Introduction

- This report shows gene isoform quantification evaluation
- Interpretation of the evaluation at [LINK]

Gene features

Distribution of K values

Download PDF Download PNG

Distribution of isoform lengths

Download PDF Download PNG

Distribution of numbers of exons

Download PDF Download PNG

Distribution of numbers of isoforms

Download PDF Download PNG

Estimation error

Normalized Root Mean Square Error Median Relative Difference Mean Abundance Recovery Rate Spearman's rho
0.145 0.846 111.2% 0.554

Histogram of Abundance Recovery Rate

Download PDF Download PNG

Correlation of estimated abundance and ground truth

Download PDF Download PNG

Correlation Boxplot of estimated abundance and ground truth

Download PDF Download PNG

Resolution Entropy

Resolution Entropy
1.714709e-03

Resolution Entropy

Download PDF Download PNG

Split Statistics

Statistics with different K values

Download PDF Download PNG

Statistics with different isoform lengths

Download PDF Download PNG

Statistics with different numbers of exons

Download PDF Download PNG

Statistics with different numbers of isoforms

Download PDF Download PNG

Statistics with different expression level

Download PDF Download PNG