	junction_3	1.24721912892465	33	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTTCTAGAACCTTCT	NA	False	NA	NA	False	NA	NA	NA	60925112	60930104	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_60925196_60927842_60927975_60928382_60928464_60929585
tx.9080	chr4	+	1220	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	315	0	-227	0	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	246	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGAACATGTGTATCG	NA	False	NA	NA	False	NA	NA	NA	148224953	148230156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
tx.9081	chr4	+	1153	8	FSM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	-206	2	-187	-2	multi-exon	FALSE	canonical	3	65	junction_6	213.795439137317	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAGGATGAACATGTG	NA	False	NA	NA	False	NA	NA	NA	148224993	148230151	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
tx.9082	chr4	-	1172	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	174	0	-93	0	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	71	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	NA	False	NA	NA	NA	148236196	148230243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
tx.9083	chr4	-	1113	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	51	-1	51	0	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	NA	False	NA	NA	NA	148236465	148230243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
tx.9084	chr4	-	1168	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	1	71	1	0	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	241	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	NA	False	NA	NA	NA	148236591	148230243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
tx.9085	chr4	-	1652	6	FSM	ENSMUSG00000029001.16	ENSMUST00000057907.10	1829	6	179	-2	-27	-1	multi-exon	FALSE	canonical	3	37	junction_4	3.00665927567458	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	148244361	148237257	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
tx.9086	chr4	+	1316	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	-35	7	-35	-7	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGACGCACAGATGAAT	NA	False	NA	NA	False	NA	NA	NA	148245042	148250874	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
tx.9087	chr4	-	2466	3	NNC	ENSMUSG00000047719.3	novel	576	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	31.5	5	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	148529217	148518951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_-_148521100_148528384_148528587_148529101
tx.9088	chr4	-	2981	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	11	0	1	0	multi-exon	FALSE	canonical	3	93	junction_1	0	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	148529217	148518951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_148521100_148528384
tx.9089	chr4	+	1036	5	FSM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	-33	0	-19	0	multi-exon	FALSE	canonical	3	142	junction_1	19.0656759649376	61	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGCCTCTGACTATGG	NA	False	NA	NA	False	NA	NA	NA	148533048	148539430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008
tx.909	chr10	-	2791	4	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	44368	0	-151	0	3prime_fragment	FALSE	canonical	3	403	junction_2	21.0449254902195	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	60939055	60934420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899
tx.9090	chr4	+	2773	25	FSM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	13	4	11	4	multi-exon	TRUE	canonical	3	466	junction_4	49.4747234847138	97	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGATGGTTCTTGGTTGG	NA	False	NA	NA	False	NA	NA	NA	148642898	148666854	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
tx.9091	chr4	+	907	5	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	991	14	576	-14	3prime_fragment	FALSE	canonical	3	3072	junction_4	109.529676343902	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGACCTCTGACCTTTT	9707	False	NA	NA	False	NA	NA	NA	148676950	148679062	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
tx.9092	chr4	+	776	5	FSM	ENSMUSG00000028979.18	ENSMUST00000105701.9	738	5	-36	-2	-36	2	multi-exon	FALSE	canonical	2	14	junction_1	7.49583217528247	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTGTGTGTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	148686974	148688876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_148687048_148687124_148687354_148687448_148687627_148688143_148688276_148688712
tx.9093	chr4	-	829	2	FSM	ENSMUSG00000041459.16	ENSMUST00000147391.3	1011	2	105	77	105	3	multi-exon	FALSE	canonical	3	409	junction_1	0	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	NA	False	NA	NA	NA	148702719	148701169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_148701302_148702022
tx.9094	chr4	-	2171	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	NA	False	NA	NA	NA	148711222	148701169	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
tx.9095	chr4	-	1198	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	279	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGGATTCATCACCTG	NA	False	NA	NA	False	NA	NA	NA	148711222	148701174	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
tx.9096	chr4	-	1894	7	ISM	ENSMUSG00000041459.16	ENSMUST00000191450.7	1304	8	-7	138	0	0	5prime_fragment	FALSE	canonical	3	29	junction_1	398.417285434924	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	NA	NA	NA	148711222	148701319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_148702283_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
tx.9097	chr4	-	2743	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	253	4481	-1	0	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	128	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	NA	NA	NA	148711223	148701319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
tx.9098	chr4	+	2456	6	FSM	ENSMUSG00000028974.14	ENSMUST00000030816.4	2457	6	5	-4	5	4	multi-exon	FALSE	canonical	3	30	junction_2	2.13541565040626	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCTTTGTTTGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	149188607	149205108	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
tx.9099	chr4	-	832	5	FSM	ENSMUSG00000073705.11	ENSMUST00000177408.2	689	5	-29	-114	-21	114	multi-exon	FALSE	canonical	3	47	junction_3	159.066809863026	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGTGGCTTCAGGTC	NA	False	NA	NA	False	NA	NA	NA	149222055	149212882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216734_149216840_149221932
tx.91	chr1	-	1033	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	667	-1	-2	1	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATGTCTGTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	38036307	38026473	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
tx.910	chr10	-	4054	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	16	0	-6	0	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	60983437	60934420	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
tx.9100	chr4	-	835	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	46	229	-6	113	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	92	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTGTGGCTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	149222040	149212883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
tx.9101	chr4	-	1574	7	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	8622	2	1914	-2	3prime_fragment	FALSE	canonical	3	350	junction_6	12.979684981625	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	4779	False	NA	NA	False	NA	NA	NA	149242542	149234449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417
tx.9102	chr4	-	2180	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	36	2	-11	-2	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	332	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	149251128	149234449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
tx.9103	chr4	-	1027	2	FSM	ENSMUSG00000028960.21	ENSMUST00000173005.2	621	2	-401	-5	14	5	multi-exon	FALSE	canonical	3	264	junction_1	0	19	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTCTGTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	149511074	149482951	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_149483243_149510338
tx.9104	chr4	-	1187	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	9	42	9	-2	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAACAGCTCAGTCACT	1661	False	NA	NA	False	NA	NA	NA	149569646	149553057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
tx.9105	chr4	+	1298	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	41	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	149569685	149581125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
tx.9106	chr4	+	1579	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	27	0	intron_retention	FALSE	canonical	3	32	junction_1	58.2405287035881	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	149569723	149581125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_149570050_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
tx.9107	chr4	+	1816	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	1	0	1	0	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	149569751	149581125	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
tx.9108	chr4	-	3086	3	FSM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	6	0	-6	0	multi-exon	FALSE	canonical	3	59	junction_1	6.5	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCGAGTCCTTTCGTGC	NA	False	NA	NA	False	NA	NA	NA	150039494	149980739	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_149982799_149990872_149991715_150039309
tx.911	chr10	+	726	3	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	20	junction_1	1	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACCTGTCTCTGCCTCCC	NA	False	NA	NA	False	NA	NA	NA	61252089	61253446	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_+_61252425_61252865_61252988_61253177
tx.9110	chr4	-	1475	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTACTATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	150282942	150271471	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
tx.9111	chr4	+	1766	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	255	6	-33	0	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	286	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	NA	False	NA	NA	NA	150321663	150333330	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
tx.9112	chr4	+	3045	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	0	-2	0	2	multi-exon	FALSE	canonical	3	303	junction_2	19.3275853524323	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTCTTGTCTAAACT	3781	False	NA	NA	False	NA	NA	NA	150939529	150953346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
tx.9113	chr4	-	845	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	63	0	5	0	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	2610	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	150994320	150981589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
tx.9114	chr4	-	2124	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	-8	4	2	-4	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	45	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCGTGTTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	151142418	151131760	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
tx.9115	chr4	-	596	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-34	1636	0	20	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGTTTAATGAGTACAT	NA	False	NA	NA	False	NA	NA	NA	151946195	151876666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
tx.9116	chr4	-	518	3	FSM	ENSMUSG00000014592.22	ENSMUST00000135780.2	506	3	3	-15	3	15	multi-exon	FALSE	canonical	3	63	junction_2	493.5	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTTAAGTTTAATGAG	NA	False	NA	NA	False	NA	NA	NA	151946192	151876671	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_151876960_151914874_151914994_151946081
tx.9117	chr4	+	2204	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	35	912	-5	-2	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	143	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGGAAACTAGTCTC	9105	False	NA	NA	False	NA	NA	NA	152018182	152065682	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
tx.9118	chr4	+	1900	13	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	23410	915	-42	0	3prime_fragment	FALSE	canonical	3	755	junction_4	61.9327592366646	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGGTTTGGAAACTAGT	2195	False	NA	NA	False	NA	NA	NA	152041557	152065679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
tx.9119	chr4	-	1115	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	10	-1	-7	1	multi-exon	FALSE	canonical	3	153	junction_2	10.8730042868667	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTGTCACTCGGTTA	NA	False	NA	NA	False	NA	NA	NA	152073444	152067094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
tx.912	chr10	+	1784	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	311	0	311	0	multi-exon	FALSE	canonical	3	289	junction_2	2.5	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	61254061	61261117	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_61254275_61258760_61259477_61260262
tx.9120	chr4	-	1023	3	FSM	ENSMUSG00000039759.11	ENSMUST00000105665.3	832	3	-27	-164	0	1	multi-exon	FALSE	canonical	3	60	junction_1	59.5	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTGTCACTCGGTTA	NA	False	NA	NA	False	NA	NA	NA	152073454	152067094	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_152067810_152070125_152070319_152073339
tx.9121	chr4	-	2228	11	FSM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	-10	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	11.2782977438973	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTCTGTTCCTTGG	8669	False	NA	NA	False	NA	NA	NA	152112128	152104230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
tx.9122	chr4	-	943	3	ISM	ENSMUSG00000028952.13	ENSMUST00000155389.8	2312	10	-10	6104	0	600	5prime_fragment	FALSE	canonical	3	24	junction_2	6.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGCCCACTGACAGCAGA	8669	False	NA	NA	False	NA	NA	NA	152112128	152110334	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_152110477_152110844_152111517_152111999
tx.9123	chr4	+	1393	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	60	4	60	1	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGAAGCCTAGGTGGTC	NA	False	NA	NA	False	NA	NA	NA	152262650	152356305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
tx.9124	chr4	+	1572	9	FSM	ENSMUSG00000028937.15	ENSMUST00000167926.8	1505	9	-74	7	-74	1	multi-exon	FALSE	canonical	3	33	junction_1	152.008172066504	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGAAGCCTAGGTGGTC	NA	False	NA	NA	False	NA	NA	NA	152270516	152356305	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
tx.9125	chr4	-	1501	8	ISM	ENSMUSG00000058498.13	ENSMUST00000076183.12	2466	17	5050	-1	-155	1	3prime_fragment	TRUE	canonical	3	8	junction_7	5.57325977232319	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTACAGTGATCACTC	NA	False	NA	NA	False	NA	NA	NA	152398015	152391474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_152392074_152393294_152393361_152395840_152395959_152396228_152396281_152396527_152396714_152396846_152397034_152397643_152397742_152397820
tx.9126	chr4	+	466	4	FSM	ENSMUSG00000028936.16	ENSMUST00000103191.11	474	4	8	0	-6	0	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	9372	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	152410317	152416937	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
tx.9127	chr4	-	518	2	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTTGTTTTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	152668185	152665274	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_-_152665662_152668054
tx.9128	chr4	+	1577	3	ISM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	18	0	0	0	intron_retention	FALSE	canonical	3	743	junction_1	52	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	154041711	154046382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_154041780_154044205_154044320_154044987
tx.9129	chr4	+	1080	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	18	0	0	0	multi-exon	FALSE	canonical	3	743	junction_1	42.5519290592879	541	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	154041711	154046382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
tx.913	chr10	+	1343	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	21	0	21	0	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	907	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2073	False	NA	NA	False	NA	NA	NA	61484351	61509947	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
tx.9130	chr4	+	966	3	FSM	ENSMUSG00000047613.11	ENSMUST00000105645.9	977	3	18	-7	0	0	multi-exon	FALSE	canonical	3	25	junction_1	388	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	154041711	154046382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_154041780_154044987_154045450_154045946
tx.9131	chr4	-	2045	7	FSM	ENSMUSG00000029027.10	ENSMUST00000030893.3	2093	7	48	0	3	0	multi-exon	FALSE	canonical	3	25	junction_6	5.79271573232759	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTCAAAATTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	154059535	154048905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154057236_154057426_154059025_154059153_154059323
tx.9132	chr4	-	518	4	FSM	ENSMUSG00000078350.12	ENSMUST00000146054.8	707	4	190	-1	6	0	multi-exon	FALSE	canonical	3	33	junction_2	2.35702260395516	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGGATTCCCTCCCA	NA	False	NA	NA	False	NA	NA	NA	154110417	154107766	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_154107911_154108144_154108349_154109960_154110079_154110365
tx.9133	chr4	+	1601	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	2	-5	2	5	multi-exon	FALSE	canonical	3	51	junction_4	6.78354840224641	52	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTGGTTGTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	154226830	154241278	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
tx.9134	chr4	-	1412	3	ISM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	405	0	-95	0	3prime_fragment	FALSE	canonical	3	665	junction_1	21.5	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	154244718	154241941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_154243023_154243725_154243880_154244541
tx.9135	chr4	-	1440	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	284	0	-216	0	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	154244839	154241941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
tx.9136	chr4	-	742	3	ISM	ENSMUSG00000029032.13	ENSMUST00000144145.8	4123	14	19584	43	2191	-43	3prime_fragment	FALSE	canonical	3	34	junction_2	2	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACATGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	154364765	154362985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_154363553_154364154_154364257_154364692
tx.9137	chr4	-	837	7	FSM	ENSMUSG00000029059.10	ENSMUST00000030935.10	883	7	18	28	18	-28	multi-exon	FALSE	canonical	3	64	junction_6	8.17856276425687	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGTCTCACTGCTTCC	NA	False	NA	NA	False	NA	NA	NA	154983549	154980883	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_154981055_154981496_154981616_154981805_154981882_154981962_154982027_154982584_154982637_154982932_154983138_154983399
tx.9138	chr4	+	2569	19	FSM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	6	-67	-4	0	multi-exon	FALSE	canonical	3	88	junction_8	27.1993100856585	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048585	155065395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
tx.9139	chr4	+	1592	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	18	78	18	-78	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAATGAAGGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	155151490	155156812	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
tx.914	chr10	+	2606	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	7	0	7	0	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	267	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516095	61529076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
tx.9140	chr4	-	1313	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	15	268	13	-268	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	478	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTATTTTGACACTTT	NA	False	NA	NA	False	NA	NA	NA	155170815	155158834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
tx.9141	chr4	-	1535	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	0	268	0	-268	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	129	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTATTTTGACACTTT	NA	False	NA	NA	False	NA	NA	NA	155170828	155158834	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
tx.9142	chr4	-	1429	8	NIC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	20	-273	combination_of_known_junctions	FALSE	canonical	3	91	junction_7	617.350990035619	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGACTATTTTGAC	NA	False	NA	NA	False	NA	NA	NA	155170808	155158839	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167694_155170661
tx.9143	chr4	+	1772	14	NNC	ENSMUSG00000029049.15	novel	1659	14	NA	NA	-136	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	9.60892090438596	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAGTAGCACCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	155170897	155229959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_155171139_155171877_155171950_155173942_155174042_155175359_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
tx.9144	chr4	+	1650	14	FSM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	6	3	-6	-3	multi-exon	FALSE	canonical	3	16	junction_9	6.41927570616156	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAGTAGCACCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	155171039	155229959	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
tx.9145	chr4	+	1067	4	FSM	ENSMUSG00000073684.14	ENSMUST00000178473.8	1076	4	7	2	7	1	multi-exon	FALSE	canonical	3	113	junction_1	46.5784881201135	73	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTCCTTCATAGC	NA	False	NA	NA	False	NA	NA	NA	155334429	155341142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155334520_155334962_155335108_155335212_155335494_155340591
tx.9146	chr4	+	1452	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	30	-3	30	0	multi-exon	FALSE	canonical	3	207	junction_2	4.5	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTCCTTCATAGCAA	NA	False	NA	NA	False	NA	NA	NA	155334489	155341144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155335108_155335212_155335494_155340591
tx.9147	chr4	-	1422	10	ISM	ENSMUSG00000029053.17	ENSMUST00000103178.11	4083	15	55998	1940	11397	31	3prime_fragment	FALSE	canonical	3	151	junction_7	25.2327437672698	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTCTGATGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	155374231	155346525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087
tx.9148	chr4	-	1690	13	ISM	ENSMUSG00000029053.17	ENSMUST00000103178.11	4083	15	51418	1940	6817	31	3prime_fragment	FALSE	canonical	3	151	junction_7	22.7333577712479	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTCTGATGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	155378811	155346525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723
tx.9149	chr4	-	2327	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-34	348	-34	31	multi-exon	FALSE	canonical	3	142	junction_14	28.8196876191202	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTCTGATGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	155445852	155346525	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
tx.915	chr10	+	1057	3	ISM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	2780	4	1584	-4	3prime_fragment	FALSE	canonical	3	276	junction_2	4	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTCTGTTGGCTGC	NA	False	NA	NA	False	NA	NA	NA	61534072	61538548	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_61534208_61535221_61535408_61537812
tx.9150	chr4	-	550	4	ISM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-38	92894	-38	1519	5prime_fragment	FALSE	canonical	3	200	junction_1	19.2584757675391	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATGAGTGTTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	155445856	155439071	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_155439162_155440883_155440974_155441937_155442060_155445608
tx.9151	chr4	+	1542	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	138	1451	138	165	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGTGTGATTGTGAGA	NA	False	NA	NA	False	NA	NA	NA	155575964	155642275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
tx.9152	chr4	+	421	2	ISM	ENSMUSG00000029064.16	ENSMUST00000176308.2	812	4	3985	-160	3985	160	3prime_fragment	FALSE	canonical	3	3030	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACCCTGAGTGTGATTG	3081	False	NA	NA	False	NA	NA	NA	155641665	155642270	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_155641744_155641927
tx.9153	chr4	+	3030	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	118	4	-8	0	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9690	False	NA	NA	False	NA	NA	NA	155648274	155675454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
tx.9154	chr4	+	2596	20	FSM	ENSMUSG00000029062.15	ENSMUST00000067081.10	2595	20	-4	3	-4	-3	multi-exon	TRUE	canonical	3	247	junction_2	74.7943440763884	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3958	False	NA	NA	False	NA	NA	NA	155709321	155734392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
tx.9155	chr4	-	1257	8	FSM	ENSMUSG00000029061.3	ENSMUST00000030937.2	1434	8	177	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.50713268211203	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTTGTTTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	155737664	155735111	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_155735341_155735463_155735591_155735695_155735807_155735887_155736053_155736441_155736610_155736678_155736819_155736905_155737043_155737484
tx.9156	chr4	-	549	3	ISM	ENSMUSG00000029060.18	ENSMUST00000139788.8	1558	6	1306	-2	1306	1	3prime_fragment	FALSE	canonical	3	377	junction_2	1.5	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	NA	False	NA	NA	False	NA	NA	NA	155739878	155739137	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_155739451_155739561_155739628_155739708
tx.9157	chr4	-	2301	14	ISM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	9628	0	13	0	3prime_fragment	FALSE	canonical	3	118	junction_12	64.9660812730484	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	NA	False	NA	NA	False	NA	NA	NA	155744027	155739138	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844
tx.9158	chr4	+	1059	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	318	95	-6	-95	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	541	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAAGTGTCTGTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	155789574	155818241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
tx.9159	chr4	+	852	4	FSM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	-14	36	-3	-36	multi-exon	FALSE	canonical	3	1675	junction_1	40.2685430026411	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTAGTAAAAACCAAGAA	NA	False	NA	NA	False	NA	NA	NA	155789577	155816610	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383
tx.916	chr10	+	1488	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	24	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	38.6497408676411	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	61551065	61574432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
tx.9160	chr4	-	1198	6	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	10875	1	-875	-1	3prime_fragment	FALSE	canonical	3	684	junction_5	67.8132730370685	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGCTTGATGGCTGAG	6424	False	NA	NA	False	NA	NA	NA	155834675	155825098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588
tx.9161	chr4	-	2414	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	-3	2	-3	-2	multi-exon	FALSE	canonical	3	684	junction_5	53.203759265676	161	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	NA	False	NA	NA	NA	155845553	155825099	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
tx.9162	chr4	+	664	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	100	0	-26	0	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	399	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	False	NA	NA	False	NA	NA	NA	155888077	155893288	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
tx.9163	chr4	+	1262	6	ISM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	5	5418	5	-2747	5prime_fragment	FALSE	canonical	3	604	junction_5	178.167786089405	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTACTAGTCGTAAAG	4642	False	NA	NA	False	NA	NA	NA	155896962	155903582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995
tx.9164	chr4	+	795	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	303	61	-5	8	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	906	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGACCTAGAGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	155916110	155917526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
tx.9165	chr4	+	1765	7	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1674	-6	-904	6	3prime_fragment	FALSE	canonical	3	23	junction_2	4.10960933531265	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGACCTGCTGCTCTC	NA	False	NA	NA	False	NA	NA	NA	155925856	155928551	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
tx.9166	chr4	-	2106	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	0	556	0	17	multi-exon	FALSE	canonical	3	76	junction_1	2.5	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGCATTCTGGGA	NA	False	NA	NA	False	NA	NA	NA	155953897	155949735	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_155951343_155951569_155951795_155953623
tx.9167	chr4	+	1855	16	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-2	136	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	247.894457828775	12	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9979	False	NA	NA	False	NA	NA	NA	155954021	155973326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971934_155972363_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
tx.9168	chr4	+	2113	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	21	234	0	136	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	153	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	NA	False	NA	NA	NA	155954023	155973326	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
tx.9169	chr4	-	1218	8	FSM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	30	-5	4	5	multi-exon	FALSE	canonical	3	268	junction_3	43.9103911276089	97	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTTTATTACTTTAGC	9110	False	NA	NA	False	NA	NA	NA	155976208	155973313	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
tx.917	chr10	+	1887	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	-10	-435	-10	435	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTCTCACTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	61551079	61575474	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
tx.9170	chr4	-	1196	5	ISM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	36	1123	10	395	5prime_fragment	FALSE	canonical	3	293	junction_3	44.5954033505697	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGCAATCGCTATTTCC	9116	False	NA	NA	False	NA	NA	NA	155976202	155974441	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_-_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
tx.9171	chr4	+	1457	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	-20	-3	-1	0	multi-exon	FALSE	canonical	3	230	junction_1	334.708584793838	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	775	False	NA	NA	False	NA	NA	NA	156028305	156042171	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
tx.9172	chr4	+	1293	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	19	-3	0	0	multi-exon	FALSE	canonical	3	344	junction_1	275.8918870379	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	776	False	NA	NA	False	NA	NA	NA	156028306	156042171	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
tx.9173	chr4	+	1304	8	FSM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	8	3	8	-3	multi-exon	FALSE	canonical	3	21	junction_4	2.37332110369088	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGTGCACTCTGCT	NA	False	NA	NA	False	NA	NA	NA	156046782	156051083	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
tx.9174	chr4	+	1537	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	240	3400	-19	0	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	277	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTCTCCAGCATGTG	NA	False	NA	NA	False	NA	NA	NA	156077607	156094667	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
tx.9175	chr4	+	2699	11	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	73.1142257019795	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8237	False	NA	NA	False	NA	NA	NA	156194420	156211722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.9176	chr4	+	2543	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	-15	0	-15	0	multi-exon	FALSE	canonical	3	69	junction_5	55.1321644374276	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8240	False	NA	NA	False	NA	NA	NA	156194423	156211722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.9177	chr4	+	2848	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	88	junction_1	48.8618908250592	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8256	False	NA	NA	False	NA	NA	NA	156194439	156211721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.9178	chr4	+	2440	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	67.7595703572565	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8247	False	NA	NA	False	NA	NA	NA	156194430	156211722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.9179	chr4	+	2964	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	85	junction_1	49.4621067080649	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8291	False	NA	NA	False	NA	NA	NA	156194474	156211722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.918	chr10	+	668	5	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-19	10335	-7	391	5prime_fragment	FALSE	canonical	3	116	junction_1	28.6050694807756	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTGTTTGATTGTTTA	NA	False	NA	NA	False	NA	NA	NA	61551082	61564091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907
tx.9180	chr4	+	2637	10	FSM	ENSMUSG00000059939.14	ENSMUST00000169550.8	2660	10	25	-2	4	0	multi-exon	FALSE	canonical	3	69	junction_5	55.5417760689095	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8296	False	NA	NA	False	NA	NA	NA	156194479	156211722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
tx.9181	chr4	+	737	4	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	9425	193	3714	-180	3prime_fragment	FALSE	canonical	3	1821	junction_1	105.749179140497	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	156329891	156331880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_156330001_156330287_156330424_156331133_156331221_156331475
tx.9182	chr4	+	596	3	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	9853	193	4142	-180	3prime_fragment	FALSE	canonical	3	2038	junction_1	7	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	156330319	156331880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr4_+_156330424_156331133_156331221_156331475
tx.9183	chr4	+	1208	7	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_5	9.7581874455363	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCCTCAGCTCACAACT	NA	False	NA	NA	False	NA	NA	NA	156390375	156409713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
tx.9184	chr4	+	1362	6	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_4	6.89927532426414	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCCTCAGCTCACAACT	NA	False	NA	NA	False	NA	NA	NA	156390499	156409713	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
tx.9185	chr5	+	678	2	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCTACCAAAGTTTAT	41	False	NA	NA	False	NA	NA	NA	3343967	3348070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_3344033_3347457
tx.9186	chr5	+	1637	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-40	-1156	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTGCCATTTCGTTTT	NA	False	NA	NA	False	NA	NA	NA	3391444	3571069	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
tx.9187	chr5	+	1439	7	FSM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	-124	1155	-124	-1155	multi-exon	FALSE	canonical	3	75	junction_5	14.1852818873021	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGCCATTTCGTTTTC	NA	False	NA	NA	False	NA	NA	NA	3394187	3571070	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
tx.9188	chr5	+	2000	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-8	-501	-3	3	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTTGTGTATCAGT	NA	False	NA	NA	False	NA	NA	NA	3593829	3620241	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
tx.9189	chr5	+	372	4	ISM	ENSMUSG00000058503.12	ENSMUST00000198598.5	2750	5	-8	2499	-5	-2499	5prime_fragment	FALSE	canonical	3	196	junction_3	8.17856276425687	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACACCACTTTCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	3593827	3608547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472
tx.919	chr10	+	1474	10	NNC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	53.3828473862319	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	61551082	61574432	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571233_61571438_61572361_61572538_61574177
tx.9190	chr5	+	2394	10	FSM	ENSMUSG00000058503.12	ENSMUST00000196059.5	1961	10	-8	-425	0	0	multi-exon	FALSE	canonical	0	0	junction_9	63.1977105383095	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGTCTTTGTGTATC	NA	False	NA	NA	False	NA	NA	NA	3593835	3620238	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
tx.9191	chr5	+	1669	8	ISM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	178	27010	45	4101	5prime_fragment	FALSE	canonical	3	59	junction_7	8.71311467541538	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAGAAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	3646243	3660222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178
tx.9192	chr5	-	1096	4	ISM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	1022	897	894	432	3prime_fragment	FALSE	canonical	3	302	junction_1	70.8848832027441	60	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGGTGTAAAACACTAAG	NA	False	NA	-95	True	NA	NA	NA	3696912	3690857	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783
tx.9193	chr5	-	1061	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	526	958	398	371	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGTGTCTATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	3697408	3690918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
tx.9194	chr5	-	1176	5	NNC	ENSMUSG00000040351.12	novel	2572	19	NA	NA	-31009	11532	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	33.9742549587184	6	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGGAATTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	3783141	3772147	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
tx.9195	chr5	+	2976	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7985	False	NA	NA	False	NA	NA	NA	3853183	3891359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
tx.9196	chr5	-	1361	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	15	0	-11	0	multi-exon	FALSE	canonical	3	112	junction_1	0	47	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	False	NA	NA	False	NA	NA	NA	3943918	3940580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_3941898_3943874
tx.9197	chr5	+	1921	8	FSM	ENSMUSG00000040407.19	ENSMUST00000143365.8	2010	8	104	-15	8	15	multi-exon	FALSE	canonical	3	19	junction_3	6.1145527311522	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGCTAGACAGAATGG	NA	False	NA	NA	False	NA	NA	NA	3978281	4011004	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111
tx.9198	chr5	-	2679	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	283	969	-42	-969	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	291	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTACTGGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	4154463	4132113	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
tx.9199	chr5	+	1388	2	NNC	ENSMUSG00000053178.6	novel	1368	2	NA	NA	-43	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACATTTATTTTGTATG	NA	False	NA	NA	False	NA	NA	NA	4242323	4247647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_4242400_4246335
tx.92	chr1	-	697	3	ISM	ENSMUSG00000058407.13	ENSMUST00000194747.2	2605	4	3128	47	1749	-47	3prime_fragment	FALSE	canonical	3	675	junction_1	120.5	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTGATTGATTTTA	NA	False	NA	NA	False	NA	NA	NA	38033177	38026523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_-_38026861_38029283_38029539_38033072
tx.920	chr10	-	1986	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	207	-18	207	18	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAGCCCTTTATTGCG	NA	False	NA	NA	False	NA	NA	NA	61619719	61574425	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
tx.9200	chr5	+	1363	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	6	-1	6	1	multi-exon	FALSE	canonical	3	119	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	False	NA	NA	False	NA	NA	NA	4242372	4247652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_4242419_4246335
tx.9201	chr5	-	2963	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	9	0	-6	0	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	NA	NA	NA	5609529	5587453	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
tx.9202	chr5	-	3030	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	83.4476253277438	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	NA	NA	NA	5609541	5587453	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
tx.9203	chr5	-	3178	23	FSM	ENSMUSG00000040473.16	ENSMUST00000054865.13	4956	23	13	1765	1	-5	multi-exon	FALSE	canonical	2	4	junction_19	2.58132197536376	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACTGTCTTTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5714226	5631042	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
tx.9204	chr5	-	1251	5	FSM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	-26	5	-26	3	multi-exon	FALSE	canonical	3	19	junction_3	6.38357266740185	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTTGTATCACAACT	NA	False	NA	NA	False	NA	NA	NA	5799352	5786321	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_5786674_5789795_5789961_5790349_5790863_5792825_5792941_5799246
tx.9205	chr5	-	1161	4	NIC	ENSMUSG00000015652.10	novel	1230	5	NA	NA	-39	7	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	12.684198393627	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAACTGTTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	5799365	5786309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_5786674_5789795_5789961_5790349_5790863_5799246
tx.9206	chr5	-	938	3	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	-26	3829	-26	-3821	5prime_fragment	FALSE	canonical	3	19	junction_1	5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTTTTTGCATAGGTG	NA	False	NA	NA	False	NA	NA	NA	5799352	5790145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_5790863_5792825_5792941_5799246
tx.9207	chr5	-	1484	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	102	multi-exon	FALSE	canonical	0	0	junction_1	0	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	5833633	5831512	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr5_-_5832082_5832718
tx.9208	chr5	-	514	2	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	2	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCGTGAACTGGTATCAC	NA	False	NA	NA	False	NA	NA	NA	8053777	8046430	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_-_8046846_8053678
tx.9209	chr5	+	866	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	16	1369	-15	56	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGAGCCATTATCAAT	NA	False	NA	NA	False	NA	NA	NA	8106542	8117782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
tx.921	chr10	+	667	4	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	26.9608770051883	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTGCTACTTCATAAC	NA	False	NA	NA	False	NA	NA	NA	61670315	61710020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_61670501_61698165_61698280_61709460_61709561_61709752
tx.9210	chr5	-	1564	5	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	17800	0	324	0	3prime_fragment	FALSE	canonical	3	396	junction_3	24.2332416321053	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	8454916	8447010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870
tx.9211	chr5	-	2153	11	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	1322	0	1188	0	3prime_fragment	FALSE	canonical	3	396	junction_3	43.2070596083557	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	8471394	8447010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220
tx.9212	chr5	-	2365	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	35	2	0	-2	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCCTGAGAATAAAAATG	NA	False	NA	NA	False	NA	NA	NA	8472681	8447012	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
tx.9213	chr5	+	2763	12	FSM	ENSMUSG00000054099.12	ENSMUST00000066921.10	2784	12	17	4	-6	4	multi-exon	FALSE	canonical	3	29	junction_1	8.37055050175789	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGTATTTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	8472866	8504793	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
tx.9214	chr5	+	2685	11	FSM	ENSMUSG00000054099.12	ENSMUST00000170496.6	2602	11	-26	-57	0	4	multi-exon	FALSE	canonical	2	9	junction_1	12.7342059037853	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGTATTTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	8472872	8504793	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_8473040_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
tx.9215	chr5	+	2368	7	NNC	ENSMUSG00000040584.9	novel	494	2	NA	NA	-136	-52	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	78.9460082728837	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	NA	NA	NA	8783151	8798518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_8783506_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
tx.9216	chr5	+	2378	6	ISM	ENSMUSG00000040584.9	ENSMUST00000126846.2	2705	10	13416	52	-53	-52	3prime_fragment	FALSE	canonical	3	112	junction_1	56.9582303095874	24	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	NA	NA	NA	8783234	8798518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
tx.9217	chr5	+	772	5	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-64	55437	-25	-2773	5prime_fragment	FALSE	canonical	3	110	junction_4	17.1955662890176	6	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGTTACCTTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	8848121	8860878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557
tx.9218	chr5	+	1435	4	ISM	ENSMUSG00000028970.10	ENSMUST00000196580.5	690	6	-6	6472	0	-6472	5prime_fragment	FALSE	canonical	3	144	junction_1	3.74165738677394	20	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGTGCTAAAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	8848146	8857179	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007
tx.9219	chr5	+	1753	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50989	0	-158	0	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	39	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	5226	False	NA	NA	False	NA	NA	NA	8899174	8916315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
tx.922	chr10	+	533	3	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	20	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAACTGTAAAATGAGTT	NA	False	NA	NA	False	NA	NA	NA	61670331	61710002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_61670501_61698165_61698280_61709752
tx.9220	chr5	+	1447	6	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-288	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	91.0173609812985	11	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	7150	False	NA	NA	False	NA	NA	NA	8901098	8916315	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_8901271_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
tx.9221	chr5	-	2839	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	143	14	-139	-14	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	80	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTCACCTTACGGTTG	NA	False	NA	NA	False	NA	NA	NA	9047181	9016046	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
tx.9222	chr5	+	946	4	ISM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	451	0	451	0	3prime_fragment	FALSE	canonical	3	350	junction_1	2.82842712474619	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTTTTTCCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	9151197	9169045	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_9151396_9166479_9166531_9167458_9167564_9168453
tx.9223	chr5	-	2783	11	ISM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	25619	-4	-9553	0	3prime_fragment	FALSE	canonical	3	112	junction_5	44.1796333167219	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	NA	False	NA	NA	NA	9186130	9168867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065
tx.9224	chr5	-	3712	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	27	67	0	0	multi-exon	FALSE	canonical	3	130	junction_6	37.7529760049699	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	NA	False	NA	NA	NA	9211749	9168867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
tx.9225	chr5	-	3504	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	-2	-4	1	0	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	NA	False	NA	NA	NA	9211751	9168867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
tx.9226	chr5	-	4637	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	3	-109	combination_of_known_junctions	TRUE	canonical	3	53	junction_9	51.0853143531539	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21087072	20963769	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
tx.9227	chr5	+	874	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	273	0	-43	0	multi-exon	FALSE	canonical	3	465	junction_1	0	113	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCACATGCCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	21087461	21091868	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_21087654_21091186
tx.9228	chr5	-	725	3	ISM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	23	27064	23	19	5prime_fragment	FALSE	canonical	3	36	junction_1	4	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACAAAGAGAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	21156797	21125089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_21125161_21132617_21132729_21156254
tx.9229	chr5	+	2075	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	141	5	3	-5	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	241	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTTTTCCAATTTGT	NA	False	NA	NA	False	NA	NA	NA	21851017	21867687	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
tx.923	chr10	+	851	4	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	9.03081145609604	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGCACACACCTTTAA	NA	False	NA	NA	False	NA	NA	NA	61751882	61768392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_61752029_61767321_61767485_61767595_61767722_61767976
tx.9230	chr5	-	3121	3	ISM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	25393	3	25393	-1	3prime_fragment	FALSE	canonical	3	114	junction_2	10.5	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTGAAAAGATACCTGA	NA	False	NA	NA	False	NA	NA	NA	21880999	21867901	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_21870361_21875486_21875602_21880452
tx.9231	chr5	-	2066	4	ISM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	17358	2039	17358	-2037	3prime_fragment	FALSE	canonical	3	67	junction_3	28.4292494136272	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAAGTTCCATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	21889034	21869937	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153
tx.9232	chr5	-	1669	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	18	2037	16	-2037	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAAGTTCCATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	21906376	21869937	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
tx.9233	chr5	+	1604	13	FSM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	11	0	11	0	multi-exon	TRUE	canonical	3	306	junction_5	33.8430815184827	308	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTAGTCTGTTATATGT	NA	False	NA	NA	False	NA	NA	NA	21942149	21962150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
tx.9234	chr5	-	2083	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	44	6	9	-1	multi-exon	FALSE	canonical	3	849	junction_11	91.8299209136107	72	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGGAATTATAGTCATC	NA	False	NA	NA	False	NA	NA	NA	21990205	21962270	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
tx.9235	chr5	-	1596	14	ISM	ENSMUSG00000029014.15	ENSMUST00000115195.8	1994	17	8401	-8	-8148	-2	3prime_fragment	FALSE	canonical	3	849	junction_11	101.645281806926	318	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGGAATTATAGTCAT	NA	False	NA	NA	False	NA	NA	NA	21981813	21962271	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714
tx.9236	chr5	+	1448	12	ISM	ENSMUSG00000028932.9	ENSMUST00000030769.7	1785	13	1468	1	1468	-1	3prime_fragment	FALSE	canonical	3	1482	junction_9	138.585355743117	2225	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCTTCCAGATCTCT	NA	False	NA	NA	False	NA	NA	NA	21991748	22008784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
tx.9237	chr5	-	2100	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	5	-2	5	-2	multi-exon	TRUE	canonical	3	527	junction_10	41.6678895284064	190	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTTCTTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	22755368	22691484	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
tx.9238	chr5	+	1924	13	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	6	18774	-2	10	5prime_fragment	FALSE	canonical	3	18	junction_10	3.30298686376774	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAGAGAAAGATAC	NA	False	NA	NA	False	NA	NA	NA	23639444	23690459	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344
tx.9239	chr5	-	918	10	NNC	ENSMUSG00000062604.12	novel	946	9	NA	NA	-12	17	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	64.2716073097043	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTGAAAAAGAAACAGAAGA	NA	False	NA	NA	False	NA	NA	NA	23880977	23730711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
tx.924	chr10	+	1546	2	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTGGGCTGCATTCAC	NA	False	NA	NA	False	NA	NA	NA	61751916	61759353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr10_+_61752029_61757919
tx.9240	chr5	-	917	9	NIC	ENSMUSG00000062604.12	novel	946	9	NA	NA	-16	-1059	combination_of_known_junctions	FALSE	canonical	3	183	junction_1	32.7945784391262	1	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTCACATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	23880981	23731787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
tx.9241	chr5	-	1165	8	NIC	ENSMUSG00000062604.12	novel	946	9	NA	NA	-12	328	combination_of_known_junctions	FALSE	canonical	3	228	junction_6	19.3369689286335	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTCAGTCTTCTGATT	NA	False	NA	NA	False	NA	NA	NA	23880977	23732616	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
tx.9242	chr5	-	1190	5	NNC	ENSMUSG00000105987.5	novel	345	4	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.97764286847643	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTCTGAGGTCTTCTT	5257	False	NA	NA	False	NA	NA	NA	23917664	23903289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_23904335_23905429_23905472_23915363_23915407_23916113_23916149_23917639
tx.9243	chr5	-	2285	4	FSM	ENSMUSG00000105987.5	ENSMUST00000198984.5	345	4	-4	-1936	0	4	multi-exon	FALSE	canonical	2	2	junction_3	6.68331255192114	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTCTGAGGTCTTCTT	5257	False	NA	NA	False	NA	NA	NA	23917664	23903289	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_23905472_23915363_23915407_23916113_23916149_23917639
tx.9244	chr5	-	3401	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	19	-13	19	13	multi-exon	TRUE	canonical	3	301	junction_13	29.1369181623589	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCCTGGCTAACGGG	NA	False	NA	NA	False	NA	NA	NA	23988690	23945632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
tx.9245	chr5	-	3025	15	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	1241	-8	61	0	3prime_fragment	FALSE	canonical	3	301	junction_13	30.0112223907617	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTAAAAATCTTGTC	NA	False	NA	NA	False	NA	NA	NA	23983315	23945645	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070
tx.9246	chr5	-	391	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	26	708	26	-708	multi-exon	FALSE	canonical	3	3790	junction_2	61.5	2662	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCTTTCATACTTT	NA	False	NA	NA	False	NA	NA	NA	24049133	24044649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_24044827_24046707_24046757_24048968
tx.9247	chr5	+	1410	4	FSM	ENSMUSG00000097180.6	ENSMUST00000181574.6	1375	4	-35	0	-35	0	multi-exon	FALSE	canonical	0	0	junction_3	11.0453610171873	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCGTCAGGTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	24055559	24060036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_24055620_24057118_24057154_24057715_24057759_24058764
tx.9248	chr5	+	2405	3	FSM	ENSMUSG00000097180.6	ENSMUST00000197551.2	318	3	-31	-2056	-27	-3	multi-exon	FALSE	canonical	3	15	junction_1	6	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTGTCGTCAGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	24055567	24060033	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_24055620_24057118_24057154_24057715
tx.9249	chr5	+	2982	11	FSM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	-13	-3	-13	3	multi-exon	FALSE	canonical	3	50	junction_4	4.51220566907139	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTGCTTTGTTTATTC	NA	False	NA	NA	False	NA	NA	NA	24305589	24365786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
tx.925	chr10	-	1177	4	FSM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	37	555	0	0	multi-exon	FALSE	canonical	3	105	junction_3	8.33999733546454	82	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	False	NA	NA	False	NA	NA	NA	61946792	61943988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_61944903_61945662_61945792_61946014_61946094_61946737
tx.9250	chr5	+	2804	6	FSM	ENSMUSG00000048439.16	ENSMUST00000115101.4	1624	6	-5	-1175	-5	-1	multi-exon	FALSE	canonical	2	3	junction_3	25.7013618316229	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTGTCTGTTATCTAC	5178	False	NA	NA	False	NA	NA	NA	24369992	24389010	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24382997_24383085_24386078_24386164_24386905
tx.9251	chr5	+	1785	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	35	1094	-2	82	multi-exon	TRUE	canonical	3	52	junction_5	7.43116560320265	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACTTTCTGTCCCTTTA	5181	False	NA	NA	False	NA	NA	NA	24369995	24387917	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
tx.9252	chr5	-	1977	9	ISM	ENSMUSG00000038295.15	ENSMUST00000059401.7	3902	14	4270	168	93	-168	3prime_fragment	FALSE	canonical	3	11	junction_1	5.09748712602592	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTAACTCACAAGGTT	9387	False	NA	NA	False	NA	NA	NA	24592871	24589346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686
tx.9253	chr5	+	2700	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	241	-2	0	0	multi-exon	FALSE	canonical	3	156	junction_4	17.0567679626984	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCTGTAGCTTAGTA	NA	False	NA	NA	False	NA	NA	NA	24599393	24614945	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
tx.9254	chr5	-	1152	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-34	191	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	52.4982486917657	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGATATGGTGGTGG	NA	False	NA	-94	True	NA	NA	NA	24628562	24624182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_24624461_24624597_24624679_24624780_24624834_24625245_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
tx.9255	chr5	-	1920	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	14	0	intron_retention	FALSE	canonical	3	14	junction_9	388.340279702616	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	24650222	24646036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650063
tx.9256	chr5	-	1841	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	52	0	3	0	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	217	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	24650233	24646036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
tx.9257	chr5	-	1313	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	15	5	15	3	multi-exon	FALSE	canonical	3	68	junction_2	11	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGTGTCTGTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	24652837	24650460	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_24651272_24651531_24651951_24652754
tx.9258	chr5	-	2513	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	58	-2	58	2	multi-exon	FALSE	canonical	3	1197	junction_13	122.348082348837	239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	NA	False	NA	NA	NA	24782407	24770340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
tx.9259	chr5	-	1349	12	ISM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	3363	0	289	0	3prime_fragment	FALSE	canonical	3	153	junction_8	20.0610638050861	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	24803647	24797619	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
tx.926	chr10	-	1098	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142796.8	1135	3	37	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	41.5	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	False	NA	NA	False	NA	NA	NA	61946792	61943988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_61944903_61945662_61945792_61946737
tx.9260	chr5	+	1967	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	150	1152	-13	-1150	multi-exon	TRUE	canonical	3	384	junction_1	91.6660977100463	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCGTTCCTCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	24890971	24914224	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
tx.9261	chr5	+	2587	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	450	509	-5	-509	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCACAGCAAGTTATTT	NA	False	NA	NA	False	NA	NA	NA	24890979	24914865	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
tx.9262	chr5	+	1290	9	ISM	ENSMUSG00000028954.12	ENSMUST00000200337.2	3862	14	11349	1159	11349	-1159	3prime_fragment	FALSE	canonical	3	571	junction_3	52.2564290303117	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGCTTCTTTGCGTTCC	NA	False	NA	NA	False	NA	NA	NA	24902333	24914215	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
tx.9263	chr5	-	1178	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	181	425	-15	419	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	492	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	25047441	25008245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
tx.9264	chr5	-	2180	12	FSM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	19	6	0	-6	multi-exon	FALSE	canonical	3	116	junction_1	21.3386701313649	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTAAAGTTTTTATGT	NA	False	NA	NA	False	NA	NA	NA	25113448	25067751	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
tx.9265	chr5	-	2182	12	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	87301	9	0	-9	3prime_fragment	FALSE	canonical	3	39	junction_11	38.9905688956947	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGCTAAAGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	25113450	25067754	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320
tx.9266	chr5	-	1551	4	Antisense	novelGene_ENSMUSG00000106144.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.816496580927726	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTTGCCGCAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	25877218	25787372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_25787722_25872372_25873316_25875833_25875919_25877044
tx.9267	chr5	-	1650	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	13	1584	13	655	multi-exon	FALSE	canonical	3	77	junction_1	2.5	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTGTAATTTTTCACA	NA	False	NA	NA	False	NA	NA	NA	25910810	25896393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_25897827_25903248_25903331_25910675
tx.9268	chr5	+	1975	11	NIC	ENSMUSG00000056367.15	novel	1712	12	NA	NA	-32	0	combination_of_known_splicesites	TRUE	canonical	3	16	junction_6	37.7095478625772	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	25964962	26055686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
tx.9269	chr5	+	2106	12	FSM	ENSMUSG00000056367.15	ENSMUST00000088244.6	1712	12	-48	-346	-19	0	multi-exon	FALSE	canonical	3	90	junction_4	20.0016528242663	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	25964975	26055686	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
tx.927	chr10	-	1420	7	ISM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	28013	1959	-1461	354	3prime_fragment	TRUE	canonical	3	245	junction_1	10.975983884018	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTGGAAGTCT	NA	False	NA	NA	False	NA	NA	NA	62039017	62023133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858
tx.9270	chr5	+	2694	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	3	0	3	0	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	28276363	28283660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
tx.9271	chr5	-	2714	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	84	-814	84	814	multi-exon	FALSE	canonical	3	175	junction_1	2	53	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCACTGTCTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	28414936	28406632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_28408435_28412284_28412382_28414121
tx.9272	chr5	-	1465	4	NNC	ENSMUSG00000044681.20	novel	3018	4	NA	NA	152	3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	81.5693297481079	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACTTGCATGAATAAC	NA	False	NA	NA	False	NA	NA	NA	28414868	28407443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_28408435_28412284_28412382_28414121_28414326_28414695
tx.9273	chr5	+	1495	9	NIC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	11.1242977306435	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTAGCTAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	29401003	29430518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_29401083_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
tx.9274	chr5	+	1572	10	FSM	ENSMUSG00000029130.13	ENSMUST00000001247.12	1600	10	22	6	13	-6	multi-exon	FALSE	canonical	3	8	junction_1	13.0421917418852	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTAAAATGTAGCTAGT	NA	False	NA	NA	False	NA	NA	NA	29401016	29430514	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_29401111_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
tx.9275	chr5	-	950	9	ISM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	-1	57589	-1	-29314	5prime_fragment	FALSE	canonical	3	35	junction_4	8.10863737011343	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTGTTACATACTTA	NA	False	NA	NA	False	NA	NA	NA	29583383	29492388	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
tx.9276	chr5	+	2827	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	28	6364	28	5124	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGCACGTGTCTTTC	2987	False	NA	NA	False	NA	NA	NA	29639689	29656477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
tx.9277	chr5	+	1549	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	45	11	-4	-11	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	681	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTGCAGCCTTCTT	4591	False	NA	NA	False	NA	NA	NA	29940982	29972090	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
tx.9278	chr5	-	523	5	ISM	ENSMUSG00000025747.13	ENSMUST00000154751.6	2723	7	5124	-78	5032	78	3prime_fragment	FALSE	canonical	3	1628	junction_1	118.935644362823	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGCTATGAATATCACC	NA	False	NA	NA	False	NA	NA	NA	30273488	30265983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463
tx.9279	chr5	-	1012	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-8	2159	-8	78	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	725	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGCTATGAATATCACC	NA	False	NA	NA	False	NA	NA	NA	30278623	30265983	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
tx.928	chr10	-	1664	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	7	1967	7	346	multi-exon	FALSE	canonical	3	242	junction_7	11.6303613925986	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTATTTGTGTTGTTT	4883	False	NA	NA	False	NA	NA	NA	62067023	62023141	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
tx.9280	chr5	-	1567	9	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	26258	1121	-1785	1	3prime_fragment	FALSE	canonical	3	413	junction_7	30.9715090849639	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCCTGTTTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	30333902	30324422	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797
tx.9281	chr5	-	2719	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	175	1123	3	-1	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	30359985	30324424	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
tx.9282	chr5	+	2022	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	3	8	3	3	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	322	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	30360248	30389583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
tx.9283	chr5	+	2041	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114786.8	2048	16	3	4	0	3	multi-exon	FALSE	canonical	0	0	junction_1	146.097988426337	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	30360272	30389583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_30360381_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
tx.9284	chr5	+	1440	9	ISM	ENSMUSG00000059447.14	ENSMUST00000114783.6	2045	16	18578	-3	-1108	3	3prime_fragment	FALSE	canonical	3	516	junction_3	36.8559272709289	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	30378847	30389583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
tx.9285	chr5	-	720	2	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATTAGCGGAGGTCTC	NA	False	NA	NA	False	NA	NA	NA	30437401	30434233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_-_30434875_30437322
tx.9286	chr5	+	3280	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	51	3472	-3	-18	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAAATGTGTTTCTAG	NA	False	NA	NA	False	NA	NA	NA	30437629	30473953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
tx.9287	chr5	+	1965	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	16	1107	-4	378	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTTTTGACTTCCTT	6694	False	NA	NA	False	NA	NA	NA	30805292	30815966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
tx.9288	chr5	+	1062	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	0	-31	0	0	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	165	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9186	False	NA	NA	False	NA	NA	NA	30824240	30831753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
tx.9289	chr5	+	917	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	128	421	-7	0	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	369	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9194	False	NA	NA	False	NA	NA	NA	30824248	30831753	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
tx.929	chr10	-	1095	2	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	68812	249	18599	0	3prime_fragment	FALSE	canonical	3	442	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	3557	False	NA	NA	False	NA	NA	NA	62107509	62104882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62105836_62107367
tx.9290	chr5	+	933	5	FSM	ENSMUSG00000029177.10	ENSMUST00000199617.2	827	5	-88	-18	-2	-5	multi-exon	TRUE	canonical	3	33	junction_3	705.72033235553	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCCGTGGCAGTCCCG	9199	False	NA	NA	False	NA	NA	NA	30824253	30831748	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830610_30830788_30831381
tx.9291	chr5	+	2770	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1623	1717	0	0	multi-exon	TRUE	canonical	3	358	junction_2	22.5422346662881	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	31026978	31034807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
tx.9292	chr5	-	470	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	41	633	-22	0	multi-exon	FALSE	canonical	3	823	junction_2	132.5	482	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTGTGGTCCCAAA	NA	False	NA	NA	False	NA	NA	NA	31065091	31063861	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31064111_31064742_31064881_31065008
tx.9293	chr5	-	571	2	FSM	ENSMUSG00000038803.8	ENSMUST00000132034.5	576	2	3	2	3	-2	multi-exon	FALSE	canonical	3	1088	junction_1	0	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTTTTGTGGTCCCA	NA	False	NA	NA	False	NA	NA	NA	31065066	31063863	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31064111_31064742
tx.9294	chr5	+	2683	5	ISM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	3713	-2	-2806	2	3prime_fragment	TRUE	canonical	2	7	junction_3	4.60298815988049	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTCTGCTCTAGTACAT	NA	False	NA	NA	False	NA	NA	NA	31074458	31078623	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
tx.9295	chr5	+	1332	7	FSM	ENSMUSG00000029162.16	ENSMUST00000201571.4	1087	7	-45	-200	-45	1	multi-exon	FALSE	canonical	3	16	junction_1	5.24933858267454	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTCTGTCTGTCTGTC	1097	False	NA	NA	False	NA	NA	NA	31078888	31088590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31079352_31082082_31082200_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
tx.9296	chr5	+	1363	9	FSM	ENSMUSG00000006638.16	ENSMUST00000201125.4	1352	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	60	junction_5	7.48331477354788	73	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGAGGTTCCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	31107398	31112435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111610_31111748_31111798_31111877_31112044_31112159
tx.9297	chr5	-	2030	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	81	4189	0	1	multi-exon	TRUE	canonical	3	205	junction_7	28.1735691739616	291	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	NA	False	NA	NA	NA	31117624	31112385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
tx.9298	chr5	-	2316	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	234	junction_6	22.518926280272	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	NA	False	NA	NA	NA	31117624	31112385	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
tx.9299	chr5	-	3154	18	NIC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	63	junction_17	22.1293773649543	29	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	738	False	NA	NA	False	NA	NA	NA	31205418	31193379	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
tx.93	chr1	+	1153	5	ISM	ENSMUSG00000026083.13	ENSMUST00000192548.6	5788	22	-5	30357	-5	-23776	5prime_fragment	FALSE	canonical	3	579	junction_4	48.9948976935354	221	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAGAAAGGCCCTAG	1403	False	NA	NA	False	NA	NA	NA	38037204	38060745	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674
tx.930	chr10	-	1599	5	ISM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	59438	249	9225	0	3prime_fragment	FALSE	canonical	3	442	junction_1	40.5061723691588	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	62116883	62104882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811
tx.9300	chr5	+	965	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	1	0	1	0	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	163	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTACCTGTGCGTG	909	False	NA	NA	False	NA	NA	NA	31205979	31211967	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
tx.9301	chr5	+	967	5	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	22212	0	1179	0	3prime_fragment	FALSE	canonical	3	874	junction_1	101.327131115018	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	NA	False	NA	NA	False	NA	NA	NA	31234335	31235823	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
tx.9302	chr5	+	1534	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	-100	0	-100	0	multi-exon	TRUE	canonical	2	14	junction_1	4.29389100932942	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGGCTCCTTTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	31273955	31294972	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
tx.9303	chr5	-	1693	8	FSM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	25	6	2	3	multi-exon	FALSE	canonical	3	233	junction_7	57.209960599853	204	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAATTGTGTCTTTAGCA	NA	False	NA	NA	False	NA	NA	NA	31311570	31298003	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
tx.9304	chr5	-	3725	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	225	602	-8	-86	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTTTTACAAGTCATG	NA	False	NA	NA	False	NA	NA	NA	31337263	31313950	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
tx.9305	chr5	-	2132	15	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	-278	combination_of_known_junctions	TRUE	canonical	3	165	junction_12	161.133421709578	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTACAGAGCTTTCC	NA	False	NA	NA	False	NA	NA	NA	31337253	31317116	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
tx.9306	chr5	-	1680	13	FSM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	336	9	45	0	multi-exon	FALSE	canonical	3	556	junction_3	56.1372326436643	452	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGACTCTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	31350438	31344910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
tx.9307	chr5	+	1958	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	60	0	-7	0	multi-exon	TRUE	canonical	3	351	junction_8	24.4791664857432	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	NA	False	NA	NA	NA	31350630	31356244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
tx.9308	chr5	+	827	5	ISM	ENSMUSG00000029146.15	ENSMUST00000202032.4	2111	15	3804	243	1608	0	3prime_fragment	FALSE	canonical	3	411	junction_2	8.86002257333467	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	NA	False	NA	NA	NA	31355001	31356244	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
tx.9309	chr5	-	2191	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	37	0	37	0	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	NA	False	NA	NA	NA	31359610	31356324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
tx.931	chr10	-	3658	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	371	249	371	0	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	62175950	62104882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
tx.9310	chr5	-	1061	4	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	15902	4	420	0	3prime_fragment	FALSE	canonical	3	614	junction_2	17.6823829464998	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTCATAGTGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	31362007	31360011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796
tx.9311	chr5	-	1189	5	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	15464	4	-18	0	3prime_fragment	FALSE	canonical	3	614	junction_2	19.8037243971936	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTCATAGTGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	31362445	31360011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341
tx.9312	chr5	-	2180	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	127	0	5	0	multi-exon	FALSE	canonical	3	595	junction_8	38.6382398699386	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTCATAGTGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	31377904	31360011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
tx.9313	chr5	+	2170	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	33	0	2	0	multi-exon	FALSE	canonical	3	461	junction_13	30.9676692663879	67	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTGCTTGCGGC	NA	False	NA	NA	False	NA	NA	NA	31398240	31408910	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
tx.9314	chr5	+	932	7	FSM	ENSMUSG00000029149.15	ENSMUST00000054829.13	904	7	-23	-5	-8	0	multi-exon	FALSE	canonical	3	42	junction_6	21.1344899788631	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATTACAGTTACTTG	NA	False	NA	NA	False	NA	NA	NA	31409026	31410546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410441
tx.9315	chr5	+	927	7	FSM	ENSMUSG00000029149.15	ENSMUST00000201937.4	889	7	-38	0	-4	0	multi-exon	FALSE	canonical	3	67	junction_1	11.9361728465293	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	NA	False	NA	NA	NA	31409030	31410541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
tx.9316	chr5	+	1090	5	NIC	ENSMUSG00000029149.15	novel	1027	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_4	5.61248608016091	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATTACAGTTACTTG	NA	False	NA	NA	False	NA	NA	NA	31409059	31410546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_31409448_31409535_31409596_31409708_31410134_31410238_31410347_31410437
tx.9317	chr5	+	3271	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	28	0	13	0	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7174	False	NA	NA	False	NA	NA	NA	31609806	31639098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
tx.9318	chr5	+	3232	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	77.4128093764563	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7154	False	NA	NA	False	NA	NA	NA	31609786	31639098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
tx.932	chr10	-	1838	11	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	6193	123	6138	8	3prime_fragment	FALSE	canonical	3	282	junction_6	30.7954542099966	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	62279324	62265110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173
tx.9320	chr5	-	1301	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1205	2	intron_retention	FALSE	canonical	3	124	junction_1	0	16	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	717	False	NA	NA	False	NA	NA	NA	31646497	31643974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_31645206_31646427
tx.9321	chr5	-	1429	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1205	2	intron_retention	FALSE	canonical	3	94	junction_1	0	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	717	False	NA	NA	False	NA	NA	NA	31646497	31643974	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_31645334_31646427
tx.9322	chr5	+	1648	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	9	1487	-2	558	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	182	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTAAGCTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	31652093	31668761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
tx.9323	chr5	+	909	5	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	10211	1487	-2109	558	3prime_fragment	FALSE	canonical	3	920	junction_2	60.462281630782	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTAAGCTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	31662295	31668761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
tx.9324	chr5	-	2653	5	FSM	ENSMUSG00000053134.14	ENSMUST00000065388.11	2693	5	35	5	-2	1	multi-exon	FALSE	canonical	3	72	junction_3	3.34477204006491	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTATTCCAATTCTT	NA	False	NA	NA	False	NA	NA	NA	31684082	31671912	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680606_31683958
tx.9325	chr5	+	2128	8	FSM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	-19	0	-2	0	multi-exon	FALSE	canonical	3	90	junction_1	11.004637241469	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTTGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	31684336	31694166	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481
tx.9326	chr5	+	2427	13	FSM	ENSMUSG00000029141.17	ENSMUST00000114533.9	2424	13	0	-3	0	2	multi-exon	FALSE	canonical	3	47	junction_10	19.394300422776	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGTGATGATCATTC	NA	False	NA	NA	False	NA	NA	NA	31684338	31711384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082
tx.9327	chr5	+	446	3	NNC	ENSMUSG00000106918.4	novel	478	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1166.5	257	2	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	NA	False	NA	NA	NA	31771303	31779988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_31771375_31773724_31773832_31779720
tx.9328	chr5	-	1023	8	FSM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	19	0	19	0	multi-exon	FALSE	canonical	3	28	junction_1	7.57816411992848	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGTGTGGCTACTCATC	NA	False	NA	NA	False	NA	NA	NA	31854952	31781782	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_31782001_31805064_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
tx.9329	chr5	-	1061	7	ISM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	12	23033	12	12573	5prime_fragment	FALSE	canonical	3	39	junction_2	4.14996653266291	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCAGGCATGCTCTGGA	NA	False	NA	NA	False	NA	NA	NA	31854959	31804815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
tx.933	chr10	-	2475	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5249	False	NA	NA	False	NA	NA	NA	62322533	62291050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
tx.9330	chr5	+	746	6	FSM	ENSMUSG00000052139.19	ENSMUST00000201202.4	715	6	-27	-4	-9	4	multi-exon	FALSE	canonical	3	657	junction_3	63.9606128801155	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATCGTTTAGCTCAAT	5855	False	NA	NA	False	NA	NA	NA	31855330	31988564	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428
tx.9331	chr5	+	1579	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	295	14	9	-14	multi-exon	FALSE	canonical	3	639	junction_9	56.490326824983	154	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTCTTTCAAGTCTTT	5847	False	NA	NA	False	NA	NA	NA	31855322	32242292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
tx.9332	chr5	+	2385	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-3	-5	intron_retention	FALSE	canonical	0	0	junction_1	552.155050687757	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACGTCTGAGTGATTAT	3071	False	NA	NA	False	NA	NA	NA	32616562	32650095	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_32616752_32640769_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
tx.9333	chr5	+	2774	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	418	2770	39	-3	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGTCTGAGTGATTATTC	3113	False	NA	NA	False	NA	NA	NA	32616604	32650097	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
tx.9334	chr5	+	4155	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	-18	-1480	-18	0	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	32768496	32844401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
tx.9335	chr5	+	2572	2	ISM	ENSMUSG00000014932.16	ENSMUST00000168707.6	2259	13	53001	0	24805	0	intron_retention	FALSE	canonical	3	877	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	32821679	32844401	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_32821745_32841894
tx.9336	chr5	-	2170	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	10	3	3	1	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	160	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	32942980	32893647	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
tx.9339	chr5	+	1612	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	152	0	90	0	multi-exon	FALSE	canonical	3	1727	junction_1	0	228	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTGGCCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	33176311	33185310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_33176499_33183885
tx.934	chr10	-	2553	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	49	-5	-10	0	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	348	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5247	False	NA	NA	False	NA	NA	NA	62322535	62291050	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
tx.9340	chr5	+	2146	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	45	2	-7	-2	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	131	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	33492897	33530638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
tx.9341	chr5	-	593	2	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGTATAGTCCAGGC	NA	False	NA	NA	False	NA	NA	NA	33692866	33649407	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_-_33649893_33692758
tx.9343	chr5	-	1987	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	16	6	3	3	multi-exon	FALSE	canonical	3	127	junction_2	26.6187903556867	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	33786963	33757696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
tx.9344	chr5	-	1681	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	225	0	4	0	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	238	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	33809693	33797398	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
tx.9345	chr5	-	2331	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	497	0	-20	0	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTCATTTTGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	33815263	33810559	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
tx.9346	chr5	+	2411	14	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-28	0	4	0	intron_retention	FALSE	canonical	3	792	junction_7	85.2006333837612	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	33815901	33829542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
tx.9347	chr5	+	2209	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-22	0	10	0	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	33815907	33829542	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
tx.9348	chr5	-	1484	9	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	21897	2644	-7358	217	3prime_fragment	FALSE	canonical	3	324	junction_8	49.848363814673	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTTTAATTTTCATCA	NA	False	NA	NA	False	NA	NA	NA	33918264	33899660	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066
tx.935	chr10	-	1338	4	NNC	ENSMUSG00000020077.15	novel	1727	4	NA	NA	-6258	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	4.10960933531265	10	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGCTATGTGACATGGT	NA	False	NA	NA	False	NA	NA	NA	62350134	62330205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_62330886_62333557_62333703_62343420_62343616_62349816
tx.9350	chr5	-	2217	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	104	259	-59	-259	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	70	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACAGAGCTGTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	34093653	34055518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
tx.9351	chr5	+	478	4	FSM	ENSMUSG00000070858.13	ENSMUST00000114383.8	511	4	33	0	-7	0	multi-exon	FALSE	canonical	3	25	junction_1	4.98887651569859	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCCTGTATTTTG	NA	False	NA	NA	False	NA	NA	NA	34140846	34142353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_34140984_34141100_34141241_34141395_34141485_34142241
tx.9352	chr5	+	396	4	FSM	ENSMUSG00000070858.13	ENSMUST00000094869.12	477	4	77	4	0	0	multi-exon	FALSE	canonical	3	9	junction_1	12.3648246606609	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCCTGTATTTTG	NA	False	NA	NA	False	NA	NA	NA	34140853	34142353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_34140909_34141100_34141241_34141395_34141485_34142241
tx.9353	chr5	-	1988	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	74	11	-1	-11	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACTATGCCTGCTGTG	9400	False	NA	NA	False	NA	NA	NA	34326797	34311234	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
tx.9354	chr5	-	2920	4	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	87	12	-7	-12	intron_retention	FALSE	canonical	3	453	junction_3	32.3144274623924	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTACTATGCCTGCTGT	9413	False	NA	NA	False	NA	NA	NA	34326784	34311235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748
tx.9355	chr5	+	2889	7	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	981.947667761486	11	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	NA	False	NA	NA	NA	34493733	34510780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
tx.9356	chr5	+	2922	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	95	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	NA	False	NA	NA	NA	34493757	34510780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
tx.9357	chr5	+	2904	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	1293	junction_4	355.934919144872	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	NA	False	NA	NA	NA	34493761	34510780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
tx.9358	chr5	+	2619	5	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	-4324	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	963.39669269725	9	2	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	NA	False	NA	NA	NA	34504135	34510780	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
tx.936	chr10	-	1136	4	FSM	ENSMUSG00000020077.15	ENSMUST00000160987.8	1727	4	-3	594	-3	1	multi-exon	FALSE	canonical	2	4	junction_3	6.34209919681348	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGCTATGTGACATGGT	NA	False	NA	NA	False	NA	NA	NA	62363233	62330205	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62330886_62333557_62333703_62343420_62343616_62363117
tx.9360	chr5	-	1999	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	-5	-7	-5	7	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGGCTGGAATGTGTG	NA	False	NA	NA	False	NA	NA	NA	34671340	34653423	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
tx.9361	chr5	-	2208	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-24	9	intron_retention	FALSE	canonical	3	117	junction_4	10.0623058987491	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCTGGAATGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	34671359	34653421	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_34654295_34656523_34657081_34658251_34658342_34660880_34661172_34670962
tx.9362	chr5	-	1698	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114331.10	1754	13	58	-2	-14	-2	multi-exon	TRUE	canonical	3	36	junction_12	99.4937183946806	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCGTCTTACTATTCT	NA	False	NA	NA	False	NA	NA	NA	34794498	34790987	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
tx.9363	chr5	-	1864	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	40	3	-9	1	multi-exon	FALSE	canonical	3	174	junction_12	65.1670929227321	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	NA	False	NA	NA	NA	34794493	34790988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
tx.9364	chr5	-	1866	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	43	-3	-9	0	multi-exon	FALSE	canonical	3	69	junction_12	91.0092715057098	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	NA	False	NA	NA	NA	34794493	34790989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
tx.9365	chr5	-	1714	13	NIC	ENSMUSG00000001082.13	novel	1754	13	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_12	101.567164422804	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	NA	False	NA	NA	NA	34794513	34790989	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794442
tx.9366	chr5	-	2671	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	31	0	31	0	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	142	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGTGGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	34817461	34795879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
tx.9367	chr5	-	1445	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	58	1478	-12	90	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCGAGTCCTTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	35263052	35250322	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
tx.9369	chr5	-	2680	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	0	1110	0	-1110	multi-exon	FALSE	canonical	3	72	junction_3	7.3	17	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATGTCCTGGGATCAG	7626	False	NA	NA	False	NA	NA	NA	35732414	35714656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
tx.937	chr10	-	2804	6	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	14242	3	2138	-3	3prime_fragment	FALSE	canonical	3	611	junction_2	49.6282177798075	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTAGTTCTTGGTGGCT	NA	False	NA	-37	True	NA	NA	NA	62423818	62416032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782
tx.9371	chr5	+	1957	15	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	19.8329760443437	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCCCAAACAGCCTAAG	1513	False	NA	NA	False	NA	NA	NA	35915223	36015530	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169
tx.9372	chr5	+	975	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	170	2383	170	-2383	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	1030	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTGCACAGTCTACC	NA	False	NA	NA	False	NA	NA	NA	36622511	36629041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
tx.9373	chr5	-	1287	3	NNC	ENSMUSG00000029190.20	novel	2014	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_1	14.5	1	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGTATTATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	36853305	36828742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_36829428_36830091_36830587_36853198
tx.9374	chr5	-	1566	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	36	46	36	-46	multi-exon	FALSE	canonical	3	1678	junction_1	0	570	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCCCGGAGAGTTACTA	NA	False	NA	NA	False	NA	NA	NA	36954080	36952256	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_36953289_36953546
tx.9375	chr5	-	756	5	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	2206	28	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	96.5012953280939	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGAGTAACCCCTCC	NA	False	NA	NA	False	NA	NA	NA	36968101	36964236	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36968011
tx.9376	chr5	-	3325	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	19	-14	19	14	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACCTCTCTTTTCACC	968	False	NA	NA	False	NA	NA	NA	36987978	36964250	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
tx.9378	chr5	+	2529	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	26.6327909832138	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	NA	False	NA	NA	False	NA	NA	NA	37185678	37282643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
tx.9379	chr5	+	1468	3	FSM	ENSMUSG00000063646.19	ENSMUST00000173836.8	849	3	-14	-605	-14	23	multi-exon	FALSE	canonical	3	99	junction_1	10.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTTTATTTAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	37185664	37249396	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_37185944_37242579_37242843_37248470
tx.938	chr10	-	3145	8	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	12416	-4	312	4	3prime_fragment	FALSE	canonical	3	611	junction_2	48.4502690542434	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGGTGGCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	62425644	62416025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556
tx.9380	chr5	+	557	2	NNC	ENSMUSG00000063646.19	novel	849	3	NA	NA	7	-45912	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTGCTGAGTGCAGTC	NA	False	NA	NA	False	NA	NA	NA	37185685	37196742	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_37185944_37196443
tx.9381	chr5	+	1038	2	NNC	ENSMUSG00000063646.19	novel	849	3	NA	NA	2843	41	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGAGTGGAGTGAGAGCT	3224	False	NA	NA	False	NA	NA	NA	37245556	37249414	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_37245651_37248470
tx.9382	chr5	+	2048	11	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5710	22702	0	0	internal_fragment	FALSE	canonical	3	147	junction_1	11.74265728019	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	2480	False	NA	NA	False	NA	NA	NA	37248423	37282643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
tx.9383	chr5	+	948	5	ISM	ENSMUSG00000050248.12	ENSMUST00000101258.5	2796	12	-132	36314	-23	-36314	5prime_fragment	FALSE	canonical	3	29	junction_3	3.16227766016838	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGGAAGAGTTTATTTC	8819	False	NA	NA	False	NA	NA	NA	37495819	37508794	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464
tx.9385	chr5	+	1555	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	501	946	-8	2	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTGCAGTCAGTGAGTC	NA	False	NA	NA	False	NA	NA	NA	38196586	38294163	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
tx.9387	chr5	-	2241	5	FSM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	340	0	-94	0	multi-exon	TRUE	canonical	3	5	junction_1	2.8613807855649	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGACTGTCTGTACTCA	NA	False	NA	NA	False	NA	NA	NA	38316911	38294535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
tx.9388	chr5	+	1516	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	40	7	-10	3	multi-exon	FALSE	canonical	3	2026	junction_5	151.553981719386	391	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTATCTATGATAACAA	NA	False	NA	NA	False	NA	NA	NA	38377853	38391643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
tx.9389	chr5	+	1609	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-8	4	combination_of_known_junctions	FALSE	canonical	3	190	junction_2	843.03156656333	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTATCTATGATAACAAA	NA	False	NA	NA	False	NA	NA	NA	38377855	38391644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_38377980_38380477_38380572_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
tx.939	chr10	-	2877	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-17	1862	-17	-1862	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTGTCGATCTTGT	NA	False	NA	NA	False	NA	NA	NA	62438077	62417891	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
tx.9390	chr5	+	1094	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	189	8	3	-8	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCATTTGGTTAATGC	NA	False	NA	NA	False	NA	NA	NA	38417717	38426970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
tx.9392	chr5	-	1650	7	FSM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	-15	0	-12	0	multi-exon	FALSE	canonical	3	424	junction_3	45.374980869295	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	41865512	41782318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
tx.9393	chr5	-	1748	8	FSM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	-51	0	-15	0	multi-exon	FALSE	canonical	3	81	junction_2	195.851880725393	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	41865515	41782318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
tx.9394	chr5	-	1569	6	NIC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_4	194.631549343882	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	41865520	41782318	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41860780_41860878_41865247
tx.9397	chr5	-	2843	11	FSM	ENSMUSG00000039753.17	ENSMUST00000047857.16	2858	11	15	0	2	0	multi-exon	FALSE	canonical	3	499	junction_3	32.2155242080584	69	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8843	False	NA	NA	False	NA	NA	NA	43939477	43901957	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
tx.9398	chr5	-	1245	6	FSM	ENSMUSG00000039753.17	ENSMUST00000143316.8	2731	6	-16	1502	0	-222	multi-exon	FALSE	canonical	3	545	junction_2	25.4762634622898	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTAGGAGTATTTCGG	8860	False	NA	NA	False	NA	NA	NA	43939460	43919875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
tx.9399	chr5	+	2143	9	FSM	ENSMUSG00000029082.18	ENSMUST00000101237.8	2856	9	-4	717	2	-197	multi-exon	FALSE	canonical	3	10	junction_6	2.97647022494766	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGAGAGTGCAGTTCTC	NA	False	NA	NA	False	NA	NA	NA	43976228	44000611	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_43976436_43977819_43977947_43978951_43979088_43979608_43979692_43982669_43982747_43983605_43983699_43994802_43994890_43997772_43997833_43999338
tx.94	chr1	+	1348	6	ISM	ENSMUSG00000026083.13	ENSMUST00000192548.6	5788	22	-5	29810	-5	-23229	5prime_fragment	FALSE	canonical	3	510	junction_5	62.9558575511445	403	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGAACGGTTAAA	1403	False	NA	NA	False	NA	NA	NA	38037204	38061292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244
tx.940	chr10	-	580	2	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-10	18225	-10	-9714	5prime_fragment	FALSE	canonical	3	474	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGGAAAGAAGCAAACG	NA	False	NA	NA	False	NA	NA	NA	62438070	62434254	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62434671_62437906
tx.9400	chr5	+	735	5	ISM	ENSMUSG00000029082.18	ENSMUST00000101237.8	2856	9	6442	1567	3831	9	3prime_fragment	FALSE	canonical	3	10	junction_2	2.48746859276655	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTATTTTCTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	43982674	43999761	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_43982747_43983605_43983699_43994802_43994890_43997772_43997833_43999338
tx.9401	chr5	+	2813	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	267	190	-40	-190	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGCTTGGTTTATTGA	NA	False	NA	NA	False	NA	NA	NA	44026161	44069527	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
tx.9402	chr5	-	1187	2	FSM	ENSMUSG00000048373.9	ENSMUST00000061299.9	1161	2	-24	-2	-9	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCCTTCTGATAC	NA	False	NA	NA	False	NA	NA	NA	44139130	44136199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_44137311_44139054
tx.9403	chr5	-	1343	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	37	0	-23	0	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	413	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	NA	False	NA	NA	NA	45607541	45591394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
tx.9404	chr5	-	1276	7	FSM	ENSMUSG00000015806.13	ENSMUST00000118097.8	1232	7	-44	0	21	0	multi-exon	FALSE	canonical	0	0	junction_6	385.068680742655	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	NA	False	NA	NA	NA	45607557	45591394	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607431
tx.9405	chr5	+	1803	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	55	409	55	-409	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	2770	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTTCAAGCCATATT	NA	False	NA	NA	False	NA	NA	NA	45650770	45669624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
tx.9406	chr5	-	1700	4	ISM	ENSMUSG00000015879.9	ENSMUST00000016023.9	4236	16	105190	3	2118	-3	3prime_fragment	FALSE	canonical	2	3	junction_1	1.24721912892465	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCACCACCTGTCTTATT	NA	False	NA	NA	False	NA	NA	NA	45691766	45687049	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_45688173_45689099_45689300_45690072_45690178_45691494
tx.9407	chr5	+	3287	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-6	422	-6	-3	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	41	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	45827254	45857466	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
tx.9408	chr5	-	2258	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	128	3322	1	-53	multi-exon	FALSE	canonical	3	11	junction_1	22.5197444232586	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGTTAGGACATTTTT	NA	False	NA	NA	False	NA	NA	NA	46014829	45857844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
tx.9409	chr5	-	2178	6	FSM	ENSMUSG00000015882.19	ENSMUST00000190036.7	5463	6	-34	3319	0	-53	multi-exon	FALSE	canonical	3	25	junction_1	19.1562000407179	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGTTAGGACATTTTT	NA	False	NA	NA	False	NA	NA	NA	46014843	45857844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_45859340_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
tx.941	chr10	-	2652	16	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	70.2071854505569	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8099	False	NA	NA	False	NA	NA	NA	62487004	62451793	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
tx.9410	chr5	+	1574	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	42	0	42	0	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	False	NA	NA	False	NA	NA	NA	48529712	48546187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
tx.9411	chr5	+	1481	8	FSM	ENSMUSG00000029089.9	ENSMUST00000200566.5	1422	8	-60	1	44	0	multi-exon	FALSE	canonical	3	22	junction_4	26.2717354134182	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	False	NA	NA	False	NA	NA	NA	48529714	48546187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48536671_48536807_48537465_48537574_48539128_48539210_48545444
tx.9412	chr5	-	1621	2	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	97299	-2	10368	2	3prime_fragment	FALSE	canonical	3	448	junction_1	0	38	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGCTGGTGGCTTAT	NA	False	NA	NA	False	NA	NA	NA	50119049	50117295	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_50118857_50118989
tx.9413	chr5	-	2995	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	4	11	4	-11	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCCCAAGTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	52347852	52307555	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
tx.9414	chr5	-	468	2	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	-21	30941	4	148	5prime_fragment	FALSE	canonical	3	854	junction_1	0	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACACACAGGACACACAT	NA	False	NA	NA	False	NA	NA	NA	52347852	52342008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_52342246_52347621
tx.9415	chr5	+	2137	4	FSM	ENSMUSG00000097145.6	ENSMUST00000180601.6	2120	4	-24	7	-17	-7	multi-exon	FALSE	canonical	0	0	junction_2	7.93025150224688	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGCAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	52347996	52355319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_52348280_52350259_52350939_52352142_52352233_52354234
tx.9416	chr5	+	1543	4	ISM	ENSMUSG00000097145.6	ENSMUST00000198720.2	837	6	-57	47894	-16	18	5prime_fragment	FALSE	canonical	2	5	junction_2	5.73488351136175	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGATATGT	NA	False	NA	NA	False	NA	NA	NA	52347997	52355344	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_52348280_52350259_52350321_52352142_52352233_52354234
tx.9417	chr5	-	1739	8	FSM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	189	4345	189	-4345	multi-exon	FALSE	canonical	3	32	junction_6	6.36636570147348	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCTCAGAGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	52723456	52695203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
tx.9418	chr5	-	2763	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	-1	2490	-1	-1401	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCTTTAGTAAAATTGG	NA	False	NA	NA	False	NA	NA	NA	52827051	52799918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
tx.9419	chr5	+	2802	12	FSM	ENSMUSG00000029179.15	ENSMUST00000031077.13	5743	12	13	2928	13	1459	multi-exon	FALSE	canonical	3	82	junction_6	13.7197450763007	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGCATTTTATAATTT	NA	False	NA	NA	False	NA	NA	NA	52940408	52977985	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
tx.942	chr10	-	2546	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	-11	0	-11	0	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8095	False	NA	NA	False	NA	NA	NA	62487008	62451793	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
tx.9420	chr5	+	2475	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	10	0	10	0	multi-exon	FALSE	canonical	3	81	junction_12	14.4327944472148	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	NA	False	NA	NA	NA	52940405	52982007	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
tx.9421	chr5	+	2700	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	91	1063	-23	0	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	120	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCATACTCTGTTCCA	NA	False	NA	NA	False	NA	NA	NA	52991444	53024076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
tx.9422	chr5	+	919	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	3	0	3	0	multi-exon	FALSE	canonical	3	318	junction_1	5	229	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3410	False	NA	NA	False	NA	NA	NA	53424482	53435882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_53424701_53434484_53434542_53435238
tx.9423	chr5	+	3946	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-23	1329	-23	-108	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTCCTACCACAGA	NA	False	NA	NA	False	NA	NA	NA	53713152	53813371	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
tx.9424	chr5	+	4040	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	84	1335	-70	-110	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCAGACTCCTACCACA	NA	False	NA	NA	False	NA	NA	NA	53747639	53813369	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
tx.9425	chr5	+	4015	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	208	1217	208	8	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTCAATATATGATGT	NA	False	NA	NA	False	NA	NA	NA	53748020	53813487	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
tx.9426	chr5	+	1128	2	ISM	ENSMUSG00000039191.13	ENSMUST00000201883.4	4961	11	62110	1800	7353	-1800	3prime_fragment	FALSE	canonical	3	521	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCTGTTCTCAGAATC	775	False	NA	NA	False	NA	NA	NA	53810432	53811679	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_53810528_53810646
tx.9427	chr5	+	2029	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	17	227	-4	0	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTTGTCAGTTTGTAAA	NA	False	NA	NA	False	NA	NA	NA	53966985	54061080	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
tx.9428	chr5	-	3057	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	7	177	7	-9	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	148	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTGAATGAGCGACAT	NA	False	NA	NA	False	NA	NA	NA	64126233	64066416	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
tx.9429	chr5	-	1697	2	ISM	ENSMUSG00000047881.15	ENSMUST00000087327.13	3093	8	44027	452	5981	-452	3prime_fragment	FALSE	canonical	3	541	junction_1	0	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCAAAGATATTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	64082139	64066859	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_64068495_64082077
tx.943	chr10	-	3862	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	85.6392222576133	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	False	NA	NA	False	NA	NA	NA	62628065	62580240	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
tx.9430	chr5	+	2332	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	-11	48	-11	-48	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	220	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTCTCAGTTACTTA	NA	False	NA	NA	False	NA	NA	NA	64250281	64285646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
tx.9431	chr5	-	1535	4	FSM	ENSMUSG00000105402.5	ENSMUST00000198582.5	2879	4	-27	1371	-27	0	multi-exon	FALSE	canonical	3	10	junction_2	4.89897948556636	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGTGAATCATTCACA	NA	False	NA	NA	False	NA	NA	NA	64768070	64752570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_64753667_64759324_64759493_64767442_64767499_64767855
tx.9432	chr5	+	2429	6	NNC	ENSMUSG00000029178.15	novel	298	4	NA	NA	-5724	596	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	263.203039496127	7	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACTTTTGAGGCAGTA	NA	False	NA	NA	False	NA	NA	NA	64955006	64987489	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
tx.9433	chr5	+	918	4	NNC	ENSMUSG00000029178.15	novel	4016	3	NA	NA	-5464	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	319.679005670793	28	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGCTGTGGATGGC	NA	False	NA	NA	False	NA	NA	NA	64955266	64980452	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221
tx.9434	chr5	+	649	6	ISM	ENSMUSG00000037890.14	ENSMUST00000204375.3	1924	12	-10	8523	-1	-8523	5prime_fragment	FALSE	canonical	3	27	junction_5	6.05309838016862	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTATAATTCCATATT	8584	False	NA	NA	False	NA	NA	NA	65357072	65373363	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145
tx.9435	chr5	-	4739	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	-40	0	9	0	multi-exon	FALSE	canonical	3	281	junction_12	79.0184138174275	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	NA	False	NA	NA	NA	65493004	65419194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
tx.9436	chr5	-	2469	10	ISM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	59913	0	-2041	0	3prime_fragment	TRUE	canonical	3	375	junction_1	73.5176135777872	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	3392	False	NA	NA	False	NA	NA	NA	65433051	65419194	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032
tx.9437	chr5	-	1662	13	ISM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	-27	17149	-24	-15505	5prime_fragment	FALSE	canonical	3	498	junction_1	41.5333701176937	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTCCAGCCAAGAAGGAG	-1	True	NA	NA	False	NA	NA	NA	65492988	65437093	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
tx.9438	chr5	-	547	5	ISM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	-27	40507	-24	7862	5prime_fragment	FALSE	canonical	3	537	junction_2	34.5144897108446	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAAACGTTAAGACTA	-1	True	NA	NA	False	NA	NA	NA	65492988	65460451	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
tx.9439	chr5	+	2689	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23570	0	23476	0	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	NA	False	NA	NA	NA	65529226	65541350	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
tx.944	chr10	-	388	2	ISM	ENSMUSG00000020074.8	ENSMUST00000220236.2	589	3	3718	-98	3718	0	3prime_fragment	FALSE	canonical	3	375	junction_1	0	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTAATTTCCAAGATA	9905	False	NA	NA	False	NA	NA	NA	62592410	62588953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62589193_62592261
tx.9440	chr5	-	725	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	13	0	13	0	multi-exon	FALSE	canonical	3	5084	junction_7	3201.89202994551	705	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	65548774	65545706	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
tx.9441	chr5	+	1603	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	54	11	7	-11	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	418	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATTTTTATTTGCGTG	6940	False	NA	NA	False	NA	NA	NA	65548893	65566539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
tx.9442	chr5	+	2073	10	NIC	ENSMUSG00000029199.12	novel	1668	11	NA	NA	46	-27	intron_retention	FALSE	canonical	3	315	junction_9	34.5289286480228	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTTTCTTAAAAAGATT	7000	False	NA	NA	False	NA	NA	NA	65548953	65566523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
tx.9443	chr5	-	2490	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	60	0	60	0	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	203	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	NA	False	NA	NA	NA	65593232	65570563	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
tx.9444	chr5	-	1142	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	458	2960	-61	0	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	185	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTTTAGAATCCAT	NA	False	NA	NA	False	NA	NA	NA	65650285	65607146	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
tx.9445	chr5	-	1007	5	FSM	ENSMUSG00000037822.13	ENSMUST00000121661.8	1056	5	48	1	48	0	multi-exon	FALSE	canonical	2	20	junction_4	163.329421721869	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTTTAGAATCCAT	NA	False	NA	NA	False	NA	NA	NA	65650355	65607146	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650283
tx.9446	chr5	+	914	6	FSM	ENSMUSG00000029203.17	ENSMUST00000202679.4	4682	6	-16	3784	-1	0	multi-exon	FALSE	canonical	3	526	junction_1	338.408628731597	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	65694617	65752488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_65694890_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
tx.9447	chr5	+	850	5	FSM	ENSMUSG00000029203.17	ENSMUST00000201984.4	1449	5	-8	607	7	3	multi-exon	FALSE	canonical	3	45	junction_1	582.178398345387	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATACTTTTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65694625	65752491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_65694890_65738728_65738812_65749218_65749319_65751762_65751892_65752217
tx.9448	chr5	+	995	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	58	3840	0	3	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	643	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATACTTTTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65694633	65752491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
tx.9449	chr5	+	902	7	FSM	ENSMUSG00000029203.17	ENSMUST00000201292.4	1529	7	20	607	5	3	multi-exon	FALSE	canonical	0	0	junction_2	633.60961079271	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATACTTTTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65694638	65752491	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_65694802_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
tx.945	chr10	-	2645	18	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	4	8712	4	1	5prime_fragment	FALSE	canonical	0	0	junction_4	91.878925898279	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTAATTTCCAAGATAG	NA	False	NA	NA	False	NA	NA	NA	62628061	62588952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
tx.9450	chr5	+	568	3	Antisense	novelGene_ENSMUSG00000029207.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	5	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTTGTATCTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	66499856	66502884	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_+_66499939_66500078_66500212_66502531
tx.9451	chr5	+	747	3	Antisense	novelGene_ENSMUSG00000029207.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	2.5	4	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGTGCTTGTATCTTTT	NA	False	NA	NA	False	NA	NA	NA	66499898	66502880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_+_66500212_66500896_66500982_66502531
tx.9452	chr5	+	1432	2	Antisense	novelGene_ENSMUSG00000029207.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	3	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGTGCTTGTATCTTTT	NA	False	NA	NA	False	NA	NA	NA	66499898	66502880	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_+_66500982_66502531
tx.9453	chr5	+	1023	8	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.588113506231	699	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	66833581	66844574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_66833675_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
tx.9454	chr5	+	1082	7	FSM	ENSMUSG00000029223.13	ENSMUST00000176015.5	980	7	-100	-2	-100	2	multi-exon	FALSE	canonical	3	449	junction_2	35.4479273802511	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	66834134	66844574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
tx.9455	chr5	-	847	2	Antisense	novelGene_ENSMUSG00000107300.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTGTATGGGAATCTT	NA	False	NA	NA	False	NA	NA	NA	66847297	66844670	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_66845383_66847162
tx.9456	chr5	+	1200	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	118	4929	-13	-127	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	305	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAATTTGTTTTACCC	NA	False	NA	NA	False	NA	NA	NA	67418025	67443875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
tx.9457	chr5	+	1635	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-14	3701	-13	1101	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	46	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTCTAATGATGTT	NA	False	NA	NA	False	NA	NA	NA	67418025	67445103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
tx.9458	chr5	+	1213	7	FSM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	22	4929	22	-127	multi-exon	FALSE	canonical	3	385	junction_4	35.264476932649	91	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAATTTGTTTTACCC	NA	False	NA	NA	False	NA	NA	NA	67418169	67443875	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
tx.9459	chr5	+	1888	8	ISM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	140	3451	32	1351	3prime_fragment	FALSE	canonical	3	67	junction_7	130.643931105482	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAAGTACAAGATGTGTT	NA	False	NA	NA	False	NA	NA	NA	67418179	67445353	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
tx.946	chr10	-	1009	2	ISM	ENSMUSG00000047146.18	ENSMUST00000050826.14	13986	11	40853	29036	-24620	5491	internal_fragment	FALSE	canonical	3	122	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCATATTATACACACCT	NA	False	NA	NA	False	NA	NA	NA	62674940	62669384	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_62669408_62673954
tx.9460	chr5	-	1853	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	44	-3	-3	3	multi-exon	TRUE	canonical	3	104	junction_4	11.5998084275369	150	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTCATTTTCTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	69749639	69732340	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
tx.9461	chr5	-	595	3	FSM	ENSMUSG00000049387.11	ENSMUST00000050129.6	542	3	-48	-5	-48	5	multi-exon	FALSE	canonical	3	51	junction_2	6	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTGTTGAAAACTATCA	NA	False	NA	NA	False	NA	NA	NA	71705596	71600161	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_71600613_71660793_71660857_71705515
tx.9462	chr5	-	1452	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	9	2434	9	2	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	465	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTGCTTGATTTCAG	NA	False	NA	NA	False	NA	NA	NA	72325523	72316351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
tx.9463	chr5	+	2857	8	ISM	ENSMUSG00000046808.18	ENSMUST00000136350.8	3488	12	12503	8	-2900	5	3prime_fragment	FALSE	canonical	3	109	junction_3	6.56521445318632	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAAACTGTCATTACTC	NA	False	NA	NA	False	NA	NA	NA	72434489	72456110	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
tx.9464	chr5	+	1384	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	11	128	-4	0	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	598	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	NA	False	NA	NA	NA	73450145	73471284	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
tx.9465	chr5	-	737	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	350	1467	-84	-320	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	67	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAATTCTCTCACCCCT	NA	False	NA	NA	False	NA	NA	NA	73495985	73481008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
tx.9466	chr5	+	4095	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	18	3	-16	-3	multi-exon	FALSE	canonical	3	110	junction_1	17.7721692542019	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGATTTGTGGGGTCTT	NA	False	NA	NA	False	NA	NA	NA	73648393	73718130	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
tx.9467	chr5	+	4082	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8233	-9	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.4034881952397	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAGAACTGATTTGTGG	8109	False	NA	NA	False	NA	NA	NA	73659977	73718124	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
tx.9468	chr5	-	1259	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	53	2474	53	-2474	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	35	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTACTATATCTTGTCC	NA	False	NA	NA	False	NA	NA	NA	73805080	73792565	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
tx.9469	chr5	+	1801	2	FSM	ENSMUSG00000106968.2	ENSMUST00000202711.2	848	2	1	-954	1	954	multi-exon	FALSE	canonical	3	15	junction_1	0	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGAATCTGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	74103724	74106673	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_74103968_74105115
tx.947	chr10	-	854	2	FSM	ENSMUSG00000047146.18	ENSMUST00000227494.2	553	2	128	-429	128	429	multi-exon	FALSE	canonical	3	182	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGATACCCAAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	62728637	62715222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62715913_62728473
tx.9470	chr5	-	3223	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	22	1312	11	-1312	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	NA	False	NA	NA	NA	74229070	74160698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
tx.9471	chr5	-	3162	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	3	-1312	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	NA	False	NA	NA	NA	74226406	74160698	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
tx.9472	chr5	+	580	3	FSM	ENSMUSG00000106943.3	ENSMUST00000120364.2	575	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	72	junction_1	23.5	98	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	74253732	74254998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_74253801_74254018_74254081_74254548
tx.9473	chr5	+	999	2	FSM	ENSMUSG00000106943.3	ENSMUST00000117249.2	1036	2	36	1	36	-1	multi-exon	FALSE	canonical	3	72	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTTCACTTGTTC	NA	False	NA	NA	False	NA	NA	NA	74253779	74254996	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_74253801_74254018
tx.9474	chr5	+	751	2	NIC	ENSMUSG00000106943.3	novel	575	3	NA	NA	36	0	intron_retention	FALSE	canonical	3	119	junction_1	0	29	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	74253779	74254998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_74254081_74254548
tx.9475	chr5	+	1808	4	FSM	ENSMUSG00000049907.9	ENSMUST00000051937.9	1812	4	2	2	2	-2	multi-exon	FALSE	canonical	2	8	junction_1	1.4142135623731	39	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTGACTGGGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	74355948	74360140	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_74356252_74356763_74356821_74357927_74358005_74358769
tx.9476	chr5	-	2366	9	FSM	ENSMUSG00000062110.15	ENSMUST00000072857.13	3672	9	33	1273	13	0	multi-exon	FALSE	canonical	3	48	junction_1	6.19979838381862	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCAAGCTGTCGCTAGC	NA	False	NA	NA	False	NA	NA	NA	74692377	74366749	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_74367057_74372911_74373032_74385975_74386111_74397099_74397246_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
tx.9477	chr5	+	2180	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	215.964760499897	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCTTGTAATATTTA	NA	False	NA	NA	False	NA	NA	NA	74696142	74756814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.9478	chr5	+	2120	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	1	54	combination_of_known_junctions	TRUE	canonical	3	110	junction_9	206.218767164378	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCTAAGAAAGTAATGTGA	NA	False	NA	NA	False	NA	NA	NA	74696140	74756860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.9479	chr5	+	2159	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	9	2601	1	54	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCTAAGAAAGTAATGTGA	NA	False	NA	NA	False	NA	NA	NA	74696140	74756860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.948	chr10	+	988	2	FSM	ENSMUSG00000036875.16	ENSMUST00000131715.2	603	2	-43	-342	11	342	multi-exon	FALSE	canonical	3	331	junction_1	0	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTATGATTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	62782815	62785816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_62782949_62784961
tx.9480	chr5	+	1994	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	42	2637	7	8	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCTTGTAATATTTA	NA	False	NA	NA	False	NA	NA	NA	74696151	74756814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.9481	chr5	+	1973	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	4	-8	1	8	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCTTGTAATATTTA	NA	False	NA	NA	False	NA	NA	NA	74696145	74756814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
tx.9482	chr5	+	606	3	ISM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	56413	-61	-2826	61	3prime_fragment	FALSE	canonical	3	796	junction_2	10	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAATGTGAATTAAGT	NA	False	NA	NA	False	NA	NA	NA	74752554	74756867	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_74752655_74755734_74755873_74756499
tx.9483	chr5	-	2555	11	FSM	ENSMUSG00000029228.16	ENSMUST00000117388.8	2564	11	9	0	9	0	multi-exon	FALSE	canonical	3	14	junction_9	3.95474398665704	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTAGAGGATTTCTT	NA	False	NA	NA	False	NA	NA	NA	74863564	74757764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452
tx.9484	chr5	+	611	3	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCTGCTTTAAGTGATG	NA	False	NA	NA	False	NA	NA	NA	75526606	75527652	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_75526760_75526842_75526923_75527274
tx.9485	chr5	+	5166	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	75	0	36	0	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	802	False	NA	NA	False	NA	NA	NA	75735650	75817382	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
tx.9486	chr5	+	1094	6	ISM	ENSMUSG00000005672.13	ENSMUST00000005815.7	5214	21	39	35774	39	-1	5prime_fragment	FALSE	canonical	3	1057	junction_5	106.091281451399	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGCACCAGCAGTGGATA	805	False	NA	NA	False	NA	NA	NA	75735653	75781608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506
tx.9487	chr5	+	1707	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	33	7	-2	-7	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	88	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCACGCCCTGGACTGG	NA	False	NA	NA	False	NA	NA	NA	76288150	76303319	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
tx.9488	chr5	+	1049	4	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	20376	0	136	0	3prime_fragment	FALSE	canonical	3	1062	junction_1	85.1756355355737	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	76352102	76357092	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_76352130_76352483_76352664_76355648_76355755_76356356
tx.9489	chr5	-	1157	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	13	11	-10	-11	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACATTTTGTATGTGT	NA	False	NA	NA	False	NA	NA	NA	76478990	76459984	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
tx.949	chr10	+	1490	5	ISM	ENSMUSG00000036875.16	ENSMUST00000137378.2	2085	6	693	-5	693	0	3prime_fragment	FALSE	canonical	0	0	junction_4	111.755033443689	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	NA	False	NA	NA	NA	62802447	62809963	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
tx.9490	chr5	+	3351	19	FSM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	13	7	1	0	multi-exon	FALSE	canonical	3	86	junction_10	33.5248203611431	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATAATATTCTTAAG	NA	False	NA	NA	False	NA	NA	NA	76677170	76718134	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
tx.9491	chr5	+	3354	18	FSM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	-84	2	-37	0	multi-exon	FALSE	canonical	3	47	junction_10	35.7889816992977	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATAATATTCTTA	NA	False	NA	NA	False	NA	NA	NA	76677120	76718132	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
tx.9492	chr5	-	1251	6	ISM	ENSMUSG00000055923.17	ENSMUST00000146570.8	2264	13	14	13289	14	136	5prime_fragment	FALSE	canonical	3	18	junction_5	32.6521055982612	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	77053320	77043952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
tx.9493	chr5	-	1352	5	NIC	ENSMUSG00000055923.17	novel	1080	5	NA	NA	11	136	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	26.7301328092473	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	77053323	77043952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053117
tx.9494	chr5	-	3185	10	ISM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	24725	170	24312	-170	3prime_fragment	FALSE	canonical	3	550	junction_6	47.1682043984381	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCCTTGTTTTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	77074700	77061292	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637
tx.9495	chr5	-	1869	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	356	1756	-57	12	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	445	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCATCTGAGGATTCAT	NA	False	NA	NA	False	NA	NA	NA	77099069	77062878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
tx.9496	chr5	+	2061	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	423	-2	-47	2	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	1495	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCGCTGTGTGGTCTA	709	False	NA	NA	False	NA	NA	NA	77099576	77115354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
tx.9497	chr5	+	3590	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	23	12	-1	-12	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTAACAATGTTTCGG	NA	False	NA	NA	False	NA	NA	NA	77122552	77147772	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
tx.9498	chr5	+	1690	17	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	24	3253	0	-805	5prime_fragment	FALSE	canonical	3	245	junction_6	30.1931283572935	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGTAAGACTTTGAAGA	NA	False	NA	NA	False	NA	NA	NA	77122553	77144531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498
tx.9499	chr5	-	1107	3	FSM	ENSMUSG00000059325.15	ENSMUST00000113453.9	1113	3	10	-4	10	4	multi-exon	FALSE	canonical	3	24	junction_1	1.5	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTCTTTTTTTTTCTCG	3153	False	NA	NA	False	NA	NA	NA	77243114	77234830	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_77235664_77242712_77242870_77242997
tx.95	chr1	+	1141	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2181	592	-52	0	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	550	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGTGCAAAAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	39026869	39035727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
tx.950	chr10	+	1445	3	FSM	ENSMUSG00000020070.19	ENSMUST00000148259.2	1455	3	29	-19	0	19	multi-exon	FALSE	canonical	3	60	junction_1	6.5	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATCTTAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	62816030	62826091	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_62816112_62818449_62818624_62824901
tx.9500	chr5	-	631	4	FSM	ENSMUSG00000053030.12	ENSMUST00000065216.11	631	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTCGTCTTTTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	77359318	77352953	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_77353273_77354775_77354886_77357579_77357642_77359178
tx.9501	chr5	+	1941	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	6	5057	6	-5057	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCTGAGTGCAAATCAA	3702	False	NA	NA	False	NA	NA	NA	77413343	77429222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
tx.9502	chr5	-	2276	7	FSM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	17	-5	-8	5	multi-exon	FALSE	canonical	3	116	junction_4	16.2138486760204	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATCTGTGACCAAG	NA	False	NA	NA	False	NA	NA	NA	77457914	77442023	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
tx.9503	chr5	+	3798	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	347	0	3	0	multi-exon	TRUE	canonical	3	372	junction_9	39.992360381564	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	NA	False	NA	NA	NA	77458340	77497171	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
tx.9504	chr5	-	727	3	Antisense	novelGene_ENSMUSG00000037605.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	3.5	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTCGTAAATCATTAC	NA	False	NA	NA	False	NA	NA	NA	81703952	81701717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_81702330_81703680_81703745_81703901
tx.9505	chr5	-	3159	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	36	-3	0	3	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTTGTCTGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	86213406	86159879	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
tx.9506	chr5	-	5150	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	0	-1433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	9	1	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAGTTGTGTTATTC	7088	False	NA	NA	False	NA	NA	NA	86320662	86258578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
tx.9507	chr5	+	2354	14	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	12799	0	1377	0	3prime_fragment	FALSE	canonical	3	183	junction_10	31.6023742647858	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	86964890	86984518	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
tx.9508	chr5	-	1771	7	ISM	ENSMUSG00000044221.15	ENSMUST00000113234.8	2286	10	4380	11	119	-11	3prime_fragment	FALSE	canonical	3	476	junction_5	35.1650868523502	23	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGTGTAGAAGAATCAA	NA	False	NA	NA	False	NA	NA	NA	88819145	88807327	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020
tx.9509	chr5	-	2014	9	ISM	ENSMUSG00000044221.15	ENSMUST00000113234.8	2286	10	1922	-5	1448	-5	3prime_fragment	FALSE	canonical	3	466	junction_8	37.9570069288926	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTTCTGTATATTTTC	NA	False	NA	NA	False	NA	NA	NA	88821603	88807311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551
tx.951	chr10	-	1447	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	5	761	5	3	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	109	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTGCTACTTTTTAT	5786	False	NA	NA	False	NA	NA	NA	62859668	62851203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
tx.9510	chr5	+	2353	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	30	322	30	-322	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTCAGTTTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	88868759	88905526	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
tx.9511	chr5	+	2915	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	159	4	159	-4	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	68	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTCTGAGACTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	88913013	88931136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
tx.9512	chr5	+	2645	6	ISM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	4686	4	323	-4	3prime_fragment	FALSE	canonical	3	177	junction_5	13.6586968631711	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTCTGAGACTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	88917540	88931136	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
tx.9513	chr5	-	1308	6	FSM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	25	0	-4	0	multi-exon	FALSE	canonical	3	158	junction_3	53.4714877294432	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	NA	False	NA	NA	NA	90371835	90362582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370191_90371474
tx.9514	chr5	-	1318	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	170	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	NA	False	NA	NA	NA	90371842	90362582	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
tx.9515	chr5	-	1364	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	217	386	-116	-289	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	146	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATTTTCTTTTCTTTTC	1552	False	NA	NA	False	NA	NA	NA	92110710	92097148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
tx.9516	chr5	+	2944	4	NNC	ENSMUSG00000102644.6	novel	650	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_3	5.24933858267454	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGGGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	92110748	92119925	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_92110835_92112954_92113164_92114310_92114434_92117399
tx.9517	chr5	-	2723	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-61	-778	0	-5	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTATCTTGTTCTTCAG	NA	False	NA	NA	False	NA	NA	NA	92231578	92201580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
tx.9518	chr5	-	2598	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	48	1586	4	-15	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	62	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGCTTATTATTTATCT	NA	False	NA	NA	False	NA	NA	NA	92231368	92201590	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
tx.9519	chr5	-	1977	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	5	734	5	49	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCTGCACATTTTGT	NA	False	NA	NA	False	NA	NA	NA	92231367	92202309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
tx.952	chr10	-	1311	9	FSM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	325	-3	2	3	multi-exon	FALSE	canonical	3	177	junction_7	118.49762655851	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTGCTACTTTTTAT	5783	False	NA	NA	False	NA	NA	NA	62859671	62851203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859498
tx.9520	chr5	-	1895	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	0	2287	0	49	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	283	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCTGCACATTTTGT	NA	False	NA	NA	False	NA	NA	NA	92231578	92202309	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
tx.9521	chr5	+	3907	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	-4	-5	-4	2	multi-exon	TRUE	canonical	0	0	junction_12	100.480471444838	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCATTGTTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	92285792	92350659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
tx.9522	chr5	-	1821	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	4	589	-1	185	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	25	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTAGCTGTGAAGAGAAAA	9202	False	NA	NA	False	NA	NA	NA	92426025	92406106	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
tx.9523	chr5	-	2273	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	35	2712	0	19	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	32	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAACCACAGTAACAT	NA	False	NA	NA	False	NA	NA	NA	92457848	92434580	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
tx.9524	chr5	-	2318	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	29	5	29	-5	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	108	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTCTGTCTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	92583049	92563403	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
tx.9525	chr5	-	761	4	FSM	ENSMUSG00000034826.15	ENSMUST00000122893.2	631	4	-39	-91	-7	91	multi-exon	FALSE	canonical	3	581	junction_1	53.8908361618395	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTGTGTATGATTCTGA	NA	False	NA	NA	False	NA	NA	NA	92582989	92575788	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92576186_92578659_92578813_92578897_92578982_92582862
tx.9526	chr5	-	2036	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	-15	2677	-15	-2677	multi-exon	TRUE	canonical	3	99	junction_7	16.1496104397404	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGGGCCCTGG	NA	False	NA	NA	False	NA	NA	NA	92653511	92591849	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
tx.9527	chr5	-	1932	2	Antisense	novelGene_ENSMUSG00000029381.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGGTTGGGAGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	93072913	93070680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_93072414_93072714
tx.9528	chr5	+	2581	7	FSM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	-10	-1	-10	0	multi-exon	FALSE	canonical	3	45	junction_2	9.62057979310787	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATTCCTATTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	93416162	93424084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
tx.9529	chr5	-	2726	4	FSM	ENSMUSG00000034724.19	ENSMUST00000152490.8	3040	4	721	-407	721	407	multi-exon	FALSE	canonical	3	31	junction_1	4.78423336480244	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAAAGTACCTGAATAAA	NA	False	NA	NA	False	NA	NA	NA	96234071	96223027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000
tx.953	chr10	-	1402	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	5	761	5	3	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	75	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTGCTACTTTTTAT	5786	False	NA	NA	False	NA	NA	NA	62859668	62851203	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
tx.9530	chr5	+	1109	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	29	2293	0	-2293	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCCTCATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	96358002	96412275	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
tx.9531	chr5	+	1641	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	-45	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_1	1.64991582276861	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGCTTCTGTTACTTG	NA	False	NA	NA	False	NA	NA	NA	96941198	96993826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
tx.9532	chr5	-	3400	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	25	-1	25	1	multi-exon	FALSE	canonical	3	176	junction_1	0	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGTTAATAACATT	NA	False	NA	NA	False	NA	NA	NA	97540213	97530055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_97532729_97539486
tx.9533	chr5	+	223	2	ISM	ENSMUSG00000097516.8	ENSMUST00000180634.2	2530	4	-36	192630	-6	-192630	5prime_fragment	FALSE	canonical	2	3	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACCTTTTTGTACTG	NA	False	NA	NA	False	NA	NA	NA	97540269	97543354	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_97540367_97543228
tx.9534	chr5	-	426	2	ISM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	16309	4	2142	0	3prime_fragment	FALSE	canonical	3	4376	junction_1	0	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	NA	NA	NA	100110467	100108860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_100109193_100110373
tx.9535	chr5	-	1317	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	427	5067	113	0	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	NA	NA	NA	100126370	100108860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
tx.9536	chr5	-	1260	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	406	4	113	0	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	NA	NA	NA	100126370	100108860	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
tx.9537	chr5	-	1501	2	ISM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	3026	0	-128	0	3prime_fragment	FALSE	canonical	3	572	junction_1	0	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	NA	False	NA	NA	NA	100184055	100181435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_100182844_100183962
tx.9538	chr5	-	1673	3	ISM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	2569	0	72	0	3prime_fragment	FALSE	canonical	3	572	junction_1	273	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	NA	False	NA	NA	NA	100184512	100181435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_100182844_100183962_100184055_100184339
tx.9539	chr5	-	1688	4	ISM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	2344	0	-153	0	3prime_fragment	FALSE	canonical	3	572	junction_1	260.749347501048	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	NA	False	NA	NA	NA	100184737	100181435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720
tx.954	chr10	+	1416	3	FSM	ENSMUSG00000020072.16	ENSMUST00000130531.2	847	3	116	-685	116	0	multi-exon	FALSE	canonical	2	8	junction_1	1.5	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATTTGGTGAAATT	4445	False	NA	NA	False	NA	NA	NA	62890104	62894592	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_62890285_62892557_62892621_62893419
tx.9540	chr5	-	1443	8	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	110	junction_7	355.117974073693	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCGTCAGGTACTGCAT	NA	False	NA	NA	False	NA	NA	NA	100186769	100182578	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
tx.9541	chr5	-	1401	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	754	-6	-15	0	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	57	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	NA	False	NA	NA	NA	100186769	100182579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.9542	chr5	-	1296	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	312	1144	-15	0	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	228	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	NA	False	NA	NA	NA	100186769	100182579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.9543	chr5	-	2051	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	230	junction_1	297.206243239284	36	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	NA	False	NA	NA	NA	100186769	100182579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.9544	chr5	-	2415	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-41	0	-15	0	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	NA	False	NA	NA	NA	100186769	100182579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.9545	chr5	-	2700	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	934	junction_2	94.4681957062799	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	NA	False	NA	NA	NA	100186769	100182579	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
tx.9546	chr5	+	1814	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	24	-5	24	5	multi-exon	FALSE	canonical	3	460	junction_1	20.2918702932973	238	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATACAGACGTGTGGA	NA	False	NA	NA	False	NA	NA	NA	100187867	100216624	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
tx.9547	chr5	+	1446	7	FSM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	-11	-15	-11	15	multi-exon	FALSE	canonical	3	27	junction_6	172.72618021983	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTGGATTGTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	100187891	100216634	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657_100215801_100216154
tx.9548	chr5	-	1289	6	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-87	0	combination_of_known_splicesites	FALSE	canonical	3	466	junction_5	127.023462399669	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	100521430	100509507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238
tx.9549	chr5	-	4112	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-1	0	combination_of_known_splicesites	TRUE	canonical	2	64	junction_13	176.439469507251	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8107	False	NA	NA	False	NA	NA	NA	100564094	100509507	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
tx.955	chr10	+	3966	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-65	-3	17	-1	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	NA	False	NA	NA	NA	63079624	63153656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
tx.9550	chr5	-	304	4	ISM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	417	-8	257	8	3prime_fragment	FALSE	canonical	3	348	junction_3	11.0453610171873	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTGTTTTATTGAA	NA	False	NA	NA	False	NA	NA	NA	100576977	100568692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955
tx.9551	chr5	-	610	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	19	-3	0	3	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAATGTTGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	100577375	100568697	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
tx.9552	chr5	+	1624	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	124	7	-10	-7	multi-exon	FALSE	canonical	3	1193	junction_9	105.134834062424	648	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAGTGAGGTGTTCTAT	5397	False	NA	NA	False	NA	NA	NA	100666298	100695662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
tx.9553	chr5	-	1641	12	FSM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	115	1361	104	-1361	multi-exon	FALSE	canonical	2	11	junction_7	2.99862227317648	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAAGCCGAGGGGGGTG	NA	False	NA	NA	False	NA	NA	NA	100867467	100828710	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_100828897_100832845_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100846778_100846953_100856522_100856649_100859194_100859341_100867257
tx.9554	chr5	+	552	2	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGCCAAAACAATTTTT	NA	False	NA	NA	False	NA	NA	NA	100874876	100877128	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_100875028_100876727
tx.9555	chr5	-	1501	2	ISM	ENSMUSG00000035266.17	ENSMUST00000151201.2	1628	8	-23	12689	-2	-4097	5prime_fragment	FALSE	canonical	3	68	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTGGAGAGTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	100946466	100943734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_100944929_100946159
tx.9556	chr5	-	527	2	ISM	ENSMUSG00000035234.19	ENSMUST00000153302.8	1582	9	14776	0	1162	0	3prime_fragment	FALSE	canonical	3	80	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	100954030	100953057	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_100953318_100953763
tx.9557	chr5	+	905	3	NIC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-56	0	intron_retention	FALSE	canonical	3	132	junction_1	6	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTCCTTTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	101987964	101992198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_101988098_101989616_101989940_101991749
tx.9558	chr5	+	838	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-53	0	intron_retention	FALSE	canonical	0	0	junction_1	72	10	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTCCTTTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	101987967	101992198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_101988034_101989616_101989940_101991749
tx.9559	chr5	+	277	2	ISM	ENSMUSG00000029313.19	ENSMUST00000126335.2	1613	7	11	101021	11	-96188	5prime_fragment	FALSE	canonical	3	283	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGGAGTCCACGATTC	NA	False	NA	NA	False	NA	NA	NA	103840250	103863273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_103840470_103863215
tx.956	chr10	-	3445	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	408	52	408	-1	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTTTTAAAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	63174403	63154837	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
tx.9560	chr5	+	1485	8	NIC	ENSMUSG00000029310.14	novel	995	6	NA	NA	28	-10	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	99.0728447730687	32	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGACTTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	104194419	104213235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
tx.9561	chr5	+	666	3	ISM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	12766	10	12014	-10	3prime_fragment	FALSE	canonical	3	355	junction_1	1	46	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGACTTGTGTTTC	4884	False	NA	NA	False	NA	NA	NA	104207500	104213235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_104207649_104209539_104209625_104212802
tx.9562	chr5	+	1407	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	3	0	0	0	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	2719	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	NA	False	NA	NA	NA	104582986	104588916	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
tx.9563	chr5	+	2721	3	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_2	30.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTTGAATTAC	NA	False	NA	NA	False	NA	NA	NA	104719512	104732486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_104719638_104728353_104728481_104730017
tx.9564	chr5	+	2759	4	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_1	10.4243305140746	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTTGAATTAC	NA	False	NA	NA	False	NA	NA	NA	104719535	104732486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_104719638_104728353_104728481_104728722_104728784_104730017
tx.9565	chr5	+	2657	4	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_3	16.1314048434171	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTATGAATGTAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	104757294	104787743	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_104757425_104783724_104783852_104784093_104784155_104785404
tx.9566	chr5	+	297	2	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTGGTCTTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	104757285	104872199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_104757425_104872041
tx.9567	chr5	-	1479	7	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	73	10190	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	86.7437157506077	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGAAATTTTCTGCAAT	NA	False	NA	NA	False	NA	NA	NA	105007863	104950844	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_104963251_104963302_104964564_104964626_104964862_104964990_105007532
tx.9568	chr5	-	2644	5	FSM	ENSMUSG00000072774.11	ENSMUST00000186219.7	2904	5	267	-7	-10	7	multi-exon	FALSE	canonical	3	35	junction_4	90.557647385519	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTGTGCGTTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	105007669	104961027	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
tx.9569	chr5	-	2791	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	70	2	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGAATTGTGCGTTTG	NA	False	NA	NA	False	NA	NA	NA	105007866	104961032	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
tx.957	chr10	+	1255	5	FSM	ENSMUSG00000036764.13	ENSMUST00000043317.7	3025	5	21	1749	13	0	multi-exon	TRUE	canonical	3	25	junction_2	1.58113883008419	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGCATTTAGGATGCAA	NA	False	NA	NA	False	NA	NA	NA	63222362	63244606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_63222555_63231563_63231643_63233017_63233158_63242780_63242986_63243967
tx.9570	chr5	+	3741	3	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-334	0	intron_retention	FALSE	canonical	3	23	junction_1	266.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4557	False	NA	NA	False	NA	NA	NA	105848320	105963076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_105848430_105880095_105880241_105959589
tx.9571	chr5	+	3858	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	71	0	-6	0	multi-exon	FALSE	canonical	3	312	junction_1	122	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4962	False	NA	NA	False	NA	NA	NA	105848725	105963076	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_105848952_105880095_105880241_105959589
tx.9572	chr5	+	2679	12	FSM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	-12	0	-9	0	multi-exon	TRUE	canonical	3	25	junction_1	8.12708968677346	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTCTTTTGTCATGT	NA	False	NA	NA	False	NA	NA	NA	106024421	106063684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
tx.9573	chr5	-	453	2	FSM	ENSMUSG00000099061.2	ENSMUST00000124394.3	449	2	3	-7	0	7	multi-exon	FALSE	canonical	3	11	junction_1	0	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTCTGTGTGTTTGACAC	NA	False	NA	NA	False	NA	NA	NA	106722581	106705597	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_106705923_106722453
tx.9574	chr5	+	2930	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	31	0	-28	0	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	36	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	107112218	107132298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
tx.9575	chr5	+	1493	3	ISM	ENSMUSG00000111375.5	ENSMUST00000162298.4	1408	6	-34	18536	-34	-18536	5prime_fragment	FALSE	canonical	3	27	junction_1	1	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCCTGCCTATTCATTT	NA	False	NA	NA	False	NA	NA	NA	107585828	107600969	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_107586012_107593728_107593924_107599854
tx.9576	chr5	+	785	6	FSM	ENSMUSG00000089798.11	ENSMUST00000239050.2	795	6	12	-2	3	2	multi-exon	FALSE	canonical	2	3	junction_3	1.2	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTGAATGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	107682588	107696245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_107682675_107686995_107687090_107691785_107691880_107693553_107693723_107694066_107694146_107695982
tx.9577	chr5	+	772	3	NNC	ENSMUSG00000089798.11	novel	5249	3	NA	NA	3	-7739	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	3	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGTGTGATGGACTCCAG	NA	False	NA	NA	False	NA	NA	NA	107682605	107688504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_107682675_107686995_107687090_107687895
tx.9578	chr5	+	971	5	NNC	ENSMUSG00000089798.11	novel	797	6	NA	NA	-9	4309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.1650635094611	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAATGACTGAAATGAT	NA	False	NA	NA	False	NA	NA	NA	107682613	107703717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_107682675_107686995_107687090_107691785_107691880_107693553_107693723_107703164
tx.9579	chr5	-	1962	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	8	45	8	10	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	110	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTTATACCACCATAAAA	NA	False	NA	NA	False	NA	NA	NA	107745497	107696877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
tx.958	chr10	-	1108	2	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGACTTTCTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	66810454	66805486	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr10_-_66806523_66810382
tx.9580	chr5	-	1976	19	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	56.5136550744733	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCATTATACTTTATA	NA	False	NA	NA	False	NA	NA	NA	107745498	107696888	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745409
tx.9581	chr5	-	1353	6	ISM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	6	24120	6	-807	5prime_fragment	FALSE	canonical	3	217	junction_2	26.7536913340944	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGACAGTACTGAATTT	NA	False	NA	NA	False	NA	NA	NA	107745499	107720952	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
tx.9582	chr5	+	1359	12	NIC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	9	-5	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	44.7710428847903	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCACTTTTTCAGAAGC	NA	False	NA	NA	False	NA	NA	NA	107745570	107809699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
tx.9583	chr5	+	1541	7	ISM	ENSMUSG00000033773.15	ENSMUST00000112654.8	2914	12	4	23796	0	12138	5prime_fragment	FALSE	canonical	3	138	junction_1	9.8952850725316	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTTGATGAGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	107745586	107766992	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006
tx.9584	chr5	+	2280	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	-14	2	0	-2	multi-exon	FALSE	canonical	3	138	junction_1	12.1951720866178	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTTTTCAGAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	107745586	107809702	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
tx.9585	chr5	+	1061	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	31	953	31	2	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	485	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGTTAAGCTGTT	NA	False	NA	NA	False	NA	NA	NA	108048398	108055918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
tx.9586	chr5	-	1770	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	40	911	-12	739	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATTTACTGTGTACTT	NA	False	NA	NA	False	NA	NA	NA	108134911	108056829	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
tx.9587	chr5	+	2621	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	47	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	8	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTCGTCTTAATAT	NA	False	NA	NA	False	NA	NA	NA	108208605	108255383	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.9588	chr5	+	3875	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	4	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	108208605	108256870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.9589	chr5	+	3131	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	-94	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	42	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	108208605	108256041	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.959	chr10	-	1805	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	8	0	8	0	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	False	NA	NA	False	NA	NA	NA	67121076	67102467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
tx.9590	chr5	+	3634	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	-68	494	0	240	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATTTCTTGTCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	108213539	108256376	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.9591	chr5	+	3357	10	ISM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	9777	-1534	946	0	3prime_fragment	FALSE	canonical	3	1473	junction_1	115.345321577759	105	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	108235807	108256870	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
tx.9592	chr5	-	1458	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	27	2315	-10	-881	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	108280459	108271807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
tx.9593	chr5	+	1174	4	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-104	94045	-65	8	5prime_fragment	FALSE	canonical	2	80	junction_2	5.90668171555645	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCGCAAGAATCTTTGG	1039	False	NA	NA	False	NA	NA	NA	108280675	108287449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779
tx.9594	chr5	+	3065	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	20	0	20	0	multi-exon	FALSE	canonical	3	201	junction_1	9	46	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTATATTTAATGAT	NA	False	NA	NA	False	NA	NA	NA	108416782	108428392	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_108417676_108423434_108423599_108426384
tx.9595	chr5	-	312	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	50	9	-1	-7	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	1087	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGGCTTCCTCTCTCT	5552	False	NA	NA	False	NA	NA	NA	108582264	108581118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
tx.9596	chr5	+	1558	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	38	6112	38	4574	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAGAGGCTTGCAGCAA	NA	False	NA	NA	False	NA	NA	NA	108609135	108648730	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
tx.9597	chr5	-	4454	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	-1	0	-1	0	multi-exon	FALSE	canonical	3	318	junction_10	27.4864725426801	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	NA	False	NA	NA	NA	108777606	108717279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
tx.9598	chr5	+	2442	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-8	1522	-8	-3	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCTTTTGAACATTGA	NA	False	NA	NA	False	NA	NA	NA	108777689	108795126	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
tx.9599	chr5	+	1438	10	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-16	3680	-16	-14	5prime_fragment	FALSE	canonical	3	99	junction_1	13.0251418797514	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGCATCTGACACTAC	NA	False	NA	NA	False	NA	NA	NA	108777681	108792968	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
tx.96	chr1	+	1083	5	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	5635	592	3378	0	3prime_fragment	FALSE	canonical	3	894	junction_3	53.7959106252511	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGTGCAAAAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	39030323	39035727	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr1_+_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
tx.960	chr10	-	1880	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	73.1619208787376	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	False	NA	NA	False	NA	NA	NA	67121071	67102467	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_-_67103946_67105804_67105926_67111348_67111434_67120875
tx.9600	chr5	+	1555	10	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-155	1557	22	-2	5prime_fragment	FALSE	canonical	3	25	junction_1	34.906223577529	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTACACTTTTCCTGAT	NA	False	NA	NA	False	NA	NA	NA	108777719	108792980	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
tx.9601	chr5	+	1526	3	ISM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	10601	-54	29	26	3prime_fragment	FALSE	canonical	3	107	junction_1	1	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTTTACCTGGG	NA	False	NA	NA	False	NA	NA	NA	108852968	108854816	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_108853006_108853084_108853439_108853681
tx.9602	chr5	-	1302	5	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	942	1624	intron_retention	FALSE	canonical	1	5	junction_2	24.2590189414164	3	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGGGACACGCAGTAAGG	NA	False	NA	NA	False	NA	NA	NA	109701080	109698133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_109698395_109699328_109699436_109699526_109700241_109700490_109700560_109700929
tx.9603	chr5	-	667	2	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	896	-6	896	0	intron_retention	FALSE	canonical	3	615	junction_1	0	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109703443	109702574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_109702937_109703138
tx.9604	chr5	-	525	3	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	889	-6	889	0	3prime_fragment	FALSE	canonical	3	516	junction_2	49.5	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109703450	109702574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_109702937_109703138_109703224_109703372
tx.9605	chr5	-	1048	5	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	2200	0	-263	0	3prime_fragment	FALSE	canonical	1	50	junction_4	239.958720408324	54	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	109704602	109702574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285
tx.9606	chr5	-	3146	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	196	-1	196	1	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCATGGTCATGGTATCT	6327	False	NA	NA	False	NA	NA	NA	109838711	109822409	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
tx.9607	chr5	-	2591	4	FSM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	-115	-475	-115	475	multi-exon	FALSE	canonical	3	85	junction_1	29.0631496343164	33	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCCATATGCCTTTTT	7831	False	NA	NA	False	NA	NA	NA	109899578	109883380	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_109885666_109886815_109886877_109887064_109887192_109899460
tx.9608	chr5	-	447	3	FSM	ENSMUSG00000072762.10	ENSMUST00000100937.4	599	3	152	0	-137	0	multi-exon	FALSE	canonical	3	125	junction_2	15.5	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTGATTAAATTCTCA	7809	False	NA	NA	False	NA	NA	NA	109899600	109886696	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_109886877_109887064_109887192_109899460
tx.9609	chr5	-	2021	4	NNC	ENSMUSG00000105471.2	novel	665	2	NA	NA	-2	-12826	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	67.6214955961983	55	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCTTGGTATT	NA	False	NA	NA	False	NA	NA	NA	109944166	109930098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_109931814_109932961_109933023_109933207_109933335_109944048
tx.961	chr10	+	2461	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	0	-215	0	215	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTAATCTGCTATTC	NA	False	NA	NA	False	NA	NA	NA	67815544	67878343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
tx.9610	chr5	-	2288	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10901	-114	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	42	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCAGGCAGTGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	109992912	109981480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
tx.9611	chr5	-	428	3	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	209	junction_2	23	29	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTGATTAAATTCTCA	NA	False	NA	NA	False	NA	NA	NA	109992921	109984496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_-_109984676_109984863_109984991_109992799
tx.9612	chr5	+	1064	2	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTTTTGCTTGAATT	NA	False	NA	NA	False	NA	NA	NA	110014292	110018029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_110014679_110017351
tx.9613	chr5	+	469	3	ISM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	234	2988	234	144	5prime_fragment	FALSE	canonical	3	75	junction_1	62	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGTGTCTCATTTGTG	NA	False	NA	NA	False	NA	NA	NA	110071499	110088814	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_110071633_110088291_110088419_110088605
tx.9614	chr5	+	2099	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	234	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	73.5369804928106	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGCTATC	NA	False	NA	NA	False	NA	NA	NA	110071499	110091802	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940_110090072_110090155
tx.9615	chr5	+	2647	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	264	-494	264	494	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTGAAGGCTCAGATTA	NA	False	NA	NA	False	NA	NA	NA	110071529	110092296	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
tx.9616	chr5	+	466	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	-10	-5	-9	5	multi-exon	FALSE	canonical	3	208	junction_1	18.5	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTCTGATTTGTGT	8361	False	NA	NA	False	NA	NA	NA	110144377	110155338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110144500_110154809_110154937_110155121
tx.9617	chr5	+	2089	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-9	1	-9	-1	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTCATGGTATCTT	8361	False	NA	NA	False	NA	NA	NA	110144377	110158276	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
tx.9618	chr5	-	2449	4	NNC	ENSMUSG00000090963.3	novel	1776	4	NA	NA	-11557	600	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6.94422221866655	7	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	110205909	110193404	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_110195551_110196887_110196949_110197131_110197259_110205794
tx.9619	chr5	+	378	2	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	10	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTTAGCTCCATCTT	NA	False	NA	NA	False	NA	NA	NA	110223273	110223750	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_110223459_110223557
tx.962	chr10	-	950	6	ISM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-184	5484	-184	-5484	5prime_fragment	TRUE	canonical	3	87	junction_5	23.2292918531754	22	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAGAGAACACCC	NA	False	NA	NA	False	NA	NA	NA	67972640	67937767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
tx.9620	chr5	-	428	3	ISM	ENSMUSG00000109771.2	ENSMUST00000210052.2	3523	4	0	4198	0	-1060	5prime_fragment	FALSE	canonical	3	35	junction_2	13	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGTGTCTGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	110242286	110228199	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_110228411_110228603_110228731_110242196
tx.9621	chr5	-	1067	7	FSM	ENSMUSG00000033434.16	ENSMUST00000127628.6	1481	7	417	-3	139	-1	multi-exon	FALSE	canonical	3	206	junction_1	14.1234635349203	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	NA	False	NA	NA	NA	110254651	110251841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518
tx.9622	chr5	-	1702	9	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	150	junction_8	32.0497659897853	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	NA	False	NA	NA	NA	110256063	110251841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
tx.9623	chr5	-	1616	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	0	1	0	-1	multi-exon	FALSE	canonical	3	93	junction_7	48.631900316511	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	NA	False	NA	NA	NA	110256063	110251841	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
tx.9624	chr5	+	3123	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	37	-2	37	2	multi-exon	TRUE	canonical	3	28	junction_1	12.7744862910412	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTTGTGAAGATGTCT	1986	False	NA	NA	False	NA	NA	NA	110257994	110277662	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
tx.9625	chr5	+	3224	19	FSM	ENSMUSG00000014668.16	ENSMUST00000198066.5	3201	19	-22	-1	-1	1	multi-exon	FALSE	canonical	3	66	junction_2	86.3223931292197	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	NA	False	NA	NA	NA	110283721	110319836	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
tx.9626	chr5	+	3153	18	FSM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	7	-1	-1	0	multi-exon	FALSE	canonical	3	248	junction_2	36.3883322871989	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	NA	False	NA	NA	NA	110283721	110319838	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
tx.9627	chr5	+	846	3	ISM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	21995	799	2259	-799	3prime_fragment	FALSE	canonical	3	258	junction_2	17	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGTCTGATATTTTG	NA	False	NA	NA	False	NA	NA	NA	110400864	110402536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_110401209_110401648_110401781_110402166
tx.9628	chr5	-	2025	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	14	5	14	-5	multi-exon	FALSE	canonical	3	390	junction_2	111.169420255752	133	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTTATTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	110417739	110407025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
tx.9629	chr5	-	2019	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	49	30	-10	-5	multi-exon	FALSE	canonical	3	275	junction_2	153.77594090104	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTTATTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	110417730	110407025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
tx.963	chr10	-	1387	9	ISM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	1	9418	1	-5484	5prime_fragment	FALSE	canonical	3	31	junction_8	48.863169923778	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAGAGAACACCC	5327	False	NA	NA	False	NA	NA	NA	68114569	67937767	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
tx.9630	chr5	-	1050	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	-18	9	-18	4	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	343	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	110434070	110422156	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
tx.9631	chr5	+	751	6	FSM	ENSMUSG00000007080.15	ENSMUST00000112482.2	747	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	245	junction_5	26.0967430918113	71	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTGTTCTGTTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	110434202	110439101	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824
tx.9632	chr5	+	677	4	FSM	ENSMUSG00000072754.10	ENSMUST00000100924.5	692	4	15	0	15	0	multi-exon	FALSE	canonical	3	17	junction_1	4.71404520791032	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTCCAGTCCATGTTTT	NA	False	NA	NA	False	NA	NA	NA	110501976	110503960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110502160_110502356_110502483_110502590_110502717_110503718
tx.9633	chr5	-	1873	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	35	167	-2	-167	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	16	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8876	False	NA	NA	False	NA	NA	NA	110801248	110796450	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
tx.9634	chr5	+	2538	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	10	2298	10	327	multi-exon	TRUE	canonical	3	94	junction_7	18.2382195693885	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTCCCGATAGCTCC	NA	False	NA	NA	False	NA	NA	NA	110801326	110806064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
tx.9635	chr5	-	2156	5	ISM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	0	0	0	0	intron_retention	FALSE	canonical	3	492	junction_3	32.6448694284416	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	110928462	110921532	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552
tx.9636	chr5	-	1412	2	ISM	ENSMUSG00000029507.17	ENSMUST00000112426.8	1389	4	4344	3	4344	-2	intron_retention	FALSE	canonical	3	571	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	NA	False	NA	NA	NA	110923489	110921535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_110921846_110922387
tx.9637	chr5	-	1095	3	ISM	ENSMUSG00000029507.17	ENSMUST00000112426.8	1389	4	4339	3	4339	-2	3prime_fragment	FALSE	canonical	3	530	junction_2	20.5	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	NA	False	NA	NA	NA	110923494	110921535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_110921846_110922387_110923080_110923401
tx.9638	chr5	-	1799	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	12	3	7	-2	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	104	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	NA	False	NA	NA	NA	110928450	110921535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
tx.9639	chr5	-	1508	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	0	2	0	-2	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	84	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	NA	False	NA	NA	NA	110928481	110921535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
tx.964	chr10	-	1253	8	FSM	ENSMUSG00000019945.11	ENSMUST00000020103.9	1262	8	16	-7	16	7	multi-exon	FALSE	canonical	0	0	junction_2	0.349927106111883	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTTTTGAATTAACAA	NA	False	NA	NA	False	NA	NA	NA	68377710	68266775	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_68267154_68272109_68272251_68272672_68272796_68345526_68345600_68352095_68352241_68361427_68361598_68369641_68369731_68377576
tx.9640	chr5	-	589	3	ISM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	8	6782	8	-6771	5prime_fragment	FALSE	canonical	3	372	junction_2	33.5	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTCTTTGTAAATCC	NA	False	NA	NA	False	NA	NA	NA	110987635	110983717	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_110983936_110984172_110984270_110987361
tx.9641	chr5	+	1896	5	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	2	-25	intron_retention	FALSE	canonical	3	57	junction_1	123.00076219276	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTTGGGATAAGCG	9184	False	NA	NA	False	NA	NA	NA	110987850	110997734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495
tx.9642	chr5	+	2286	15	FSM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	-15	5	2	-5	multi-exon	TRUE	canonical	3	120	junction_1	48.9833895211386	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	9184	False	NA	NA	False	NA	NA	NA	110987850	111022006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
tx.9643	chr5	+	1519	10	ISM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	15726	5	-10545	-5	3prime_fragment	FALSE	canonical	3	198	junction_1	24.6711707599511	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	NA	False	NA	NA	False	NA	NA	NA	111003591	111022006	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
tx.9644	chr5	+	2762	11	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	375.1786774325	113	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	111478619	111536225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
tx.9645	chr5	+	2701	10	NIC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	433.102702158834	10	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	111478595	111536225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
tx.9646	chr5	+	2727	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	418.665307853421	5	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	111478623	111536225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_111478700_111483360_111483392_111486179_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
tx.9647	chr5	+	2144	4	ISM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	49461	0	55	0	3prime_fragment	FALSE	canonical	3	814	junction_2	60.3894766402963	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	111528089	111536225	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_111528169_111530853_111530977_111533385_111533471_111534368
tx.9648	chr5	+	1814	7	FSM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	1	-2	1	2	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	74	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGAGTAGCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	112424573	112463223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
tx.9649	chr5	+	901	6	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.943779479539	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	112424573	112463222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_112424638_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
tx.965	chr10	-	1196	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	23	3156	-5	22	multi-exon	TRUE	canonical	3	2056	junction_1	102.156542539739	708	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGTGGTGGCTGTTA	NA	False	NA	NA	False	NA	NA	NA	69188745	69174131	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
tx.9650	chr5	+	1888	7	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.99956933606	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGAGTAGCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	112424576	112463223	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_112424638_112451765_112451838_112455431_112456421_112457554_112457754_112459549_112459601_112461107_112461157_112462756
tx.9651	chr5	+	1825	7	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	87.1615677284942	44	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	112436602	112463222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_112436679_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
tx.9652	chr5	+	3528	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	32	0	-31	0	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	15	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAAGTATATGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	112474255	112485939	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
tx.9653	chr5	+	402	2	ISM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	29	34021	12	-354	5prime_fragment	FALSE	canonical	3	34	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTGAAGTATCTGCTA	NA	False	NA	NA	False	NA	NA	NA	112490977	112492259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_112491030_112491909
tx.9654	chr5	+	2824	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	11	1	6	-1	multi-exon	FALSE	canonical	3	24	junction_1	21.6682900317355	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	112490971	112526279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
tx.9655	chr5	+	3266	13	ISM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	946	1	941	-1	3prime_fragment	FALSE	canonical	3	62	junction_9	13.6126983201552	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	112491906	112526279	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
tx.9656	chr5	+	529	3	NNC	ENSMUSG00000104807.2	novel	613	3	NA	NA	-37495	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCAAGGTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	112785745	112828454	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_112785898_112824588_112824815_112828303
tx.9657	chr5	-	724	4	ISM	ENSMUSG00000029352.15	ENSMUST00000076069.13	816	5	693	0	417	0	3prime_fragment	FALSE	canonical	3	12	junction_2	4.78423336480244	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTGTGTCACTTCC	NA	False	NA	NA	False	NA	NA	NA	113227840	113223704	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_113223938_113225400_113225544_113226248_113226382_113227625
tx.9658	chr5	-	1105	5	FSM	ENSMUSG00000042216.14	ENSMUST00000112324.2	1102	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	70	junction_3	10.6389614154766	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGTGGTGTCTGTCCAA	NA	False	NA	NA	False	NA	NA	NA	113428454	113421815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
tx.9659	chr5	-	1898	14	ISM	ENSMUSG00000042216.14	ENSMUST00000112325.8	2274	18	-16	8278	-16	0	5prime_fragment	FALSE	canonical	3	12	junction_13	30.0746605483851	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGAGTGGTGTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	113458621	113421817	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
tx.966	chr10	+	2715	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	209	832	209	-832	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGGTTTCAAGTTTGG	NA	False	NA	NA	False	NA	NA	NA	70081138	70120966	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
tx.9660	chr5	+	3214	8	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50760	5	1027	2	3prime_fragment	FALSE	canonical	3	32	junction_6	7.59430506285829	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCCAGTTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	113689072	113727781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
tx.9661	chr5	-	840	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	15	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTCTATGTGCAATCT	NA	False	NA	NA	False	NA	NA	NA	113734542	113711249	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_113711932_113734384
tx.9662	chr5	-	290	2	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	25	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGGGTTCTATCGTAGC	NA	False	NA	NA	False	NA	NA	NA	113734534	113734148	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_-_113734289_113734384
tx.9663	chr5	-	1763	5	ISM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	25780	-2	-1135	2	3prime_fragment	FALSE	canonical	3	426	junction_3	15.6264999280069	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGCATTGCAGCTGG	NA	False	NA	NA	False	NA	NA	NA	113884791	113880504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684
tx.9664	chr5	-	3591	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	858	-2	-14	2	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGCATTGCAGCTGG	NA	False	NA	NA	False	NA	NA	NA	113909713	113880504	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
tx.9665	chr5	-	3338	10	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	26608	-2	281	2	3prime_fragment	FALSE	canonical	3	905	junction_1	47.6610978357987	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGCTGTGCTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	114020211	113980494	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018
tx.9666	chr5	-	2202	2	ISM	ENSMUSG00000004530.13	ENSMUST00000164980.8	3136	9	63376	0	2291	0	3prime_fragment	FALSE	canonical	3	905	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	9019	False	NA	NA	False	NA	NA	NA	113983390	113980496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_113982530_113983221
tx.9667	chr5	-	3445	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	46	0	-7	0	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	114046773	113980496	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
tx.9668	chr5	-	2316	9	ISM	ENSMUSG00000042078.15	ENSMUST00000134790.8	1682	15	22272	-1163	-65	-52	3prime_fragment	FALSE	canonical	3	12	junction_8	2.91279504943276	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGGATTTAAATCTGGT	NA	False	NA	NA	False	NA	NA	NA	114181007	114165022	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866
tx.9669	chr5	+	1982	5	ISM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	19179	1793	8366	-1793	3prime_fragment	FALSE	canonical	3	48	junction_2	4.9180788932265	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCTTCTGGTCTAAGG	9280	False	NA	NA	False	NA	NA	NA	114257554	114260988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
tx.967	chr10	+	3192	15	NIC	ENSMUSG00000043259.16	novel	3380	15	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	7.71329358699535	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGTTGAAAGCACAGTAA	9878	False	NA	NA	False	NA	NA	NA	70276689	70394566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
tx.9670	chr5	-	708	3	ISM	ENSMUSG00000044339.13	ENSMUST00000053657.13	1073	4	471	0	471	0	3prime_fragment	FALSE	canonical	3	542	junction_2	7.5	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	8491	False	NA	NA	False	NA	NA	NA	114265766	114261986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_114262316_114263592_114263792_114265586
tx.9671	chr5	-	902	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	6	-9	6	0	multi-exon	FALSE	canonical	3	267	junction_3	133.312498372141	283	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7984	False	NA	NA	False	NA	NA	NA	114266273	114261986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
tx.9672	chr5	-	1080	4	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-2545	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_3	211.98480029369	59	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	5433	False	NA	NA	False	NA	NA	NA	114268824	114261986	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_114262316_114263592_114263792_114265586_114265831_114268516
tx.9673	chr5	+	1968	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	14	3	14	-1	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	177	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGTGCCGACTATTCT	NA	False	NA	NA	False	NA	NA	NA	114268460	114277381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
tx.9674	chr5	+	1893	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	242	1	-61	-1	multi-exon	FALSE	canonical	3	690	junction_3	32.487536071546	370	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGTGCCGACTATTCT	NA	False	NA	NA	False	NA	NA	NA	114269228	114277381	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
tx.9675	chr5	+	1624	4	ISM	ENSMUSG00000042010.17	ENSMUST00000143276.2	6680	41	48492	-2	-62	0	3prime_fragment	FALSE	canonical	3	58	junction_1	12.0369800568452	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	5498	False	NA	NA	False	NA	NA	NA	114386331	114388822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_114386380_114386644_114386816_114386935_114387073_114387554
tx.9676	chr5	+	1880	3	NIC	ENSMUSG00000042010.17	novel	8788	53	NA	NA	-53	0	intron_retention	FALSE	canonical	3	80	junction_1	3	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	5507	False	NA	NA	False	NA	NA	NA	114386340	114388822	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_114386816_114386935_114387073_114387554
tx.9677	chr5	-	3080	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	18	5	-1	-5	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACGCCGCCTTCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	114518551	114501632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
tx.9678	chr5	-	1177	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	40	1803	1	363	multi-exon	TRUE	canonical	3	162	junction_1	19.5604032422647	55	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAATGTCACATTTATA	NA	False	NA	NA	False	NA	NA	NA	114582081	114570897	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
tx.9679	chr5	-	1158	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	-19	138	10	-138	multi-exon	FALSE	canonical	3	177	junction_4	16.4738506458581	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAATCCTTCCTTCTGGGT	NA	False	NA	NA	False	NA	NA	NA	114582072	114572826	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
tx.968	chr10	-	1485	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	210	2472	210	510	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	386	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCTGAAATTATGTA	NA	False	NA	NA	False	NA	NA	NA	71073900	71063765	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
tx.9680	chr5	+	996	7	ISM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-20	7439	0	2	5prime_fragment	FALSE	canonical	3	117	junction_1	10.1063786238637	21	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGTCTGTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	114582346	114591213	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940
tx.9681	chr5	-	552	2	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGTATGTGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	114623990	114623310	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_-_114623687_114623814
tx.9682	chr5	-	1714	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	43	5	0	-5	multi-exon	TRUE	canonical	3	1353	junction_4	27.6541136180497	51	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTGTCTGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	114829002	114807463	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
tx.9683	chr5	+	2076	2	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	114835242	114838632	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_114835295_114836608
tx.9684	chr5	+	2885	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	-1	-2	-1	2	multi-exon	FALSE	canonical	2	32	junction_2	9.3392838174146	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTGTCACTGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	114845819	114860390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
tx.9685	chr5	-	2875	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	-11	2168	-11	0	multi-exon	FALSE	canonical	3	90	junction_6	46.75943160951	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	NA	False	NA	NA	NA	114911567	114867635	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.9686	chr5	-	2904	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCTGATGTCTCCATAA	NA	False	NA	NA	False	NA	NA	NA	114911539	114867638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.9687	chr5	-	713	5	ISM	ENSMUSG00000041890.18	ENSMUST00000153756.8	2091	12	-33	17210	-33	13	5prime_fragment	FALSE	canonical	3	229	junction_4	20.2036506602149	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTCTGCTCAGTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	114911589	114902589	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
tx.9688	chr5	+	1858	4	ISM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	26100	1	1206	-1	3prime_fragment	FALSE	canonical	3	412	junction_1	25.9401019444583	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGAGTTTCATTTCT	919	False	NA	NA	False	NA	NA	NA	114938837	114943882	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_114938874_114939716_114939878_114941617_114941686_114942289
tx.9689	chr5	-	1300	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	31	2	0	-2	multi-exon	FALSE	canonical	3	46	junction_1	0	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGTCTGCTGTTCTGT	750	False	NA	NA	False	NA	NA	NA	114952006	114946258	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_114947393_114951840
tx.969	chr10	-	1387	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	44	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	False	NA	NA	False	NA	NA	NA	71121048	71090809	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
tx.9690	chr5	-	582	2	FSM	ENSMUSG00000072694.9	ENSMUST00000061251.6	579	2	-3	0	-3	0	multi-exon	FALSE	canonical	3	102	junction_1	0	56	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTTGGCGTCCTTCT	747	False	NA	NA	False	NA	NA	NA	114952009	114950853	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_114951267_114951840
tx.9691	chr5	-	946	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	1	0	1	0	multi-exon	FALSE	canonical	3	282	junction_1	0	250	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTTGTGGGTGAT	9594	False	NA	NA	False	NA	NA	NA	114961528	114959995	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_114960787_114961373
tx.9692	chr5	+	269	3	FSM	ENSMUSG00000029559.16	ENSMUST00000140090.2	368	3	-44	143	-17	-143	multi-exon	FALSE	canonical	3	274	junction_1	5	188	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGCCCACGTGGCCAAGA	NA	False	NA	NA	False	NA	NA	NA	115080245	115084133	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_115080415_115083844_115083888_115084076
tx.9693	chr5	+	1336	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	37	1234	-9	765	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	304	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCCTGGTCAGTGCT	NA	False	NA	NA	False	NA	NA	NA	115080253	115086608	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
tx.9694	chr5	-	1842	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	28	0	-8	0	multi-exon	FALSE	canonical	3	425	junction_3	13.7822573362984	168	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9802	False	NA	NA	False	NA	NA	NA	115257377	115248357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
tx.9695	chr5	-	1932	9	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-16	0	intron_retention	FALSE	canonical	3	425	junction_3	14.5811307860536	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9794	False	NA	NA	False	NA	NA	NA	115257385	115248357	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
tx.9696	chr5	-	1044	5	FSM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	48	2567	-2	-155	multi-exon	FALSE	canonical	3	283	junction_1	7.58287544405155	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTAGCTGTGCACTGCTT	NA	False	NA	NA	False	NA	NA	NA	115272986	115263175	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115263560_115265069_115265243_115265360_115265473_115268525_115268640_115272725
tx.9697	chr5	-	1953	3	ISM	ENSMUSG00000048578.12	ENSMUST00000124678.2	505	4	691	-1708	691	1708	3prime_fragment	FALSE	canonical	3	1139	junction_2	15	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGCAGCAGGCTTTGC	NA	False	NA	NA	False	NA	NA	NA	115288414	115284456	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_115286204_115288127_115288186_115288266
tx.9698	chr5	-	1763	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	3	4189	3	936	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	50	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTGAGGACTTGATTT	4727	False	NA	NA	False	NA	NA	NA	115296235	115285228	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
tx.9699	chr5	-	600	2	ISM	ENSMUSG00000029544.17	ENSMUST00000112109.8	1071	7	8524	-25	8361	0	3prime_fragment	FALSE	canonical	3	238	junction_1	0	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	2809	False	NA	NA	False	NA	NA	NA	115310957	115306747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_115307208_115310817
tx.97	chr1	+	793	7	NNC	ENSMUSG00000026077.16	novel	484	3	NA	NA	4133	25541	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.93347457373532	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGGATTTTTCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	39237425	39352237	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr1_+_39237508_39302399_39302457_39326548_39326698_39331767_39331860_39339724_39339815_39350921_39351043_39352035
tx.970	chr10	-	747	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	99	238	99	-238	multi-exon	FALSE	canonical	3	1606	junction_1	82	1002	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTACATTGTACTTGTCA	1352	False	NA	NA	False	NA	NA	NA	71180685	71166547	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_71166957_71172043_71172250_71180553
tx.9700	chr5	-	824	3	ISM	ENSMUSG00000029544.17	ENSMUST00000112109.8	1071	7	8092	-25	7929	0	3prime_fragment	FALSE	canonical	3	234	junction_2	2	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	2377	False	NA	NA	False	NA	NA	NA	115311389	115306747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_115307208_115310817_115310966_115311173
tx.9701	chr5	-	1473	7	FSM	ENSMUSG00000029544.17	ENSMUST00000031519.14	1370	7	-103	0	-103	0	multi-exon	FALSE	canonical	3	35	junction_6	80.5826008239716	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	9804	False	NA	NA	False	NA	NA	NA	115324470	115306747	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115324070
tx.9702	chr5	+	820	2	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_1	0	28	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATAAAAACGAGTCTATT	651	False	NA	NA	False	NA	NA	NA	115341970	115343324	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_115342214_115342747
tx.9703	chr5	+	809	2	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTGGCAAACCTTTCT	665	False	NA	NA	False	NA	NA	NA	115341984	115343351	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_115342190_115342747
tx.9704	chr5	+	766	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2179	19	-17	6	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	254	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	NA	False	NA	NA	NA	115376073	115379031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
tx.9705	chr5	+	623	4	FSM	ENSMUSG00000060152.15	ENSMUST00000128830.5	575	4	-20	-28	-17	6	multi-exon	FALSE	canonical	3	53	junction_1	380.536755415587	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	NA	False	NA	NA	NA	115376073	115379031	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_115376129_115378220_115378371_115378531_115378616_115378697
tx.9706	chr5	-	970	7	ISM	ENSMUSG00000041740.17	ENSMUST00000112096.9	3112	17	25625	0	-1195	0	3prime_fragment	FALSE	canonical	3	1633	junction_2	42.0304122696358	552	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	NA	False	NA	NA	NA	115385329	115379828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227
tx.9707	chr5	+	2008	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	27	2	-2	-2	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	263	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTCAGATGTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	115417751	115435029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
tx.9708	chr5	+	1487	5	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	4874	2	892	-2	3prime_fragment	FALSE	canonical	3	495	junction_2	14.7033159525326	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTCAGATGTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	115422598	115435029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
tx.9709	chr5	+	1414	4	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	11268	2	7286	-2	3prime_fragment	FALSE	canonical	3	495	junction_1	6.12825877028341	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTCAGATGTCACTTTT	NA	False	NA	NA	False	NA	NA	NA	115428992	115435029	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_115429100_115432885_115432975_115433724_115433837_115433923
tx.971	chr10	+	1154	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-16	0	-15	0	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	81	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	72490711	72504997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
tx.9710	chr5	-	653	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	65	1312	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	4147	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	115438993	115436480	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115436893_115438571_115438710_115438890
tx.9711	chr5	-	1790	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	6	1	6	-1	multi-exon	FALSE	canonical	3	122	junction_1	3.5	48	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTGCTGATTTTTTA	9715	False	NA	NA	False	NA	NA	NA	115479231	115471298	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115472654_115473525_115473630_115478900
tx.9712	chr5	+	1063	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	9	16	9	-16	multi-exon	FALSE	canonical	3	209	junction_1	0	159	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGCTCCCAAAACCCT	2423	False	NA	NA	False	NA	NA	NA	115479292	115481612	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_115479477_115480733
tx.9713	chr5	-	536	3	FSM	ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	23	12	23	3	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	2653	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCGTGAGCTGGACG	4877	False	NA	NA	False	NA	NA	NA	115487017	115483712	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115483986_115486623_115486767_115486897
tx.9714	chr5	-	393	2	Antisense	novelGene_ENSMUSG00000054256.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCTTTAATCCCAGCCC	NA	False	NA	NA	False	NA	NA	NA	115583619	115582209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_115582508_115583524
tx.9715	chr5	+	793	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1159	-5	at_least_one_novel_splicesite	FALSE	canonical	3	2118	junction_4	157.856540884437	342	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTGGTGATTGTT	NA	False	NA	NA	False	NA	NA	NA	115603161	115612776	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_115603279_115604200_115604380_115608840_115609001_115610051_115610180_115612567
tx.9716	chr5	-	1219	4	ISM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	1364	-4	-77	4	3prime_fragment	FALSE	canonical	3	34	junction_3	4.54606056566195	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGACTGTGAACTTAC	NA	False	NA	NA	False	NA	NA	NA	115620992	115616064	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682
tx.9717	chr5	-	1444	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	350	0	-9	0	multi-exon	FALSE	canonical	3	34	junction_3	4.96865172858795	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGGACTGTGAAC	9370	False	NA	NA	False	NA	NA	NA	115622434	115616068	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622390
tx.9718	chr5	+	1099	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	47	212	-23	-212	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	13830	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	115697572	115701574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
tx.9719	chr5	-	1604	3	FSM	ENSMUSG00000041609.17	ENSMUST00000121746.8	1568	3	-31	-5	-26	0	multi-exon	FALSE	canonical	0	0	junction_2	16.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGCCTCAGTTCCTGG	NA	False	NA	NA	False	NA	NA	NA	115791071	115786233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_115787629_115789877_115789999_115790983
tx.972	chr10	+	1799	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	35	0	-15	0	multi-exon	FALSE	canonical	3	928	junction_7	94.1772102940808	636	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTCCTTGTTGCATT	NA	False	NA	NA	False	NA	NA	NA	72490711	72510796	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
tx.9720	chr5	+	2187	11	NIC	ENSMUSG00000029516.20	novel	2335	10	NA	NA	-46	422	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.3971770980332	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGCAAACAGGTGAC	8435	False	NA	NA	False	NA	NA	NA	115983290	116064190	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
tx.9721	chr5	-	2074	7	FSM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	15	0	4	0	multi-exon	FALSE	canonical	3	213	junction_6	10.0788557551606	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGACTCGGCACATTTT	NA	False	NA	NA	False	NA	NA	NA	116162506	116151644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149
tx.9722	chr5	-	1982	8	FSM	ENSMUSG00000029513.15	ENSMUST00000111999.8	2026	8	48	-4	-1	0	multi-exon	FALSE	canonical	3	151	junction_7	27.0313499024932	37	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGACTCGGCACATTTT	NA	False	NA	NA	False	NA	NA	NA	116162519	116151644	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
tx.9723	chr5	-	1815	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	-2	3	-2	-3	multi-exon	FALSE	canonical	3	315	junction_2	24.5	480	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGCTTCATTTAG	NA	False	NA	NA	False	NA	NA	NA	116560925	116546552	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_116547550_116553465_116553530_116560171
tx.9724	chr5	+	459	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	-7	2908	-7	481	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	77	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGTTGTTGTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	116576771	116600638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
tx.9725	chr5	+	520	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	-7	481	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	35	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGTTGTTGTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	116576771	116600638	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
tx.9726	chr5	-	1215	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	28	-3	-14	3	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	2419	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGGTATTTCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	117425662	117420715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
tx.9727	chr5	+	2300	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	121	0	120	0	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495489	117516666	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
tx.9728	chr5	-	1747	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	7	1042	5	472	multi-exon	TRUE	canonical	3	1613	junction_7	125.046431376509	470	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	NA	False	NA	NA	NA	117527105	117517209	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
tx.9729	chr5	+	2748	3	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	82457	-2259	30396	1804	3prime_fragment	FALSE	canonical	3	46	junction_1	6.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAAGCAAGGTGGCCAT	NA	False	NA	NA	False	NA	NA	NA	118087635	118094233	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_118087894_118090829_118090949_118091862
tx.973	chr10	-	2958	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	5	537	5	5	multi-exon	FALSE	canonical	3	66	junction_3	9.3893556754444	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTAGCACCCTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	75353210	75342653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
tx.9730	chr5	+	2410	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	39	1510	-5	129	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTTTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	118114833	118146756	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
tx.9731	chr5	+	1666	8	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	12093	1509	9553	129	3prime_fragment	FALSE	canonical	3	306	junction_5	58.9139808776927	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTTTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	118126941	118146756	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
tx.9732	chr5	+	2300	3	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	23602	192	21062	-192	3prime_fragment	FALSE	canonical	3	438	junction_1	4.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCAAAAGTTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	118138450	118148073	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_118138594_118140079_118140238_118146074
tx.9733	chr5	+	902	8	NIC	ENSMUSG00000029359.14	novel	785	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	22.6445470302252	20	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATCTGTCCCTCACAT	4351	False	NA	NA	False	NA	NA	NA	118174078	118199943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
tx.9734	chr5	+	2508	6	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	24	-2981	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.3255753472143	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTGTGGAATGTGG	1663	False	NA	NA	False	NA	NA	NA	118383315	118401177	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118399994_118400129
tx.9735	chr5	+	1057	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	17	4575	17	-4575	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	39	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTCTCATTTCCTGA	1656	False	NA	NA	False	NA	NA	NA	118383308	118399583	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
tx.9736	chr5	+	404	2	ISM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	144	13140	-12	-2079	5prime_fragment	FALSE	canonical	3	95	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCGAGAACCTTGCGCT	NA	False	NA	NA	False	NA	NA	NA	119809070	119809649	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_119809123_119809297
tx.9737	chr5	+	2925	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9217	0	-14	0	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	NA	False	NA	NA	NA	119818299	119822789	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_119819131_119820695
tx.9738	chr5	-	1218	8	ISM	ENSMUSG00000029596.14	ENSMUST00000031594.13	1476	9	5486	-1	36	1	3prime_fragment	FALSE	canonical	1	1	junction_2	1.82946406783796	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGCTCCCTGGGTTCT	7189	False	NA	NA	False	NA	NA	NA	120605389	120596265	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_120596617_120597509_120597635_120597820_120598049_120598671_120598761_120600041_120600182_120600910_120600951_120601096_120601291_120605338
tx.9739	chr5	-	971	4	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	16133	1965	16109	0	3prime_fragment	FALSE	canonical	3	256	junction_2	20.757863302587	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGGCCTTGAGTCTT	8728	False	NA	NA	False	NA	NA	NA	120625557	120623311	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494
tx.974	chr10	+	654	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	467	1915	4	48	multi-exon	FALSE	canonical	3	3512	junction_3	116.998575489904	1333	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGGCTTTTTTGTTT	1869	False	NA	-56	True	NA	NA	NA	75353851	75371300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
tx.9740	chr5	+	2886	16	FSM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	12	0	12	0	multi-exon	FALSE	non_canonical	0	0	junction_5	54.5084702897938	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	8	True	NA	NA	False	NA	NA	NA	120649244	120672089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
tx.9741	chr5	+	2553	13	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	12	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	57.0079794609686	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	8	True	NA	NA	False	NA	NA	NA	120649244	120672089	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
tx.9742	chr5	-	1574	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	77	junction_2	1.5	43	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTAGTGTGTTACTTTTT	6314	False	NA	NA	False	NA	NA	NA	120750655	120747122	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_120748028_120749442_120749795_120750338
tx.9743	chr5	+	2981	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	376	965	-12	0	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGAGTGTGGCTTCCT	NA	False	NA	NA	False	NA	NA	NA	120751179	120765692	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
tx.9744	chr5	+	906	4	ISM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	13186	963	4598	2	3prime_fragment	FALSE	canonical	3	562	junction_2	12.2292908852294	34	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGTGTGGCTTCCTCA	9874	False	NA	NA	False	NA	NA	NA	120763989	120765694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_120764105_120764465_120764571_120764898_120765015_120765124
tx.9745	chr5	+	1326	6	NNC	ENSMUSG00000029602.12	novel	486	2	NA	NA	-3807	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	10.6282642044691	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGCCGTGACGTGTTA	172	False	NA	NA	False	NA	NA	NA	120812850	120817656	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_120813041_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
tx.9746	chr5	-	1759	5	ISM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	12265	0	-223	0	3prime_fragment	FALSE	canonical	3	95	junction_3	13.57156954814	13	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	NA	False	NA	NA	NA	120821203	120818267	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125
tx.9747	chr5	-	1910	6	ISM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	11942	0	-546	0	3prime_fragment	FALSE	canonical	3	95	junction_3	14.7051011557214	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	NA	False	NA	NA	NA	120821526	120818267	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359
tx.9748	chr5	+	487	2	Antisense	novelGene_ENSMUSG00000032690.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	5	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTGAAACTTTAT	NA	False	NA	NA	False	NA	NA	NA	120872936	120874531	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_+_120873222_120874329
tx.9749	chr5	-	398	3	ISM	ENSMUSG00000066861.15	ENSMUST00000161809.2	769	4	1218	-222	1218	0	3prime_fragment	FALSE	canonical	3	316	junction_2	26.5	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	121016448	121014784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_121015091_121015245_121015273_121016383
tx.975	chr10	+	2286	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-86	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	109.844161410238	13	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTTAGTGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	75399895	75422030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr10_+_75400093_75400671_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
tx.9750	chr5	-	1405	7	FSM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	-8	580	-8	0	multi-exon	FALSE	canonical	3	61	junction_5	116.597241248096	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	121025653	121014784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835_121024125_121025442
tx.9751	chr5	+	2029	7	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25809	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.7487796249151	5	4	1	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	NA	False	NA	NA	NA	121026789	121059711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_121026866_121052662_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
tx.9752	chr5	+	2039	7	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25833	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.7487796249151	21	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	NA	False	NA	NA	NA	121026765	121059711	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_121026862_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
tx.9753	chr5	-	1196	6	ISM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	1635	463	1635	-463	3prime_fragment	FALSE	canonical	3	208	junction_1	176.329918051362	26	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	121043949	121034781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658
tx.9754	chr5	-	1418	7	FSM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	4	463	4	-463	multi-exon	FALSE	canonical	3	208	junction_1	161.447015732372	211	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	121045580	121034781	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
tx.9755	chr5	+	947	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	49	274	9	1	multi-exon	FALSE	canonical	3	7748	junction_1	3319.97705815367	5332	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	121342592	121347030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
tx.9756	chr5	+	926	6	ISM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	923	274	-5	1	3prime_fragment	FALSE	canonical	3	14010	junction_2	1238.46727853424	2986	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	121343466	121347030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
tx.9757	chr5	-	2484	12	FSM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	19	0	16	0	multi-exon	FALSE	canonical	3	16	junction_2	8.79894809640935	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATTCTTTCTATAG	3588	False	NA	NA	False	NA	NA	NA	121523676	121509787	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
tx.9758	chr5	+	3133	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	46	2268	-12	210	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGACCCTCATCTGG	NA	False	NA	NA	False	NA	NA	NA	121536044	121578204	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
tx.9759	chr5	+	2641	22	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	49	3599	-9	-10	5prime_fragment	FALSE	canonical	3	302	junction_8	46.1734873028366	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAAGAAACGAGCA	NA	False	NA	NA	False	NA	NA	NA	121536047	121576873	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790
tx.976	chr10	+	2272	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-55	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.4297600962574	27	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTTAGTGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	75399926	75422030	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
tx.9760	chr5	-	1270	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	5	3929	5	3	multi-exon	FALSE	canonical	3	820	junction_1	20.5	530	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTTTTTAGATA	3217	False	NA	NA	False	NA	NA	NA	121590564	121582815	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_121583636_121585203_121585343_121590253
tx.9761	chr5	+	1279	10	FSM	ENSMUSG00000029452.19	ENSMUST00000031405.12	1288	10	18	-9	18	9	multi-exon	FALSE	canonical	2	4	junction_4	6.43102050155013	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCTCTCTGCTCCA	NA	False	NA	NA	False	NA	NA	NA	121601232	121633493	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
tx.9762	chr5	+	1367	11	FSM	ENSMUSG00000029452.19	ENSMUST00000094357.11	1366	11	24	-25	24	-2	multi-exon	FALSE	canonical	3	13	junction_1	4.13400532171888	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCGTCATTTGCAAGC	NA	False	NA	NA	False	NA	NA	NA	121601238	121633482	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121620395_121620501_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
tx.9763	chr5	-	1956	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	232	1679	-10	172	multi-exon	TRUE	canonical	3	476	junction_10	93.9036148872283	608	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGGGGTCAGTTCTCTA	NA	False	NA	NA	False	NA	NA	NA	121731655	121705768	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
tx.9764	chr5	-	403	2	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-840	-1378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGACTCAGGCATCTATG	NA	False	NA	NA	False	NA	NA	NA	121736882	121736345	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_121736569_121736702
tx.9765	chr5	-	2237	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	1	-1379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7846483061999	5	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGACTCAGGCATCTAT	NA	False	NA	NA	False	NA	NA	NA	121757000	121736346	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
tx.9766	chr5	+	747	7	FSM	ENSMUSG00000013936.13	ENSMUST00000014080.13	662	7	-87	2	-87	-2	multi-exon	FALSE	canonical	3	15	junction_3	1.91485421551268	12	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTGACCATTGGCTC	3518	False	NA	NA	False	NA	NA	NA	122238926	122244915	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122239093_122239811_122239902_122240758_122240835_122241893_122241999_122242889_122242969_122243050_122243100_122244733
tx.9767	chr5	+	2292	6	FSM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	200	0	-37	0	multi-exon	FALSE	canonical	3	2504	junction_1	193.218425622403	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	122296618	122313332	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
tx.9768	chr5	+	2968	8	NIC	ENSMUSG00000064267.14	novel	2805	7	NA	NA	-49	-31	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	18.6153327191565	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACCCTTGCTGTCATGG	NA	False	NA	NA	False	NA	NA	NA	122344817	122380329	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_122345220_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
tx.9769	chr5	+	2660	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	105	25	-75	-25	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTGTCATGGGGCTTT	NA	False	NA	NA	False	NA	NA	NA	122347896	122380335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
tx.977	chr10	+	2145	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	89.9111987943607	17	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	NA	False	NA	NA	NA	75404480	75422034	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_75404601_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
tx.9770	chr5	-	2349	13	NNC	ENSMUSG00000038593.19	novel	5717	14	NA	NA	-15	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.1952370824978	9	3	1	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTGGCTGTATAACT	NA	False	NA	NA	False	NA	NA	NA	122402538	122379293	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122389653_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
tx.9771	chr5	-	1624	11	FSM	ENSMUSG00000038569.14	ENSMUST00000049009.7	1631	11	9	-2	-4	0	multi-exon	FALSE	canonical	3	7	junction_9	5.37494186015067	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGTCATTTTATATA	10001	False	NA	NA	False	NA	NA	NA	122492287	122463568	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
tx.9772	chr5	+	992	4	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.8626423516	287	2	1	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTGAAAACCTGTG	714	False	NA	NA	False	NA	NA	NA	122492466	122501350	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_122492540_122498067_122498268_122500098_122500335_122500867
tx.9773	chr5	+	984	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	35	1697	-2	1	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	814	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTGAAAACCTGTG	714	False	NA	NA	False	NA	NA	NA	122492466	122501350	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
tx.9774	chr5	-	1392	7	FSM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	-4	0	-4	0	multi-exon	FALSE	canonical	3	223	junction_4	23.7235232534199	239	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTTTAAATTATCTTT	NA	False	NA	NA	False	NA	NA	NA	122510431	122502642	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945
tx.9775	chr5	+	1519	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	73	0	-3	0	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	398	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8112	False	NA	NA	False	NA	NA	NA	122510586	122520965	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
tx.9776	chr5	+	877	7	FSM	ENSMUSG00000029465.15	ENSMUST00000102525.11	899	7	22	0	-22	0	multi-exon	FALSE	canonical	3	554	junction_4	26.4638117687784	690	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTGTACCGTGTATG	4510	False	NA	NA	False	NA	NA	NA	122529962	122544242	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122530061_122534879_122534980_122539709_122539787_122541421_122541491_122542186_122542314_122543146_122543242_122543931
tx.9777	chr5	+	2271	11	FSM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	20	460	-17	-460	multi-exon	FALSE	canonical	3	226	junction_7	29.6310647800581	171	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGAGACTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	122560526	122582515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
tx.9778	chr5	+	1615	7	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	10962	460	-5968	-460	3prime_fragment	FALSE	canonical	3	226	junction_3	23.5914297056273	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGAGACTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	122571468	122582515	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
tx.9779	chr5	+	1129	4	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	16973	455	43	-455	3prime_fragment	FALSE	canonical	3	238	junction_1	8.28653526310404	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTCTTCCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	122577479	122582520	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_122577579_122578148_122578374_122579352_122579504_122581866
tx.978	chr10	+	604	2	ISM	ENSMUSG00000006344.18	ENSMUST00000218807.2	2051	11	20796	-4	6316	4	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGTTCTAAGCAGGT	NA	False	NA	NA	False	NA	NA	NA	75446230	75451025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_75446373_75450563
tx.9780	chr5	-	3299	13	ISM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	32440	-12	31832	12	3prime_fragment	FALSE	canonical	3	1098	junction_8	90.9555370619196	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	6667	False	NA	NA	False	NA	NA	NA	122607848	122594390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412
tx.9781	chr5	-	781	8	ISM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	582	13282	-22	-13282	5prime_fragment	FALSE	canonical	3	1036	junction_5	36.9506013317173	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGGCATTTCAATGAC	7859	False	NA	NA	False	NA	NA	NA	122639706	122607684	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
tx.9782	chr5	-	2952	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	-4	2	-4	-2	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCTCTTTTTACTTCA	1239	False	NA	NA	False	NA	NA	NA	122752585	122688268	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
tx.9783	chr5	-	2864	18	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	14.5402436403627	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGTTCTCTTTTTAC	1219	False	NA	NA	False	NA	NA	NA	122752605	122688272	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122749005_122749171_122752500
tx.9784	chr5	+	1916	11	FSM	ENSMUSG00000029470.16	ENSMUST00000081554.13	1887	11	-29	0	11	0	multi-exon	FALSE	canonical	3	9	junction_5	30.411182153938	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	122845617	122867107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
tx.9785	chr5	+	1984	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	24	694	-1	0	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	122845630	122867107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
tx.9786	chr5	+	1828	11	NIC	ENSMUSG00000029470.16	novel	2702	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	28.3167794778997	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	122845638	122867107	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_122845851_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
tx.9787	chr5	-	2008	13	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	40	2732	23	-2732	5prime_fragment	FALSE	canonical	3	28	junction_4	15.8190725251374	7	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGGAATGTCACTCAGT	4673	False	NA	NA	False	NA	NA	NA	122917422	122881413	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
tx.9788	chr5	-	323	2	ISM	ENSMUSG00000029472.14	ENSMUST00000199130.2	687	4	5202	-193	5202	-1	3prime_fragment	FALSE	canonical	3	1940	junction_1	0	742	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGGTTTTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	122926390	122925784	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_122926082_122926364
tx.9789	chr5	+	1969	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	125	2346	16	-2346	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	119	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	639	False	NA	NA	False	NA	NA	NA	122988235	123007008	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
tx.979	chr10	-	2822	13	FSM	ENSMUSG00000006342.16	ENSMUST00000077610.6	2275	13	-42	-505	-14	0	multi-exon	FALSE	canonical	1	3	junction_12	20.894410470001	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTCCCGTCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	75479856	75472539	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75479707
tx.9790	chr5	-	3644	13	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-25	1	intron_retention	FALSE	canonical	3	58	junction_12	99.7441170640599	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGAGGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	123060195	123008726	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
tx.9791	chr5	+	1747	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	0	417	0	323	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTCTCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	123214337	123255395	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
tx.9792	chr5	+	1366	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	62	1169	-6	435	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	146	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTCAGTATATTC	NA	False	NA	NA	False	NA	NA	NA	123366314	123387025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
tx.9793	chr5	+	1263	5	NIC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	-6	435	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	81.8183964643649	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTCAGTATATTC	NA	False	NA	NA	False	NA	NA	NA	123366314	123387025	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_123366508_123377604_123377814_123379894_123379997_123384256_123384346_123386355
tx.9794	chr5	+	3792	6	FSM	ENSMUSG00000029438.10	ENSMUST00000031391.9	4718	6	16	910	16	0	multi-exon	FALSE	canonical	3	24	junction_2	4.53431361950185	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGGCTGAGCCCATT	NA	False	NA	NA	False	NA	NA	NA	123482526	123512145	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080
tx.9795	chr5	-	1354	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	29	193	-4	-193	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	312	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCAGGCTGTCCTGCAG	8951	False	NA	NA	False	NA	NA	NA	123662210	123649960	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
tx.9796	chr5	-	1043	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	-14	-348	-4	348	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAATAGCTTTAAGCATTT	8951	False	NA	NA	False	NA	NA	NA	123662210	123655300	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
tx.9797	chr5	-	2919	7	ISM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	14266	443	247	-443	3prime_fragment	TRUE	canonical	3	140	junction_1	15.6489261257407	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	6752	False	NA	NA	False	NA	NA	NA	123696835	123667164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676
tx.9798	chr5	-	2118	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	32	2085	-27	-2085	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTCTCAAGTCTTC	9999	False	NA	NA	False	NA	NA	NA	123711069	123668806	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
tx.9799	chr5	-	1248	8	NIC	ENSMUSG00000029434.13	novel	532	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	74.1113337885533	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGTGTGTTCCTATGTAA	9997	False	NA	NA	False	NA	NA	NA	123711071	123692827	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_123693074_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
tx.98	chr1	+	876	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	-12	185	-12	-185	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	708	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACTGAATTAACTTATGT	NA	False	NA	NA	False	NA	NA	NA	39406910	39410807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
tx.980	chr10	-	3196	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	-47	2	-30	0	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTCCCGTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	75479872	75472541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
tx.9800	chr5	-	1877	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	24	-306	-1	23	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	303	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTTTGGTTTGGGAG	4345	False	NA	NA	False	NA	NA	NA	123887453	123866763	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
tx.9801	chr5	-	2321	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	199.263561501216	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	4347	False	NA	NA	False	NA	NA	NA	123887451	123866488	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
tx.9802	chr5	+	1572	2	FSM	ENSMUSG00000029414.12	ENSMUST00000199838.2	347	2	7	-1232	-3	1232	multi-exon	FALSE	canonical	3	399	junction_1	0	26	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCCAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123887785	123893355	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_123887888_123891885
tx.9803	chr5	+	1002	7	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-20	459	combination_of_known_splicesites	FALSE	canonical	3	116	junction_2	529.179684879237	16	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTTTTTTTTTCTCTT	9052	False	NA	NA	False	NA	NA	NA	124045311	124065655	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_124045430_124046162_124046278_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
tx.9804	chr5	+	1184	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-20	463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	684.091353250307	21	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTCTCTTTTTT	9052	False	NA	NA	False	NA	NA	NA	124045311	124065659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_124045430_124046162_124046278_124046446_124046606_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
tx.9805	chr5	+	1017	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-12	463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	572.327630528762	656	1	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTCTCTTTTTT	9060	False	NA	NA	False	NA	NA	NA	124045319	124065659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_124045430_124046162_124046278_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
tx.9806	chr5	-	2355	3	ISM	ENSMUSG00000066278.7	ENSMUST00000199306.2	922	4	852	-1495	852	0	3prime_fragment	FALSE	canonical	3	154	junction_2	1.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	3911	False	NA	NA	False	NA	NA	NA	124148924	124142703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_124144802_124145671_124145755_124148750
tx.9807	chr5	-	2474	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	48	0	36	0	multi-exon	FALSE	canonical	3	122	junction_3	15.8394724940223	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	2284	False	NA	NA	False	NA	NA	NA	124170285	124142703	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
tx.9808	chr5	+	1588	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	5	3	5	-3	multi-exon	TRUE	canonical	3	59	junction_5	17.423642940939	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTTTGCTATTATT	NA	False	NA	NA	False	NA	NA	NA	124250364	124253543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
tx.9809	chr5	+	1438	6	FSM	ENSMUSG00000023707.14	ENSMUST00000198770.2	818	6	-105	-515	1	-1	multi-exon	FALSE	canonical	3	23	junction_4	30.8506077735918	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTTGCTATTATTTA	NA	False	NA	NA	False	NA	NA	NA	124250388	124253545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252450_124252709_124252777
tx.981	chr10	-	1658	10	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	-25	99167	0	4787	5prime_fragment	FALSE	canonical	3	63	junction_8	9.01986833004551	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGAAAGTGGATTTCCA	NA	False	NA	NA	False	NA	NA	NA	75600175	75581112	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
tx.9810	chr5	+	1024	6	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	229.659399981799	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	NA	False	NA	NA	NA	124254140	124256259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_124254308_124254496_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
tx.9811	chr5	+	1202	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	-10	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	46.874833333037	255	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	NA	False	NA	NA	NA	124254151	124256259	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
tx.9812	chr5	+	1558	3	NIC	ENSMUSG00000029404.16	novel	753	4	NA	NA	-8	1	intron_retention	FALSE	canonical	3	598	junction_2	13	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGTGTTGCATTTT	NA	False	NA	NA	False	NA	NA	NA	124254176	124256260	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_124255452_124255892_124255963_124256047
tx.9813	chr5	+	1619	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	58	0	58	0	multi-exon	FALSE	canonical	3	74	junction_1	7.5	78	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCGAGGAAGCTGTGG	5456	False	NA	NA	False	NA	NA	NA	124466218	124479907	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124466293_124476689_124476999_124478671
tx.9814	chr5	-	999	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	296	20	296	-20	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTACGATGTGGAA	4550	False	NA	NA	False	NA	NA	NA	124492438	124483499	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
tx.9815	chr5	-	2412	17	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-4	-8	combination_of_known_junctions	TRUE	canonical	3	243	junction_15	68.5428413019916	42	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGTATAGATCCAG	NA	False	NA	NA	False	NA	NA	NA	124563660	124531020	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
tx.9816	chr5	-	1390	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	-7	8	-7	-8	multi-exon	FALSE	canonical	3	23	junction_1	3.55902608401044	49	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAATACAACGCATGT	NA	False	NA	NA	False	NA	NA	NA	124616436	124601335	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
tx.9817	chr5	+	1106	2	FSM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	9	0	9	0	multi-exon	FALSE	canonical	3	127	junction_1	0	64	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGAGGTGGGGTTTGT	2229	False	NA	NA	False	NA	NA	NA	124621205	124629187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124621310_124628185
tx.9818	chr5	+	1093	2	FSM	ENSMUSG00000029402.9	ENSMUST00000111453.2	1181	2	105	-17	105	0	multi-exon	FALSE	canonical	3	28	junction_1	0	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGAGGTGGGGTTTGT	2649	False	NA	NA	False	NA	NA	NA	124621625	124629187	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124621717_124628185
tx.9819	chr5	-	1338	5	ISM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	15798	0	-850	0	3prime_fragment	FALSE	canonical	3	33	junction_4	4.32290411644765	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTCCTGTGTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	124653656	124631142	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580
tx.982	chr10	-	650	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	2	-3	2	0	multi-exon	FALSE	canonical	3	462	junction_2	12	241	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTCTTTGCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	75609246	75607063	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75607341_75608571_75608748_75609049
tx.9820	chr5	+	1965	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	106	3	106	-3	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTGTTTTATATTA	NA	False	NA	NA	False	NA	NA	NA	124678863	124688566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
tx.9821	chr5	+	2102	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	10	687	5	-687	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	56	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	NA	False	NA	NA	NA	124690936	124707036	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
tx.9822	chr5	-	1515	9	FSM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	58	440	2	-440	multi-exon	FALSE	canonical	0	0	junction_4	226.339761199839	335	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	NA	False	NA	NA	NA	124717136	124708715	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
tx.9823	chr5	+	1824	13	FSM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	9	839	7	254	multi-exon	FALSE	canonical	3	570	junction_1	79.1684210331928	93	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTTTCCTTAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	124717211	124734904	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
tx.9824	chr5	+	2420	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	35	280	0	-280	multi-exon	TRUE	canonical	3	31	junction_8	6.97499240366195	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAGTGTTAAGTGAACG	NA	False	NA	NA	False	NA	NA	NA	124736846	124765523	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
tx.9825	chr5	+	1389	7	ISM	ENSMUSG00000118662.2	ENSMUST00000239505.1	2913	17	20200	-4	20157	4	3prime_fragment	FALSE	canonical	3	40	junction_1	5.79271573232759	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTGGTGATGGTGATG	NA	False	NA	NA	False	NA	NA	NA	124757011	124765807	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
tx.9826	chr5	+	3040	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	3	2302	3	14	multi-exon	TRUE	canonical	3	142	junction_14	17.8821937464506	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATGAAGTTATTCCAT	NA	False	NA	NA	False	NA	NA	NA	124767119	124799217	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
tx.9827	chr5	+	4098	4	FSM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	206	junction_3	10.2089285540757	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATGTTTCCTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	124939748	124965694	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014
tx.9828	chr5	-	1086	4	ISM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	53605	-2	-789	0	3prime_fragment	FALSE	canonical	3	487	junction_1	96.6413760019773	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	NA	False	NA	NA	NA	125364530	125354150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422
tx.9829	chr5	-	2392	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	-23	-2	0	0	multi-exon	FALSE	canonical	3	487	junction_1	58.8981471316135	14	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	NA	False	NA	NA	NA	125418158	125354150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
tx.983	chr10	-	1847	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	27	6	14	-6	multi-exon	FALSE	canonical	3	19	junction_4	2.34520787991171	37	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAATGGTTTTGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	75617221	75609954	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
tx.9830	chr5	-	2508	13	FSM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	13	0	-10	0	multi-exon	TRUE	canonical	3	188	junction_1	171.680966232913	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	NA	False	NA	NA	NA	125418145	125354150	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
tx.9831	chr5	+	1145	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	58	5270	58	374	multi-exon	FALSE	canonical	3	373	junction_1	23.5	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGGGAACGCTTGA	NA	False	NA	NA	False	NA	NA	NA	125518689	125532164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_125518957_125528733_125528837_125531389
tx.9833	chr5	+	2906	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-121	628	-121	-628	multi-exon	TRUE	canonical	3	18	junction_6	12.1383212585269	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATCTATTTTTTAA	8580	False	NA	NA	False	NA	NA	NA	127709204	127785810	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
tx.9834	chr5	+	799	7	NNC	ENSMUSG00000049971.18	novel	1713	11	NA	NA	-61	-22131	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	12.7986544431653	4	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	8640	False	NA	NA	False	NA	NA	NA	127709264	127744804	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127744557
tx.9835	chr5	-	383	2	Antisense	novelGene_ENSMUSG00000049971.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTTATTTCTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	127760486	127733936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_127734238_127760404
tx.9836	chr5	-	360	2	Antisense	novelGene_ENSMUSG00000049971.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	2	0	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTCCTCCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	127760515	127748941	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Antisense_chr5_-_127749191_127760404
tx.9838	chr5	+	1080	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	140	1157	7	-1157	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	6417	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	482	False	NA	NA	False	NA	NA	NA	129097272	129100230	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
tx.9839	chr5	+	3194	12	ISM	ENSMUSG00000044017.17	ENSMUST00000056617.14	5163	26	65843	0	65836	0	3prime_fragment	FALSE	canonical	3	43	junction_2	8.40306909693916	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTCTTGAGCGTCACA	4620	False	NA	NA	False	NA	NA	NA	129239656	129281663	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
tx.984	chr10	-	998	5	FSM	ENSMUSG00000001663.11	ENSMUST00000001713.10	1037	5	39	0	39	0	multi-exon	FALSE	canonical	1	1	junction_4	2.87228132326901	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCCGTGTTGTTTCTTT	9615	False	NA	NA	False	NA	NA	NA	75634379	75619646	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75620068_75622628_75622806_75629910_75630062_75632876_75632965_75634218
tx.9840	chr5	+	867	4	NNC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	7	26	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	357.630473471649	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTGTGTCCAC	782	False	NA	NA	False	NA	NA	NA	129792588	129795570	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_129792614_129792747_129792859_129793790_129793931_129794979
tx.9841	chr5	+	1017	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119604.8	1208	4	-19	210	0	1	multi-exon	FALSE	canonical	3	22	junction_2	359.259732722101	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	754	False	NA	NA	False	NA	NA	NA	129792560	129795545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129792614_129792747_129793006_129793790_129793931_129794979
tx.9842	chr5	+	739	3	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	423.5	25	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	774	False	NA	NA	False	NA	NA	NA	129792580	129795545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_129792614_129793790_129793931_129794979
tx.9843	chr5	+	964	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	27	4070	6	6	multi-exon	FALSE	canonical	3	150	junction_2	308.575220435256	63	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCTTGATTTTTCAAAA	781	False	NA	NA	False	NA	NA	NA	129792587	129795550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129792614_129792747_129792975_129793790_129793931_129794979
tx.9844	chr5	+	816	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	22	-6	7	6	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	191	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCTTGATTTTTCAAAA	782	False	NA	NA	False	NA	NA	NA	129792588	129795550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
tx.9845	chr5	+	788	3	FSM	ENSMUSG00000034211.15	ENSMUST00000119985.2	859	3	105	-34	-15	1	multi-exon	FALSE	canonical	3	517	junction_1	192.5	70	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	939	False	NA	NA	False	NA	NA	NA	129792745	129795545	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129792828_129793790_129793931_129794979
tx.9846	chr5	+	2081	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	29	2	-7	-2	multi-exon	FALSE	canonical	3	290	junction_9	37.917389085507	239	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTGCACGATTGAGA	7796	False	NA	NA	False	NA	NA	NA	129802155	129835389	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
tx.9847	chr5	+	1247	7	ISM	ENSMUSG00000029432.13	ENSMUST00000124342.8	1600	11	-7	9625	-7	-6238	5prime_fragment	FALSE	canonical	3	307	junction_6	32.8515178069784	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTTGAGTTTACACTT	7796	False	NA	NA	False	NA	NA	NA	129802155	129825689	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065
tx.9848	chr5	-	1153	6	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8199	4	-37	-4	3prime_fragment	FALSE	canonical	3	674	junction_1	180.962537559573	841	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATTCAGTAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	129856314	129842625	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
tx.9849	chr5	+	2199	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	375	14	375	-14	multi-exon	TRUE	canonical	3	3618	junction_3	465.957308149311	2307	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTGGATCATTCACACT	NA	False	NA	NA	False	NA	NA	NA	129864436	129875198	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
tx.985	chr10	-	954	5	FSM	ENSMUSG00000033318.8	ENSMUST00000038257.7	1370	5	416	0	-2	0	multi-exon	FALSE	canonical	3	39	junction_1	6.29980158417708	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTTTTTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	75670299	75667678	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008
tx.9850	chr5	+	1636	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	10	618	10	0	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	199	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	129875836	129892273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
tx.9851	chr5	+	1464	8	NIC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	161.455749924471	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	129875851	129892273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_129875928_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
tx.9852	chr5	+	1512	8	ISM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	2948	618	-2577	0	3prime_fragment	FALSE	canonical	3	460	junction_5	11.8786380034214	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	129878774	129892273	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
tx.9853	chr5	-	2373	8	ISM	ENSMUSG00000025537.13	ENSMUST00000026617.13	2374	10	4967	0	-11	0	3prime_fragment	FALSE	canonical	3	15	junction_6	2.74791200881019	8	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTATTGACCTCATAAG	NA	False	NA	NA	False	NA	NA	NA	129902957	129892261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509
tx.9854	chr5	-	2158	9	ISM	ENSMUSG00000025537.13	ENSMUST00000026617.13	2374	10	4808	0	-170	0	3prime_fragment	FALSE	canonical	1	4	junction_8	5.62916512459885	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTATTGACCTCATAAG	NA	False	NA	NA	False	NA	NA	NA	129903116	129892261	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509_129902689_129903062
tx.9855	chr5	-	731	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	181	3	-16	0	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	5211	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTAGCGTCCTTAT	2245	False	NA	NA	False	NA	NA	NA	129916130	129909999	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
tx.9856	chr5	+	2462	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	30	0	-15	0	multi-exon	FALSE	canonical	3	34	junction_3	2120.04764097414	13	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	6035	False	NA	NA	False	NA	NA	NA	129924593	129932464	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
tx.9857	chr5	+	1133	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	118	1861	-21	306	multi-exon	FALSE	canonical	3	775	junction_1	60.5	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCACCCCTGCAGAACTT	NA	False	NA	NA	False	NA	NA	NA	129970928	130011726	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_129971207_130007359_130007470_130010981
tx.9858	chr5	-	1547	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	32	245	-4	1	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	129	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGCATATGCTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	130053190	130040343	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
tx.9859	chr5	+	1413	5	FSM	ENSMUSG00000025532.14	ENSMUST00000202163.4	931	5	-15	-467	-3	13	multi-exon	FALSE	canonical	3	60	junction_3	138.212472302611	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTATGTTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	130058127	130089643	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130077766_130077825_130088545
tx.986	chr10	-	572	3	FSM	ENSMUSG00000033307.8	ENSMUST00000038169.8	544	3	-30	2	-30	-2	multi-exon	FALSE	canonical	3	12818	junction_1	2119	5365	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTTGCCTCAGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	75696104	75695188	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75695378_75695520_75695694_75695894
tx.9860	chr5	+	1497	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	-2	-3	-2	3	multi-exon	FALSE	canonical	3	269	junction_4	51.2382669496149	43	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCACCATACCTGGTAT	NA	False	NA	NA	False	NA	NA	NA	130058128	130089633	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
tx.9861	chr5	+	2677	9	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	11	0	intron_retention	FALSE	canonical	3	67	junction_3	37.9637985454564	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTGGTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	130200649	130243178	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
tx.9862	chr5	-	1511	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	36	1	-2	-1	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	270	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTTGCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	130284335	130274572	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
tx.9863	chr5	+	2529	16	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	-23	-406	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	68.4530658350831	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	3489	False	NA	NA	False	NA	NA	NA	130284436	130369998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
tx.9864	chr5	+	2626	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	12	406	12	-406	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	4940	False	NA	NA	False	NA	NA	NA	130285887	130369998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
tx.9865	chr5	+	1351	7	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	30218	406	28323	-406	3prime_fragment	FALSE	canonical	3	235	junction_1	30.9125109516088	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	NA	False	NA	NA	False	NA	NA	NA	130316093	130369998	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
tx.9866	chr5	+	1575	12	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	502.73133320734	6	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	NA	False	NA	NA	NA	134611614	134627182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619491_134619620_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
tx.9867	chr5	+	1448	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	70	3477	3	0	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	283	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	NA	False	NA	NA	NA	134611613	134627182	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
tx.9868	chr5	-	1892	2	ISM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	17280	-1	17235	1	3prime_fragment	FALSE	canonical	3	2190	junction_1	0	23	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	6636	False	NA	NA	False	NA	NA	NA	134650921	134648729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_134650503_134650802
tx.9869	chr5	-	2354	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	14	-1	-8	1	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	173	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	2194	False	NA	NA	False	NA	NA	NA	134668187	134648729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
tx.987	chr10	+	1335	7	FSM	ENSMUSG00000009092.6	ENSMUST00000009236.6	1321	7	-3	-11	-3	11	multi-exon	FALSE	canonical	2	8	junction_5	4.01732359773132	10	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTAGTGAAACCTGGTG	NA	False	NA	NA	False	NA	NA	NA	75729243	75731786	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_75729352_75729452_75729519_75729603_75729678_75729800_75729895_75730265_75730462_75730872_75730964_75731080
tx.9870	chr5	-	2413	7	FSM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	158	155	-7	1	multi-exon	FALSE	canonical	3	761	junction_3	647.667803224256	93	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	2195	False	NA	NA	False	NA	NA	NA	134668186	134648729	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
tx.9871	chr5	-	1884	7	ISM	ENSMUSG00000029674.14	ENSMUST00000111233.8	3109	15	14011	12	-32	-12	3prime_fragment	FALSE	canonical	3	14	junction_3	2.08166599946613	1	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGGGCTTGCATCCTCGT	9973	False	NA	NA	False	NA	NA	NA	134693091	134684905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038
tx.9873	chr5	+	1399	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	6	1403	1	2	multi-exon	FALSE	canonical	3	37	junction_1	28.2460616723819	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3418	False	NA	NA	False	NA	NA	NA	134961227	134970088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
tx.9874	chr5	+	1960	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111218.8	1387	6	-7	-566	0	45	multi-exon	FALSE	canonical	3	11	junction_1	38.4988311510882	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGGGTGATCTGATTT	3429	False	NA	NA	False	NA	NA	NA	134961238	134970622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_134961303_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
tx.9875	chr5	+	2133	5	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	0	45	intron_retention	FALSE	canonical	3	98	junction_4	6.17960354715414	4	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGGGTGATCTGATTT	3429	False	NA	NA	False	NA	NA	NA	134961238	134970622	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
tx.9876	chr5	+	1281	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	192	0	-43	0	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	32	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	NA	False	NA	NA	NA	135038501	135041024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
tx.9877	chr5	+	1119	6	FSM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	369	5	-23	0	multi-exon	FALSE	canonical	3	445	junction_1	65.8634952003004	142	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	NA	False	NA	NA	NA	135038521	135041024	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
tx.9878	chr5	-	707	5	FSM	ENSMUSG00000005378.18	ENSMUST00000134180.8	465	5	134	-376	28	0	multi-exon	FALSE	canonical	3	942	junction_2	42.1218470630147	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCCTGGCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	135085739	135081810	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695
tx.9879	chr5	-	1295	12	ISM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	569	0	-7	0	3prime_fragment	FALSE	canonical	3	942	junction_2	58.9567708278386	99	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCCTGGCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	135092951	135081810	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
tx.988	chr10	-	1606	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	20	-4	-5	0	multi-exon	FALSE	canonical	3	799	junction_7	118.779206934547	516	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTGCAGTAGCATAAA	6884	False	NA	NA	False	NA	NA	NA	75757428	75732606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
tx.9880	chr5	+	1525	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	29	5934	0	5	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTCTCTCTGTTTCTC	9519	False	NA	NA	False	NA	NA	NA	135178539	135188680	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
tx.9881	chr5	+	574	3	FSM	ENSMUSG00000029681.13	ENSMUST00000111187.10	564	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	101	junction_2	118	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAAGTGTCTATTTTTG	8765	False	NA	NA	False	NA	NA	NA	135197232	135202302	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135197453_135199940_135200017_135202024
tx.9882	chr5	+	1651	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	97	10	-9	-10	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	40	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTAGTACTTGACAGCT	8766	False	NA	NA	False	NA	NA	NA	135197233	135210699	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
tx.9883	chr5	-	1438	9	FSM	ENSMUSG00000040013.12	ENSMUST00000044972.11	1447	9	9	0	8	0	multi-exon	FALSE	canonical	3	793	junction_1	94.8445273856114	213	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	NA	False	NA	NA	NA	135378889	135320557	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
tx.9884	chr5	-	1276	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	8	3	8	-3	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	103	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAAGTCATTAGTGTG	NA	False	NA	NA	False	NA	NA	NA	135378889	135366222	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
tx.9885	chr5	+	1992	7	NNC	ENSMUSG00000053388.11	novel	1456	6	NA	NA	-1409	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	2.86744175568088	3	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCCTGTGCTTCCCAAC	NA	False	NA	NA	False	NA	NA	NA	135380739	135396856	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392903_135392927_135395394_135395520_135395927
tx.9886	chr5	+	1585	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	3	655	3	0	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	104	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCACAGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	135398809	135404997	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
tx.9888	chr5	+	1905	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	74	2228	-12	-379	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	49	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGTGGCATACTGTG	NA	False	NA	NA	False	NA	NA	NA	135661545	135673002	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
tx.9889	chr5	+	2011	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	50	2302	0	-381	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGTGGCATACTG	NA	False	NA	NA	False	NA	NA	NA	135661557	135673000	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
tx.989	chr10	-	1639	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	17	4	-11	0	multi-exon	FALSE	canonical	3	255	junction_7	283.203990084886	190	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTGCAGTAGCATAAA	6878	False	NA	NA	False	NA	NA	NA	75757434	75732606	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
tx.9890	chr5	+	2503	16	FSM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	133	0	11	0	multi-exon	FALSE	canonical	3	231	junction_9	23.2776478384069	76	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	2034	False	NA	NA	False	NA	NA	NA	135718022	135764180	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
tx.9891	chr5	-	1376	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	183	0	-57	0	multi-exon	FALSE	canonical	3	674	junction_10	35.0345756018723	103	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	5246	False	NA	NA	False	NA	NA	NA	135773119	135764338	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
tx.9892	chr5	+	1300	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	156	0	0	0	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	865	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTAGATTTCCTTT	609	False	NA	NA	False	NA	NA	NA	135807489	135819245	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
tx.9893	chr5	+	818	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	83	2	-16	0	multi-exon	FALSE	canonical	3	2181	junction_2	11	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGACTCCAGAGTTAT	NA	False	NA	NA	False	NA	NA	NA	135916855	135918415	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_135917289_135917902_135917967_135918094
tx.9894	chr5	-	3533	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	-13	0	4	0	multi-exon	FALSE	canonical	3	925	junction_1	0	8	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	135963466	135937262	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_135940506_135963176
tx.9895	chr5	-	550	2	FSM	ENSMUSG00000051391.10	ENSMUST00000126192.2	417	2	-47	-86	0	5	multi-exon	FALSE	canonical	3	6	junction_1	0	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCATGTCTGATGCTTC	NA	False	NA	NA	False	NA	NA	NA	135963451	135959528	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_135959804_135963176
tx.9896	chr5	+	1320	8	FSM	ENSMUSG00000004948.13	ENSMUST00000005073.13	1323	8	3	0	3	0	multi-exon	TRUE	canonical	3	12	junction_4	3.97953950776689	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGTGGTTTAATG	NA	False	NA	NA	False	NA	NA	NA	136008955	136017478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136009297_136011492_136011612_136013015_136013120_136013201_136013386_136014398_136014517_136016108_136016201_136016325_136016463_136017253
tx.9897	chr5	+	2607	11	FSM	ENSMUSG00000004947.16	ENSMUST00000111142.9	2650	11	38	5	-6	1	multi-exon	TRUE	canonical	3	47	junction_6	35.5758344947803	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATCTGTTGGGAAGTTT	8497	False	NA	NA	False	NA	NA	NA	136023691	136061721	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
tx.9898	chr5	+	2497	10	FSM	ENSMUSG00000004947.16	ENSMUST00000111145.10	2493	10	0	-4	0	2	multi-exon	TRUE	canonical	3	84	junction_5	18.5279235376575	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTGTTGGGAAGTTTT	8470	False	NA	NA	False	NA	NA	NA	136023664	136061722	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
tx.9899	chr5	+	578	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	68	0	-3	0	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	207	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9280	False	NA	NA	False	NA	NA	NA	136145552	136151801	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
tx.99	chr1	+	490	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	-1	-2	-1	0	multi-exon	FALSE	canonical	3	1086	junction_1	4596.75456164455	556	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	39407008	39410447	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
tx.990	chr10	-	2261	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	27	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5083	False	NA	NA	False	NA	NA	NA	75768309	75759055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
tx.9900	chr5	-	2154	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	25	294	13	1	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	101	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTGGGAAATGAGTGT	6709	False	NA	NA	False	NA	NA	NA	136164903	136151919	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
tx.9901	chr5	+	1693	3	NNC	ENSMUSG00000039754.11	novel	557	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	29.5	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCTCCTTTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	136164999	136170469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_136165149_136168282_136168390_136169032
tx.9902	chr5	+	1661	3	FSM	ENSMUSG00000039754.11	ENSMUST00000136634.8	557	3	0	-1104	0	1	multi-exon	FALSE	canonical	3	9	junction_1	26.5	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCTCCTTTTCCCATC	NA	False	NA	NA	False	NA	NA	NA	136164999	136170470	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136165149_136168315_136168390_136169032
tx.9903	chr5	+	1776	3	FSM	ENSMUSG00000039754.11	ENSMUST00000041100.4	1773	3	0	-3	0	0	multi-exon	FALSE	canonical	3	62	junction_2	0.5	17	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCTCCTTTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	136165007	136170469	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136165149_136168191_136168390_136169032
tx.9904	chr5	-	917	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	20	2956	20	1	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	194	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGTCCACACGTGCGA	NA	False	NA	NA	False	NA	NA	NA	136227797	136209936	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
tx.9905	chr5	-	2880	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	-49	0	-35	0	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	136596167	136276988	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
tx.9908	chr5	+	905	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	6	2160	6	63	multi-exon	FALSE	canonical	3	57	junction_4	11.0989864402116	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTAGCACTGTGTTTTC	4061	False	NA	NA	False	NA	NA	NA	136937009	136942098	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
tx.9909	chr5	+	634	4	FSM	ENSMUSG00000097908.8	ENSMUST00000197095.5	617	4	-10	-7	-10	7	multi-exon	FALSE	canonical	3	66	junction_3	17.326921891156	9	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTATGGTCTACTTATA	NA	False	NA	NA	False	NA	NA	NA	136948195	136962546	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962315
tx.991	chr10	-	1793	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	51.1639521538358	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5083	False	NA	NA	False	NA	NA	NA	75768309	75759055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
tx.9910	chr5	+	949	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	1	-2	1	0	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	124	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	4052	False	NA	NA	False	NA	NA	NA	136982129	136995088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
tx.9911	chr5	+	816	4	FSM	ENSMUSG00000019054.14	ENSMUST00000111097.8	601	4	-130	-85	1	0	multi-exon	FALSE	canonical	3	58	junction_1	234.963827003222	52	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	4052	False	NA	NA	False	NA	NA	NA	136982129	136995088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136982445_136993946_136994024_136994418_136994525_136994770
tx.9912	chr5	+	775	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	11	0	11	0	multi-exon	FALSE	canonical	3	370	junction_1	76.6823806359714	78	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	3279	False	NA	NA	False	NA	NA	NA	136990941	136995088	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
tx.9913	chr5	-	695	5	FSM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	41	4	-31	0	multi-exon	FALSE	canonical	3	69	junction_4	104.169033306449	28	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	NA	False	NA	NA	NA	137015714	137011047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137015664
tx.9914	chr5	-	867	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	311	30	-167	0	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	27	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	NA	False	NA	NA	NA	137016564	137011047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
tx.9915	chr5	-	1057	4	FSM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	-257	-102	221	0	multi-exon	FALSE	canonical	0	0	junction_3	144.270579121316	1	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	NA	False	NA	NA	NA	137016654	137011047	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137011542_137011721_137011802_137013732_137013904_137016342
tx.9916	chr5	+	2699	20	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-82	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.4805015681799	2	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAGTCCGTGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	137016149	137025393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_137016264_137016458_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
tx.9917	chr5	+	2901	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	277	102	-82	-102	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCGTGAGTCCAATATAAA	NA	False	NA	NA	False	NA	NA	NA	137016149	137025400	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
tx.9918	chr5	+	804	4	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	6198	109	1593	-109	3prime_fragment	FALSE	canonical	3	178	junction_3	5.09901951359278	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAGTCCGTGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	137022070	137025393	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_137022168_137022996_137023144_137023786_137023913_137024959
tx.9919	chr5	+	688	2	NNC	ENSMUSG00000087244.2	novel	944	6	NA	NA	1291	258	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	2	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTGTGTTTTT	2204	False	NA	NA	False	NA	NA	NA	137027530	137028406	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_137027818_137028005
tx.992	chr10	+	648	4	FSM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	313	-22	313	0	multi-exon	FALSE	canonical	3	15821	junction_1	833.259196702256	1009	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7259	False	NA	NA	False	NA	NA	NA	75771719	75773581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_+_75771839_75772071_75772280_75773140_75773289_75773408
tx.9920	chr5	-	1283	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	65	5	-28	-5	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	272	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTTTGCCTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	137074924	137063851	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
tx.9921	chr5	-	802	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	79	0	-14	0	multi-exon	FALSE	canonical	3	320	junction_1	0	86	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1718	False	NA	NA	False	NA	NA	NA	137500701	137499700	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137500342_137500540
tx.9922	chr5	-	1548	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	310	2	4	-1	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTCTCCTTGCTTAC	1842	False	NA	NA	False	NA	NA	NA	137531462	137526390	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
tx.9923	chr5	-	1150	7	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	2615	-3	-569	0	3prime_fragment	FALSE	canonical	3	52	junction_6	194.602729226037	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	6749	False	NA	NA	False	NA	NA	NA	137607023	137603366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606878
tx.9924	chr5	-	1547	8	ISM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	808	2	23	0	3prime_fragment	FALSE	canonical	3	423	junction_6	64.4265124789793	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	-3	True	NA	NA	False	NA	NA	NA	137608941	137603366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658
tx.9925	chr5	-	1560	9	FSM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	64	2	-15	0	multi-exon	FALSE	canonical	3	231	junction_8	116.165560731225	18	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	4087	False	NA	NA	False	NA	NA	NA	137609685	137603366	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498
tx.9926	chr5	+	3044	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	34	0	3	0	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	11	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGGTGTGTGCCTGCC	2218	False	NA	NA	False	NA	NA	NA	137627416	137639356	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
tx.9927	chr5	+	1088	6	FSM	ENSMUSG00000079165.11	ENSMUST00000177466.8	1005	6	-49	-34	-49	0	multi-exon	FALSE	canonical	3	122	junction_1	39.5858560599616	31	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTGCAGTGGGACAT	1052	False	NA	NA	False	NA	NA	NA	137639546	137641164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_137639819_137639983_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
tx.9929	chr5	+	1241	5	FSM	ENSMUSG00000079165.11	ENSMUST00000166099.3	1101	5	-140	0	-37	0	multi-exon	FALSE	canonical	3	204	junction_4	13.4976849866931	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTGCAGTGGGACAT	1064	False	NA	NA	False	NA	NA	NA	137639558	137641164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
tx.993	chr10	+	653	3	ISM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	541	-22	541	0	3prime_fragment	FALSE	canonical	3	16591	junction_2	626	80	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7487	False	NA	NA	False	NA	NA	NA	75771947	75773581	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_75772280_75773140_75773289_75773408
tx.9930	chr5	+	481	2	FSM	ENSMUSG00000079165.11	ENSMUST00000176075.2	576	2	160	-65	-11	0	multi-exon	FALSE	canonical	3	204	junction_1	0	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTGCAGTGGGACAT	2105	False	NA	NA	False	NA	NA	NA	137640599	137641164	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_137640701_137640784
tx.9931	chr5	-	2932	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	-52	-22	-6	0	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1758	False	NA	NA	False	NA	NA	NA	137682994	137648724	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
tx.9932	chr5	-	2505	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	9	379	9	17	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACGATAAAAAGTAAAA	1773	False	NA	NA	False	NA	NA	NA	137682979	137649103	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
tx.9933	chr5	+	2328	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	-4	1659	-4	201	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	57	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGAGGTTGGTGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	137744253	137758011	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
tx.9934	chr5	+	943	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	13	0	13	0	multi-exon	FALSE	canonical	3	301	junction_1	53.8970211504206	65	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	NA	False	NA	NA	NA	137777178	137778372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
tx.9935	chr5	+	1032	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	15	0	15	0	intron_retention	FALSE	canonical	3	301	junction_1	64	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	NA	False	NA	NA	NA	137777180	137778372	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_137777484_137777563_137777808_137777887
tx.9936	chr5	-	1475	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	1653	0	1653	0	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCAGCACTTTCTA	4379	False	NA	NA	False	NA	NA	NA	137783272	137780167	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
tx.9937	chr5	+	2223	17	FSM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	-7	6	-7	-6	multi-exon	FALSE	canonical	3	53	junction_4	16.2498798072478	21	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTGTGCTTTGTGT	7070	False	NA	NA	False	NA	NA	NA	137786052	137820877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
tx.9938	chr5	+	2127	16	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	4	-7	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	25.4046364972136	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTGTGCTTTGTG	7081	False	NA	NA	False	NA	NA	NA	137786063	137820876	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
tx.9939	chr5	+	2164	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	-9	49	-9	0	multi-exon	FALSE	canonical	3	48	junction_1	50.6776303927307	24	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGTCTCAGGACTGTTAT	NA	False	NA	NA	False	NA	NA	NA	138115189	138132478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300
tx.994	chr10	-	1438	4	NIC	ENSMUSG00000050157.7	novel	1221	7	NA	NA	-109	-557	intron_retention	FALSE	canonical	3	20	junction_2	7.58653778449403	11	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	4807	False	NA	NA	False	NA	NA	NA	75776615	75774566	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_-_75775673_75775764_75775852_75776227_75776255_75776397
tx.9940	chr5	+	2236	5	FSM	ENSMUSG00000037017.16	ENSMUST00000062350.15	2252	5	18	-2	5	1	multi-exon	FALSE	canonical	3	41	junction_1	46.7566840141599	12	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCGTCTCAGGACTGTTA	NA	False	NA	NA	False	NA	NA	NA	138115182	138132477	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138115251_138116097_138116183_138123239_138123953_138124715_138124909_138131300
tx.9941	chr5	+	2246	5	FSM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	13	51	-8	0	multi-exon	FALSE	canonical	3	61	junction_1	38.7774096607806	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	NA	False	NA	NA	False	NA	NA	NA	138115190	138132476	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138124909_138131300
tx.9942	chr5	+	2146	4	FSM	ENSMUSG00000037017.16	ENSMUST00000080732.10	2134	4	-10	-2	-10	0	multi-exon	FALSE	canonical	3	30	junction_1	59.1626759217517	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGTCTCAGGACTGTTAT	NA	False	NA	NA	False	NA	NA	NA	138115188	138132478	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138115251_138123239_138123953_138124715_138124909_138131300
tx.9943	chr5	+	1105	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	20	662	-9	6	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	1786	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTCCAGTGGCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	138159352	138162246	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
tx.9944	chr5	-	1646	10	ISM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	3539	4	760	-4	3prime_fragment	FALSE	canonical	3	1920	junction_7	148.02185357508	94	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTGTAGAGTTTTTAG	5255	False	NA	NA	False	NA	NA	NA	138167145	138162848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071
tx.9945	chr5	-	2397	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	561	4	-43	-4	multi-exon	FALSE	canonical	3	1644	junction_12	192.903605514278	644	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTGTAGAGTTTTTAG	2277	False	NA	NA	False	NA	NA	NA	138170123	138162848	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
tx.9946	chr5	+	1720	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	38	1721	-7	21	multi-exon	TRUE	canonical	3	48	junction_6	9.89356624586021	22	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTGTTTGAGTGTGTAG	8115	False	NA	NA	False	NA	NA	NA	138170301	138176970	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
tx.9947	chr5	-	2406	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_14	167.30713843536	9	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1957	False	NA	NA	False	NA	NA	NA	138185483	138176878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
tx.9948	chr5	-	2388	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_14	144.727259325383	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1954	False	NA	NA	False	NA	NA	NA	138185486	138176878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
tx.9949	chr5	-	2302	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	2	0	2	0	multi-exon	FALSE	canonical	3	362	junction_14	100.146932869985	45	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1954	False	NA	NA	False	NA	NA	NA	138185486	138176878	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
tx.995	chr10	-	2041	11	FSM	ENSMUSG00000020230.16	ENSMUST00000099571.10	2052	11	7	4	-1	1	multi-exon	FALSE	canonical	2	4	junction_10	3.8262252939418	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTGTTCTGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	76073692	76043059	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072659_76073583
tx.9950	chr5	+	1557	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	23	275	23	-275	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	31	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTGAGTCCCATTTCAA	5621	False	NA	NA	False	NA	NA	NA	138185769	138191905	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
tx.9951	chr5	+	604	4	FSM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	269	4	-80	-4	multi-exon	FALSE	canonical	3	258	junction_1	67.9084350839832	166	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGATGTGTGCACAGAA	NA	False	NA	NA	False	NA	NA	NA	138254012	138257653	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138254066_138254514_138254596_138256916_138257035_138257301
tx.9952	chr5	+	859	3	FSM	ENSMUSG00000050552.9	ENSMUST00000160157.2	980	3	118	3	118	0	multi-exon	FALSE	canonical	3	386	junction_1	14	30	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTGTGCACAGAATGGT	NA	False	NA	NA	False	NA	NA	NA	138254210	138257657	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138254596_138256916_138257035_138257301
tx.9953	chr5	-	2589	10	FSM	ENSMUSG00000029510.16	ENSMUST00000161827.8	2586	10	-5	2	-5	0	multi-exon	FALSE	canonical	3	16	junction_6	3.67507453523138	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1716	False	NA	NA	False	NA	NA	NA	138278272	138271918	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
tx.9954	chr5	+	3286	5	FSM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	0	2026	0	-2026	multi-exon	FALSE	canonical	3	42	junction_4	9.52299847737046	8	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGACGGCTCTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	138439729	138456930	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454136
tx.9955	chr5	-	2265	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	24	2460	1	4	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGTTTGTTTATCAA	1755	False	NA	NA	False	NA	NA	NA	138617999	138604373	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
tx.9956	chr5	-	2165	5	FSM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	21	1132	1	0	multi-exon	FALSE	canonical	3	23	junction_3	27.3530162870569	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATCTTTGTTTGTTTA	1755	False	NA	NA	False	NA	NA	NA	138617999	138604377	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
tx.9957	chr5	-	1737	6	NIC	ENSMUSG00000025856.16	novel	1287	7	NA	NA	-19	135	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	151.854667363239	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATGCGCCTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	138981861	138962135	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138981488
tx.9958	chr5	-	1642	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	42	376	-42	126	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	87	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATTATTTCTGATGCG	NA	False	NA	NA	False	NA	NA	NA	138980750	138962144	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
tx.9959	chr5	+	1493	13	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	0	15026	0	271	5prime_fragment	FALSE	canonical	3	426	junction_7	211.809203975863	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGCCCACCTCCAAAGGT	NA	False	NA	NA	False	NA	NA	NA	139186391	139220569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441
tx.996	chr10	-	347	2	ISM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	271	8543	20	-745	5prime_fragment	FALSE	canonical	3	38	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCTTCTCGTACAGCT	NA	False	NA	NA	False	NA	NA	NA	76304677	76303943	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_-_76304221_76304607
tx.9960	chr5	+	1101	10	ISM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	17	14981	0	271	5prime_fragment	FALSE	canonical	3	84	junction_6	283.877125218328	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGCCCACCTCCAAAGGT	NA	False	NA	NA	False	NA	NA	NA	139186414	139220569	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441
tx.9961	chr5	+	3749	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	225.20792614826	3	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	NA	False	NA	NA	NA	139186421	139235543	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.9962	chr5	+	1796	5	ISM	ENSMUSG00000036817.15	ENSMUST00000110882.8	2454	19	29960	-1152	633	0	3prime_fragment	FALSE	canonical	3	873	junction_4	41.2492424172857	10	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	9985	False	NA	NA	False	NA	NA	NA	139227741	139235550	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
tx.9963	chr5	+	1239	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	146	722	100	0	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	139238224	139255084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
tx.9964	chr5	+	1965	9	FSM	ENSMUSG00000025858.13	ENSMUST00000110878.2	1180	9	-785	0	356	0	multi-exon	FALSE	canonical	2	3	junction_1	399.478546826985	7	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	139238480	139255084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_139239357_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
tx.9965	chr5	+	610	4	ISM	ENSMUSG00000025858.13	ENSMUST00000110878.2	1180	9	13522	0	102	0	3prime_fragment	FALSE	canonical	3	1098	junction_3	53.2812245438193	11	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	33	False	NA	NA	False	NA	NA	NA	139252787	139255084	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_139252900_139252981_139253058_139253157_139253231_139254735
tx.9966	chr5	-	791	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	39	1631	-17	2	multi-exon	FALSE	canonical	3	183	junction_2	1.5	59	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTGGCTTTTGACAT	NA	False	NA	NA	False	NA	NA	NA	139330949	139323574	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_139324131_139328317_139328430_139330826
tx.9967	chr5	-	1462	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	-35	2	-10	-2	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	322	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGACTTTTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	139446292	139345495	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
tx.9968	chr5	+	168	2	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	103	junction_1	0	3	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAATAAGTAAATA	NA	False	NA	NA	False	NA	NA	NA	139470808	139497764	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	Intergenic_chr5_+_139470860_139497647
tx.9969	chr5	-	780	3	FSM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	-42	-5	0	5	multi-exon	FALSE	canonical	3	69	junction_2	75.5	51	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTTCTCAGTGATCCT	7313	False	NA	NA	False	NA	NA	NA	139812640	139809362	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_139809829_139811882_139812120_139812563
tx.997	chr10	+	1751	8	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	35254	-2	-107	2	3prime_fragment	FALSE	canonical	3	231	junction_5	29.6014340524101	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTAGTTTTATGAAT	NA	False	NA	NA	False	NA	NA	NA	76340014	76351693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
tx.9970	chr5	-	861	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	4	18	4	3	multi-exon	FALSE	canonical	3	166	junction_2	27	85	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCCTTCTCAGTGATC	7317	False	NA	NA	False	NA	NA	NA	139812636	139809364	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_139809829_139811882_139812120_139812476
tx.9971	chr5	-	2650	18	FSM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	-16	6	-16	-1	multi-exon	FALSE	canonical	3	167	junction_17	17.902078903461	23	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGATTGTGTCCAAGGCT	NA	False	NA	NA	False	NA	NA	NA	140307323	139994449	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
tx.9972	chr5	-	1413	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	15	15	15	-15	multi-exon	FALSE	canonical	3	45	junction_2	12	63	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTTTCTGGCTTTTG	3916	False	NA	NA	False	NA	NA	NA	140317638	140313443	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_140314536_140316734_140317025_140317607
tx.9973	chr5	+	894	4	FSM	ENSMUSG00000036639.13	ENSMUST00000071881.10	952	4	58	0	9	0	multi-exon	FALSE	canonical	3	19	junction_1	90.7450641449256	48	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	NA	False	NA	NA	NA	140317672	140323892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_140317711_140320209_140320375_140321067_140321214_140323347
tx.9974	chr5	+	937	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	17	0	17	0	multi-exon	FALSE	canonical	3	93	junction_1	49.2461927462418	88	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	NA	False	NA	NA	NA	140317680	140323892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
tx.9975	chr5	+	963	5	NNC	ENSMUSG00000036639.13	novel	954	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	84.8071341338687	15	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	NA	False	NA	NA	NA	140317682	140323892	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_+_140317711_140318149_140318229_140320209_140320375_140321067_140321214_140323347
tx.9976	chr5	-	2610	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	19	-2	-2	0	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	18	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	7739	False	NA	NA	False	NA	NA	NA	140374998	140326055	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
tx.9977	chr5	+	2971	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	-23	-3	-23	3	multi-exon	TRUE	canonical	3	2428	junction_3	310.145868707844	19	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCCTGATCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	140405059	140429118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
tx.9978	chr5	+	1530	10	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	13611	-3	5849	3	3prime_fragment	FALSE	canonical	3	2626	junction_7	341.258129736291	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCCTGATCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	140418693	140429118	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
tx.9979	chr5	+	606	2	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	22990	0	2376	0	3prime_fragment	FALSE	canonical	3	3947	junction_1	0	5	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	8647	False	NA	NA	False	NA	NA	NA	140428072	140429115	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_140428192_140428628
tx.998	chr10	+	627	3	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	42099	-2	132	2	3prime_fragment	FALSE	canonical	3	292	junction_1	14	4	0	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTAGTTTTATGAAT	1410	False	NA	NA	False	NA	NA	NA	76346859	76351693	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr10_+_76347058_76348251_76348403_76351415
tx.9980	chr5	+	1789	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	56	486	31	-486	multi-exon	FALSE	canonical	3	68	junction_1	0	14	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCATTCCTGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	140491360	140510993	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_140491452_140509295
tx.9981	chr5	-	2489	21	ISM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	73	8247	-5	-3916	5prime_fragment	FALSE	canonical	3	15	junction_8	7.13161973187017	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCCTAGTATGTGTGAG	4484	False	NA	NA	False	NA	NA	NA	140688060	140655828	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
tx.9982	chr5	+	1430	2	ISM	ENSMUSG00000050022.17	ENSMUST00000176035.2	2402	4	-8	8129	-8	0	5prime_fragment	FALSE	canonical	3	12	junction_1	0	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGTGTCATGTATTGT	NA	False	NA	NA	False	NA	NA	NA	140735029	140739065	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_+_140735087_140737692
tx.9983	chr5	-	510	2	ISM	ENSMUSG00000000149.11	ENSMUST00000198447.2	1306	3	81	24993	81	-24993	5prime_fragment	FALSE	canonical	3	266	junction_1	0	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGCTGTCTCATTGGT	NA	False	NA	NA	False	NA	NA	NA	140815831	140770940	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_140771368_140815748
tx.9984	chr5	-	1374	6	FSM	ENSMUSG00000036526.9	ENSMUST00000196169.2	1299	6	-63	-12	-63	10	multi-exon	FALSE	canonical	2	4	junction_5	3.77359245282264	5	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACAGTCTCACTAGCAG	NA	False	NA	NA	False	NA	NA	NA	140868023	140858734	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_140859285_140860095_140860212_140862151_140862277_140863717_140863898_140866052_140866189_140867756
tx.9985	chr5	+	2795	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-11	905	-1	3	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	4	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8689	False	NA	NA	False	NA	NA	NA	142449797	142463560	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
tx.9986	chr5	-	2000	4	NNC	ENSMUSG00000039477.17	novel	9342	25	NA	NA	8199	56	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	12.0277457017791	2	0	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTCTTTGGAGTGACTT	NA	False	NA	NA	False	NA	NA	NA	142714237	142710359	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_142711943_142712732_142712808_142713595_142713833_142714132
tx.9987	chr5	-	2833	5	FSM	ENSMUSG00000066640.12	ENSMUST00000035985.8	2831	5	0	-2	0	2	multi-exon	FALSE	canonical	3	17	junction_3	6.28490254498827	7	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTCCAGGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	142880993	142857541	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_142858276_142864412_142864632_142871293_142872838_142874423_142874631_142880864
tx.9988	chr5	-	1883	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	29	8	0	-8	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	5327	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAACAGCTTGTGGCTCT	8918	False	NA	NA	False	NA	NA	NA	142892480	142888877	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
tx.9989	chr5	+	2660	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	13	2	13	0	multi-exon	FALSE	canonical	3	2634	junction_2	132.012310032057	126	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	NA	False	NA	NA	NA	142946110	142958938	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
tx.999	chr10	+	630	6	NIC	ENSMUSG00000033105.13	novel	3969	16	NA	NA	5	1878	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	92.058676940308	22	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGTATGCATTATGAAA	NA	False	NA	NA	False	NA	NA	NA	76367450	76373435	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76373402
tx.9990	chr5	-	526	3	FSM	ENSMUSG00000104529.5	ENSMUST00000198334.2	520	3	-6	0	-6	0	multi-exon	FALSE	canonical	3	32	junction_2	7.5	13	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCGCCTCCTATTC	3471	False	NA	NA	False	NA	NA	NA	143151512	143150533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_143150848_143151184_143151305_143151420
tx.9991	chr5	-	684	2	FSM	ENSMUSG00000104529.5	ENSMUST00000200314.5	588	2	-96	0	-48	0	multi-exon	FALSE	canonical	3	47	junction_1	0	2	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCGCCTCCTATTC	3429	False	NA	NA	False	NA	NA	NA	143151554	143150533	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_143150848_143151184
tx.9992	chr5	-	542	3	NNC	ENSMUSG00000104529.5	novel	520	3	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.5	16	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGTGTCGCCTCCTAT	3461	False	NA	NA	False	NA	NA	NA	143151522	143150535	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_143150848_143151184_143151305_143151412
tx.9993	chr5	-	610	3	NNC	ENSMUSG00000104529.5	novel	520	3	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	6	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGTGTCGCCTCCTA	3471	False	NA	NA	False	NA	NA	NA	143151512	143150536	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_143150848_143151105_143151305_143151412
tx.9994	chr5	-	1929	6	FSM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	279	0	-17	0	multi-exon	FALSE	canonical	3	130	junction_3	6.98569967862919	2	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCATTGTGGGGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	143300836	143286961	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300657
tx.9995	chr5	-	1395	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_7	84.1580146425249	20	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5305	False	NA	NA	False	NA	NA	NA	143314975	143302243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314853
tx.9996	chr5	-	1274	8	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	87.5293536769354	15	0	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5303	False	NA	NA	False	NA	NA	NA	143314977	143302243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	NNC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314201_143314326_143314920
tx.9997	chr5	-	1334	8	FSM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	30	0	2	0	multi-exon	FALSE	canonical	3	167	junction_7	40.248209492435	117	0	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5299	False	NA	NA	False	NA	NA	NA	143314981	143302243	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
tx.9998	chr5	+	1844	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-12	-3	-12	3	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	236	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGTCTTTTCTATGAA	NA	False	NA	NA	False	NA	NA	NA	143389580	143407659	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
tx.9999	chr5	-	1731	2	ISM	ENSMUSG00000001847.15	ENSMUST00000145709.8	585	6	10750	-1579	10176	1	3prime_fragment	FALSE	canonical	3	1302	junction_1	0	6	0	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGTTATGCTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	143493187	143491235	ES_CapTrap_PacBio	iso_detect_de_novo_Bambu_CapTrap_PacBio	ISM_chr5_-_143492861_143493081
