isoform	chrom	strand	junction_number	genomic_start_coord	genomic_end_coord	transcript_coord	junction_category	start_site_category	end_site_category	diff_to_Ref_start_site	diff_to_Ref_end_site	bite_junction	splice_site	canonical	RTS_junction	indel_near_junct	phyloP_start	phyloP_end	sample_with_cov	total_coverage	es_rep3SJ.out	es_rep1SJ.out	es_rep2SJ.out
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000031	chr1	-	junction_1	10012375	10012547	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	144	54	48	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000031	chr1	-	junction_2	10012617	10012834	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	688	247	229	212
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000031	chr1	-	junction_3	10012943	10014244	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	370	132	128	110
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_1	13636621	13639694	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1356	465	440	451
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_2	13639856	13640162	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1272	410	438	424
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_3	13640307	13642026	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1372	464	447	461
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_4	13642132	13642227	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1264	410	424	430
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_5	13642299	13646591	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1226	431	396	399
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_6	13646677	13648323	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1308	454	448	406
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_7	13648383	13649673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1315	440	424	451
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_8	13649791	13649913	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1418	480	477	461
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_9	13650036	13651246	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1353	454	462	437
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	junction_10	13651311	13659823	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1426	482	493	451
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000051	chr1	-	junction_1	13697129	13697579	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2463	835	820	808
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000051	chr1	-	junction_2	13697662	13700288	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2230	771	714	745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000051	chr1	-	junction_3	13700438	13708454	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2624	868	910	846
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000051	chr1	-	junction_4	13708634	13717608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2445	818	812	815
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000051	chr1	-	junction_5	13717736	13720944	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2151	727	687	737
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000051	chr1	-	junction_6	13721109	13730552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2403	835	791	777
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000133	chr1	-	junction_1	30982405	30983012	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2271	752	823	696
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000133	chr1	-	junction_2	30983088	30983616	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2378	789	833	756
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000133	chr1	-	junction_3	30983748	30984018	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2539	843	886	810
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000133	chr1	-	junction_4	30984112	30985118	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2417	798	830	789
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000133	chr1	-	junction_5	30985721	30988629	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1976	685	645	646
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000134	chr1	-	junction_1	30982405	30983012	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2271	752	823	696
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000134	chr1	-	junction_2	30983088	30983616	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2378	789	833	756
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000134	chr1	-	junction_3	30983748	30984018	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2539	843	886	810
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000134	chr1	-	junction_4	30984112	30985118	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2417	798	830	789
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000134	chr1	-	junction_5	30985718	30988629	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	443	170	142	131
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000156	chr1	+	junction_1	34479231	34481990	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	580	188	216	176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000156	chr1	+	junction_2	34482075	34482458	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	615	220	204	191
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000156	chr1	+	junction_3	34482569	34482643	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	524	174	183	167
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000156	chr1	+	junction_4	34482777	34482849	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	562	179	192	191
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000156	chr1	+	junction_5	34483005	34483077	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	463	153	156	154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000156	chr1	+	junction_6	34483173	34483276	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	482	155	157	170
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000156	chr1	+	junction_7	34483351	34493524	?????	novel	known	novel	0	-5687	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	33	13	11	9
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000169	chr1	-	junction_1	36463585	36463918	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	121	37	50	34
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000169	chr1	-	junction_2	36464039	36467182	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	173	50	60	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000169	chr1	-	junction_3	36467298	36467380	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	197	47	76	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000169	chr1	-	junction_4	36467543	36477830	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	182	59	57	66
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000169	chr1	-	junction_5	36477914	36478689	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	195	61	69	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000169	chr1	-	junction_6	36478808	36482571	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	153	52	50	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000169	chr1	-	junction_7	36482691	36484130	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	216	74	62	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000189	chr1	-	junction_1	37459709	37467422	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	450	160	143	147
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000189	chr1	-	junction_2	37467507	37468949	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	395	119	151	125
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000201	chr1	+	junction_1	37911407	37913944	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	65	24	20	21
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_1	38073185	38075073	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	450	153	158	139
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_2	38075355	38076283	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	628	201	234	193
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_3	38076392	38076627	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	627	212	217	198
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_4	38076739	38079753	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	583	192	225	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_5	38079822	38080777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	570	196	208	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_6	38080920	38083784	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	660	208	238	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_7	38083917	38084404	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	623	200	228	195
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_8	38084588	38084728	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	676	213	250	213
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_9	38084891	38085692	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	606	207	221	178
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_10	38085825	38087873	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	668	235	233	200
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_11	38088006	38088097	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	744	244	278	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_12	38088175	38088256	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	743	226	299	218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_13	38088422	38089267	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	705	240	250	215
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_14	38089407	38090203	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	704	232	258	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	junction_15	38090366	38090686	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	726	260	250	216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000421	chr1	+	junction_1	63216451	63216912	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2982	1072	987	923
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000421	chr1	+	junction_2	63217036	63217597	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3112	1076	1048	988
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000421	chr1	+	junction_3	63217725	63217990	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3570	1256	1118	1196
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000421	chr1	+	junction_4	63218058	63218406	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3221	1089	1059	1073
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000421	chr1	+	junction_5	63218537	63218616	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000420	chr1	+	junction_1	63216451	63216881	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	122	36	34	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000420	chr1	+	junction_2	63217036	63217597	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3112	1076	1048	988
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000420	chr1	+	junction_3	63217725	63217990	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3570	1256	1118	1196
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000420	chr1	+	junction_4	63218058	63218406	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3221	1089	1059	1073
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000420	chr1	+	junction_5	63218533	63218616	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3124	1056	1047	1021
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_1	63769851	63770558	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	319	107	114	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_2	63771381	63773890	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	432	160	129	143
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_3	63773995	63774621	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	372	130	119	123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_4	63774731	63775003	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	308	112	90	106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_5	63775128	63776937	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	354	129	111	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_6	63777078	63778340	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	393	142	130	121
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_7	63778514	63785000	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	429	135	157	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_8	63785165	63787116	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	395	125	141	129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_9	63787330	63788844	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	440	148	151	141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_10	63788930	63790422	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	507	164	169	174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	junction_11	63790538	63791455	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	407	132	138	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_1	74275770	74275976	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1389	473	433	483
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_2	74276059	74285238	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2096	696	701	699
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_3	74285274	74287290	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2050	671	697	682
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_4	74287404	74290412	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1867	651	552	664
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_5	74290459	74293986	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2164	722	684	758
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_6	74294174	74295116	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2293	806	760	727
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_7	74295211	74301617	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2103	693	744	666
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_8	74301745	74302901	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2427	854	769	804
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_9	74303003	74303511	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	2568	859	865	844
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	junction_10	74303613	74306929	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2203	712	769	722
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000609	chr1	+	junction_1	85721543	85746077	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	335	120	105	110
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000609	chr1	+	junction_2	85746235	85763043	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	370	129	123	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000609	chr1	+	junction_3	85763209	85765006	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	443	156	146	141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000609	chr1	+	junction_4	85765126	85769918	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	430	159	135	136
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000609	chr1	+	junction_5	85770088	85772313	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	356	125	109	122
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000609	chr1	+	junction_6	85772374	85775130	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	402	129	141	132
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000609	chr1	+	junction_7	85775197	85775997	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	387	135	134	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000609	chr1	+	junction_8	85776142	85776753	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	406	133	147	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000665	chr1	+	junction_1	87141742	87147302	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	965	317	321	327
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000665	chr1	+	junction_2	87147418	87148641	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2313	751	757	805
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000665	chr1	+	junction_3	87148777	87152074	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2417	790	803	824
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000665	chr1	+	junction_4	87152180	87153571	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2246	773	751	722
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000665	chr1	+	junction_5	87153725	87153818	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2316	778	776	762
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000665	chr1	+	junction_6	87153956	87155522	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2105	695	752	658
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000880	chr1	-	junction_1	133531815	133534238	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4880	1623	1681	1576
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000880	chr1	-	junction_2	133534318	133536634	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4068	1367	1359	1342
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000880	chr1	-	junction_3	133536698	133537887	?????	novel	known	novel	0	14	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000890	chr1	-	junction_1	134005442	134006649	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	77	27	29	21
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_1	160862765	160863321	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3576	1212	1161	1203
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_2	160863375	160863552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6198	2080	1980	2138
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_3	160863585	160863777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5759	1917	1865	1977
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_4	160863815	160864118	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5220	1783	1653	1784
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_5	160864150	160864389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5360	1841	1721	1798
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_6	160864423	160864857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3218	1108	1020	1090
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_7	160864886	160865074	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3085	1030	1010	1045
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_8	160865118	160865564	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	5177	1712	1718	1747
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_9	160865608	160865794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5569	1846	1831	1892
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	junction_10	160865843	160866026	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4541	1518	1471	1552
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_1	160862765	160863321	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3576	1212	1161	1203
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_2	160863375	160863552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6198	2080	1980	2138
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_3	160863585	160863777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5759	1917	1865	1977
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_4	160863815	160864118	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5220	1783	1653	1784
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_5	160864150	160864389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5360	1841	1721	1798
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_6	160864423	160864693	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1389	483	440	466
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_7	160864735	160864857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1206	405	391	410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_8	160864886	160865074	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3085	1030	1010	1045
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_9	160865118	160865564	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5177	1712	1718	1747
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_10	160865608	160865794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5569	1846	1831	1892
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	junction_11	160865843	160866026	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4541	1518	1471	1552
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	junction_1	160863375	160863552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6198	2080	1980	2138
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	junction_2	160863585	160863777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5759	1917	1865	1977
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	junction_3	160863815	160864118	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5220	1783	1653	1784
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	junction_4	160864150	160864389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5360	1841	1721	1798
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	junction_5	160864735	160864857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1206	405	391	410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	junction_6	160864886	160865074	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3085	1030	1010	1045
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	junction_7	160865118	160865564	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5177	1712	1718	1747
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	junction_8	160865608	160865794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5569	1846	1831	1892
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	junction_9	160865843	160866026	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4541	1518	1471	1552
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001072	chr1	+	junction_1	160863375	160863552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6198	2080	1980	2138
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001072	chr1	+	junction_2	160863585	160863777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5759	1917	1865	1977
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001072	chr1	+	junction_3	160863815	160864118	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5220	1783	1653	1784
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001072	chr1	+	junction_4	160864150	160864389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5360	1841	1721	1798
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001072	chr1	+	junction_5	160864423	160865794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	131	48	40	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001072	chr1	+	junction_6	160865843	160866026	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4541	1518	1471	1552
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001108	chr1	-	junction_1	161069420	161071144	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1772	607	604	561
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001108	chr1	-	junction_2	161071292	161071765	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1839	617	637	585
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001108	chr1	-	junction_3	161071913	161074826	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1689	569	620	500
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001108	chr1	-	junction_4	161074984	161076928	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	63	20	24	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001108	chr1	-	junction_5	161077040	161078591	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	50	15	24	11
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001107	chr1	-	junction_1	161069420	161071144	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1772	607	604	561
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001107	chr1	-	junction_2	161071292	161071765	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1839	617	637	585
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001107	chr1	-	junction_3	161071913	161078591	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	42	16	9	17
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001153	chr1	-	junction_1	165421247	165429318	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	404	136	128	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001153	chr1	-	junction_2	165429425	165432178	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	372	138	121	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001153	chr1	-	junction_3	165432312	165433177	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	833	259	286	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001153	chr1	-	junction_4	165433392	165436006	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	750	269	228	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001153	chr1	-	junction_5	165436174	165461871	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	826	292	246	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001154	chr1	-	junction_1	165421247	165432178	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	343	126	110	107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001154	chr1	-	junction_2	165432312	165433177	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	833	259	286	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001154	chr1	-	junction_3	165433392	165436006	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	750	269	228	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001154	chr1	-	junction_4	165436174	165461871	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	826	292	246	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001162	chr1	+	junction_1	165591708	165597381	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	459	172	138	149
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001162	chr1	+	junction_2	165597502	165598200	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	461	172	155	134
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001162	chr1	+	junction_3	165598386	165601412	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	511	170	152	189
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001166	chr1	+	junction_1	165958174	165974207	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	180	63	60	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001166	chr1	+	junction_2	165974363	165980136	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	203	66	74	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001166	chr1	+	junction_3	165980354	165985081	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	233	79	85	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001166	chr1	+	junction_4	165985238	165991341	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	193	62	64	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001166	chr1	+	junction_5	165991462	165992148	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	185	60	64	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001166	chr1	+	junction_6	165992285	165992715	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	176	54	57	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001199	chr1	-	junction_1	170957475	170963561	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	940	318	304	318
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001199	chr1	-	junction_2	170963726	170966262	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	943	344	299	300
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001199	chr1	-	junction_3	170966325	170971126	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	986	342	318	326
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001199	chr1	-	junction_4	170971229	170973324	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	865	321	263	281
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001199	chr1	-	junction_5	170973382	170978127	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	578	209	191	178
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001217	chr1	+	junction_1	171049548	171052855	?????	novel	novel	known	-47	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	84	24	26	34
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001217	chr1	+	junction_2	171052936	171053234	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	122	40	39	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001217	chr1	+	junction_3	171053368	171053711	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	143	50	47	46
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_1	171062657	171062841	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1538	511	544	483
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_2	171062900	171063925	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1418	443	523	452
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_3	171064006	171064174	?????	novel	novel	known	-4	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_4	171064271	171064708	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1497	494	504	499
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_5	171064839	171065513	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1294	417	478	399
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_6	171065634	171065855	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1380	447	488	445
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_7	171065942	171066083	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1329	433	473	423
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_8	171066162	171066278	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1440	495	496	449
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_9	171066467	171066842	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1386	479	455	452
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_10	171066964	171068515	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1321	451	459	411
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_11	171068707	171073659	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1401	455	507	439
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	junction_12	171073767	171074562	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1142	379	418	345
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001234	chr1	-	junction_1	171116545	171116743	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	598	223	189	186
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001234	chr1	-	junction_2	171116835	171117090	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	651	231	220	200
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001234	chr1	-	junction_3	171117168	171117456	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	530	175	187	168
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001234	chr1	-	junction_4	171117521	171117721	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	587	189	203	195
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001234	chr1	-	junction_5	171117790	171122206	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	608	210	204	194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001234	chr1	-	junction_6	171122401	171122493	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	257	75	85	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001251	chr1	+	junction_1	171173355	171184097	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1973	642	702	629
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001251	chr1	+	junction_2	171184187	171184272	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2135	691	762	682
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001251	chr1	+	junction_3	171184397	171185423	?????	novel	known	novel	0	-6	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	61	10	27	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_1	171894364	171894897	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	474	170	158	146
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_2	171895111	171895355	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	545	194	185	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_3	171895511	171895752	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	517	159	182	176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_4	171895841	171896128	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	536	170	179	187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_5	171896225	171896328	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	564	199	167	198
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_6	171896432	171897542	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	511	157	166	188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_7	171897716	171898817	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	511	158	183	170
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_8	171898896	171899031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	465	137	166	162
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_9	171899137	171899687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	502	164	164	174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_10	171899841	171900032	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	485	153	182	150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_11	171900143	171900343	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	544	167	199	178
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_12	171900495	171901839	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	595	224	187	184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_13	171901986	171902481	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	519	213	166	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_14	171902604	171902971	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	527	186	172	169
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_15	171903096	171908778	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	517	186	177	154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	junction_16	171908884	171910167	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	539	165	186	188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	junction_1	175429133	175431503	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1049	344	348	357
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	junction_2	175431658	175433620	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	851	307	293	251
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	junction_3	175433749	175435378	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	junction_4	175435587	175437202	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	865	292	284	289
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	junction_5	175437369	175439712	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	704	240	243	221
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	junction_6	175439896	175442302	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	771	272	252	247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	junction_7	175442480	175444094	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	803	298	256	249
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	junction_8	175444206	175446616	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	816	299	256	261
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	junction_9	175446752	175453016	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	872	257	301	314
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_1	179496111	179498147	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	194	61	68	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_2	179498261	179503955	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	188	71	63	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_3	179504037	179505605	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	177	62	55	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_4	179505736	179506444	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	200	66	59	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_5	179506495	179507149	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	221	71	75	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_6	179507281	179508056	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	189	54	69	66
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_7	179508175	179508997	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	213	68	78	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_8	179509118	179509215	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	177	55	64	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_9	179509273	179511769	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	160	52	53	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_10	179511882	179513260	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	195	65	63	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	junction_11	179513343	179514136	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	201	58	69	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_1	180396719	180401216	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1919	599	721	599
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_2	180401383	180405147	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1900	641	663	596
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_3	180405264	180406718	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1772	605	617	550
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_4	180406934	180408097	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1828	581	659	588
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_5	180408201	180410322	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1763	598	633	532
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_6	180410440	180411294	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1402	481	484	437
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_7	180411472	180413407	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1782	575	637	570
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_8	180413556	180414825	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1757	566	627	564
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_9	180414967	180415485	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1767	600	627	540
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_10	180415726	180415923	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2028	657	755	616
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_11	180415993	180416214	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2023	650	745	628
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_12	180416348	180416962	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1886	595	677	614
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_13	180417159	180418782	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1794	571	625	598
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_14	180418912	180420412	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2149	678	764	707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_15	180420497	180421607	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1896	602	655	639
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_16	180421731	180422219	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2273	755	818	700
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_17	180422349	180424854	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2055	690	752	613
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_18	180424954	180425775	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1798	596	647	555
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_19	180425929	180426517	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2140	723	786	631
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_20	180426646	180427157	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2084	701	765	618
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_21	180427220	180427660	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2330	789	822	719
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	junction_22	180427776	180428014	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2430	818	838	774
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001335	chr1	-	junction_1	180630768	180637681	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	1	55	0	0	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001335	chr1	-	junction_2	180637836	180639363	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2719	922	926	871
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001335	chr1	-	junction_3	180639515	180641035	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2337	762	781	794
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001338	chr1	-	junction_1	180630771	180637681	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	2558	855	882	821
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001338	chr1	-	junction_2	180637836	180639363	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2719	922	926	871
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001338	chr1	-	junction_3	180639510	180641035	?????	novel	novel	known	-5	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001370	chr1	+	junction_1	180978627	180981299	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1843	648	571	624
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001370	chr1	+	junction_2	180981369	180983423	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1855	642	578	635
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001370	chr1	+	junction_3	180983537	180989639	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2115	762	688	665
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001370	chr1	+	junction_4	180989781	180993745	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2130	745	673	712
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001691	chr10	+	junction_1	43098057	43174794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	76	30	20	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001691	chr10	+	junction_2	43174930	43221523	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	81	24	20	37
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001691	chr10	+	junction_3	43221723	43248130	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	65	24	19	22
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001691	chr10	+	junction_4	43248206	43269866	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	61	23	18	20
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001691	chr10	+	junction_5	43270041	43271556	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	73	21	30	22
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001691	chr10	+	junction_6	43271689	43289510	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	70	29	21	20
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001691	chr10	+	junction_7	43289544	43315794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	74	30	21	23
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001717	chr10	-	junction_1	57393389	57395458	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	329	92	119	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001717	chr10	-	junction_2	57395690	57395793	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	261	80	95	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001717	chr10	-	junction_3	57395939	57399051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	236	83	84	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001717	chr10	-	junction_4	57399313	57400056	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	248	73	94	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001717	chr10	-	junction_5	57400195	57400415	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	200	73	69	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001717	chr10	-	junction_6	57400496	57401420	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	187	68	61	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001717	chr10	-	junction_7	57401591	57403760	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	210	73	77	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001717	chr10	-	junction_8	57403923	57408452	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	192	65	62	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001776	chr10	+	junction_1	61516193	61520658	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1287	465	430	392
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001776	chr10	+	junction_2	61520733	61520844	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1387	455	472	460
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001776	chr10	+	junction_3	61520965	61521332	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1236	429	397	410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001776	chr10	+	junction_4	61521399	61522153	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1415	494	462	459
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001776	chr10	+	junction_5	61522258	61525552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1130	352	376	402
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001776	chr10	+	junction_6	61525685	61527063	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1281	409	443	429
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001778	chr10	+	junction_1	61532522	61534076	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	269	95	78	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001778	chr10	+	junction_2	61534208	61535221	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	284	94	100	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001778	chr10	+	junction_3	61535408	61537812	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	276	81	101	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001836	chr10	-	junction_1	69174427	69176310	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	2056	710	702	644
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001836	chr10	-	junction_2	69176453	69176544	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2242	730	783	729
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001836	chr10	-	junction_3	69176709	69178369	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2258	743	763	752
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001836	chr10	-	junction_4	69178541	69180890	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2087	722	682	683
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001836	chr10	-	junction_5	69181015	69181904	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2236	773	734	729
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001836	chr10	-	junction_6	69182062	69185925	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2375	820	773	782
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001836	chr10	-	junction_7	69185989	69188665	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2268	780	745	743
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001849	chr10	-	junction_1	71091705	71092444	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	139	51	47	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001849	chr10	-	junction_2	71092539	71094030	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	135	49	42	44
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001849	chr10	-	junction_3	71094137	71095571	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	135	52	44	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001849	chr10	-	junction_4	71095650	71097913	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	148	53	45	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001849	chr10	-	junction_5	71097946	71098028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	148	44	53	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001849	chr10	-	junction_6	71098093	71120930	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	140	31	61	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001975	chr10	-	junction_1	79377034	79377347	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	200	62	82	56
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001975	chr10	-	junction_2	79377769	79378238	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	133	44	48	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001975	chr10	-	junction_3	79378316	79378430	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	205	62	78	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001975	chr10	-	junction_4	79378556	79380353	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	230	80	89	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001975	chr10	-	junction_5	79380449	79380522	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	232	79	92	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001975	chr10	-	junction_6	79380605	79380878	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	227	82	73	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002003	chr10	+	junction_1	79540419	79545504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6382	2132	2105	2145
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002003	chr10	+	junction_2	79545662	79545891	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7448	2635	2395	2418
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002003	chr10	+	junction_3	79545975	79546093	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6520	2293	2109	2118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002003	chr10	+	junction_4	79546237	79546471	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6197	2139	2042	2016
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002003	chr10	+	junction_5	79546755	79547301	?????	novel	known	novel	0	26	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002080	chr10	+	junction_1	79978441	79979665	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2436	803	877	756
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002080	chr10	+	junction_2	79979820	79981052	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2513	798	887	828
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002080	chr10	+	junction_3	79981142	79981260	?????	novel	known	novel	0	-4	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	116	43	42	31
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002088	chr10	+	junction_1	80009009	80010042	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	33	15	11	7
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002088	chr10	+	junction_2	80010160	80010650	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	59	22	19	18
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002102	chr10	+	junction_1	80085326	80088883	?????	novel	known	novel	0	24	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002102	chr10	+	junction_2	80088992	80089493	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2414	789	787	838
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002102	chr10	+	junction_3	80089618	80090673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2193	746	731	716
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002102	chr10	+	junction_4	80090854	80090923	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2168	731	719	718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002102	chr10	+	junction_5	80090971	80091757	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2162	742	725	695
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002102	chr10	+	junction_6	80091847	80092469	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2110	736	674	700
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002115	chr10	+	junction_1	80128695	80129475	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8475	2824	2869	2782
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002115	chr10	+	junction_2	80129711	80129800	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7729	2477	2690	2562
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002117	chr10	+	junction_1	80128452	80128608	?????	novel	novel	known	134	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	409	138	126	145
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002117	chr10	+	junction_2	80128695	80129475	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8475	2824	2869	2782
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002117	chr10	+	junction_3	80129711	80129800	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7729	2477	2690	2562
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002122	chr10	+	junction_1	80128695	80129475	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8475	2824	2869	2782
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002122	chr10	+	junction_2	80129711	80129804	?????	novel	known	novel	0	-4	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	38	14	14	10
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002123	chr10	+	junction_1	80128695	80129475	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8475	2824	2869	2782
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002123	chr10	+	junction_2	80129699	80129800	?????	novel	novel	known	-12	0	TRUE	GTAG	canonical	TRUE	NA	NA	NA	3	11	3	2	6
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002222	chr10	+	junction_1	80766194	80766281	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	101	28	31	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002222	chr10	+	junction_2	80766384	80766862	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	113	33	44	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002222	chr10	+	junction_3	80767086	80767366	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	88	25	28	35
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_1	81012564	81013498	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	6189	2014	2209	1966
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_2	81013714	81013886	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6407	2025	2312	2070
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_3	81014069	81014514	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6940	2286	2441	2213
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_4	81014727	81014914	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7110	2365	2587	2158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_5	81015094	81015179	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6697	2199	2379	2119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_6	81015286	81015377	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6005	1930	2153	1922
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_7	81015635	81015715	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_8	81015912	81015986	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6865	2253	2519	2093
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_9	81016246	81016398	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7013	2296	2576	2141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_10	81016507	81016637	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5618	1912	2008	1698
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_11	81016992	81017061	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7305	2377	2585	2343
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_12	81017245	81017326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8256	2616	2957	2683
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	junction_13	81017460	81017722	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7978	2600	2879	2499
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_1	81012564	81013498	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6189	2014	2209	1966
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_2	81013714	81013886	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6407	2025	2312	2070
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_3	81014062	81014514	?????	novel	novel	known	-7	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_4	81014727	81014914	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7110	2365	2587	2158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_5	81015094	81015179	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6697	2199	2379	2119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_6	81015286	81015377	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6005	1930	2153	1922
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_7	81015631	81015715	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7081	2343	2608	2130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_8	81015912	81015986	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6865	2253	2519	2093
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_9	81016246	81016398	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7013	2296	2576	2141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_10	81016507	81016637	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5618	1912	2008	1698
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_11	81016992	81017061	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7305	2377	2585	2343
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_12	81017245	81017326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8256	2616	2957	2683
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	junction_13	81017460	81017722	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7978	2600	2879	2499
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_1	81012564	81013498	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6189	2014	2209	1966
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_2	81013714	81013886	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6407	2025	2312	2070
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_3	81014069	81014514	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6940	2286	2441	2213
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_4	81014727	81014914	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7110	2365	2587	2158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_5	81015094	81015179	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6697	2199	2379	2119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_6	81015286	81015377	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6005	1930	2153	1922
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_7	81015631	81015715	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7081	2343	2608	2130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_8	81015912	81015986	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6865	2253	2519	2093
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_9	81016248	81016398	?????	novel	novel	known	2	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_10	81016507	81016637	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5618	1912	2008	1698
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_11	81016992	81017061	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7305	2377	2585	2343
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_12	81017245	81017326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8256	2616	2957	2683
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	junction_13	81017460	81017722	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7978	2600	2879	2499
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_1	81013714	81013886	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6407	2025	2312	2070
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_2	81014069	81014514	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6940	2286	2441	2213
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_3	81014727	81014914	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7110	2365	2587	2158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_4	81015094	81015179	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6697	2199	2379	2119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_5	81015286	81015377	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6005	1930	2153	1922
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_6	81015631	81015715	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7081	2343	2608	2130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_7	81015912	81015986	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6865	2253	2519	2093
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_8	81016246	81016398	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7013	2296	2576	2141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_9	81016507	81016637	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5618	1912	2008	1698
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_10	81016992	81017061	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7305	2377	2585	2343
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_11	81017245	81017326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8256	2616	2957	2683
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	junction_12	81017460	81017722	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7978	2600	2879	2499
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002290	chr10	+	junction_1	81220413	81221552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	792	267	278	247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002290	chr10	+	junction_2	81221882	81222246	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	788	266	269	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002290	chr10	+	junction_3	81222324	81223073	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	742	238	244	260
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002290	chr10	+	junction_4	81223315	81223540	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	833	270	316	247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_1	81323440	81323513	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	472	174	160	138
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_2	81323593	81323680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	446	156	167	123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_3	81323735	81324028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	415	143	146	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_4	81324193	81324261	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	251	74	109	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_5	81324301	81324382	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	414	133	170	111
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_6	81324471	81325635	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	402	128	149	125
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_7	81325955	81326060	?????	known	known	known	0	0	FALSE	GCAG	canonical	FALSE	NA	NA	NA	3	395	127	142	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_8	81326150	81327003	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	409	133	150	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_9	81327108	81327810	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	449	147	157	145
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_10	81327892	81328661	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	441	135	170	136
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_11	81328757	81328896	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	422	140	153	129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_12	81329042	81329182	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	382	111	152	119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	junction_13	81329374	81331913	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	345	111	131	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_1	86615176	86640644	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	40	7	18	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_2	86640830	86647393	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	48	12	22	14
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_3	86647469	86648188	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	53	18	16	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_4	86648245	86651717	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	53	21	17	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_5	86651809	86652816	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	33	9	11	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_6	86652955	86656070	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	45	17	15	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_7	86656132	86656531	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	43	18	11	14
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_8	86656635	86656773	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	36	8	15	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_9	86656876	86658927	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	34	15	12	7
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_10	86659010	86660050	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	31	12	10	9
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_11	86660138	86661018	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	42	17	16	9
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_12	86661160	86667563	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	34	12	8	14
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	junction_13	86667629	86669794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23	8	5	10
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002403	chr10	+	junction_1	88295575	88298322	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	124	40	39	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002403	chr10	+	junction_2	88298466	88299224	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	122	42	42	38
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002403	chr10	+	junction_3	88299289	88299697	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	130	40	45	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002403	chr10	+	junction_4	88299733	88302300	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	104	32	40	32
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002403	chr10	+	junction_5	88302419	88303144	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	116	32	49	35
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002403	chr10	+	junction_6	88303245	88305407	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	126	44	46	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002403	chr10	+	junction_7	88305507	88308537	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	125	32	43	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002403	chr10	+	junction_8	88308643	88308766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	120	44	41	35
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002488	chr10	-	junction_1	95248973	95250692	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	494	156	148	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002488	chr10	-	junction_2	95251054	95252479	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	447	151	142	154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002512	chr10	+	junction_1	96453335	96454137	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	461	154	158	149
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002522	chr10	+	junction_1	105677517	105678402	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	528	174	185	169
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002522	chr10	+	junction_2	105678710	105681210	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	527	166	184	177
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002522	chr10	+	junction_3	105681311	105682877	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	411	130	155	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_1	111309213	111317140	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1948	687	636	625
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_2	111317178	111321359	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	2169	762	688	719
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_3	111321446	111322504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2158	733	716	709
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_4	111322608	111325888	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2048	676	700	672
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_5	111326031	111326237	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1826	583	643	600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_6	111326319	111326869	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1615	533	517	565
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_7	111326999	111327947	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2128	703	707	718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_8	111328020	111328702	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2194	744	743	707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_9	111328843	111329157	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2374	750	843	781
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_10	111329308	111330031	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_11	111330155	111330655	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2234	776	730	728
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_12	111330686	111331185	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1699	597	545	557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_13	111331237	111331900	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1725	618	574	533
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	junction_14	111331967	111332614	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	684	239	235	210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_1	111309213	111317140	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1948	687	636	625
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_2	111317178	111321359	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2169	762	688	719
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_3	111321446	111322504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2158	733	716	709
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_4	111322608	111325888	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2048	676	700	672
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_5	111326031	111326237	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1826	583	643	600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_6	111326323	111326869	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_7	111326999	111327947	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2128	703	707	718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_8	111328020	111328702	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2194	744	743	707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_9	111328843	111329157	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2374	750	843	781
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_10	111329304	111329410	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	980	194	400	386
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_11	111329431	111330031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1442	403	534	505
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_12	111330155	111330655	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2234	776	730	728
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_13	111330686	111331185	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1699	597	545	557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	junction_14	111331237	111331900	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1725	618	574	533
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_1	111309213	111317140	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1948	687	636	625
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_2	111317178	111321359	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2169	762	688	719
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_3	111321446	111322504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2158	733	716	709
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_4	111322608	111325888	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2048	676	700	672
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_5	111326031	111326237	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1826	583	643	600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_6	111326319	111326869	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1615	533	517	565
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_7	111326999	111327947	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2128	703	707	718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_8	111328020	111328702	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2194	744	743	707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_9	111328843	111329157	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2374	750	843	781
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_10	111329318	111330031	?????	novel	novel	known	14	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_11	111330155	111330655	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2234	776	730	728
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_12	111330686	111331185	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1699	597	545	557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_13	111331237	111331900	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1725	618	574	533
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	junction_14	111331967	111332614	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	684	239	235	210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_1	116887182	116888920	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2581	791	945	845
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_2	116889063	116889944	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2754	875	996	883
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_3	116890045	116890781	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2612	883	913	816
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_4	116890886	116891011	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2279	788	791	700
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_5	116891141	116891944	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2152	754	723	675
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_6	116892065	116893078	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2501	841	848	812
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_7	116893183	116893695	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2214	707	812	695
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_8	116893824	116894002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1936	655	679	602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_9	116894104	116896552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2109	683	750	676
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_10	116896756	116897198	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	1	39	0	0	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_11	116897316	116897409	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2206	748	739	719
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_12	116897487	116897929	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2296	758	782	756
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_13	116898042	116898721	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2366	798	799	769
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_14	116898788	116898880	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2205	728	757	720
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	junction_15	116898956	116899610	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1940	658	662	620
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002700	chr10	-	junction_1	126904060	126904137	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	545	209	151	185
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002700	chr10	-	junction_2	126904252	126904353	?????	novel	known	novel	0	-5	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002700	chr10	-	junction_3	126904481	126904776	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	633	225	197	211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002700	chr10	-	junction_4	126904858	126905214	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	586	204	183	199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002700	chr10	-	junction_5	126905383	126905983	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	666	224	219	223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_1	127353786	127353893	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2030	678	712	640
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_2	127354002	127354093	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1924	651	676	597
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_3	127354250	127354339	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1989	681	666	642
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_4	127354440	127354660	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2162	742	754	666
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_5	127354827	127354989	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2131	745	728	658
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_6	127355130	127355257	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2083	658	750	675
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_7	127355381	127355498	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2001	670	706	625
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_8	127355581	127355839	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2189	731	739	719
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_9	127356041	127356206	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1955	695	646	614
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_10	127356287	127356786	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2043	672	683	688
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	junction_11	127356985	127358156	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1501	486	526	489
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002770	chr10	+	junction_1	127872430	127882036	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11788	3927	3888	3973
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002770	chr10	+	junction_2	127882127	127882597	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002770	chr10	+	junction_3	127882676	127883526	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11448	3765	3832	3851
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002770	chr10	+	junction_4	127883674	127883867	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10891	3656	3662	3573
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002770	chr10	+	junction_5	127883997	127884113	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10794	3625	3594	3575
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002770	chr10	+	junction_6	127884237	127884361	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10875	3627	3648	3600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	junction_1	127919323	127919760	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10408	3547	3550	3311
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	junction_2	127919944	127920165	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9648	3234	3252	3162
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	junction_3	127920341	127920959	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8904	2933	3032	2939
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	junction_4	127921082	127921310	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9425	3162	3277	2986
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	junction_5	127921496	127921906	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10941	3650	3728	3563
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	junction_6	127922066	127922166	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10703	3654	3599	3450
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	junction_7	127922290	127924189	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11693	3973	3899	3821
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	junction_8	127924403	127924825	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10302	3457	3528	3317
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	junction_9	127925028	127925887	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11272	3737	3820	3715
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002809	chr10	+	junction_1	127925028	127925887	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11272	3737	3820	3715
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002852	chr10	-	junction_1	128330353	128330458	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002852	chr10	-	junction_2	128330537	128330922	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	2	3	0	1	2
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002852	chr10	-	junction_3	128331097	128332121	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	2	2	1	0	1
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002852	chr10	-	junction_4	128332266	128332482	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	2	5	0	2	3
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002852	chr10	-	junction_5	128332511	128333069	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	1	1	0	1	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_1	128394841	128394930	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2020	680	733	607
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_2	128394985	128395098	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2121	692	766	663
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_3	128395227	128395306	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2186	725	785	676
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_4	128395402	128395950	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2036	674	714	648
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_5	128396164	128396527	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2131	693	758	680
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_6	128396607	128396787	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2109	671	789	649
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_7	128396852	128398695	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1993	637	727	629
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_8	128398789	128398934	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1884	634	648	602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_9	128399005	128399092	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1914	647	654	613
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_10	128399199	128399445	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2205	755	766	684
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	junction_11	128399575	128401608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1853	609	694	550
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002894	chr10	-	junction_1	128460506	128461071	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002894	chr10	-	junction_2	128461207	128461931	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	21403	7177	7180	7046
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002923	chr10	-	junction_1	128654885	128655822	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	886	301	305	280
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002923	chr10	-	junction_2	128655975	128656129	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	748	256	240	252
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002923	chr10	-	junction_3	128656384	128657410	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	462	155	154	153
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002948	chr11	-	junction_1	3200366	3202159	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1911	704	579	628
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002948	chr11	-	junction_2	3202283	3202643	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2056	717	656	683
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002948	chr11	-	junction_3	3202812	3204511	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2052	740	641	671
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002948	chr11	-	junction_4	3204643	3206542	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1957	678	661	618
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002948	chr11	-	junction_5	3206713	3209305	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1733	578	548	607
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002948	chr11	-	junction_6	3209376	3212488	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1874	609	643	622
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002948	chr11	-	junction_7	3212665	3214766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1889	647	621	621
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002948	chr11	-	junction_8	3214891	3216268	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2057	671	708	678
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_1	4845379	4849790	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	228	76	85	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_2	4849907	4851151	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	287	100	96	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_3	4851296	4852085	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	89	98	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_4	4852200	4852334	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	286	103	96	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_5	4852433	4854094	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	271	98	86	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_6	4854242	4855640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	257	83	102	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_7	4855756	4860626	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	261	88	91	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_8	4860760	4862780	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	290	89	107	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_9	4862859	4864269	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	88	99	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_10	4864311	4864521	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	246	87	79	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_11	4864622	4865488	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	254	91	88	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_12	4865598	4868123	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	295	119	89	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_13	4868226	4869732	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	259	89	78	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_14	4869830	4870376	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	288	94	111	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_15	4870492	4871921	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	325	92	122	111
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_16	4872026	4872138	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	274	81	88	105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_17	4872227	4874747	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	311	104	118	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_18	4874864	4876045	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	336	121	112	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	junction_19	4876237	4878674	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	317	125	94	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003080	chr11	+	junction_1	6365985	6368100	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	147	45	60	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003080	chr11	+	junction_2	6368132	6368225	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	37102	11972	13044	12086
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003080	chr11	+	junction_3	6368315	6369112	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	37918	12346	13336	12236
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003080	chr11	+	junction_4	6369286	6369477	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	36680	12015	13025	11640
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003163	chr11	+	junction_1	20151653	20165629	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1848	650	586	612
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003163	chr11	+	junction_2	20165703	20168812	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1941	660	631	650
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003163	chr11	+	junction_3	20168909	20173083	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2161	707	720	734
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003163	chr11	+	junction_4	20173180	20174366	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2148	677	740	731
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003163	chr11	+	junction_5	20174499	20174647	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1899	610	609	680
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003231	chr11	-	junction_1	29463677	29464916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	382	138	131	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003248	chr11	-	junction_1	29496030	29496290	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16484	5440	5767	5277
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003248	chr11	-	junction_2	29496423	29496702	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11093	3678	3906	3509
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003248	chr11	-	junction_3	29497261	29497680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7984	2581	2770	2633
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_1	33102853	33103985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19753	6584	6569	6600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_2	33104061	33105998	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_3	33106105	33106663	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23004	7658	7531	7815
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_4	33106748	33106990	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20991	7077	6902	7012
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_5	33107049	33109933	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18792	6457	6178	6157
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_6	33109996	33110333	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16996	5820	5730	5446
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_7	33110441	33110827	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19618	6695	6494	6429
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_8	33110922	33111105	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16927	5677	5664	5586
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_9	33111226	33111547	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19709	6570	6580	6559
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	junction_10	33111628	33112921	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	21678	7254	7250	7174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003380	chr11	+	junction_1	40624982	40626844	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1212	427	395	390
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003380	chr11	+	junction_2	40626894	40627319	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1122	386	364	372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003380	chr11	+	junction_3	40627472	40629985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1147	403	342	402
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003454	chr11	+	junction_1	49103604	49104416	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	120	33	45	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003454	chr11	+	junction_2	49104470	49105890	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	110	33	38	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_1	50116567	50121506	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	228	70	78	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_2	50121693	50121787	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	214	75	74	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_3	50121929	50122017	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	219	72	78	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_4	50122156	50122565	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_5	50122613	50122850	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	194	61	77	56
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_6	50122965	50123133	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	205	61	79	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_7	50123210	50123390	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	212	77	80	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_8	50123506	50123771	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	201	55	78	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_9	50123903	50124102	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	200	62	72	66
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_10	50124211	50124290	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	230	76	74	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_11	50124485	50124909	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	194	73	77	44
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_12	50124989	50125070	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	198	69	78	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_13	50125159	50125236	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	205	62	83	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	junction_14	50125350	50125432	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	193	65	68	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_1	50269255	50270294	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	234	71	87	76
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_2	50270451	50270647	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	259	95	78	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_3	50270792	50272285	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	224	76	88	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_4	50272425	50273363	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	270	95	94	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_5	50273543	50273626	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	400	123	154	123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_6	50273699	50273754	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	395	125	156	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_7	50273889	50274005	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	470	142	178	150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_8	50274142	50274506	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	463	156	173	134
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_9	50274567	50274657	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	428	147	150	131
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_10	50274718	50275470	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	42	18	12	12
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_11	50275564	50275967	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	492	154	176	162
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	junction_12	50276018	50276603	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	500	160	183	157
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003544	chr11	-	junction_1	51534976	51535101	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	359	129	116	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003544	chr11	-	junction_2	51535357	51535999	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	360	145	118	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003544	chr11	-	junction_3	51536513	51536753	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	374	128	133	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003544	chr11	-	junction_4	51537102	51541504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	337	115	113	109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003579	chr11	+	junction_1	52251980	52265125	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3003	965	1088	950
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003579	chr11	+	junction_2	52265196	52265744	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3525	1120	1296	1109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003579	chr11	+	junction_3	52265795	52267217	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3208	1040	1163	1005
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003579	chr11	+	junction_4	52267371	52267474	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3482	1114	1327	1041
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003579	chr11	+	junction_5	52267528	52274676	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3154	984	1199	971
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003579	chr11	+	junction_6	52274905	52276409	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3141	1016	1198	927
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003579	chr11	+	junction_7	52276561	52278242	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3356	1060	1253	1043
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003579	chr11	+	junction_8	52278305	52279258	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003744	chr11	+	junction_1	59839305	59851384	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	425	150	149	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003821	chr11	-	junction_1	62442400	62442951	?????	novel	novel	novel	-22	14	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003925	chr11	+	junction_1	69287187	69287345	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1280	460	422	398
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_1	69558444	69558520	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14742	4558	5846	4338
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_2	69558601	69558847	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	14535	4501	5690	4344
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_3	69558938	69559021	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14148	4341	5633	4174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_4	69559160	69559230	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12659	3816	5162	3681
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_5	69559371	69559469	?????	novel	novel	known	-4	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	255	0	255	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_6	69559580	69559903	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13227	4091	5280	3856
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_7	69560073	69560958	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13116	4086	5154	3876
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_8	69561099	69561440	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14548	4571	5725	4252
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_9	69561574	69561753	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13166	4110	5181	3875
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	junction_10	69561803	69563104	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9657	2977	3817	2863
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004126	chr11	+	junction_1	72098595	72099078	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1501	518	493	490
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004126	chr11	+	junction_2	72099161	72099555	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1458	489	495	474
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004126	chr11	+	junction_3	72099632	72100240	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1302	457	426	419
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004167	chr11	-	junction_1	74799670	74799821	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	97	35	28	34
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004167	chr11	-	junction_2	74800032	74800519	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	74	28	27	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004167	chr11	-	junction_3	74800595	74801026	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	66	19	25	22
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004167	chr11	-	junction_4	74801147	74801868	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	57	16	23	18
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004167	chr11	-	junction_5	74801973	74802094	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	62	22	23	17
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004167	chr11	-	junction_6	74802222	74803787	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	73	17	23	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004167	chr11	-	junction_7	74803960	74816444	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	39	12	13	14
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_1	75192230	75193493	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1486	507	535	444
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_2	75193581	75196933	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1678	548	587	543
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_3	75197042	75197940	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1696	552	605	539
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_4	75198118	75200958	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1627	537	614	476
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_5	75201092	75203125	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1576	547	547	482
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_6	75203275	75203518	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1507	473	562	472
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_7	75203659	75203803	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1623	507	623	493
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_8	75203997	75204126	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1586	508	593	485
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_9	75204196	75205638	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1501	471	576	454
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_10	75205742	75206930	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1546	542	536	468
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_11	75207064	75209237	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1717	589	620	508
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_12	75209358	75219498	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1534	510	548	476
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_13	75219588	75231115	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1920	633	676	611
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_14	75231225	75231853	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1946	648	676	622
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_15	75231933	75232969	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1997	676	715	606
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	junction_16	75233021	75239051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1885	608	700	577
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004217	chr11	-	junction_1	76104750	76108303	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	437	133	177	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	junction_1	77965001	77965105	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	198	73	66	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	junction_2	77965187	77965303	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	187	63	62	62
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	junction_3	77965454	77966216	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	211	74	73	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	junction_4	77966466	77966547	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	210	62	75	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	junction_5	77966661	77966815	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	230	74	81	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	junction_6	77966878	77967058	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	182	59	59	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	junction_7	77967106	77968642	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	187	60	60	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	junction_8	77968721	77969087	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	178	47	61	70
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	junction_9	77969216	77970902	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	211	64	74	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_1	82791877	82792382	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	238	78	90	70
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_2	82792454	82792534	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	269	91	89	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_3	82792695	82793820	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	219	63	80	76
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_4	82794024	82794915	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	193	72	67	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_5	82794963	82795065	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	266	86	99	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_6	82795202	82795617	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	219	69	85	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_7	82795811	82796103	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	269	84	108	77
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_8	82796202	82796332	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	202	69	60	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_9	82796410	82797250	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	264	88	94	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_10	82797331	82798378	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	270	80	103	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_11	82798597	82798917	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	314	93	105	116
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	junction_12	82799062	82799164	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	212	65	74	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004424	chr11	+	junction_1	86092379	86097778	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	24	12	5	7
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004490	chr11	+	junction_1	88858476	88861243	?????	novel	novel	known	873	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	959	349	274	336
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004490	chr11	+	junction_2	88861306	88861723	?????	novel	known	novel	0	-480	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	1054	369	381	304
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004490	chr11	+	junction_3	88861820	88863399	?????	novel	novel	novel	514	47	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004631	chr11	-	junction_1	95964045	95964348	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10703	3636	3416	3651
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004631	chr11	-	junction_2	95964501	95964787	?????	novel	novel	known	-27	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	81	23	25	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004631	chr11	-	junction_3	95964866	95965812	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9053	3053	2974	3026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004638	chr11	-	junction_1	95991229	95993473	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	419	139	167	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004638	chr11	-	junction_2	95993579	95994042	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	408	159	130	119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004638	chr11	-	junction_3	95994177	95994283	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	465	159	183	123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004638	chr11	-	junction_4	95994387	95998256	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	484	175	160	149
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004672	chr11	-	junction_1	96852836	96854186	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004672	chr11	-	junction_2	96854268	96868446	?????	novel	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	301	93	97	111
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004716	chr11	+	junction_1	97594317	97594613	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4063	1354	1372	1337
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004716	chr11	+	junction_2	97594799	97597623	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3867	1352	1273	1242
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004716	chr11	+	junction_3	97597732	97601927	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3997	1362	1341	1294
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004716	chr11	+	junction_4	97602106	97603262	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4334	1472	1450	1412
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004716	chr11	+	junction_5	97603358	97604218	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3872	1310	1301	1261
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004726	chr11	-	junction_1	97668991	97669090	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13439	4603	4434	4402
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004726	chr11	-	junction_2	97669205	97672159	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14161	4842	4708	4611
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004726	chr11	-	junction_3	97672257	97672631	?????	novel	novel	known	-32	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	613	203	220	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004726	chr11	-	junction_4	97672716	97673169	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11120	3784	3734	3602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004797	chr11	+	junction_1	100210987	100211491	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11207	3690	3776	3741
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004797	chr11	+	junction_2	100211876	100212142	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12768	4244	4343	4181
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004822	chr11	-	junction_1	100320776	100321902	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	485	174	174	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004822	chr11	-	junction_2	100322104	100323743	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	495	171	176	148
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004822	chr11	-	junction_3	100323903	100325520	?????	novel	novel	known	-4	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004822	chr11	-	junction_4	100325611	100326980	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	616	233	197	186
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004822	chr11	-	junction_5	100327067	100330865	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	530	204	172	154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004822	chr11	-	junction_6	100330913	100331010	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	530	217	160	153
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004822	chr11	-	junction_7	100331081	100331654	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	486	175	160	151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_1	101297851	101298956	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	603	199	211	193
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_2	101299049	101300478	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_3	101300534	101300939	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	563	197	187	179
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_4	101301032	101301179	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	644	220	215	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_5	101301247	101301586	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	611	216	225	170
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_6	101301718	101301908	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	507	169	165	173
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_7	101302026	101302119	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	606	192	191	223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_8	101302277	101302765	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	542	173	175	194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_9	101302824	101304762	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	582	193	188	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_10	101304923	101307928	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	553	173	196	184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	junction_11	101308061	101308175	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	448	139	167	142
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_1	103714086	103714564	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	334	106	124	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_2	103714621	103718036	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	317	98	107	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_3	103718151	103719257	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	323	116	104	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_4	103719393	103737199	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	319	104	114	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_5	103737280	103738819	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	322	100	119	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_6	103738887	103749720	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	300	91	115	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_7	103749855	103752718	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	315	120	114	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_8	103752876	103754064	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	291	113	91	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_9	103754161	103762984	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	281	103	90	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_10	103763173	103763416	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	326	97	121	108
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_11	103763492	103763970	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	291	95	99	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_12	103764137	103773567	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	282	96	100	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_13	103773768	103801268	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	282	93	102	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_14	103801425	103804141	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	97	95	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_15	103804218	103804626	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	290	109	99	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_16	103804735	103807331	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	301	121	86	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_17	103807499	103816973	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	336	112	115	109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_18	103817014	103819569	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	355	109	128	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_19	103819670	103821555	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	339	116	110	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	junction_20	103821642	103844795	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	316	109	106	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_1	106147041	106147673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2464	851	795	818
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_2	106147746	106151678	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2806	951	920	935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_3	106151749	106152010	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2411	811	755	845
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_4	106152109	106152248	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2545	856	841	848
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_5	106152537	106152731	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2807	974	906	927
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_6	106152859	106152943	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2261	767	753	741
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_7	106153135	106153229	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2779	962	918	899
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_8	106153333	106153406	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_9	106153518	106153622	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2540	890	819	831
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	junction_10	106153710	106153834	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2581	886	839	856
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_1	106673083	106673294	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4489	1500	1557	1432
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_2	106673520	106674784	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4169	1398	1408	1363
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_3	106674845	106674926	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4151	1362	1432	1357
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_4	106674989	106675239	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4171	1410	1464	1297
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_5	106675351	106675705	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4106	1324	1429	1353
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_6	106675879	106675961	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4439	1494	1534	1411
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_7	106676123	106676220	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4137	1368	1435	1334
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_8	106676363	106676892	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3830	1273	1349	1208
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_9	106676959	106677051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4252	1380	1502	1370
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_10	106677186	106677273	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4158	1368	1471	1319
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_11	106677371	106677734	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4223	1436	1508	1279
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	junction_12	106677901	106679098	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4144	1384	1518	1242
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005116	chr11	+	junction_1	114559512	114559606	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1304	424	432	448
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005116	chr11	+	junction_2	114559641	114559731	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19248	6453	6534	6261
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005116	chr11	+	junction_3	114559793	114562559	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20156	6775	6854	6527
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005116	chr11	+	junction_4	114562683	114563090	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12129	3977	4182	3970
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005125	chr11	+	junction_1	115054778	115067176	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	130	40	45	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005125	chr11	+	junction_2	115067339	115068049	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	169	59	61	49
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005125	chr11	+	junction_3	115068204	115069875	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	154	47	62	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005125	chr11	+	junction_4	115069917	115070832	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	152	53	56	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005125	chr11	+	junction_5	115070923	115071140	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	145	46	61	38
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005131	chr11	+	junction_1	115294787	115297376	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1064	349	349	366
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005131	chr11	+	junction_2	115297414	115300305	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1069	348	349	372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005131	chr11	+	junction_3	115300366	115300885	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	944	300	309	335
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005131	chr11	+	junction_4	115300969	115301057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1001	364	311	326
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005131	chr11	+	junction_5	115301228	115301463	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1124	381	333	410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005142	chr11	-	junction_1	115306706	115306840	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2984	983	1025	976
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005142	chr11	-	junction_2	115306904	115307678	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3240	1127	1129	984
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005142	chr11	-	junction_3	115307751	115308664	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3647	1260	1286	1101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005142	chr11	-	junction_4	115308753	115309207	?????	novel	novel	novel	-9	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005147	chr11	-	junction_1	115306706	115306840	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2984	983	1025	976
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005147	chr11	-	junction_2	115306904	115307678	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3240	1127	1129	984
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005147	chr11	-	junction_3	115307751	115308664	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3647	1260	1286	1101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005147	chr11	-	junction_4	115308762	115309211	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2962	993	1026	943
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005147	chr11	-	junction_5	115309343	115310017	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	116	47	33	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005191	chr11	-	junction_1	115499440	115499886	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	339	109	127	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005191	chr11	-	junction_2	115499980	115500105	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	302	98	101	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005191	chr11	-	junction_3	115500262	115500364	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	406	150	135	121
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005191	chr11	-	junction_4	115500475	115502728	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	382	142	121	119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005191	chr11	-	junction_5	115502861	115503610	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	324	117	98	109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005225	chr11	-	junction_1	115970423	115970533	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	961	332	330	299
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005225	chr11	-	junction_2	115970611	115971047	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1079	360	390	329
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005225	chr11	-	junction_3	115971171	115971371	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1043	350	378	315
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005225	chr11	-	junction_4	115971507	115972057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1083	358	386	339
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005225	chr11	-	junction_5	115972151	115973101	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1036	339	368	329
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005225	chr11	-	junction_6	115973238	115974664	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1247	432	429	386
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005225	chr11	-	junction_7	115974774	115977692	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1218	406	434	378
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005235	chr11	+	junction_1	116089810	116095670	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	129	44	40	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005235	chr11	+	junction_2	116095806	116096436	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	129	44	45	40
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005235	chr11	+	junction_3	116096595	116105664	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	95	34	25	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005276	chr11	-	junction_1	116741788	116742846	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1858	616	684	558
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005276	chr11	-	junction_2	116743158	116743393	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1775	580	667	528
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005294	chr11	+	junction_1	117242447	117242974	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	685	223	262	200
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005294	chr11	+	junction_2	117243104	117243432	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	653	216	240	197
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005294	chr11	+	junction_3	117243515	117243913	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	621	212	221	188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005294	chr11	+	junction_4	117244052	117245635	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	623	195	250	178
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005294	chr11	+	junction_5	117245754	117247160	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	666	201	262	203
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005294	chr11	+	junction_6	117247257	117247438	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	625	219	218	188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005294	chr11	+	junction_7	117247536	117250244	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	638	229	211	198
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005294	chr11	+	junction_8	117250297	117251248	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	610	226	215	169
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005336	chr11	-	junction_1	118973128	118973342	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	70	19	22	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005336	chr11	-	junction_2	118973410	118975388	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	64	19	19	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005336	chr11	-	junction_3	118975455	118976582	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	62	20	20	22
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005336	chr11	-	junction_4	118976627	118976774	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	80	26	29	25
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005346	chr11	+	junction_1	119382286	119382610	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23	8	9	6
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005346	chr11	+	junction_2	119382783	119390352	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	42	11	17	14
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005346	chr11	+	junction_3	119390488	119390671	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	40	12	15	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005346	chr11	+	junction_4	119390712	119391416	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	37	16	10	11
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005346	chr11	+	junction_5	119391530	119393118	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	48	14	18	16
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005346	chr11	+	junction_6	119393188	119393524	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	47	13	22	12
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005346	chr11	+	junction_7	119393654	119395916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	43	13	17	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005346	chr11	+	junction_8	119395994	119398027	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	40	14	16	10
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_1	17595170	17597096	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1363	455	481	427
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_2	17597195	17597283	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1371	475	501	395
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_3	17597402	17597633	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1395	449	515	431
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_4	17597808	17597950	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1402	485	510	407
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_5	17598124	17598309	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1384	458	516	410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_6	17598445	17598545	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1579	502	569	508
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_7	17598628	17598791	?????	novel	known	novel	0	-4	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_8	17598872	17599424	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1504	510	503	491
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_9	17599588	17599668	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1448	483	508	457
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_10	17599782	17599863	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1470	465	521	484
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	junction_11	17600079	17600607	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	389	113	133	143
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_1	17595170	17597096	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1363	455	481	427
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_2	17597193	17597283	?????	novel	novel	known	-2	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_3	17597402	17597633	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1395	449	515	431
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_4	17597808	17597950	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1402	485	510	407
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_5	17598124	17598309	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1384	458	516	410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_6	17598445	17598545	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1579	502	569	508
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_7	17598628	17598787	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1436	453	520	463
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_8	17598872	17599424	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1504	510	503	491
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_9	17599588	17599668	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1448	483	508	457
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_10	17599782	17599863	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1470	465	521	484
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	junction_11	17600079	17600607	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	389	113	133	143
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005608	chr12	+	junction_1	17741048	17836147	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	71	28	21	22
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005608	chr12	+	junction_2	17836550	17837545	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	90	33	24	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005608	chr12	+	junction_3	17837652	17841107	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	73	25	24	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	junction_1	24758445	24758558	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5890	1978	2056	1856
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	junction_2	24758634	24758937	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6189	2047	2169	1973
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	junction_3	24759085	24759323	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6419	2197	2185	2037
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	junction_4	24759441	24760355	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6029	2029	2098	1902
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	junction_5	24760490	24761445	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6238	2100	2133	2005
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	junction_6	24761541	24761667	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6455	2183	2216	2056
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	junction_7	24761802	24762659	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6058	2034	2080	1944
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	junction_8	24762765	24762859	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7144	2476	2418	2250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	junction_9	24762974	24763078	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5416	1827	1867	1722
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005680	chr12	-	junction_1	28681193	28681622	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12310	4059	4178	4073
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005680	chr12	-	junction_2	28681774	28683766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16613	5568	5554	5491
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005680	chr12	-	junction_3	28683830	28684207	?????	novel	novel	known	-2	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	1	0	1	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005680	chr12	-	junction_4	28684352	28685414	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10789	3633	3598	3558
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005680	chr12	-	junction_5	28685487	28685578	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15968	5320	5338	5310
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005680	chr12	-	junction_6	28685663	28685854	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	12102	4037	4129	3936
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005687	chr12	+	junction_1	28699816	28702023	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	255	84	97	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005687	chr12	+	junction_2	28702140	28703061	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	224	72	81	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005687	chr12	+	junction_3	28703224	28705583	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	155	55	57	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005687	chr12	+	junction_4	28705684	28707270	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	247	84	71	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005687	chr12	+	junction_5	28707326	28707631	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	234	71	67	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005687	chr12	+	junction_6	28707717	28708169	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	273	97	72	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005687	chr12	+	junction_7	28708295	28708991	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	247	90	78	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005743	chr12	-	junction_1	36065772	36070488	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	855	288	311	256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005743	chr12	-	junction_2	36070603	36071799	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	830	295	296	239
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005743	chr12	-	junction_3	36071914	36072751	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	804	263	277	264
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005743	chr12	-	junction_4	36072833	36073903	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	824	284	272	268
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005743	chr12	-	junction_5	36074072	36092249	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	984	327	319	338
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_1	36142309	36142965	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1153	399	397	357
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_2	36143089	36154260	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1107	410	372	325
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_3	36154400	36157494	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1231	432	436	363
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_4	36157642	36159703	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1036	354	366	316
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_5	36159875	36163966	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1040	335	367	338
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_6	36164077	36168985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	989	343	317	329
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_7	36169122	36170717	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	988	340	347	301
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_8	36170784	36173933	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	980	306	360	314
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_9	36174038	36179990	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	931	304	335	292
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_10	36180168	36184889	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1068	359	393	316
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	junction_11	36184955	36206666	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1044	330	350	364
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005753	chr12	-	junction_1	40086833	40087261	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	67	30	21	16
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005794	chr12	-	junction_1	54720636	54725294	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	401	142	137	122
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005794	chr12	-	junction_2	54725409	54732644	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	381	151	111	119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005794	chr12	-	junction_3	54732757	54738784	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	353	136	106	111
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005794	chr12	-	junction_4	54738881	54739559	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	393	161	112	120
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005794	chr12	-	junction_5	54739742	54742495	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	445	162	147	136
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005837	chr12	-	junction_1	55536755	55537190	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	259	89	84	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005837	chr12	-	junction_2	55537452	55537555	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	237	81	83	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005837	chr12	-	junction_3	55537645	55537904	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	207	69	70	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005837	chr12	-	junction_4	55538116	55538454	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	223	67	79	77
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005837	chr12	-	junction_5	55538564	55539084	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	201	66	67	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005880	chr12	+	junction_1	65122952	65123815	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	163	49	63	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005880	chr12	+	junction_2	65123989	65129805	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	178	68	63	47
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005880	chr12	+	junction_3	65129884	65134156	?????	novel	known	novel	0	775	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	44	21	11	12
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005961	chr12	+	junction_1	72132958	72136088	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	493	180	152	161
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005961	chr12	+	junction_2	72136181	72136729	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	672	226	225	221
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005961	chr12	+	junction_3	72136885	72140710	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	527	177	165	185
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005961	chr12	+	junction_4	72140918	72141459	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	737	237	237	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005961	chr12	+	junction_5	72141642	72146820	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	672	229	209	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005961	chr12	+	junction_6	72146898	72147383	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	575	200	178	197
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005964	chr12	-	junction_1	72259352	72263544	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	56	18	22	16
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005964	chr12	-	junction_2	72263604	72263688	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	47	14	18	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005964	chr12	-	junction_3	72263736	72264192	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	52	16	20	16
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005964	chr12	-	junction_4	72264263	72266030	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	56	21	20	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005964	chr12	-	junction_5	72266170	72270105	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	61	19	20	22
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005964	chr12	-	junction_6	72270314	72283302	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	55	21	14	20
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006050	chr12	+	junction_1	80992447	80993349	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1278	454	431	393
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006050	chr12	+	junction_2	80993495	80994084	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1903	662	631	610
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006050	chr12	+	junction_3	80994156	80994269	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1874	638	632	604
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006050	chr12	+	junction_4	80994369	80994569	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2006	660	688	658
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006050	chr12	+	junction_5	80994640	80995868	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1780	590	594	596
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006050	chr12	+	junction_6	80995943	80996267	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2012	670	680	662
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006050	chr12	+	junction_7	80996379	80996493	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1859	563	662	634
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006117	chr12	-	junction_1	84803987	84807493	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3130	1054	1078	998
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006117	chr12	-	junction_2	84807667	84812050	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2887	964	969	954
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006117	chr12	-	junction_3	84812159	84819559	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2850	931	991	928
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006143	chr12	-	junction_1	85319602	85326764	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	443	145	154	144
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006143	chr12	-	junction_2	85326857	85327083	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	386	132	136	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006195	chr12	-	junction_1	87476041	87478169	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	329	120	94	115
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006195	chr12	-	junction_2	87478364	87480888	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	174	70	49	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006195	chr12	-	junction_3	87480980	87485166	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	283	112	96	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006195	chr12	-	junction_4	87485330	87487075	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	281	87	93	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006195	chr12	-	junction_5	87487185	87490411	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	188	69	58	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006272	chr12	-	junction_1	103374737	103376186	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	851	295	282	274
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006272	chr12	-	junction_2	103376317	103377387	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	857	262	315	280
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006272	chr12	-	junction_3	103377577	103382454	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	832	283	293	256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006272	chr12	-	junction_4	103382531	103383536	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	896	304	311	281
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006272	chr12	-	junction_5	103384053	103384322	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	805	267	282	256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006272	chr12	-	junction_6	103384477	103385220	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	852	290	265	297
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006272	chr12	-	junction_7	103385743	103390130	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	814	275	279	260
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006272	chr12	-	junction_8	103390857	103392037	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	750	242	262	246
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006278	chr12	+	junction_1	104343932	104355322	?????	novel	novel	known	-9551	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	71	26	26	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006278	chr12	+	junction_2	104355972	104357714	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	63	29	21	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006278	chr12	+	junction_3	104357989	104358900	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	91	35	30	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006278	chr12	+	junction_4	104359052	104359991	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	91	29	29	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006289	chr12	-	junction_1	105183961	105184481	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1349	445	449	455
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006289	chr12	-	junction_2	105184552	105184917	?????	known	known	known	0	0	FALSE	GCAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006289	chr12	-	junction_3	105185089	105188791	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1947	660	660	627
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_1	108521473	108614573	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	169	50	62	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_2	108614743	108619180	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	196	65	70	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_3	108619359	108639547	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	177	59	60	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_4	108639612	108640665	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	189	55	72	62
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_5	108640725	108641655	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	203	69	72	62
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_6	108641886	108642360	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	149	45	60	44
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_7	108642483	108646087	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	172	60	53	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_8	108646149	108647749	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	151	45	54	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_9	108647814	108649453	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	169	53	66	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_10	108649521	108649606	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	180	60	68	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_11	108649670	108652308	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	191	57	73	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_12	108652376	108652666	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	205	67	72	66
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	junction_13	108652725	108654287	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	199	63	73	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006346	chr12	+	junction_1	109617534	109618292	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	671	218	229	224
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006346	chr12	+	junction_2	109618373	109620719	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	603	202	202	199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006346	chr12	+	junction_3	109620867	109622282	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	633	206	225	202
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006346	chr12	+	junction_4	109622369	109623221	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	616	192	223	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006346	chr12	+	junction_5	109623275	109624486	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	549	171	207	171
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006346	chr12	+	junction_6	109624556	109626156	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	633	230	189	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006346	chr12	+	junction_7	109626242	109627179	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	652	211	230	211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_1	110658084	110658547	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16426	5471	5941	5014
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_2	110658882	110659037	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13179	4269	4759	4151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_3	110659307	110659453	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14594	4897	5319	4378
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_4	110659602	110659745	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12856	4252	4591	4013
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_5	110659937	110660144	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11833	3909	4359	3565
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_6	110660311	110660456	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12009	3896	4383	3730
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_7	110660772	110661004	?????	novel	novel	known	-6	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_8	110661139	110661485	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12806	4099	4658	4049
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_9	110661853	110661952	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11583	3801	4287	3495
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	junction_10	110662115	110662685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11919	3769	4272	3878
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_1	110658084	110658547	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16426	5471	5941	5014
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_2	110658882	110659037	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13179	4269	4759	4151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_3	110659307	110659453	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14594	4897	5319	4378
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_4	110659602	110659745	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12856	4252	4591	4013
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_5	110659937	110660140	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_6	110660311	110660456	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12009	3896	4383	3730
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_7	110660778	110661004	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11114	3590	3979	3545
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_8	110661139	110661485	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12806	4099	4658	4049
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_9	110661853	110661952	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11583	3801	4287	3495
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	junction_10	110662115	110662685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11919	3769	4272	3878
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_1	110658084	110658547	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16426	5471	5941	5014
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_2	110658882	110659037	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13179	4269	4759	4151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_3	110659307	110659453	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14594	4897	5319	4378
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_4	110659602	110659738	?????	novel	known	novel	0	7	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_5	110659937	110660144	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11833	3909	4359	3565
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_6	110660311	110660456	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12009	3896	4383	3730
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_7	110660778	110661004	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11114	3590	3979	3545
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_8	110661139	110661485	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12806	4099	4658	4049
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_9	110661853	110661952	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11583	3801	4287	3495
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	junction_10	110662115	110662685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11919	3769	4272	3878
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006440	chr12	-	junction_1	111636176	111636258	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8476	2793	2896	2787
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006440	chr12	-	junction_2	111636449	111636595	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7560	2459	2678	2423
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006440	chr12	-	junction_3	111636720	111637306	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7640	2607	2624	2409
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006440	chr12	-	junction_4	111638014	111638199	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7551	2489	2632	2430
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006440	chr12	-	junction_5	111638408	111638663	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7921	2546	2846	2529
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006439	chr12	-	junction_1	111636176	111636258	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8476	2793	2896	2787
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006439	chr12	-	junction_2	111636449	111636595	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7560	2459	2678	2423
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006439	chr12	-	junction_3	111636720	111637306	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7640	2607	2624	2409
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006439	chr12	-	junction_4	111637479	111637648	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7554	2424	2723	2407
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006439	chr12	-	junction_5	111638014	111638199	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7551	2489	2632	2430
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006439	chr12	-	junction_6	111638408	111638663	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7921	2546	2846	2529
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006467	chr12	+	junction_1	111927995	111929666	?????	novel	novel	novel	22	-3	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006469	chr12	+	junction_1	111928005	111929666	?????	novel	novel	novel	32	-3	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006472	chr12	+	junction_1	111928008	111929666	?????	novel	novel	novel	35	-3	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006465	chr12	+	junction_1	111927992	111929666	?????	novel	novel	novel	19	-3	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006652	chr13	-	junction_1	34102426	34102723	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	380	126	122	132
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006652	chr13	-	junction_2	34102880	34106908	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	345	115	128	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006652	chr13	-	junction_3	34107052	34109294	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	511	187	198	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006652	chr13	-	junction_4	34109413	34114007	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	344	129	99	116
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006652	chr13	-	junction_5	34114161	34115454	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	378	116	128	134
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006652	chr13	-	junction_6	34115630	34119551	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	31	9	9	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006652	chr13	-	junction_7	34119778	34119904	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17	7	6	4
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006692	chr13	-	junction_1	36163891	36276788	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	325	123	107	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006692	chr13	-	junction_2	36276910	36301057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	344	140	104	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_1	53488014	53489376	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	189	64	69	56
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_2	53489451	53491643	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	190	65	70	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_3	53491762	53496207	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	154	46	53	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_4	53496263	53497163	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	162	48	57	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_5	53497261	53497814	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	158	55	55	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_6	53497911	53498836	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	172	49	69	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_7	53498945	53505636	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	156	57	55	44
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_8	53505727	53508186	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	151	50	53	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_9	53508317	53512796	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	150	49	60	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_10	53512930	53521347	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	159	53	54	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_11	53521421	53521901	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	146	45	53	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_12	53521996	53527364	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	169	46	61	62
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_13	53527460	53527997	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	172	55	65	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	junction_14	53528106	53531328	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	159	54	66	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_1	54225952	54239467	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	779	256	263	260
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_2	54239643	54242907	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	954	318	316	320
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_3	54243079	54245241	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	950	326	279	345
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_4	54245341	54246391	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	964	306	335	323
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_5	54246468	54247019	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	920	338	313	269
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_6	54247106	54247872	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	895	291	308	296
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_7	54248001	54250749	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	951	307	316	328
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_8	54250800	54258820	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	954	318	321	315
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_9	54258871	54259766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	858	308	271	279
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	junction_10	54259815	54260525	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	938	324	293	321
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_1	55678545	55678993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	730	258	242	230
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_2	55679105	55679190	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	798	284	254	260
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_3	55679263	55679347	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	744	266	254	224
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_4	55679498	55679644	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	776	283	250	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_5	55679742	55679850	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	695	245	214	236
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_6	55679923	55680160	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	708	247	246	215
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_7	55680293	55680811	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	697	240	248	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_8	55680975	55681764	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	729	252	234	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_9	55681902	55681975	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	642	217	197	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_10	55682130	55682228	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	685	234	230	221
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_11	55682302	55683101	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	653	211	229	213
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_12	55683239	55683371	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	668	227	207	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_13	55683433	55683542	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	707	235	238	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_14	55683618	55683698	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	661	223	235	203
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_15	55683859	55684108	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	749	239	246	264
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	junction_16	55684220	55684293	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	646	214	206	226
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006921	chr13	-	junction_1	56222206	56230932	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1103	359	348	396
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006921	chr13	-	junction_2	56231108	56232008	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1322	441	457	424
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006921	chr13	-	junction_3	56232099	56237570	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1173	373	371	429
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006921	chr13	-	junction_4	56237671	56243936	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1318	442	427	449
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006921	chr13	-	junction_5	56244045	56252114	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	847	294	258	295
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006921	chr13	-	junction_6	56252313	56252701	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1156	400	386	370
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006921	chr13	-	junction_7	56252809	56276089	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1285	449	402	434
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006921	chr13	-	junction_8	56276295	56283158	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1233	458	386	389
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006988	chr13	+	junction_1	62245653	62254561	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	481	171	157	153
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006988	chr13	+	junction_2	62254689	62254881	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	547	213	181	153
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006988	chr13	+	junction_3	62254943	62259162	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	498	193	168	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007026	chr13	-	junction_1	64512015	64513018	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1299	409	493	397
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007026	chr13	-	junction_2	64513137	64514292	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1379	465	507	407
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007026	chr13	-	junction_3	64514456	64514681	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1187	376	415	396
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007026	chr13	-	junction_4	64514907	64515673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1313	469	437	407
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007026	chr13	-	junction_5	64515821	64515929	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1222	396	413	413
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007026	chr13	-	junction_6	64516053	64516837	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007026	chr13	-	junction_7	64516979	64518049	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1435	470	509	456
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007035	chr13	-	junction_1	65639775	65644415	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	408	152	124	132
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007035	chr13	-	junction_2	65644605	65651440	?????	novel	novel	novel	2304	-7025	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007058	chr13	-	junction_1	66430404	66431569	?????	novel	novel	novel	-3	1	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	78	25	26	27
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007058	chr13	-	junction_2	66431631	66431830	?????	novel	novel	novel	-1	2	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	55	12	25	18
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007058	chr13	-	junction_3	66431958	66439173	?????	novel	novel	novel	326	-7341	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	70	18	25	27
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007067	chr13	-	junction_1	66578071	66581478	?????	novel	novel	known	-2220	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	24	9	9	6
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007067	chr13	-	junction_2	66581540	66581739	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	147	29	56	62
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007067	chr13	-	junction_3	66581867	66589080	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	193	61	61	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007086	chr13	-	junction_1	66941596	66942701	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	149	43	46	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007086	chr13	-	junction_2	66942763	66942962	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	163	51	62	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007086	chr13	-	junction_3	66943090	66950528	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	157	57	50	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007289	chr13	-	junction_1	98446710	98447488	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7051	2326	2437	2288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007289	chr13	-	junction_2	98447546	98449599	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5972	2018	2052	1902
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007289	chr13	-	junction_3	98449802	98450146	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6754	2220	2352	2182
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007289	chr13	-	junction_4	98450261	98452737	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6609	2194	2324	2091
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007289	chr13	-	junction_5	98452807	98453373	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6398	2104	2233	2061
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007314	chr13	+	junction_1	100261474	100263094	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	813	284	263	266
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007314	chr13	+	junction_2	100263167	100263377	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	803	262	270	271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007314	chr13	+	junction_3	100263498	100264312	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	693	234	234	225
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007314	chr13	+	junction_4	100264514	100264722	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	670	257	217	196
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007314	chr13	+	junction_5	100264870	100267587	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	580	198	182	200
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007314	chr13	+	junction_6	100267684	100268863	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	544	179	172	193
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007314	chr13	+	junction_7	100268975	100272196	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	816	283	292	241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007314	chr13	+	junction_8	100272248	100273888	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	712	235	250	227
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007435	chr13	-	junction_1	114425403	114444352	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1600	552	529	519
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007435	chr13	-	junction_2	114444427	114453392	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1725	617	578	530
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007435	chr13	-	junction_3	114453566	114487983	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1521	501	500	520
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007435	chr13	-	junction_4	114488063	114524494	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1521	514	500	507
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007445	chr13	+	junction_1	114954860	114955871	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	152	39	51	62
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007445	chr13	+	junction_2	114955994	114957337	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	133	41	45	47
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007445	chr13	+	junction_3	114957483	114961102	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	151	53	46	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007445	chr13	+	junction_4	114961231	114961746	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	159	56	49	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007445	chr13	+	junction_5	114961898	114962693	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	158	55	49	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007445	chr13	+	junction_6	114962818	114964824	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	190	72	56	62
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	junction_1	119472943	119474911	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	237	88	84	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	junction_2	119475028	119476362	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	214	75	78	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	junction_3	119476482	119491194	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	237	82	77	78
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	junction_4	119491277	119494038	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	211	74	72	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	junction_5	119494199	119502862	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	215	88	68	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	junction_6	119503043	119505011	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	224	91	60	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	junction_7	119505173	119506447	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	207	83	63	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	junction_8	119506682	119508931	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	209	66	74	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	junction_9	119509128	119511164	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	169	70	49	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007479	chr14	+	junction_1	4198738	4199235	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8735	2836	3084	2815
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007479	chr14	+	junction_2	4199418	4199652	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10327	3478	3599	3250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007479	chr14	+	junction_3	4199790	4200379	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16172	5482	5445	5245
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007492	chr14	+	junction_1	4198874	4199235	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1636	537	571	528
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007492	chr14	+	junction_2	4199418	4199652	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10327	3478	3599	3250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007492	chr14	+	junction_3	4199790	4200382	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007498	chr14	+	junction_1	4199418	4199652	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10327	3478	3599	3250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007498	chr14	+	junction_2	4199790	4200384	?????	novel	known	novel	0	-5	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007512	chr14	+	junction_1	8508579	8515106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	370	113	131	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007512	chr14	+	junction_2	8515225	8516224	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	744	246	235	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007512	chr14	+	junction_3	8516353	8516600	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	658	196	239	223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007512	chr14	+	junction_4	8516688	8518499	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	741	233	259	249
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007512	chr14	+	junction_5	8518558	8519397	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	621	207	204	210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007512	chr14	+	junction_6	8519465	8519561	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	689	242	231	216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007512	chr14	+	junction_7	8519632	8520435	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	683	220	247	216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007521	chr14	+	junction_1	8512210	8515106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	34	10	14	10
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007521	chr14	+	junction_2	8515225	8516224	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	744	246	235	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007521	chr14	+	junction_3	8516353	8516600	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	658	196	239	223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007521	chr14	+	junction_4	8516688	8518499	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	741	233	259	249
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007521	chr14	+	junction_5	8518558	8519397	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	621	207	204	210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007521	chr14	+	junction_6	8519465	8519561	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	689	242	231	216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007521	chr14	+	junction_7	8519632	8520435	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	683	220	247	216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_1	19801634	19802308	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1576	527	580	469
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_2	19802618	19813733	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1453	471	538	444
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_3	19813967	19818277	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1333	443	459	431
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_4	19819006	19828063	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1469	491	531	447
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_5	19828214	19828805	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1461	504	509	448
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_6	19829052	19829604	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1643	542	584	517
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_7	19829806	19831202	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1639	547	588	504
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_8	19831434	19839738	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1482	498	531	453
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_9	19839883	19840345	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1670	574	603	493
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_10	19840475	19841575	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1369	453	458	458
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_11	19841720	19847231	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1512	470	591	451
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_12	19847352	19848464	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1573	532	529	512
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_13	19848714	19852405	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1639	576	584	479
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_14	19852628	19853116	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1309	430	470	409
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_15	19853287	19855365	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1692	559	597	536
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_16	19855496	19855910	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1696	532	625	539
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_17	19856083	19857994	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1560	518	569	473
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_18	19858153	19860047	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1746	624	622	500
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_19	19860172	19861021	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1741	574	629	538
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	junction_20	19861135	19861253	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1731	580	612	539
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_1	30734592	30734679	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1081	332	384	365
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_2	30734747	30735123	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	974	306	342	326
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_3	30735282	30735385	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	917	274	347	296
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_4	30735523	30735609	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	819	276	274	269
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_5	30735753	30736009	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	862	296	298	268
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_6	30736185	30736546	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	945	331	329	285
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_7	30736635	30736862	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	796	266	259	271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_8	30736984	30737231	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	793	264	282	247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_9	30737342	30738278	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	902	277	353	272
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_10	30738412	30738783	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	775	260	283	232
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_11	30738865	30739013	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	859	281	299	279
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_12	30739125	30739232	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	960	305	340	315
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_13	30739371	30739764	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	957	304	358	295
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	junction_14	30739824	30740885	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	853	290	302	261
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007762	chr14	-	junction_1	31805204	31807366	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	69	24	20	25
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_1	51045445	51047530	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	835	284	282	269
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_2	51047672	51047956	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	749	268	239	242
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_3	51048028	51049232	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	871	290	282	299
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_4	51049284	51052326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	854	287	275	292
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_5	51052424	51052808	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	692	234	220	238
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_6	51052885	51053653	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	779	271	251	257
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_7	51053757	51054429	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	777	264	232	281
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_8	51054581	51054788	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	708	267	202	239
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_9	51054928	51056666	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	799	282	264	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_10	51056731	51056810	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	816	291	244	281
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_11	51056946	51057117	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	870	282	280	308
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_12	51057246	51057398	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	805	256	261	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_13	51057499	51057934	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	766	244	256	266
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_14	51058034	51058251	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	800	288	226	286
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	junction_15	51058377	51058491	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	843	278	277	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007952	chr14	+	junction_1	52517114	52517277	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	580	190	200	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007952	chr14	+	junction_2	52517347	52523116	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	568	184	205	179
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007952	chr14	+	junction_3	52523360	52524185	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	502	163	179	160
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007952	chr14	+	junction_4	52524447	52524757	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	458	152	159	147
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007952	chr14	+	junction_5	52524989	52528217	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	506	182	150	174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007952	chr14	+	junction_6	52528299	52528931	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	561	190	178	193
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007952	chr14	+	junction_7	52529676	52529976	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	558	187	198	173
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007952	chr14	+	junction_8	52530141	52530657	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	555	178	204	173
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_1	55816071	55817051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	87	102	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_2	55817085	55817227	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	301	92	106	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_3	55817291	55817387	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	275	77	101	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_4	55817499	55817570	?????	known	known	known	0	0	FALSE	GCAG	canonical	FALSE	NA	NA	NA	1	117	0	117	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_5	55817617	55817786	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	234	67	95	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_6	55817885	55818051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	300	103	104	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_7	55818121	55818200	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	294	106	98	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_8	55818269	55818374	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	280	106	92	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_9	55818430	55818508	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	285	88	106	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	junction_10	55818596	55818757	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	313	91	118	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008052	chr14	-	junction_1	55896532	55896656	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	490	140	184	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008052	chr14	-	junction_2	55896743	55896826	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	443	144	162	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008052	chr14	-	junction_3	55896935	55897444	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	428	134	154	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008052	chr14	-	junction_4	55897556	55897624	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	347	110	112	125
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008052	chr14	-	junction_5	55897686	55897794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	479	145	158	176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008083	chr14	-	junction_1	56135470	56135699	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	198	69	63	66
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008083	chr14	-	junction_2	56135844	56136640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	191	70	62	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008083	chr14	-	junction_3	56136763	56137103	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	161	63	49	49
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008083	chr14	-	junction_4	56137187	56137270	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	170	53	60	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008114	chr14	+	junction_1	58063780	58063968	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008252	chr14	-	junction_1	70376397	70376618	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	172	48	67	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008297	chr14	+	junction_1	76082897	76083056	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5440	1839	1764	1837
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008297	chr14	+	junction_2	76083131	76083642	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5160	1728	1646	1786
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008297	chr14	+	junction_3	76083810	76084133	?????	novel	novel	known	-24	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008297	chr14	+	junction_4	76084240	76084683	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5475	1851	1816	1808
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008297	chr14	+	junction_5	76084801	76085538	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5676	1832	1969	1875
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008315	chr14	+	junction_1	76742282	76742688	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2255	719	822	714
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008315	chr14	+	junction_2	76742738	76743856	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2335	768	805	762
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008495	chr15	-	junction_1	11984384	11986541	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7728	2554	2450	2724
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008495	chr15	-	junction_2	11986651	11991044	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8159	2622	2654	2883
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008495	chr15	-	junction_3	11991168	11993874	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8333	2733	2716	2884
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008495	chr15	-	junction_4	11993948	11996032	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	182	62	50	70
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008513	chr15	-	junction_1	22704588	22704680	?????	novel	novel	novel	155209	232256	FALSE	GTAG	canonical	TRUE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008521	chr15	-	junction_1	22704579	22704669	?????	novel	novel	novel	155200	232267	FALSE	GTAG	canonical	TRUE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008581	chr15	+	junction_1	36174228	36175132	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	810	279	253	278
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008581	chr15	+	junction_2	36175203	36175529	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	841	319	245	277
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008581	chr15	+	junction_3	36175623	36176899	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	328	156	1	171
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008588	chr15	-	junction_1	36479620	36484126	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	290	94	106	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008588	chr15	-	junction_2	36484286	36485940	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	300	101	104	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008588	chr15	-	junction_3	36486274	36496022	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	350	127	111	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008588	chr15	-	junction_4	36496140	36496872	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	250	89	79	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_1	36596344	36596806	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6318	1986	2306	2026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_2	36596900	36597207	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6868	2186	2576	2106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_3	36597339	36597696	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_4	36597786	36598216	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6057	1878	2262	1917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_5	36598372	36598445	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6321	2057	2305	1959
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_6	36598557	36599195	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5838	1863	2136	1839
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_7	36599287	36599448	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6058	1945	2294	1819
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_8	36599722	36600836	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5404	1645	2001	1758
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_9	36600933	36601113	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6055	1923	2146	1986
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_10	36601252	36601558	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5069	1623	1790	1656
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_11	36601654	36603089	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5273	1629	1985	1659
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_12	36603230	36605685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5152	1626	1892	1634
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_13	36605802	36605987	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5117	1599	1912	1606
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	junction_14	36606182	36608557	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5222	1687	1881	1654
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_1	36596344	36596806	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6318	1986	2306	2026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_2	36596900	36597207	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6868	2186	2576	2106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_3	36597339	36597700	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5911	1859	2144	1908
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_4	36597786	36598216	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6057	1878	2262	1917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_5	36598372	36598445	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6321	2057	2305	1959
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_6	36598557	36599195	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5838	1863	2136	1839
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_7	36599281	36599448	?????	novel	novel	known	-6	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	82	0	0	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_8	36599722	36600836	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5404	1645	2001	1758
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_9	36600933	36601113	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6055	1923	2146	1986
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_10	36601252	36601558	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5069	1623	1790	1656
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_11	36601654	36603089	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5273	1629	1985	1659
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_12	36603230	36605685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5152	1626	1892	1634
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_13	36605802	36605987	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5117	1599	1912	1606
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	junction_14	36606182	36608557	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5222	1687	1881	1654
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_1	36596344	36596806	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6318	1986	2306	2026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_2	36596900	36597207	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6868	2186	2576	2106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_3	36597339	36597700	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5911	1859	2144	1908
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_4	36597786	36598216	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6057	1878	2262	1917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_5	36598372	36598445	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6321	2057	2305	1959
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_6	36598557	36599195	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5838	1863	2136	1839
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_7	36599287	36599448	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6058	1945	2294	1819
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_8	36599722	36600836	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5404	1645	2001	1758
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_9	36600933	36601113	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6055	1923	2146	1986
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_10	36601252	36601558	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5069	1623	1790	1656
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_11	36601654	36603089	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5273	1629	1985	1659
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_12	36603230	36605687	?????	novel	known	novel	0	-2	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_13	36605802	36605987	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5117	1599	1912	1606
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	junction_14	36606182	36608557	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5222	1687	1881	1654
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_1	38662328	38673100	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1450	508	440	502
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_2	38673265	38674140	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1660	570	537	553
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_3	38674209	38676271	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1445	487	437	521
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_4	38676358	38677762	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1512	535	471	506
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_5	38677858	38679563	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1493	527	450	516
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_6	38679656	38681310	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1418	505	463	450
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_7	38681410	38683184	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1461	502	462	497
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_8	38683254	38687047	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1356	462	457	437
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_9	38687141	38687259	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1372	478	434	460
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_10	38687354	38689368	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1528	545	491	492
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_11	38689467	38690776	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1642	582	488	572
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	junction_12	38690904	38691855	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1269	435	393	441
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008726	chr15	+	junction_1	52576083	52582741	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	625	219	202	204
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008726	chr15	+	junction_2	52582901	52584419	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	604	214	185	205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008726	chr15	+	junction_3	52584525	52593462	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	630	203	220	207
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008740	chr15	-	junction_1	55397734	55402425	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1061	365	354	342
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008740	chr15	-	junction_2	55402548	55403518	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1012	356	334	322
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008740	chr15	-	junction_3	55403606	55406719	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	963	318	325	320
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008740	chr15	-	junction_4	55406781	55418715	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	91	33	28	30
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008841	chr15	-	junction_1	75741955	75743124	?????	novel	novel	novel	3242	-4279	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	76	22	25	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008841	chr15	-	junction_2	75743208	75744217	?????	novel	novel	novel	4495	-5372	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	77	26	31	20
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008841	chr15	-	junction_3	75744419	75754245	?????	novel	novel	novel	5706	2108	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	55	19	17	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008861	chr15	-	junction_1	75767441	75767580	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3397	1096	1203	1098
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008861	chr15	-	junction_2	75767776	75768091	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3428	1164	1175	1089
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008861	chr15	-	junction_3	75768314	75768488	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3134	1056	1104	974
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008861	chr15	-	junction_4	75768590	75768668	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3176	1096	1105	975
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008861	chr15	-	junction_5	75768769	75772980	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	464	166	158	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008861	chr15	-	junction_6	75773105	75781095	?????	novel	known	novel	0	-2	TRUE	GTAG	canonical	FALSE	NA	NA	NA	2	6	5	0	1
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008961	chr15	-	junction_1	76553341	76553428	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	343	115	118	110
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008961	chr15	-	junction_2	76553534	76553804	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	304	90	101	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008969	chr15	+	junction_1	76764983	76765311	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	105	24	40	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008969	chr15	+	junction_2	76765439	76772430	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	83	26	28	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008969	chr15	+	junction_3	76772548	76774206	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	76	27	25	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008987	chr15	+	junction_1	76788645	76788738	?????	novel	novel	known	-6	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008987	chr15	+	junction_2	76788881	76789017	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10804	3588	3719	3497
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008987	chr15	+	junction_3	76789237	76790055	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10962	3667	3797	3498
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008987	chr15	+	junction_4	76790172	76790320	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11497	3839	3924	3734
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008994	chr15	+	junction_1	76788651	76788738	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11456	3797	3921	3738
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008994	chr15	+	junction_2	76788881	76789017	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10804	3588	3719	3497
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008994	chr15	+	junction_3	76789237	76790055	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10962	3667	3797	3498
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008994	chr15	+	junction_4	76790176	76790320	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009040	chr15	+	junction_1	78291064	78294242	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009040	chr15	+	junction_2	78294865	78297578	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16	5	5	6
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009065	chr15	+	junction_1	78819895	78820678	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17	7	5	5
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009065	chr15	+	junction_2	78820785	78821333	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	449	162	148	139
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009065	chr15	+	junction_3	78821383	78822007	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	531	191	182	158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009065	chr15	+	junction_4	78822151	78824265	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	454	161	160	133
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009065	chr15	+	junction_5	78824367	78824659	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	424	136	159	129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009069	chr15	+	junction_1	78915321	78918130	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1420	495	488	437
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009069	chr15	+	junction_2	78918262	78919159	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1367	448	483	436
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009069	chr15	+	junction_3	78919262	78919456	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1224	412	402	410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009069	chr15	+	junction_4	78919604	78919976	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1208	392	421	395
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009069	chr15	+	junction_5	78920132	78920219	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1265	432	418	415
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009069	chr15	+	junction_6	78920303	78920466	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1189	409	390	390
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009069	chr15	+	junction_7	78920639	78920952	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1278	405	459	414
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009069	chr15	+	junction_8	78921075	78921342	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1317	470	438	409
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009089	chr15	+	junction_1	79025635	79028793	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2049	693	718	638
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009089	chr15	+	junction_2	79028868	79030252	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009089	chr15	+	junction_3	79030384	79035535	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2040	719	641	680
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009089	chr15	+	junction_4	79035608	79035788	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2023	688	689	646
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_1	79414719	79415878	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	60	15	27	18
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_2	79416116	79420157	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	75	29	19	27
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_3	79420218	79421197	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	96	28	36	32
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_4	79421260	79421635	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	84	25	39	20
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_5	79421747	79422759	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	94	32	41	21
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_6	79422933	79423018	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	69	25	25	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_7	79423180	79423519	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	70	18	31	21
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_8	79423662	79424613	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	60	16	26	18
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_9	79424680	79425234	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	57	18	24	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_10	79425369	79426687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	73	23	33	17
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_11	79426788	79427906	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	71	22	32	17
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	junction_12	79428058	79430395	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	55	20	21	14
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009124	chr15	+	junction_1	79555210	79555373	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1030	339	356	335
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009124	chr15	+	junction_2	79555493	79556097	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	922	292	351	279
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009124	chr15	+	junction_3	79556216	79556417	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	903	274	332	297
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009135	chr15	-	junction_1	79646727	79647710	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	121	42	34	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009135	chr15	-	junction_2	79647795	79649016	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	159	45	49	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009135	chr15	-	junction_3	79649223	79649987	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	63	17	20	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	junction_1	79962096	79962187	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	26994	9001	9102	8891
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	junction_2	79962308	79962531	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	30916	10255	10370	10291
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	junction_3	79962628	79962903	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	junction_4	79963010	79963890	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23824	7967	7899	7958
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	junction_5	79964052	79964566	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	31128	10459	10408	10261
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	junction_6	79964754	79965096	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	28682	9698	9375	9609
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	junction_7	79965233	79965815	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	29866	10302	9641	9923
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	junction_8	79965985	79966590	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	32075	10742	10671	10662
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	junction_9	79966784	79967524	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16287	5358	5410	5519
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009239	chr15	-	junction_1	81835814	81836124	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1199	416	408	375
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009239	chr15	-	junction_2	81836241	81836925	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1009	344	334	331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009239	chr15	-	junction_3	81837002	81839849	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	940	283	340	317
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009239	chr15	-	junction_4	81839950	81840369	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1051	351	356	344
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009239	chr15	-	junction_5	81840462	81840562	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1127	382	378	367
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009239	chr15	-	junction_6	81840640	81841993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1144	368	406	370
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009239	chr15	-	junction_7	81842112	81844915	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1141	391	380	370
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009291	chr15	+	junction_1	82230471	82232100	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1603	532	567	504
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009291	chr15	+	junction_2	82232242	82233043	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1353	452	450	451
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009374	chr15	-	junction_1	85691740	85692456	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	301	105	101	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009374	chr15	-	junction_2	85692569	85693412	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	350	124	115	111
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009374	chr15	-	junction_3	85693526	85695102	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	306	105	109	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_1	89240147	89244558	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	800	279	252	269
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_2	89244661	89247633	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	988	345	297	346
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_3	89247690	89247807	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1053	370	341	342
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_4	89247893	89247968	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1029	326	351	352
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_5	89248038	89248124	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1004	334	338	332
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_6	89248205	89248290	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1073	375	367	331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_7	89248446	89248815	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	950	306	327	317
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_8	89248900	89249436	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1047	367	358	322
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_9	89249535	89253586	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1038	326	363	349
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_10	89253659	89253818	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1025	329	368	328
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_11	89253886	89254010	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1022	352	329	341
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_12	89254119	89254227	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1019	369	339	311
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_13	89254282	89254440	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	942	345	312	285
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_14	89254516	89254597	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_15	89254692	89254806	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	901	322	299	280
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_16	89254879	89254955	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1001	342	327	332
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_17	89255012	89255094	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1081	356	391	334
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_18	89255197	89255296	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1104	361	400	343
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	junction_19	89255447	89255513	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1133	390	386	357
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009457	chr15	+	junction_1	97275170	97281908	?????	novel	novel	known	3139	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	51	19	17	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009472	chr15	-	junction_1	98034320	98039164	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	125	53	43	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009472	chr15	-	junction_2	98039270	98040531	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	103	33	37	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009484	chr15	-	junction_1	98622484	98624364	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	718	234	250	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009484	chr15	-	junction_2	98624436	98624780	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	698	222	246	230
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009484	chr15	-	junction_3	98624815	98625091	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	637	216	217	204
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009484	chr15	-	junction_4	98625180	98625563	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	632	232	223	177
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009484	chr15	-	junction_5	98625630	98625837	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	673	211	263	199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_1	99519346	99520099	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	702	227	241	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_2	99520206	99521449	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	727	238	257	232
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_3	99521574	99521807	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	717	251	251	215
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_4	99521941	99522118	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	719	264	246	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_5	99522225	99524063	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	687	247	224	216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_6	99524263	99524342	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	663	227	243	193
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_7	99524439	99526514	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	680	242	224	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_8	99526680	99528989	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	665	199	233	233
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_9	99529121	99529960	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	737	235	254	248
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_10	99530079	99530595	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	703	230	265	208
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_11	99530677	99532122	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	672	220	256	196
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_12	99532177	99534012	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	726	249	275	202
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_13	99534083	99535518	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	743	235	272	236
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_14	99535656	99537494	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	702	217	261	224
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_15	99537701	99540763	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	635	222	212	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	junction_16	99540853	99549387	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	453	153	149	151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009563	chr15	-	junction_1	100519908	100520509	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	745	247	264	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009563	chr15	-	junction_2	100520591	100534067	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	762	267	255	240
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009563	chr15	-	junction_3	100534137	100534439	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	310	117	102	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009602	chr15	+	junction_1	102240389	102240524	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	490	174	142	174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009602	chr15	+	junction_2	102240638	102242636	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	485	163	158	164
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009602	chr15	+	junction_3	102242797	102245266	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	504	171	159	174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009602	chr15	+	junction_4	102245420	102245535	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	514	175	173	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009602	chr15	+	junction_5	102245659	102245763	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	510	184	172	154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009602	chr15	+	junction_6	102245946	102246070	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	518	172	173	173
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_1	102379239	102381719	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	49	21	16	12
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_2	102381838	102382565	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	192	66	75	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_3	102382590	102382681	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	186	57	74	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_4	102382715	102383009	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	224	73	84	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_5	102383127	102387050	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	284	97	101	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_6	102387187	102391601	?????	novel	novel	novel	4	-7	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_7	102391724	102392600	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	231	70	88	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_8	102392676	102394382	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	233	71	87	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_9	102394476	102395522	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	393	154	104	135
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_10	102395565	102396639	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	493	169	148	176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_11	102396713	102397210	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	407	135	129	143
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_12	102397250	102398186	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	280	92	97	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_13	102398243	102399068	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	455	147	164	144
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	junction_14	102399239	102406923	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	634	204	239	191
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009679	chr15	-	junction_1	102571564	102573488	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4680	1588	1612	1480
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009679	chr15	-	junction_2	102573683	102574197	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4743	1555	1657	1531
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009679	chr15	-	junction_3	102574291	102576145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4811	1546	1698	1567
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009679	chr15	-	junction_4	102576215	102579452	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3206	1031	1137	1038
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	junction_1	103148956	103149506	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12199	4165	4039	3995
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	junction_2	103149621	103149872	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	35	35	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	junction_3	103150020	103150329	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13334	4473	4512	4349
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	junction_4	103150541	103150632	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12548	4213	4206	4129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	junction_5	103150726	103150806	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12488	4403	4106	3979
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	junction_6	103150900	103151070	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11523	4084	3758	3681
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	junction_7	103151146	103152051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9291	3167	3075	3049
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	junction_8	103152208	103152385	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13313	4626	4441	4246
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	junction_9	103152456	103152682	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12908	4416	4327	4165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_1	4502209	4505100	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	896	303	291	302
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_2	4505235	4507844	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	800	280	268	252
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_3	4507929	4511075	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	881	314	270	297
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_4	4511277	4512227	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	839	296	276	267
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_5	4512381	4514252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	830	294	285	251
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_6	4514401	4515114	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	774	284	240	250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_7	4515180	4517612	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	776	268	263	245
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_8	4517742	4519032	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	814	262	284	268
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_9	4519149	4520074	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	843	290	264	289
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_10	4520173	4523707	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	184	60	65	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	junction_11	4523825	4524431	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	195	70	64	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009809	chr16	+	junction_1	4757158	4757241	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	563	194	174	195
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009809	chr16	+	junction_2	4757503	4758059	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	527	152	188	187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009906	chr16	+	junction_1	13981233	13987315	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	293	87	106	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009906	chr16	+	junction_2	13987440	13988201	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	334	98	123	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009906	chr16	+	junction_3	13988356	13993154	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	299	95	114	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009906	chr16	+	junction_4	13993304	14001339	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	273	94	88	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009906	chr16	+	junction_5	14001477	14003557	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	113	81	84
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009906	chr16	+	junction_6	14003738	14006176	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	315	119	97	99
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009906	chr16	+	junction_7	14006269	14007950	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	242	95	72	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009906	chr16	+	junction_8	14008101	14009586	?????	novel	novel	novel	4	-5	FALSE	GTAG	canonical	TRUE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009933	chr16	-	junction_1	15666594	15680261	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	566	196	185	185
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009933	chr16	-	junction_2	15680408	15680611	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	608	183	216	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009933	chr16	-	junction_3	15680797	15681086	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	85	25	32	28
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	junction_1	22926571	22927337	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1632	530	581	521
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	junction_2	22927384	22927468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2185	711	799	675
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	junction_3	22927602	22928734	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	563	162	222	179
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	junction_4	22928904	22928983	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1850	613	662	575
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	junction_5	22929094	22929329	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1929	623	710	596
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	junction_6	22929474	22929875	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1971	689	673	609
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	junction_7	22930014	22930252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2192	686	777	729
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	junction_8	22930343	22930566	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1869	571	685	613
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	junction_9	22930647	22931916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1278	380	504	394
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_1	22926571	22927337	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1632	530	581	521
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_2	22927384	22927468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2185	711	799	675
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_3	22927602	22927869	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1545	505	565	475
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_4	22928010	22928734	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1315	414	445	456
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_5	22928904	22928983	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1850	613	662	575
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_6	22929094	22929329	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1929	623	710	596
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_7	22929474	22929875	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1971	689	673	609
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_8	22930014	22930252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2192	686	777	729
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_9	22930343	22930566	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1869	571	685	613
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	junction_10	22930647	22931916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1278	380	504	394
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_1	22926571	22927334	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	441	132	158	151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_2	22927384	22927468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2185	711	799	675
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_3	22927602	22927869	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1545	505	565	475
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_4	22928010	22928734	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1315	414	445	456
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_5	22928904	22928983	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1850	613	662	575
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_6	22929094	22929329	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1929	623	710	596
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_7	22929474	22929875	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1971	689	673	609
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_8	22930014	22930252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2192	686	777	729
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_9	22930343	22930566	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1869	571	685	613
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	junction_10	22930647	22931916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1278	380	504	394
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_1	22926571	22927334	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	441	132	158	151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_2	22927384	22927468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2185	711	799	675
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_3	22927602	22927869	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1545	505	565	475
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_4	22928010	22928734	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1315	414	445	456
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_5	22928904	22928983	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1850	613	662	575
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_6	22929094	22929329	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1929	623	710	596
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_7	22929474	22929878	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_8	22930014	22930252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2192	686	777	729
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_9	22930343	22930566	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1869	571	685	613
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	junction_10	22930647	22931916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1278	380	504	394
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_1	32427855	32431985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	439	131	167	141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_2	32432045	32433383	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	509	154	185	170
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_3	32433586	32434010	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	425	159	137	129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_4	32434213	32435566	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	444	141	176	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_5	32435717	32435914	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	409	142	155	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_6	32436018	32437035	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	431	145	168	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_7	32437150	32437450	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	425	146	148	131
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_8	32437550	32437854	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	424	139	163	122
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_9	32437995	32439183	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	399	144	145	110
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_10	32439342	32439992	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	432	152	148	132
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_11	32440116	32441874	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	450	136	164	150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_12	32441961	32442189	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	457	142	163	152
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_13	32442254	32443186	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	467	160	156	151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_14	32443255	32443585	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	479	181	141	157
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_15	32443645	32443801	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	438	150	139	149
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_16	32443884	32445366	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	429	147	145	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_17	32445589	32447293	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	465	147	160	158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	junction_18	32447435	32448911	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	447	157	177	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010291	chr16	-	junction_1	35864462	35866748	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	971	314	334	323
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010291	chr16	-	junction_2	35866858	35870211	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1081	375	338	368
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010291	chr16	-	junction_3	35870321	35872655	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1054	350	357	347
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010291	chr16	-	junction_4	35872779	35891839	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1046	369	326	351
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010504	chr16	-	junction_1	84624884	84625312	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6096	2005	2069	2022
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010504	chr16	-	junction_2	84625438	84628216	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7273	2501	2348	2424
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010504	chr16	-	junction_3	84628396	84630707	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	537	173	172	192
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010504	chr16	-	junction_4	84630763	84631696	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	198	63	63	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_1	91418637	91418734	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1740	580	601	559
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_2	91418851	91419780	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1638	563	551	524
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_3	91419923	91420258	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1752	575	590	587
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_4	91420390	91421214	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1527	495	500	532
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_5	91421353	91422201	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1474	548	471	455
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_6	91422409	91424914	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1536	512	525	499
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_7	91425068	91425309	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1621	568	543	510
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_8	91425562	91426930	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1588	541	532	515
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_9	91427130	91427493	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1369	433	473	463
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_10	91427604	91427864	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1417	475	493	449
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_11	91427960	91430762	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1441	497	496	448
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_12	91430995	91432881	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2030	641	712	677
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_13	91433051	91433394	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1737	583	615	539
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_14	91433481	91433879	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1634	536	569	529
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_15	91433968	91434817	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1816	607	592	617
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_16	91434944	91435614	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1827	613	591	623
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_17	91435684	91436227	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1830	607	636	587
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_18	91436340	91438099	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1974	653	659	662
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_19	91438275	91438481	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1967	647	657	663
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_20	91438578	91439844	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2180	709	737	734
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	junction_21	91440035	91443771	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1247	400	422	425
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010566	chr16	-	junction_1	91722280	91722428	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6465	2184	2115	2166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010566	chr16	-	junction_2	91722516	91723346	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5679	1863	1846	1970
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010566	chr16	-	junction_3	91723460	91723740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6240	2163	2003	2074
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010566	chr16	-	junction_4	91723871	91725786	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6665	2242	2212	2211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010566	chr16	-	junction_5	91725898	91727241	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6477	2189	2140	2148
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010597	chr16	+	junction_1	93508957	93513037	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	21	9	5	7
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010597	chr16	+	junction_2	93513201	93536041	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	31	10	7	14
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010597	chr16	+	junction_3	93536224	93536856	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	33	6	18	9
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_1	7006867	7007028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	975	324	345	306
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_2	7007281	7008361	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1066	335	387	344
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_3	7008455	7008819	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	903	288	324	291
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_4	7008981	7009752	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	973	324	325	324
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_5	7009884	7010088	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	824	275	285	264
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_6	7010253	7014662	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	926	302	340	284
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_7	7014760	7020381	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	786	257	312	217
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_8	7020529	7021384	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	970	304	354	312
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_9	7021469	7022009	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	974	325	346	303
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_10	7022285	7023246	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	851	287	301	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_11	7023343	7026877	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	875	275	336	264
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	junction_12	7026962	7050030	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	894	276	325	293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010819	chr17	-	junction_1	15742056	15742177	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	972	316	313	343
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010819	chr17	-	junction_2	15742292	15743064	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	869	300	292	277
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010819	chr17	-	junction_3	15743169	15745530	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	811	279	277	255
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010819	chr17	-	junction_4	15745663	15746634	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	843	271	301	271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010819	chr17	-	junction_5	15746875	15747252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	817	271	276	270
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010828	chr17	+	junction_1	17225539	17257537	?????	novel	novel	novel	34045	48245	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	94	28	37	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010828	chr17	+	junction_2	17257665	17257906	?????	novel	novel	novel	-26804	47876	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	142	39	63	40
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010828	chr17	+	junction_3	17257968	17259258	?????	novel	novel	novel	-26501	46524	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	137	42	55	40
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010839	chr17	+	junction_1	17399714	17422956	?????	novel	novel	novel	36286	-58236	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	252	77	81	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010839	chr17	+	junction_2	17423084	17423325	?????	novel	novel	novel	-32204	-58605	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	220	91	55	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010839	chr17	+	junction_3	17423387	17424679	?????	novel	novel	novel	-31901	58060	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	115	45	33	37
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010887	chr17	+	junction_1	23945616	23951310	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	487	154	168	165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010887	chr17	+	junction_2	23951799	23952796	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	384	143	126	115
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010887	chr17	+	junction_3	23953291	23953939	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	419	145	136	138
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010887	chr17	+	junction_4	23954047	23954173	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	438	141	147	150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010887	chr17	+	junction_5	23954347	23954536	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	486	155	182	149
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010887	chr17	+	junction_6	23954695	23955297	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	560	194	201	165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010887	chr17	+	junction_7	23955376	23955468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	451	154	168	129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010944	chr17	+	junction_1	24645717	24645826	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	455	170	140	145
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010944	chr17	+	junction_2	24645914	24652106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	503	172	157	174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010944	chr17	+	junction_3	24652235	24655151	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	538	189	173	176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010944	chr17	+	junction_4	24655299	24656193	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	573	211	160	202
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010944	chr17	+	junction_5	24656316	24656405	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	568	208	180	180
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010944	chr17	+	junction_6	24656585	24657922	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	556	201	158	197
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010957	chr17	+	junction_1	24747411	24747609	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	77	20	33	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010988	chr17	+	junction_1	24939427	24939507	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8303	2724	3004	2575
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010988	chr17	+	junction_2	24939706	24939942	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9469	3076	3369	3024
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010988	chr17	+	junction_3	24940277	24940596	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11048	3679	3797	3572
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010988	chr17	+	junction_4	24940689	24940776	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10975	3570	3772	3633
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010998	chr17	+	junction_1	24939427	24939507	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8303	2724	3004	2575
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010998	chr17	+	junction_2	24939706	24939942	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9469	3076	3369	3024
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010998	chr17	+	junction_3	24940281	24940596	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	1	2	0	2	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010998	chr17	+	junction_4	24940689	24940776	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10975	3570	3772	3633
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011051	chr17	+	junction_1	25459339	25459417	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	382	117	138	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011051	chr17	+	junction_2	25459638	25460037	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	375	125	122	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011051	chr17	+	junction_3	25460232	25460661	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	415	145	126	144
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011051	chr17	+	junction_4	25460836	25461132	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	432	156	139	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011051	chr17	+	junction_5	25461197	25461427	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	471	164	155	152
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011055	chr17	-	junction_1	25481466	25483739	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4875	1620	1620	1635
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011055	chr17	-	junction_2	25483820	25484092	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5148	1726	1702	1720
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011055	chr17	-	junction_3	25484203	25487514	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4616	1588	1503	1525
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011055	chr17	-	junction_4	25487588	25488165	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4553	1523	1496	1534
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011055	chr17	-	junction_5	25488250	25488376	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5070	1761	1555	1754
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011055	chr17	-	junction_6	25488454	25492294	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4214	1516	1288	1410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011160	chr17	-	junction_1	27157151	27157391	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	930	299	319	312
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011160	chr17	-	junction_2	27157442	27157545	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	921	316	320	285
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011160	chr17	-	junction_3	27157592	27157700	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	797	254	291	252
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011160	chr17	-	junction_4	27157761	27157857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	982	356	336	290
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011160	chr17	-	junction_5	27158067	27158290	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	511	187	152	172
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011175	chr17	-	junction_1	27341815	27344120	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	2713	922	928	863
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011175	chr17	-	junction_2	27344191	27344857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3066	1078	1016	972
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011175	chr17	-	junction_3	27344933	27352713	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2777	975	921	881
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011228	chr17	-	junction_1	27849481	27850169	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011228	chr17	-	junction_2	27850230	27851252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6042	2021	2141	1880
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011228	chr17	-	junction_3	27851331	27853045	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6860	2305	2382	2173
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011228	chr17	-	junction_4	27853218	27853299	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6238	2133	2148	1957
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011228	chr17	-	junction_5	27853450	27854177	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4719	1594	1637	1488
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011232	chr17	-	junction_1	27849481	27850173	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4850	1621	1718	1511
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011232	chr17	-	junction_2	27850230	27851252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6042	2021	2141	1880
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011232	chr17	-	junction_3	27851325	27853045	?????	novel	novel	known	-6	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	29	0	29	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011232	chr17	-	junction_4	27853218	27853299	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6238	2133	2148	1957
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011317	chr17	+	junction_1	29312836	29317370	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1306	394	481	431
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011317	chr17	+	junction_2	29317812	29318317	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1159	375	423	361
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_1	29551753	29552487	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1184	410	415	359
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_2	29552564	29552748	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1157	395	382	380
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_3	29552817	29552931	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1234	413	425	396
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_4	29552980	29555191	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	643	213	235	195
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_5	29555286	29557715	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1027	336	364	327
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_6	29557776	29558764	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1143	383	388	372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_7	29558817	29559041	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1112	376	362	374
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_8	29559100	29559394	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1044	331	341	372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_9	29559473	29559764	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1116	384	360	372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_10	29559872	29561796	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1281	406	418	457
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	junction_11	29561882	29566440	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1158	405	361	392
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011477	chr17	-	junction_1	34042091	34042170	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4589	1513	1583	1493
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011477	chr17	-	junction_2	34042305	34043272	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	22076	7205	7737	7134
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011477	chr17	-	junction_3	34043321	34043407	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16929	5510	5940	5479
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011534	chr17	-	junction_1	34171093	34171194	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	21077	6990	7520	6567
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011534	chr17	-	junction_2	34171268	34171376	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	518	168	206	144
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011534	chr17	-	junction_3	34171566	34174051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23117	7647	8061	7409
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011534	chr17	-	junction_4	34174151	34174591	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20050	6537	6956	6557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011539	chr17	-	junction_1	34171093	34171194	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	21077	6990	7520	6567
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011539	chr17	-	junction_2	34171287	34171376	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23355	7613	8336	7406
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011539	chr17	-	junction_3	34171566	34174051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23117	7647	8061	7409
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011539	chr17	-	junction_4	34174144	34174591	?????	novel	novel	known	-7	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	2	8	0	4	4
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011535	chr17	-	junction_1	34171093	34171194	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	21077	6990	7520	6567
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011535	chr17	-	junction_2	34171287	34171374	?????	novel	known	novel	0	2	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011535	chr17	-	junction_3	34171566	34174051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23117	7647	8061	7409
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011535	chr17	-	junction_4	34174151	34174591	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20050	6537	6956	6557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011573	chr17	+	junction_1	34525022	34528564	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	188	62	69	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011573	chr17	+	junction_2	34528835	34533143	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	177	54	56	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011573	chr17	+	junction_3	34533426	34534016	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	212	74	66	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011573	chr17	+	junction_4	34534128	34534825	?????	novel	known	novel	0	22	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011588	chr17	-	junction_1	35043301	35043489	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	81	32	27	22
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011588	chr17	-	junction_2	35043638	35043726	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	94	45	19	30
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011588	chr17	-	junction_3	35043825	35050988	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	89	40	22	27
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011588	chr17	-	junction_4	35051129	35051421	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	85	23	28	34
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011588	chr17	-	junction_5	35051518	35055405	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	90	27	29	34
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011588	chr17	-	junction_6	35055543	35055752	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	82	31	25	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_1	35069565	35069886	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	266	93	87	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_2	35069970	35071319	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	554	174	214	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_3	35071390	35071491	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	514	168	194	152
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_4	35071638	35072400	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	523	183	185	155
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_5	35072476	35072588	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	434	138	146	150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_6	35072627	35072783	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	457	153	157	147
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_7	35073110	35073196	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	550	208	164	178
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_8	35073342	35073420	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	564	190	201	173
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_9	35073476	35073671	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	526	177	197	152
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	junction_10	35073775	35075063	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	503	172	168	163
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011608	chr17	-	junction_1	35169452	35170860	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	38	2	18	18
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011608	chr17	-	junction_2	35170902	35171111	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	115	38	40	37
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011608	chr17	-	junction_3	35171150	35171327	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	94	24	34	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011619	chr17	-	junction_1	35169452	35169673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	190	70	68	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011619	chr17	-	junction_2	35169824	35171111	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5	2	2	1
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011619	chr17	-	junction_3	35171150	35171327	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	94	24	34	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011620	chr17	-	junction_1	35169452	35169673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	190	70	68	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011620	chr17	-	junction_2	35169824	35170860	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	110	39	35	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011667	chr17	+	junction_1	35340775	35342028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	45	18	11	16
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011667	chr17	+	junction_2	35342636	35343195	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	88	27	34	27
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_1	35362659	35363126	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	624	207	227	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_2	35363419	35363574	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	670	213	253	204
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_3	35363745	35363921	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	700	220	270	210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_4	35363976	35364112	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	739	217	308	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_5	35364216	35364304	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	849	267	334	248
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_6	35364430	35364581	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	697	218	263	216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_7	35364729	35364837	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	850	276	328	246
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_8	35364898	35365001	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	799	260	301	238
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_9	35365146	35365221	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	871	267	345	259
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_10	35365330	35365732	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	713	240	253	220
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	junction_11	35365880	35366116	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	699	252	243	204
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011704	chr17	+	junction_1	36132821	36132929	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7	3	2	2
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011718	chr17	-	junction_1	36146917	36147045	?????	novel	novel	novel	-15	9	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011718	chr17	-	junction_2	36147166	36147519	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8781	2853	3086	2842
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011718	chr17	-	junction_3	36147629	36148888	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10173	3331	3573	3269
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_1	45896709	45897019	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2235	746	789	700
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_2	45897232	45898153	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2322	803	828	691
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_3	45898240	45898487	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2232	759	746	727
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_4	45898597	45899214	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2327	797	761	769
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_5	45899313	45899927	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1453	498	498	457
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_6	45900001	45900133	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2371	826	810	735
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_7	45900232	45900339	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2605	875	857	873
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_8	45900475	45900606	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2349	792	785	772
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_9	45900747	45900848	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2274	764	766	744
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_10	45901052	45901182	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2682	919	895	868
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_11	45901265	45903104	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2448	879	765	804
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_12	45903188	45904257	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2267	812	726	729
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	junction_13	45904359	45906407	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1762	592	580	590
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011857	chr17	-	junction_1	45912612	45912708	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	164	43	61	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011875	chr17	+	junction_1	46422056	46428865	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1078	345	362	371
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011875	chr17	+	junction_2	46428898	46433649	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1063	331	360	372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011875	chr17	+	junction_3	46433758	46436215	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1175	403	384	388
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011875	chr17	+	junction_4	46436340	46436568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1105	382	346	377
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011875	chr17	+	junction_5	46436639	46439430	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1040	348	332	360
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011900	chr17	+	junction_1	46807899	46809350	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	641	222	231	188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011900	chr17	+	junction_2	46809420	46809568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	629	217	226	186
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011900	chr17	+	junction_3	46809680	46809802	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	701	234	234	233
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012023	chr17	-	junction_1	48726662	48729968	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	80	30	26	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012023	chr17	-	junction_2	48730534	48739506	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	57	19	21	17
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012097	chr17	+	junction_1	56920681	56920906	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11229	3829	3829	3571
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012097	chr17	+	junction_2	56921042	56921123	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9970	3301	3427	3242
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012100	chr17	+	junction_1	56921042	56921123	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9970	3301	3427	3242
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_1	79227447	79227977	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	706	223	260	223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_2	79228060	79228150	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	681	221	226	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_3	79228210	79229063	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	663	243	232	188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_4	79229151	79229558	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	639	224	228	187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_5	79229744	79229942	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	640	229	212	199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_6	79230001	79230664	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	644	206	233	205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_7	79230766	79231874	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	670	230	240	200
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_8	79231942	79233342	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	578	197	206	175
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_9	79233412	79233511	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	573	197	215	161
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_10	79233615	79234297	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	578	194	201	183
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_11	79234352	79236706	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	646	214	230	202
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_12	79236796	79238738	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	644	208	248	188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_13	79238926	79239538	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	465	175	161	129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_14	79239771	79242003	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	573	198	215	160
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	junction_15	79243497	79244303	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	619	214	220	185
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	junction_1	88282834	88287618	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2254	805	755	694
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	junction_2	88287819	88290872	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2207	674	824	709
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	junction_3	88291043	88291873	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2243	740	801	702
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	junction_4	88294410	88295613	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2701	869	941	891
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	junction_5	88295883	88296571	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2722	907	943	872
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	junction_6	88296690	88296857	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	junction_7	88296945	88297621	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2616	862	909	845
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	junction_8	88297777	88297858	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2986	1013	1045	928
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	junction_9	88298059	88298151	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2637	852	935	850
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_1	13105430	13107769	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	830	290	297	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_2	13107899	13109035	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	838	270	286	282
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_3	13109089	13109525	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	854	277	304	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_4	13109589	13115146	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	811	275	284	252
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_5	13115233	13117295	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	845	281	311	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_6	13117422	13118275	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	768	274	266	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_7	13118374	13119380	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	240	302	239
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_8	13119455	13121351	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	784	239	290	255
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_9	13121443	13122801	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	761	253	271	237
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	junction_10	13122937	13123549	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	891	288	339	264
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_1	24737190	24739913	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	896	299	310	287
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_2	24739993	24742686	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	817	287	293	237
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_3	24742758	24744969	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	885	298	313	274
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_4	24745127	24745504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	836	281	299	256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_5	24745583	24747472	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	667	211	244	212
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_6	24747538	24748217	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	771	252	272	247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_7	24748285	24748945	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	776	266	267	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_8	24749084	24750457	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	743	249	233	261
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_9	24750554	24752134	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	789	278	245	266
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_10	24752236	24752438	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	867	286	307	274
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_11	24752571	24755135	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	751	236	269	246
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_12	24755295	24755535	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	896	307	305	284
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_13	24755725	24758568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	783	250	282	251
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_14	24758636	24759181	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	898	300	305	293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_15	24759275	24759444	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	977	305	357	315
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_16	24759503	24760051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	916	286	346	284
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_17	24760125	24764415	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	889	294	316	279
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_18	24764609	24765815	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	722	249	247	226
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_19	24765938	24767395	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	770	265	277	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_20	24767530	24767957	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	938	317	316	305
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	junction_21	24768066	24771450	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	999	346	351	302
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012476	chr18	+	junction_1	31937308	31960314	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	459	150	165	144
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012476	chr18	+	junction_2	31960542	31962284	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	472	159	166	147
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012476	chr18	+	junction_3	31962354	31962927	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	431	142	148	141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012476	chr18	+	junction_4	31963033	31966362	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	387	136	133	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012476	chr18	+	junction_5	31966459	31966635	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	410	131	152	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_1	35071447	35071636	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6613	2297	2265	2051
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_2	35071778	35071985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6556	2174	2175	2207
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_3	35072079	35072395	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6822	2293	2324	2205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_4	35072491	35073249	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6602	2261	2241	2100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_5	35073368	35073892	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5978	2004	2033	1941
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_6	35073998	35074917	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6052	2120	1988	1944
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_7	35075146	35076128	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6552	2152	2319	2081
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_8	35076339	35078996	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	6113	2009	2106	1998
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_9	35079090	35079548	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6224	2037	2139	2048
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_10	35079712	35080963	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6213	2061	2110	2042
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_11	35081071	35081158	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6542	2243	2237	2062
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_12	35081233	35082069	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6028	2092	2025	1911
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_13	35082195	35084276	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6374	2154	2240	1980
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_14	35084459	35085448	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6346	2150	2196	2000
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_15	35085537	35085729	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6784	2251	2331	2202
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	junction_16	35085789	35087222	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	6097	2045	2062	1990
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012551	chr18	+	junction_1	35686523	35687479	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	167	43	64	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012551	chr18	+	junction_2	35687515	35689668	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	201	53	81	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012551	chr18	+	junction_3	35689745	35690389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	202	60	84	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012595	chr18	-	junction_1	36800713	36800843	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1539	515	526	498
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012595	chr18	-	junction_2	36800953	36801704	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1470	498	507	465
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012595	chr18	-	junction_3	36801902	36803056	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1566	517	517	532
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012595	chr18	-	junction_4	36803183	36803300	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1172	381	381	410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012599	chr18	+	junction_1	36812677	36813568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	269	96	91	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012599	chr18	+	junction_2	36813668	36814580	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	461	150	152	159
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_1	42335784	42343084	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2390	849	763	778
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_2	42343218	42344227	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2358	776	848	734
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_3	42344324	42345572	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2189	732	762	695
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_4	42345678	42347824	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1881	628	644	609
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_5	42347936	42349916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2146	712	743	691
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_6	42350028	42350532	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2164	758	739	667
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_7	42350674	42351568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2089	721	681	687
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_8	42351710	42352922	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1841	622	634	585
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_9	42353014	42354543	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1859	617	618	624
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_10	42354728	42358818	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1789	625	564	600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_11	42358883	42360300	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1461	516	460	485
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_12	42360359	42361070	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1871	645	624	602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_13	42361284	42361722	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2007	715	661	631
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_14	42361862	42362693	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2013	700	668	645
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_15	42362777	42362855	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1831	661	572	598
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_16	42362922	42363006	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1861	672	581	608
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_17	42363093	42366864	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1883	626	620	637
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_18	42366943	42367645	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2003	657	693	653
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_19	42367787	42368549	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1440	479	528	433
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_20	42368604	42369643	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_21	42369725	42369803	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1745	584	578	583
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_22	42369892	42374967	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2033	706	707	620
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_23	42375194	42375768	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1860	590	638	632
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_24	42375837	42376031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1824	609	619	596
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_25	42376096	42376841	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1989	657	697	635
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_26	42376955	42377813	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1679	579	551	549
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_27	42377976	42379004	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1672	548	550	574
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_28	42379143	42383893	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1822	579	621	622
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_29	42383975	42384357	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2112	690	693	729
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_30	42384446	42390134	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1768	589	566	613
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	junction_31	42390260	42395025	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1504	513	495	496
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012731	chr18	+	junction_1	56706208	56708533	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	376	123	126	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012731	chr18	+	junction_2	56709121	56713251	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	462	148	171	143
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012731	chr18	+	junction_3	56713373	56717362	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	442	140	174	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012731	chr18	+	junction_4	56717447	56719948	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	396	131	143	122
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012743	chr18	+	junction_1	57487964	57495504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	510	170	147	193
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012743	chr18	+	junction_2	57495622	57496147	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	572	190	185	197
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012743	chr18	+	junction_3	57496538	57498260	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	518	163	174	181
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012743	chr18	+	junction_4	57498422	57504438	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	500	157	172	171
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012743	chr18	+	junction_5	57504542	57507598	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	523	178	178	167
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012743	chr18	+	junction_6	57507763	57514699	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	909	303	305	301
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012743	chr18	+	junction_7	57514804	57517245	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	933	296	321	316
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012743	chr18	+	junction_8	57517349	57522291	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	950	329	311	310
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012752	chr18	+	junction_1	58792870	58804279	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	565	208	201	156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012752	chr18	+	junction_2	58804400	58804519	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	540	191	187	162
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012752	chr18	+	junction_3	58804724	58806321	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	445	149	157	139
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012752	chr18	+	junction_4	58806439	58810836	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	482	154	175	153
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012909	chr18	-	junction_1	74330123	74330584	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	497	165	163	169
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012909	chr18	-	junction_2	74330755	74332970	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	517	190	187	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012909	chr18	-	junction_3	74333109	74335660	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	494	180	176	138
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012909	chr18	-	junction_4	74335759	74337334	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	467	169	154	144
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012909	chr18	-	junction_5	74337460	74339859	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	433	158	140	135
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012909	chr18	-	junction_6	74339956	74340664	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	429	144	149	136
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012942	chr18	+	junction_1	75502640	75503965	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1752	564	654	534
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012942	chr18	+	junction_2	75504020	75508944	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1522	490	562	470
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012942	chr18	+	junction_3	75509020	75526897	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1704	567	607	530
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013050	chr19	+	junction_1	3758437	3764403	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	184	61	55	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013050	chr19	+	junction_2	3764626	3765637	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	300	107	95	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013050	chr19	+	junction_3	3765803	3766490	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	297	114	96	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013131	chr19	+	junction_1	4242271	4242743	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3983	1337	1326	1320
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013131	chr19	+	junction_2	4242873	4243020	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	12	12	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013131	chr19	+	junction_3	4243252	4243765	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3675	1229	1225	1221
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013131	chr19	+	junction_4	4243871	4244465	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4068	1415	1354	1299
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013131	chr19	+	junction_5	4244690	4244770	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3692	1248	1247	1197
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013131	chr19	+	junction_6	4244906	4244980	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	4106	1371	1392	1343
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_1	4957826	4959873	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	896	289	308	299
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_2	4960037	4963800	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	916	295	347	274
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_3	4963981	4964607	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	765	259	281	225
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_4	4964729	4964837	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	734	238	270	226
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_5	4964963	4965046	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	722	225	271	226
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_6	4965110	4966306	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	823	287	278	258
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_7	4966400	4966725	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	689	240	238	211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_8	4966839	4966919	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	708	232	248	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_9	4967115	4967899	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	737	238	272	227
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_10	4967959	4968047	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	877	293	307	277
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_11	4968179	4968272	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	866	289	320	257
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_12	4968404	4971168	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	741	227	274	240
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_13	4971263	4972349	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	756	268	241	247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_14	4972421	4973094	?????	novel	novel	known	-4	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_15	4973233	4973711	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	691	244	228	219
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_16	4973802	4976812	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	722	257	245	220
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	junction_17	4977088	4978247	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	495	166	171	158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_1	5653581	5653661	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	357	127	118	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_2	5653744	5653857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	428	140	155	133
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_3	5654018	5655399	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	338	124	115	99
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_4	5655494	5655570	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	383	147	115	121
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_5	5655712	5657578	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	372	139	116	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_6	5657669	5657743	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	300	106	92	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_7	5657993	5658282	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	404	135	145	124
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_8	5658358	5658665	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	397	132	137	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_9	5658741	5659263	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	222	84	77	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_10	5659401	5659490	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	403	151	121	131
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	junction_11	5659560	5659879	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	427	148	153	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_1	5808725	5808827	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	313	101	112	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_2	5808889	5808967	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	352	114	111	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_3	5809175	5809298	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	290	92	100	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_4	5809371	5809692	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	287	96	98	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_5	5809833	5810008	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	279	85	99	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_6	5810174	5810560	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	272	89	92	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_7	5810637	5810740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	267	85	89	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_8	5810930	5811680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	301	114	85	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_9	5811837	5814696	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	287	99	108	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_10	5814811	5815337	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	261	98	90	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_11	5815446	5816185	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	282	81	109	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_12	5816345	5819496	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	227	81	82	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_13	5819653	5819748	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	272	77	105	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_14	5819840	5820230	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	267	81	96	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_15	5820581	5820750	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	303	100	107	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	junction_16	5820892	5821247	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	281	93	105	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013358	chr19	+	junction_1	6920415	6928007	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	98	35	28	35
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013358	chr19	+	junction_2	6928199	6928766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	103	29	43	31
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013379	chr19	-	junction_1	6955303	6955378	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	689	239	223	227
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013379	chr19	-	junction_2	6955415	6955757	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	725	258	234	233
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013379	chr19	-	junction_3	6955805	6955925	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	677	263	203	211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013379	chr19	-	junction_4	6956039	6956340	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	687	233	232	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013379	chr19	-	junction_5	6956510	6957761	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	285	97	92	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013392	chr19	-	junction_1	6965477	6965556	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	195	65	79	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013392	chr19	-	junction_2	6965644	6966790	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	188	61	75	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013392	chr19	-	junction_3	6966956	6967048	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	154	45	55	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013392	chr19	-	junction_4	6967234	6968085	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	240	65	82	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013392	chr19	-	junction_5	6968180	6969526	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	195	54	72	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013438	chr19	-	junction_1	8685459	8685557	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3303	1100	1143	1060
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013438	chr19	-	junction_2	8685642	8686368	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3152	1033	1042	1077
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013438	chr19	-	junction_3	8686510	8686595	?????	novel	known	novel	0	-2	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013438	chr19	-	junction_4	8686775	8686913	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3203	1073	1047	1083
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013438	chr19	-	junction_5	8686973	8687078	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3149	1018	1017	1114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013438	chr19	-	junction_6	8687148	8689197	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3081	1017	1046	1018
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013438	chr19	-	junction_7	8689293	8690093	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2940	969	966	1005
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013438	chr19	-	junction_8	8690268	8690705	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2610	874	867	869
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013473	chr19	+	junction_1	8701554	8701766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	272	246	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013473	chr19	+	junction_2	8701848	8702035	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	814	268	273	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013473	chr19	+	junction_3	8702086	8702377	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	931	310	316	305
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013473	chr19	+	junction_4	8702411	8702585	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	951	318	308	325
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013473	chr19	+	junction_5	8702621	8702848	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1003	340	314	349
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013473	chr19	+	junction_6	8702888	8703145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1086	360	345	381
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013473	chr19	+	junction_7	8703212	8703602	?????	novel	novel	known	21	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013474	chr19	+	junction_1	8701554	8701766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	272	246	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013474	chr19	+	junction_2	8701848	8702035	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	814	268	273	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013474	chr19	+	junction_3	8702098	8702791	?????	novel	novel	novel	12	57	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013474	chr19	+	junction_4	8702888	8703145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1086	360	345	381
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013474	chr19	+	junction_5	8703191	8703430	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1169	395	360	414
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013474	chr19	+	junction_6	8703467	8703602	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1057	368	337	352
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013475	chr19	+	junction_1	8701554	8701766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	272	246	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013475	chr19	+	junction_2	8701848	8702035	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	814	268	273	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013475	chr19	+	junction_3	8702086	8702377	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	931	310	316	305
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013475	chr19	+	junction_4	8702415	8702811	?????	novel	novel	novel	4	37	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013475	chr19	+	junction_5	8702888	8703145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1086	360	345	381
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013475	chr19	+	junction_6	8703191	8703430	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1169	395	360	414
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013475	chr19	+	junction_7	8703467	8703602	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1057	368	337	352
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013479	chr19	+	junction_1	8701554	8701766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	272	246	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013479	chr19	+	junction_2	8701848	8702035	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	814	268	273	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013479	chr19	+	junction_3	8702098	8702811	?????	novel	novel	novel	12	37	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013479	chr19	+	junction_4	8702888	8703145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1086	360	345	381
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013479	chr19	+	junction_5	8703191	8703430	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1169	395	360	414
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013479	chr19	+	junction_6	8703467	8703602	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1057	368	337	352
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013488	chr19	+	junction_1	8701554	8701766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	272	246	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013488	chr19	+	junction_2	8701848	8702035	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	814	268	273	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013488	chr19	+	junction_3	8702110	8702811	?????	novel	novel	novel	24	37	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013488	chr19	+	junction_4	8702888	8703145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1086	360	345	381
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013488	chr19	+	junction_5	8703191	8703430	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1169	395	360	414
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013488	chr19	+	junction_6	8703467	8703602	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1057	368	337	352
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013489	chr19	+	junction_1	8701554	8701766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	272	246	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013489	chr19	+	junction_2	8701848	8702035	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	814	268	273	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013489	chr19	+	junction_3	8702086	8702377	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	931	310	316	305
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013489	chr19	+	junction_4	8702448	8702848	?????	novel	novel	known	37	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013489	chr19	+	junction_5	8702888	8703145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1086	360	345	381
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013489	chr19	+	junction_6	8703191	8703430	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1169	395	360	414
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013489	chr19	+	junction_7	8703467	8703602	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1057	368	337	352
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013575	chr19	+	junction_1	8898013	8899169	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	192	67	68	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013575	chr19	+	junction_2	8899345	8903067	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	30	9	11	10
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013575	chr19	+	junction_3	8903263	8903445	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	179	70	58	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013575	chr19	+	junction_4	8903737	8904099	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	226	80	83	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013588	chr19	+	junction_1	8945739	8946525	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8809	2913	3103	2793
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013588	chr19	+	junction_2	8946590	8946727	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8749	2889	3046	2814
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013588	chr19	+	junction_3	8946871	8947207	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8704	2998	2963	2743
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013588	chr19	+	junction_4	8947357	8949877	?????	novel	novel	novel	5	-7	FALSE	GTAG	canonical	FALSE	NA	NA	NA	1	32	0	32	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013588	chr19	+	junction_5	8950001	8950267	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8960	2913	3173	2874
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013588	chr19	+	junction_6	8950473	8954681	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8905	2949	3099	2857
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013588	chr19	+	junction_7	8954855	8954948	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9865	3191	3545	3129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013588	chr19	+	junction_8	8955074	8955307	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9508	3095	3386	3027
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013635	chr19	+	junction_1	10605913	10606442	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3370	1114	1226	1030
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	junction_1	38043530	38045857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	204	72	69	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	junction_2	38045991	38046236	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	113	37	40	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	junction_3	38046432	38048528	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	299	111	100	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	junction_4	38048805	38051050	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	365	131	120	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	junction_5	38051120	38057527	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	398	136	130	132
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	junction_6	38057679	38058087	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	333	102	119	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	junction_7	38058399	38059518	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	354	131	110	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	junction_8	38059591	38060212	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	338	105	109	124
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	junction_9	38060339	38061745	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	313	119	98	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	junction_1	46022620	46022827	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	657	210	251	196
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	junction_2	46022952	46023049	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	724	233	269	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	junction_3	46023134	46023262	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	734	219	280	235
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	junction_4	46023386	46023859	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	772	223	284	265
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	junction_5	46024033	46024173	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	845	256	321	268
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	junction_6	46024277	46024362	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	830	264	309	257
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	junction_7	46024439	46024545	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	782	267	286	229
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	junction_8	46024591	46024701	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	744	249	286	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	junction_9	46024805	46033268	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	738	248	281	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_1	46366909	46367046	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	293	80	108	105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_2	46367088	46367851	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	322	104	116	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_3	46367914	46368020	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	273	93	101	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_4	46368196	46368687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	326	88	124	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_5	46368781	46369355	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	295	98	109	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_6	46369573	46370732	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	287	86	106	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_7	46370858	46372658	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	279	94	103	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_8	46372785	46373451	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	319	99	118	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_9	46373528	46375890	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	77	110	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	junction_10	46375956	46384068	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	317	102	123	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014003	chr19	+	junction_1	47720261	47721068	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1732	554	596	582
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014003	chr19	+	junction_2	47721192	47721288	?????	novel	novel	novel	48	96	FALSE	GTAG	canonical	TRUE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014003	chr19	+	junction_3	47721428	47721957	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1831	586	630	615
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014003	chr19	+	junction_4	47722351	47723262	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1875	634	640	601
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_1	52980151	52983851	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1559	545	494	520
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_2	52983951	52984679	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1398	474	464	460
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_3	52984757	52985330	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1351	465	443	443
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_4	52985505	52986304	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1463	499	463	501
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_5	52986375	52987582	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1358	479	424	455
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_6	52987644	52988819	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1596	561	530	505
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_7	52988892	52990904	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1362	452	476	434
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_8	52990983	52991109	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1205	425	412	368
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_9	52991169	52992194	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1197	406	399	392
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_10	52992246	52993194	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1423	478	459	486
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_11	52993285	52994585	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1473	512	500	461
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_12	52994797	52996301	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1264	430	432	402
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_13	52996384	52998498	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1280	433	448	399
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_14	52998595	53000196	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1344	468	450	426
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_15	53000341	53000619	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1341	464	451	426
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_16	53000713	53001829	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1423	484	464	475
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_17	53001935	53003041	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1508	545	445	518
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_18	53003106	53013689	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1387	521	430	436
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	junction_19	53013815	53026944	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	690	238	244	208
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014039	chr19	-	junction_1	53919934	53920560	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	206	76	74	56
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014039	chr19	-	junction_2	53920637	53931896	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	143	49	52	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014060	chr19	-	junction_1	59311213	59314108	?????	novel	novel	novel	-5093	2074	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_1	3285444	3305848	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	266	108	74	84
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_2	3305985	3306433	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	295	98	97	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_3	3306477	3308019	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	298	96	106	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_4	3308070	3310503	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	258	87	95	76
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_5	3310649	3313492	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	234	72	98	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_6	3313612	3313698	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	245	82	92	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_7	3313791	3313897	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	299	96	114	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_8	3314015	3315730	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	284	93	99	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_9	3315902	3317176	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	301	90	107	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_10	3317286	3323607	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	230	66	88	76
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_11	3323779	3325867	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	291	96	112	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_12	3326036	3326300	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	252	79	93	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	junction_13	3326439	3327107	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	234	70	93	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_1	5799692	5800359	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1070	347	357	366
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_2	5800498	5803171	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	991	337	337	317
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_3	5803301	5808757	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1110	366	375	369
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_4	5808787	5809721	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1030	327	361	342
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_5	5809845	5812241	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	980	338	335	307
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_6	5812318	5815606	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1085	369	363	353
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_7	5815656	5826086	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1067	343	359	365
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_8	5826194	5827912	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	990	324	319	347
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_9	5828009	5837891	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1033	344	348	341
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_10	5837925	5838466	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1061	338	384	339
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_11	5838525	5846763	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1251	437	416	398
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	junction_12	5846836	5849645	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1225	435	399	391
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014151	chr2	-	junction_1	10060973	10063777	?????	novel	known	novel	0	29	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014151	chr2	-	junction_2	10063904	10064311	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4607	1519	1589	1499
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014151	chr2	-	junction_3	10064468	10068096	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4785	1602	1652	1531
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014151	chr2	-	junction_4	10068162	10068253	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	4666	1595	1582	1489
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014151	chr2	-	junction_5	10068398	10068917	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4777	1604	1635	1538
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014151	chr2	-	junction_6	10069123	10073420	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4406	1452	1467	1487
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014151	chr2	-	junction_7	10073553	10074503	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4551	1438	1548	1565
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014151	chr2	-	junction_8	10074539	10085158	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4474	1398	1507	1569
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014171	chr2	+	junction_1	13579806	13580351	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	229	77	94	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014171	chr2	+	junction_2	13580417	13583223	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014171	chr2	+	junction_3	13583320	13583399	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	248	86	80	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014171	chr2	+	junction_4	13583562	13584231	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	269	79	109	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014171	chr2	+	junction_5	13584358	13584828	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	310	92	118	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014171	chr2	+	junction_6	13585050	13585450	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	309	101	124	84
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014171	chr2	+	junction_7	13585495	13586423	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	288	93	124	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014171	chr2	+	junction_8	13586510	13587283	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	327	101	125	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_1	25222989	25223446	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	417	127	169	121
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_2	25223556	25224388	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	387	131	138	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_3	25224505	25228124	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	418	129	154	135
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_4	25228280	25231618	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	358	126	123	109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_5	25231729	25233235	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	383	112	154	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_6	25233422	25234979	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	367	138	116	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_7	25235129	25235417	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	355	114	125	116
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_8	25235607	25238047	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	302	93	107	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_9	25238239	25238582	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	326	115	113	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_10	25238704	25239181	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	351	107	127	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_11	25239380	25239462	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	382	123	123	136
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	junction_12	25239595	25240373	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	413	127	155	131
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014300	chr2	+	junction_1	26518712	26522615	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	52	21	12	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014300	chr2	+	junction_2	26522751	26524799	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	52	20	13	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014300	chr2	+	junction_3	26524908	26524998	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	71	23	20	28
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014300	chr2	+	junction_4	26525176	26525550	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	50	16	16	18
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_1	31360352	31364718	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2348	722	857	769
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_2	31364783	31366897	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2985	943	1124	918
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_3	31367008	31368946	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2937	936	1076	925
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_4	31369016	31370986	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2878	915	1049	914
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_5	31371176	31376500	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2559	813	940	806
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_6	31376558	31378589	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2848	950	996	902
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_7	31378665	31382325	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2900	934	1028	938
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_8	31382416	31388158	?????	novel	novel	known	19	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_9	31388250	31390844	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2563	839	888	836
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_10	31390930	31391499	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2632	848	907	877
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_11	31391565	31400121	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2747	888	976	883
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_12	31400254	31404690	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2876	1001	979	896
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_13	31404848	31408737	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3074	987	1116	971
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	junction_14	31408804	31410383	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3437	1141	1196	1100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014542	chr2	+	junction_1	32851973	32852060	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	310	91	104	115
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014542	chr2	+	junction_2	32852135	32852585	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6045	2061	1987	1997
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014542	chr2	+	junction_3	32852685	32852996	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6523	2183	2196	2144
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014542	chr2	+	junction_4	32853079	32853508	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6841	2303	2340	2198
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014542	chr2	+	junction_5	32853596	32853752	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6551	2246	2210	2095
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014542	chr2	+	junction_6	32853866	32854002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2580	889	882	809
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014575	chr2	+	junction_1	34662459	34662570	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2466	817	893	756
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014575	chr2	+	junction_2	34662803	34663181	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2444	786	940	718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014575	chr2	+	junction_3	34663320	34663832	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2314	737	881	696
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014575	chr2	+	junction_4	34663946	34664039	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2789	881	1019	889
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014575	chr2	+	junction_5	34664431	34664546	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2476	828	864	784
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014575	chr2	+	junction_6	34664785	34665077	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2985	991	1068	926
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014575	chr2	+	junction_7	34665246	34665562	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2729	870	981	878
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014584	chr2	-	junction_1	34669542	34670608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	443	152	139	152
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014584	chr2	-	junction_2	34670759	34674557	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	471	152	170	149
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014584	chr2	-	junction_3	34674708	34675578	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	388	127	124	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014584	chr2	-	junction_4	34675741	34680514	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	358	119	111	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014584	chr2	-	junction_5	34680668	34685183	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	393	120	141	132
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014584	chr2	-	junction_6	34685342	34687386	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	381	125	115	141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014768	chr2	+	junction_1	72306656	72309249	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1379	450	508	421
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014768	chr2	+	junction_2	72309373	72312034	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1368	474	496	398
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014768	chr2	+	junction_3	72312293	72312772	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1115	356	395	364
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014768	chr2	+	junction_4	72312857	72313698	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1175	397	411	367
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014768	chr2	+	junction_5	72313906	72314222	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1194	379	434	381
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014768	chr2	+	junction_6	72314361	72314942	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1215	384	459	372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014768	chr2	+	junction_7	72315093	72315519	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1285	408	475	402
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014768	chr2	+	junction_8	72315657	72316063	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1220	422	429	369
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014799	chr2	-	junction_1	73739052	73739527	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4118	1455	1383	1280
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014799	chr2	-	junction_2	73739722	73740203	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014799	chr2	-	junction_3	73740286	73741298	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4307	1471	1425	1411
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014800	chr2	-	junction_1	73739052	73739527	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4118	1455	1383	1280
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014800	chr2	-	junction_2	73739722	73740207	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4528	1553	1508	1467
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014800	chr2	-	junction_3	73740286	73741298	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4307	1471	1425	1411
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014800	chr2	-	junction_4	73741401	73741595	?????	novel	novel	known	-4	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	42	0	42	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014879	chr2	-	junction_1	84499742	84500330	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1785	612	612	561
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014879	chr2	-	junction_2	84500461	84500588	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2216	774	763	679
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014879	chr2	-	junction_3	84500735	84500826	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2438	796	872	770
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_1	90884677	90884919	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1724	553	582	589
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_2	90885004	90885323	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1927	603	639	685
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_3	90885450	90885802	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1871	634	583	654
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_4	90885908	90885992	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2059	679	676	704
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_5	90886056	90886249	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1853	655	553	645
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_6	90886388	90887002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1842	634	600	608
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_7	90887147	90887256	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2071	769	620	682
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_8	90887406	90888109	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1960	674	649	637
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_9	90888207	90888354	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2039	739	616	684
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_10	90888501	90889390	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2116	743	687	686
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	junction_11	90889473	90889598	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1969	681	638	650
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014980	chr2	-	junction_1	91760461	91761162	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2823	956	997	870
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014980	chr2	-	junction_2	91761325	91761440	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2730	919	922	889
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014980	chr2	-	junction_3	91761595	91761716	?????	novel	novel	known	-5	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	184	71	54	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014980	chr2	-	junction_4	91761794	91762038	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1617	576	526	515
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_1	103598815	103599147	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2050	671	727	652
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_2	103599249	103599779	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1861	618	661	582
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_3	103599975	103602041	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1726	598	593	535
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_4	103602193	103603013	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1802	592	654	556
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_5	103603164	103603318	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1832	597	645	590
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_6	103603430	103604078	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1742	570	650	522
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_7	103604141	103605761	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1744	545	656	543
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_8	103605871	103605954	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1839	617	672	550
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_9	103606111	103606278	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1826	611	649	566
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_10	103606366	103606449	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2080	690	741	649
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_11	103606503	103608307	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1874	610	683	581
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_12	103608446	103609508	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1982	631	711	640
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_13	103609592	103609677	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1983	611	724	648
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_14	103609917	103613300	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1737	540	653	544
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_15	103613388	103613487	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1788	565	667	556
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_16	103613551	103627075	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1898	633	680	585
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	junction_17	103627286	103627807	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	761	251	261	249
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015120	chr2	+	junction_1	112323567	112344794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	582	183	224	175
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015120	chr2	+	junction_2	112344973	112455499	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	629	179	267	183
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015120	chr2	+	junction_3	112455571	112458093	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	614	188	250	176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015120	chr2	+	junction_4	112458190	112460084	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	555	193	229	133
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015120	chr2	+	junction_5	112460422	112461123	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	579	164	229	186
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015134	chr2	-	junction_1	118306789	118307307	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1430	476	488	466
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015134	chr2	-	junction_2	118307341	118309401	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1463	487	493	483
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015134	chr2	-	junction_3	118309515	118309858	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1497	529	482	486
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015134	chr2	-	junction_4	118309932	118310071	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1467	497	457	513
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	junction_1	119067954	119068181	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	163	69	44	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	junction_2	119068725	119075635	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	309	91	110	108
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	junction_3	119075764	119075990	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	297	87	104	106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	junction_4	119076130	119076217	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	301	108	87	106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	junction_5	119076389	119076812	?????	novel	known	novel	0	27	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	junction_6	119076966	119077077	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	305	97	96	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	junction_7	119077129	119078491	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	327	109	112	106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	junction_8	119078663	119078836	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	293	99	103	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	junction_9	119078885	119079237	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	334	106	131	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015201	chr2	+	junction_1	119858058	119860538	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	85	31	31	23
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015201	chr2	+	junction_2	119860693	119860769	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	144	59	48	37
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015201	chr2	+	junction_3	119861024	119861296	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	129	41	42	46
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015201	chr2	+	junction_4	119861354	119861787	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	91	23	30	38
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015201	chr2	+	junction_5	119861884	119862321	?????	novel	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17	7	7	3
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015201	chr2	+	junction_6	119862482	119862594	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	169	58	53	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015220	chr2	+	junction_1	120440027	120442818	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	264	97	78	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015220	chr2	+	junction_2	120442912	120443531	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	158	58	50	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015220	chr2	+	junction_3	120443602	120446335	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	214	84	74	56
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015220	chr2	+	junction_4	120446469	120448353	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	306	114	104	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015220	chr2	+	junction_5	120448463	120449455	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	292	115	92	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015273	chr2	-	junction_1	122180021	122184245	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	151	47	57	47
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015273	chr2	-	junction_2	122184366	122184509	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	69	17	28	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015273	chr2	-	junction_3	122184679	122187563	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	92	26	41	25
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015273	chr2	-	junction_4	122187771	122189928	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	123	35	45	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015273	chr2	-	junction_5	122190071	122199127	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	75	22	36	17
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_1	130116397	130116553	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1993	604	716	673
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_2	130116644	130116951	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2502	797	860	845
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_3	130117067	130117582	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2667	872	908	887
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_4	130117745	130117895	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2634	878	915	841
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_5	130118095	130118355	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2327	786	778	763
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_6	130118544	130118626	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2369	809	786	774
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_7	130118779	130118951	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2205	788	693	724
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_8	130119053	130119395	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2237	753	754	730
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_9	130119545	130119768	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1876	631	589	656
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_10	130119891	130120075	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2414	823	755	836
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	junction_11	130120211	130120816	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2327	776	706	845
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015405	chr2	+	junction_1	130119235	130119395	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	132	32	51	49
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015405	chr2	+	junction_2	130119545	130119768	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1876	631	589	656
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015405	chr2	+	junction_3	130119891	130120075	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2414	823	755	836
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015405	chr2	+	junction_4	130120211	130120816	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2327	776	706	845
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015406	chr2	+	junction_1	130119235	130119395	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	132	32	51	49
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015406	chr2	+	junction_2	130119545	130119768	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1876	631	589	656
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015406	chr2	+	junction_3	130119891	130120075	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2414	823	755	836
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015406	chr2	+	junction_4	130120206	130120816	?????	novel	novel	known	-5	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_1	130121647	130122182	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	839	274	282	283
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_2	130122244	130122376	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	872	282	293	297
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_3	130122472	130122875	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	805	250	264	291
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_4	130123023	130123132	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	750	245	246	259
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_5	130123236	130123326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	753	255	239	259
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_6	130123461	130123557	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	745	249	241	255
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_7	130123691	130123767	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	799	260	274	265
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_8	130123829	130125628	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	792	251	284	257
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_9	130125750	130125857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	901	274	351	276
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_10	130125957	130126090	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	846	276	311	259
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	junction_11	130126169	130126301	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	782	246	286	250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015472	chr2	-	junction_1	132091616	132091693	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1968	694	609	665
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015472	chr2	-	junction_2	132091818	132093247	?????	novel	known	novel	0	-84	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	210	72	74	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015472	chr2	-	junction_3	132093359	132093610	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2520	832	873	815
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015472	chr2	-	junction_4	132093679	132093822	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2404	803	820	781
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015472	chr2	-	junction_5	132093921	132094735	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2527	854	899	774
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015478	chr2	-	junction_1	132093359	132093610	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2520	832	873	815
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015478	chr2	-	junction_2	132093679	132093822	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2404	803	820	781
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015478	chr2	-	junction_3	132093921	132094735	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2527	854	899	774
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015483	chr2	+	junction_1	132534052	132592132	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	78	26	26	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015502	chr2	+	junction_1	135490892	135491052	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	692	256	207	229
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015502	chr2	+	junction_2	135491123	135493733	?????	novel	known	novel	0	33	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015535	chr2	+	junction_1	143757568	143780304	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1678	534	626	518
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015535	chr2	+	junction_2	143780610	143781871	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015535	chr2	+	junction_3	143781949	143784046	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1510	506	537	467
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015642	chr2	+	junction_1	151947868	151950908	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	134	47	44	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015645	chr2	+	junction_1	151986059	151990615	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	131	38	48	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015666	chr2	+	junction_1	152578666	152578891	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	30	5	12	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015866	chr2	+	junction_1	158610508	158621764	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	320	116	96	108
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015866	chr2	+	junction_2	158621933	158625052	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	312	116	98	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015866	chr2	+	junction_3	158625178	158627079	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	282	88	93	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016018	chr2	+	junction_1	167345522	167348966	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	657	223	222	212
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016018	chr2	+	junction_2	167349118	167352795	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	578	179	209	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016018	chr2	+	junction_3	167352903	167353131	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	624	205	222	197
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016018	chr2	+	junction_4	167353247	167354436	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	635	201	228	206
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016018	chr2	+	junction_5	167354545	167356585	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	580	191	203	186
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016222	chr2	+	junction_1	179899241	179899392	?????	novel	known	novel	0	21	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	45	14	16	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016222	chr2	+	junction_2	179899477	179899580	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7682	2594	2676	2412
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016222	chr2	+	junction_3	179899645	179899778	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7439	2527	2580	2332
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016222	chr2	+	junction_4	179899851	179900022	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6704	2312	2332	2060
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016222	chr2	+	junction_5	179900079	179900170	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3954	1321	1354	1279
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016344	chr3	-	junction_1	14671469	14672236	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5431	1836	1812	1783
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016344	chr3	-	junction_2	14672354	14674600	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5271	1742	1815	1714
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016344	chr3	-	junction_3	14674718	14676269	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4849	1537	1698	1614
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016347	chr3	+	junction_1	14706906	14710096	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	138	41	54	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016347	chr3	+	junction_2	14710295	14715718	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	137	49	49	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016347	chr3	+	junction_3	14715838	14719943	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	128	49	31	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016347	chr3	+	junction_4	14720040	14721288	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	101	40	29	32
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016347	chr3	+	junction_5	14721352	14721968	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	117	43	38	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016347	chr3	+	junction_6	14722125	14726514	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	152	51	48	53
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016434	chr3	+	junction_1	32791355	32799002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2813	986	913	914
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016434	chr3	+	junction_2	32799092	32800596	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3001	1009	988	1004
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016434	chr3	+	junction_3	32800664	32801876	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2854	1012	943	899
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016434	chr3	+	junction_4	32801939	32802609	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2915	1053	994	868
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016434	chr3	+	junction_5	32802717	32805177	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2950	1038	937	975
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_1	34074313	34093675	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1209	373	437	399
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_2	34093729	34095211	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1213	373	446	394
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_3	34095306	34100180	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1400	438	495	467
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_4	34100253	34100585	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1275	413	464	398
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_5	34100735	34101114	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1271	406	464	401
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_6	34101209	34101780	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1177	344	458	375
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_7	34101898	34103301	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1060	350	383	327
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_8	34103473	34104223	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1201	399	428	374
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_9	34104303	34108370	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1097	331	425	341
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_10	34108481	34110478	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1208	369	419	420
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_11	34110566	34112172	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1252	402	438	412
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_12	34112231	34112317	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1188	391	427	370
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_13	34112381	34115976	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1145	387	397	361
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	junction_14	34116181	34118267	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1240	422	434	384
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_1	41510255	41535629	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	796	282	277	237
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_2	41535708	41543368	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	773	260	279	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_3	41543458	41546117	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	880	280	317	283
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_4	41546276	41548201	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	858	315	313	230
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_5	41548390	41551049	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	734	240	271	223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_6	41551262	41554456	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	744	268	250	226
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_7	41554625	41555801	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	683	234	244	205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_8	41555919	41558904	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	798	264	293	241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_9	41559427	41564237	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	776	265	277	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	junction_10	41564356	41567557	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	791	262	276	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_1	68912424	68913408	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	643	230	205	208
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_2	68913547	68914521	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	708	216	237	255
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_3	68914701	68915261	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	521	178	168	175
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_4	68915454	68916816	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	675	228	222	225
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_5	68916994	68923425	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	674	209	247	218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_6	68923591	68923984	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	700	240	240	220
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_7	68924113	68925403	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	653	219	213	221
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_8	68925545	68926507	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	577	182	194	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_9	68926659	68928568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	649	213	222	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_10	68928734	68929558	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	618	204	205	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_11	68929793	68931497	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	589	193	212	184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_12	68931684	68933156	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	674	217	229	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_13	68933319	68934825	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	727	248	247	232
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_14	68935052	68935151	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	830	281	284	265
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_15	68935232	68935777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	837	294	292	251
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_16	68935931	68936733	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1063	379	346	338
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_17	68936861	68937575	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	791	258	259	274
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_18	68937766	68938740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	677	255	230	192
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_19	68938886	68939069	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	946	281	347	318
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_20	68939244	68940039	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	830	271	302	257
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_21	68940223	68940358	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	774	274	250	250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_22	68940592	68941270	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	968	322	310	336
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	junction_23	68941455	68941706	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1022	359	361	302
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016619	chr3	-	junction_1	75424909	75428008	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1269	449	371	449
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016619	chr3	-	junction_2	75428092	75428337	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1395	486	421	488
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016619	chr3	-	junction_3	75428417	75434894	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1188	414	382	392
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016619	chr3	-	junction_4	75435022	75436116	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1446	480	460	506
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016619	chr3	-	junction_5	75436235	75440847	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1530	487	510	533
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016619	chr3	-	junction_6	75440902	75448466	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1566	507	532	527
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016619	chr3	-	junction_7	75448686	75464028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1445	482	452	511
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016647	chr3	-	junction_1	86045418	86045789	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6820	2284	2283	2253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016647	chr3	-	junction_2	86045900	86046346	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3673	1243	1188	1242
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016647	chr3	-	junction_3	86046556	86048545	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9125	3047	3055	3023
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016647	chr3	-	junction_4	86048734	86049000	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016647	chr3	-	junction_5	86049109	86049814	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10966	3694	3705	3567
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016702	chr3	+	junction_1	88232509	88232983	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1124	367	374	383
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016702	chr3	+	junction_2	88233239	88233421	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	983	319	357	307
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016702	chr3	+	junction_3	88233620	88233717	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	949	318	334	297
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016702	chr3	+	junction_4	88233937	88235163	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	936	319	316	301
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016702	chr3	+	junction_5	88235421	88235509	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1007	320	347	340
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016772	chr3	-	junction_1	89001148	89001537	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	2	39	20	0	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016772	chr3	-	junction_2	89001673	89001758	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2452	796	823	833
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016772	chr3	-	junction_3	89001833	89002166	?????	novel	novel	known	-4	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	99	99	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016772	chr3	-	junction_4	89002240	89002320	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2489	777	905	807
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016772	chr3	-	junction_5	89002410	89002660	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2243	741	784	718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016772	chr3	-	junction_6	89002784	89002905	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2284	733	823	728
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016772	chr3	-	junction_7	89002987	89006606	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2351	771	811	769
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016772	chr3	-	junction_8	89006748	89007975	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2238	721	776	741
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016776	chr3	-	junction_1	89001151	89001537	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2209	743	747	719
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016776	chr3	-	junction_2	89001673	89001758	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2452	796	823	833
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016776	chr3	-	junction_3	89001833	89002166	?????	novel	novel	known	-4	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	99	99	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016776	chr3	-	junction_4	89002240	89002320	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2489	777	905	807
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016776	chr3	-	junction_5	89002410	89002660	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2243	741	784	718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016776	chr3	-	junction_6	89002784	89002905	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2284	733	823	728
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016776	chr3	-	junction_7	89002987	89006606	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2351	771	811	769
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016776	chr3	-	junction_8	89006748	89007975	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2238	721	776	741
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016777	chr3	-	junction_1	89001151	89001537	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2209	743	747	719
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016777	chr3	-	junction_2	89001673	89001758	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2452	796	823	833
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016777	chr3	-	junction_3	89001837	89002173	?????	novel	known	novel	0	-7	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016777	chr3	-	junction_4	89002240	89002320	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2489	777	905	807
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016777	chr3	-	junction_5	89002410	89002660	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2243	741	784	718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016777	chr3	-	junction_6	89002784	89002905	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2284	733	823	728
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016777	chr3	-	junction_7	89002987	89006606	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2351	771	811	769
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016777	chr3	-	junction_8	89006748	89007975	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2238	721	776	741
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016871	chr3	+	junction_1	90155567	90156252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	126	52	41	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016871	chr3	+	junction_2	90156471	90156632	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	147	41	62	44
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016871	chr3	+	junction_3	90156764	90158992	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	138	41	54	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016879	chr3	-	junction_1	90358490	90358612	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	173	58	63	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016879	chr3	-	junction_2	90358705	90362124	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	97	36	34	27
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016903	chr3	-	junction_1	90418672	90419302	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	340	121	92	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016903	chr3	-	junction_2	90419457	90421507	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	383	126	115	142
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_1	95467044	95468538	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	239	73	74	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_2	95468592	95469790	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	331	114	117	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_3	95469936	95473931	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	292	93	97	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_4	95473996	95474994	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	305	111	99	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_5	95475032	95482803	?????	novel	known	novel	0	42	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_6	95482914	95483587	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	337	129	103	105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_7	95483740	95485363	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	399	126	147	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_8	95485612	95487315	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	294	96	91	107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_9	95487383	95487468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	322	114	93	115
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_10	95487546	95488817	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	333	126	91	116
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_11	95488902	95492450	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	304	102	102	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	junction_12	95492526	95494691	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	219	62	76	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_1	101483901	101484234	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	485	126	219	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_2	101484327	101486309	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	413	109	187	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_3	101486412	101486836	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	424	130	181	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_4	101486968	101487089	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	435	132	205	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_5	101487236	101488462	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	343	114	157	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_6	101488587	101489040	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	330	93	160	77
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_7	101489196	101489317	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	351	117	151	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_8	101489487	101490003	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	324	85	152	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_9	101490155	101491060	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	374	117	159	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_10	101491198	101492038	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	397	123	174	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_11	101492215	101493442	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	313	92	131	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_12	101493636	101494131	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	330	109	135	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_13	101494267	101496321	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	356	104	161	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_14	101496432	101497082	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	356	105	162	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_15	101497282	101497762	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	352	104	157	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_16	101498032	101498436	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	342	87	154	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_17	101498555	101498655	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	297	88	123	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_18	101498791	101499096	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	326	86	141	99
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_19	101499211	101499693	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	344	78	165	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_20	101499898	101501518	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	317	86	147	84
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_21	101501579	101502313	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	360	110	163	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	junction_22	101502425	101511718	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	352	101	166	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_1	105587029	105587659	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	289	88	118	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_2	105587762	105587865	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	276	83	105	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_3	105587972	105588296	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	297	112	110	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_4	105588380	105590041	?????	known	known	known	0	0	FALSE	GCAG	canonical	FALSE	NA	NA	NA	3	286	98	105	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_5	105590101	105590192	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	99	86	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_6	105590332	105590468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	316	109	128	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_7	105590612	105590731	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	322	118	100	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_8	105590847	105591600	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	287	103	101	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_9	105591770	105593954	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	325	125	107	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	junction_10	105594050	105594439	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	347	122	117	108
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_1	107520783	107521910	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	190	68	53	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_2	107522116	107522630	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	175	65	52	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_3	107522736	107523076	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	198	81	65	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_4	107523144	107523823	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	201	75	55	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_5	107523925	107524127	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	209	79	60	70
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_6	107524255	107525373	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	175	54	69	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_7	107525472	107525631	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	253	96	83	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_8	107525707	107526226	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	235	86	78	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_9	107526299	107527355	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	214	73	76	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_10	107527420	107527524	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	177	62	60	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_11	107527591	107528642	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	206	70	74	62
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_12	107528861	107529187	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	201	60	64	77
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_13	107529371	107531702	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	225	78	66	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_14	107531831	107531940	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	202	74	68	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_15	107532048	107532996	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	232	80	74	78
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_16	107533066	107534051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	217	67	71	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_17	107534173	107534260	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	217	57	87	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_18	107534396	107534703	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	213	69	78	66
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_19	107534779	107535471	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	227	81	69	77
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	junction_20	107535542	107538816	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	268	105	71	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017176	chr3	-	junction_1	107889455	107891251	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	637	226	196	215
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017176	chr3	-	junction_2	107891363	107891444	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	747	288	223	236
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017176	chr3	-	junction_3	107891541	107892364	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	657	254	191	212
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017176	chr3	-	junction_4	107892466	107892562	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	655	233	181	241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017176	chr3	-	junction_5	107892645	107892933	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	663	230	197	236
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017176	chr3	-	junction_6	107892999	107893349	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	626	233	191	202
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017176	chr3	-	junction_7	107893426	107893673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	715	258	212	245
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_1	108587120	108589321	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	130	42	48	40
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_2	108589540	108589987	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	130	58	37	35
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_3	108590142	108594135	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	121	41	39	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_4	108594316	108597081	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	97	30	33	34
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_5	108597153	108604264	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	117	33	45	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_6	108604395	108604843	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	95	31	23	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_7	108604953	108606233	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	102	42	29	31
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_8	108606390	108607979	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	98	36	26	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_9	108608096	108608202	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	113	47	30	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_10	108608327	108609060	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	108	43	32	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_11	108609204	108609714	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	123	41	46	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_12	108609851	108610180	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	119	45	38	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_13	108610403	108618592	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	74	29	20	25
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	junction_14	108618897	108629356	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	65	28	20	17
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017223	chr3	+	junction_1	115681927	115682088	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	271	90	86	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017223	chr3	+	junction_2	115682247	115686360	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	293	95	103	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017223	chr3	+	junction_3	115686486	115693343	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	288	96	101	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017223	chr3	+	junction_4	115693453	115708688	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	265	91	80	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017223	chr3	+	junction_5	115708810	115718860	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	262	92	79	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017223	chr3	+	junction_6	115718901	115720345	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	254	95	79	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017223	chr3	+	junction_7	115720450	115722157	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	272	86	101	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017223	chr3	+	junction_8	115722405	115722480	?????	novel	novel	novel	1955	-323	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017246	chr3	+	junction_1	121085633	121092252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	72	31	26	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017246	chr3	+	junction_2	121092408	121113728	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	80	23	28	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017246	chr3	+	junction_3	121113861	121155204	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	106	43	39	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017304	chr3	+	junction_1	129551788	129555287	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	92	31	24	37
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017391	chr3	+	junction_1	137624425	137624633	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	247	87	75	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017391	chr3	+	junction_2	137624680	137625681	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	173	67	22	84
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017391	chr3	+	junction_3	137625717	137630872	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	124	53	17	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017391	chr3	+	junction_4	137630932	137632569	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	274	98	89	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017391	chr3	+	junction_5	137632704	137633107	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	316	108	105	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017391	chr3	+	junction_6	137633172	137633707	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	327	110	110	107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017478	chr3	-	junction_1	152911229	152912254	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	111	41	41	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017482	chr3	-	junction_1	153613379	153613691	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1082	365	357	360
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017482	chr3	-	junction_2	153613842	153614426	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1001	335	335	331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017482	chr3	-	junction_3	153614553	153614985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	607	220	200	187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017482	chr3	-	junction_4	153615097	153615182	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	868	286	322	260
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017482	chr3	-	junction_5	153615236	153615897	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	355	129	119	107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017482	chr3	-	junction_6	153616004	153616327	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	938	319	329	290
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017482	chr3	-	junction_7	153616526	153617561	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	910	297	332	281
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017484	chr3	-	junction_1	153613379	153613691	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1082	365	357	360
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017484	chr3	-	junction_2	153613842	153614426	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1001	335	335	331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017484	chr3	-	junction_3	153614553	153614985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	607	220	200	187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017484	chr3	-	junction_4	153615097	153615182	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	868	286	322	260
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017484	chr3	-	junction_5	153615236	153615700	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	638	199	239	200
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017484	chr3	-	junction_6	153615799	153615897	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	688	243	223	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017484	chr3	-	junction_7	153616004	153616327	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	938	319	329	290
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017484	chr3	-	junction_8	153616526	153617561	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	910	297	332	281
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017508	chr3	+	junction_1	154310653	154312015	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	173	66	53	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017508	chr3	+	junction_2	154312169	154317046	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	182	52	67	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017508	chr3	+	junction_3	154317211	154319458	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	207	69	53	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017508	chr3	+	junction_4	154319511	154324096	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	219	72	58	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017508	chr3	+	junction_5	154324247	154327117	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	156	48	41	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017508	chr3	+	junction_6	154327226	154327315	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	160	44	53	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017508	chr3	+	junction_7	154327412	154327736	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017543	chr4	-	junction_1	3834684	3834935	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8316	2830	2776	2710
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017543	chr4	-	junction_2	3835010	3835191	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6653	2215	2221	2217
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017543	chr4	-	junction_3	3835292	3835478	?????	novel	known	novel	0	5	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	48	15	18	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017568	chr4	-	junction_1	8146217	8169595	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	34	11	10	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017568	chr4	-	junction_2	8169766	8183252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	29	10	9	10
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017568	chr4	-	junction_3	8183366	8184583	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	32	15	11	6
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017568	chr4	-	junction_4	8184633	8185575	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	37	15	12	10
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017568	chr4	-	junction_5	8185639	8189296	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	31	10	11	10
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017568	chr4	-	junction_6	8189393	8221549	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	33	15	7	11
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017568	chr4	-	junction_7	8221675	8237918	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	35	16	8	11
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017568	chr4	-	junction_8	8238111	8238851	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	32	16	7	9
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017586	chr4	-	junction_1	11052064	11053431	?????	novel	novel	known	838	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	49	13	18	18
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017586	chr4	-	junction_2	11053489	11059011	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	345	112	116	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017586	chr4	-	junction_3	11059114	11060860	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	412	152	142	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017586	chr4	-	junction_4	11060995	11062049	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	356	137	118	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017586	chr4	-	junction_5	11062153	11066650	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	272	91	84	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017586	chr4	-	junction_6	11066708	11070199	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	262	94	84	84
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017586	chr4	-	junction_7	11070323	11073139	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	35	12	11	12
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017586	chr4	-	junction_8	11073244	11075979	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	372	122	126	124
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017603	chr4	+	junction_1	12232839	12232904	?????	novel	novel	novel	-38678	-61207	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	4269	1268	1825	1176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017648	chr4	+	junction_1	24898677	24901693	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	446	161	146	139
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017730	chr4	-	junction_1	41093703	41093781	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1694	528	648	518
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017730	chr4	-	junction_2	41094000	41094265	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2044	617	805	622
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017730	chr4	-	junction_3	41094385	41094700	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2054	613	807	634
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017730	chr4	-	junction_4	41094839	41095144	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1912	564	772	576
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017730	chr4	-	junction_5	41095272	41098001	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1957	600	782	575
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017745	chr4	+	junction_1	41465181	41477513	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	137	45	52	40
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017745	chr4	+	junction_2	41477648	41480245	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	190	53	59	78
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017747	chr4	-	junction_1	41499691	41502990	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	158	51	58	49
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017801	chr4	-	junction_1	43654412	43654512	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	745	257	236	252
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017801	chr4	-	junction_2	43654586	43654715	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	704	242	239	223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017801	chr4	-	junction_3	43654821	43654905	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	693	214	255	224
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017801	chr4	-	junction_4	43655047	43656358	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	751	267	249	235
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017814	chr4	+	junction_1	44013009	44018812	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1242	385	446	411
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017814	chr4	+	junction_2	44018851	44019876	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	8	8	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017814	chr4	+	junction_3	44019992	44025448	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1274	428	437	409
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017814	chr4	+	junction_4	44025561	44032400	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1431	485	502	444
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017912	chr4	+	junction_1	53012048	53015014	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	607	229	206	172
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017912	chr4	+	junction_2	53015226	53017048	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	528	189	164	175
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017912	chr4	+	junction_3	53017208	53020181	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	527	185	182	160
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017912	chr4	+	junction_4	53020332	53021110	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	567	194	194	179
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017912	chr4	+	junction_5	53021198	53021283	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	592	213	189	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017926	chr4	-	junction_1	55528301	55529717	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1256	428	444	384
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017926	chr4	-	junction_2	55529883	55529998	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1140	348	433	359
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017926	chr4	-	junction_3	55530984	55531629	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1311	387	527	397
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017926	chr4	-	junction_4	55531751	55531866	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1236	379	471	386
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_1	62427548	62428341	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	554	201	189	164
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_2	62428472	62428751	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	669	232	213	224
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_3	62428839	62428930	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	700	258	228	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_4	62429019	62429104	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	643	237	212	194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_5	62429161	62429760	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	583	201	176	206
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_6	62429850	62429938	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	657	222	212	223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_7	62430023	62430123	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	681	231	215	235
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_8	62430260	62431107	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	667	233	205	229
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_9	62431205	62431768	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	719	265	219	235
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_10	62431820	62432310	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	661	226	226	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	junction_11	62432498	62438096	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	645	244	187	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018129	chr4	+	junction_1	107036115	107042974	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1619	570	542	507
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018129	chr4	+	junction_2	107043081	107044815	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1542	561	487	494
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018129	chr4	+	junction_3	107044911	107047731	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1880	654	601	625
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018129	chr4	+	junction_4	107047885	107049658	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1612	508	532	572
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018129	chr4	+	junction_5	107049741	107050495	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1513	496	474	543
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018129	chr4	+	junction_6	107050578	107054702	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1653	574	506	573
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018129	chr4	+	junction_7	107054812	107057564	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1702	618	520	564
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_1	115705560	115714228	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	170	61	51	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_2	115714331	115717216	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	195	80	62	53
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_3	115717315	115720173	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	172	65	50	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_4	115720254	115721735	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	171	58	52	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_5	115721810	115723658	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	161	53	56	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_6	115723764	115727507	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	164	58	63	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_7	115727564	115730407	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	139	42	52	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_8	115730504	115731816	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	126	39	49	38
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_9	115732012	115732577	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	165	55	52	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_10	115732743	115733777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	134	41	41	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	junction_11	115733822	115735146	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	106	34	28	44
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018333	chr4	-	junction_1	117741839	117742300	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2592	902	829	861
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018333	chr4	-	junction_2	117742492	117742825	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2551	885	839	827
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018333	chr4	-	junction_3	117742878	117743000	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2536	873	847	816
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018333	chr4	-	junction_4	117743071	117743264	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2773	958	900	915
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018333	chr4	-	junction_5	117743343	117743472	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2551	890	837	824
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018333	chr4	-	junction_6	117743557	117743786	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2659	893	890	876
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018333	chr4	-	junction_7	117743836	117744366	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2123	728	708	687
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018392	chr4	-	junction_1	119135565	119136130	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10943	3561	3758	3624
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018392	chr4	-	junction_2	119136397	119138766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9851	3236	3378	3237
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018392	chr4	-	junction_3	119138850	119139342	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10469	3381	3587	3501
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018392	chr4	-	junction_4	119139646	119139977	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10134	3393	3367	3374
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018392	chr4	-	junction_5	119140068	119150925	?????	novel	known	novel	0	13	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018392	chr4	-	junction_6	119151003	119151400	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10083	3442	3360	3281
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018543	chr4	-	junction_1	126210659	126211095	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	330	105	122	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018543	chr4	-	junction_2	126211197	126211512	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	306	95	112	99
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018543	chr4	-	junction_3	126211698	126211776	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	286	101	98	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018543	chr4	-	junction_4	126211985	126212191	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	390	122	144	124
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018543	chr4	-	junction_5	126212289	126215234	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	386	116	158	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018552	chr4	+	junction_1	126571639	126577914	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3584	1256	1122	1206
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018552	chr4	+	junction_2	126578038	126580821	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3615	1248	1121	1246
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018552	chr4	+	junction_3	126580893	126599850	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3349	1176	1015	1158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018552	chr4	+	junction_4	126600043	126603271	?????	novel	novel	known	29	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018568	chr4	-	junction_1	126943700	126944356	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	411	138	140	133
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018568	chr4	-	junction_2	126944395	126944536	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	431	142	152	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018568	chr4	-	junction_3	126944666	126945067	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	404	145	132	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018568	chr4	-	junction_4	126945219	126948000	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	422	151	141	130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018568	chr4	-	junction_5	126948176	126952585	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	391	132	123	136
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018568	chr4	-	junction_6	126952825	126953302	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	376	137	132	107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018568	chr4	-	junction_7	126953453	126954788	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	465	158	166	141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018571	chr4	+	junction_1	127019987	127021611	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	105	42	33	30
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018571	chr4	+	junction_2	127021793	127022646	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	98	33	31	34
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018643	chr4	+	junction_1	129407714	129408509	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_1	129410430	129410692	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1544	460	548	536
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_2	129410742	129411148	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1733	511	607	615
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_3	129411302	129411585	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1850	614	663	573
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_4	129411717	129411805	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1791	611	614	566
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_5	129411915	129412623	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1776	620	590	566
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_6	129412765	129412844	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2037	711	677	649
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_7	129412954	129415210	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2054	731	672	651
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_8	129415304	129416155	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1958	704	649	605
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_9	129416298	129416755	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1876	637	639	600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_10	129416895	129418038	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1463	468	495	500
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_11	129418114	129422719	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1644	536	543	565
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_12	129422838	129428406	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2161	668	755	738
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	junction_13	129428520	129436373	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2050	645	696	709
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018684	chr4	+	junction_1	130001444	130014960	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	185	65	62	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018684	chr4	+	junction_2	130015235	130018855	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	241	84	86	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018684	chr4	+	junction_3	130019012	130019446	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	218	65	85	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018684	chr4	+	junction_4	130019591	130021045	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	250	86	99	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_1	130059999	130060095	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	281	95	89	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_2	130060142	130060694	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	282	100	99	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_3	130060819	130061048	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	94	87	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_4	130061095	130061197	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	241	73	77	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_5	130061388	130061490	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	237	90	68	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_6	130061642	130061722	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	223	68	84	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_7	130061847	130062811	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	247	74	96	77
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_8	130062927	130063103	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	239	73	79	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_9	130063197	130066724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	205	68	63	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_10	130066789	130067685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	242	83	81	78
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	junction_11	130068001	130068515	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	185	61	54	70
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018717	chr4	+	junction_1	132001799	132010104	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	503	157	153	193
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018717	chr4	+	junction_2	132010357	132012354	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	534	178	176	180
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018717	chr4	+	junction_3	132012433	132016625	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	439	146	138	155
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018717	chr4	+	junction_4	132016741	132019173	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	510	184	138	188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018717	chr4	+	junction_5	132019263	132019937	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	473	165	143	165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018728	chr4	-	junction_1	132039318	132041303	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	560	197	194	169
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018728	chr4	-	junction_2	132041338	132041515	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	544	182	185	177
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018728	chr4	-	junction_3	132041679	132046765	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	478	187	158	133
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018728	chr4	-	junction_4	132046886	132048989	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	536	189	168	179
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018728	chr4	-	junction_5	132049122	132052518	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	518	167	186	165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018728	chr4	-	junction_6	132052572	132053256	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	478	164	161	153
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018728	chr4	-	junction_7	132053357	132055779	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	457	144	143	170
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018728	chr4	-	junction_8	132055878	132056663	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	451	159	126	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018739	chr4	-	junction_1	132080010	132080907	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1001	320	357	324
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018753	chr4	+	junction_1	132262975	132265497	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3302	1174	1088	1040
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018753	chr4	+	junction_2	132265600	132269092	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3072	1069	1024	979
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018753	chr4	+	junction_3	132269150	132271366	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3189	1095	1082	1012
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018753	chr4	+	junction_4	132271434	132271967	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2894	971	1009	914
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018753	chr4	+	junction_5	132272063	132273947	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3419	1173	1171	1075
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018753	chr4	+	junction_6	132274020	132277687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3069	1032	1060	977
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018753	chr4	+	junction_7	132277780	132278845	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2812	923	917	972
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018753	chr4	+	junction_8	132278922	132280327	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	2684	853	910	921
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018772	chr4	-	junction_1	132628620	132629313	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	120	40	44	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018772	chr4	-	junction_2	132629416	132631208	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	118	41	39	38
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018772	chr4	-	junction_3	132631345	132640979	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	35	11	15	9
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018772	chr4	-	junction_4	132641138	132643429	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	116	31	49	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018772	chr4	-	junction_5	132643583	132645032	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	142	49	53	40
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018772	chr4	-	junction_6	132645088	132648037	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	127	54	41	32
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018772	chr4	-	junction_7	132648103	132649668	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	108	43	39	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018776	chr4	-	junction_1	132994233	132995506	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	766	252	260	254
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018776	chr4	-	junction_2	132995638	132995719	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	795	256	246	293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018776	chr4	-	junction_3	132995817	132997088	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	819	264	272	283
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018776	chr4	-	junction_4	132997121	132998273	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	666	214	223	229
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018776	chr4	-	junction_5	132998359	133004841	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	744	250	238	256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018803	chr4	-	junction_1	133692885	133693261	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3214	1166	992	1056
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018803	chr4	-	junction_2	133693358	133693739	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2248	1013	641	594
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018803	chr4	-	junction_3	133693791	133694076	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1307	898	220	189
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018803	chr4	-	junction_4	133694107	133694267	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1835	900	456	479
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018803	chr4	-	junction_5	133694313	133695105	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2620	1113	737	770
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018844	chr4	+	junction_1	134651079	134651185	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	860	262	328	270
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018844	chr4	+	junction_2	134651794	134652603	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	813	253	294	266
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018844	chr4	+	junction_3	134652744	134654045	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	162	43	68	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018844	chr4	+	junction_4	134654130	134654241	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	913	276	352	285
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018893	chr4	-	junction_1	135777328	135777590	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	383	113	133	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018893	chr4	-	junction_2	135777702	135778481	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9166	2974	3189	3003
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018893	chr4	-	junction_3	135778614	135778924	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10574	3442	3766	3366
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018893	chr4	-	junction_4	135779028	135779877	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	142	40	45	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_1	139350509	139361025	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	199	57	71	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_2	139361120	139361207	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	200	51	79	70
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_3	139361301	139361974	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	190	59	82	49
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_4	139362023	139362699	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	215	74	87	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_5	139362856	139364269	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	204	61	76	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_6	139364420	139364496	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	195	65	80	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_7	139364572	139365685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	219	67	81	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_8	139365874	139367923	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	229	91	79	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_9	139367998	139369387	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	227	80	79	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_10	139369585	139369824	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	223	80	79	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_11	139369873	139370700	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	246	90	80	76
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_12	139370854	139371422	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	257	90	96	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_13	139371545	139372289	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	269	74	123	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	junction_14	139372409	139375468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	214	72	68	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019053	chr4	-	junction_1	143712141	143714804	?????	novel	novel	novel	-6441	4699	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8	4	2	2
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019065	chr4	+	junction_1	145159152	145176036	?????	novel	novel	known	-14190	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	59	15	25	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019069	chr4	+	junction_1	145176277	145176361	?????	novel	novel	novel	1699	-325	FALSE	GTAG	canonical	TRUE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019129	chr4	+	junction_1	146289526	146291416	?????	novel	novel	novel	79980	-76491	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	621	230	178	213
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019129	chr4	+	junction_2	146291510	146312866	?????	novel	novel	novel	81964	-97941	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	45	17	15	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019129	chr4	+	junction_3	146312972	146317966	?????	novel	novel	novel	103426	-103041	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	152	46	45	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019161	chr4	+	junction_1	146500373	146502756	?????	novel	novel	novel	-33160	45205	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	234	88	74	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019161	chr4	+	junction_2	146502850	146508052	?????	novel	novel	novel	-30683	39909	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	86	31	20	35
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019161	chr4	+	junction_3	146508139	146547961	?????	novel	novel	known	-25394	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	28	12	9	7
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019161	chr4	+	junction_4	146548020	146548860	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	35	13	19	3
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019161	chr4	+	junction_5	146548988	146550437	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	806	261	304	241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019182	chr4	+	junction_1	146516986	146533486	?????	novel	novel	novel	-16547	14475	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	169	49	61	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019182	chr4	+	junction_2	146533533	146547961	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	343	120	123	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019182	chr4	+	junction_3	146548024	146548878	?????	novel	novel	novel	4	-18	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019182	chr4	+	junction_4	146548988	146550437	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	806	261	304	241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019262	chr4	-	junction_1	147840693	147842158	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	249	87	77	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019262	chr4	-	junction_2	147842286	147845677	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	191	60	75	56
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019262	chr4	-	junction_3	147845736	147891546	?????	novel	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	2	14	9	5	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019262	chr4	-	junction_4	147891641	147893775	?????	novel	known	novel	0	349	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16	7	5	4
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019291	chr4	-	junction_1	148230643	148230777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	782	258	276	248
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019291	chr4	-	junction_2	148230914	148231296	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	802	264	265	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019291	chr4	-	junction_3	148231393	148231751	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	794	247	304	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019291	chr4	-	junction_4	148231879	148233835	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	802	247	281	274
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019291	chr4	-	junction_5	148234124	148236070	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	164	54	57	53
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019294	chr4	-	junction_1	148230643	148230777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	782	258	276	248
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019294	chr4	-	junction_2	148230914	148231296	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	802	264	265	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019294	chr4	-	junction_3	148231393	148231751	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	794	247	304	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019294	chr4	-	junction_4	148231879	148233835	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	802	247	281	274
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019294	chr4	-	junction_5	148234124	148236469	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	230	69	75	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019308	chr4	+	junction_1	148676244	148676500	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3366	1160	1124	1082
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019308	chr4	+	junction_2	148676622	148676938	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3190	1056	1104	1030
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019308	chr4	+	junction_3	148677032	148677744	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3212	1132	1065	1015
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019308	chr4	+	junction_4	148677899	148678224	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3346	1114	1139	1093
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019308	chr4	+	junction_5	148678455	148678539	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3092	1026	1075	991
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019308	chr4	+	junction_6	148678663	148678743	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3072	1031	1081	960
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019314	chr4	-	junction_1	148701302	148702022	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	409	134	127	148
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019314	chr4	-	junction_2	148702163	148703130	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	168	67	50	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019314	chr4	-	junction_3	148703249	148703640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1125	340	422	363
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019314	chr4	-	junction_4	148703812	148705048	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1029	326	390	313
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019314	chr4	-	junction_5	148705190	148706405	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1098	334	429	335
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019314	chr4	-	junction_6	148706570	148709581	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1125	369	415	341
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019314	chr4	-	junction_7	148709834	148711137	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1096	341	390	365
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019316	chr4	-	junction_1	148701302	148702022	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	409	134	127	148
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019316	chr4	-	junction_2	148703249	148703640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1125	340	422	363
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019316	chr4	-	junction_3	148703812	148705048	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1029	326	390	313
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019316	chr4	-	junction_4	148705190	148706405	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1098	334	429	335
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019316	chr4	-	junction_5	148706570	148709581	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1125	369	415	341
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019316	chr4	-	junction_6	148709834	148711137	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1096	341	390	365
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019448	chr4	+	junction_1	152412043	152414460	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5802	1860	2032	1910
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019448	chr4	+	junction_2	152414569	152416716	?????	novel	novel	known	-17	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019451	chr4	+	junction_1	152412047	152414475	?????	novel	novel	novel	4	-12	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019451	chr4	+	junction_2	152414586	152416736	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5596	1767	1916	1913
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019455	chr4	+	junction_1	154041780	154044205	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	743	260	237	246
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019455	chr4	+	junction_2	154044320	154044987	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	847	285	295	267
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019455	chr4	+	junction_3	154045450	154045946	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	801	261	259	281
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_1	9016973	9018646	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	224	73	76	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_2	9018767	9018869	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	206	71	72	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_3	9018964	9019047	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	202	68	74	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_4	9019127	9019915	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	211	78	78	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_5	9020040	9023585	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	200	55	76	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_6	9023717	9023944	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	168	57	53	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_7	9024053	9024132	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	185	67	65	53
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_8	9024217	9026007	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	199	72	59	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_9	9026110	9027454	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	171	67	57	47
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_10	9027581	9028197	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	208	74	70	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_11	9028292	9033688	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	213	70	76	67
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_12	9033798	9037767	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	179	65	66	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_13	9037893	9038103	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	221	73	72	76
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_14	9038286	9039605	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	180	61	60	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_15	9039731	9043505	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	245	72	94	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	junction_16	9043642	9046451	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	234	69	86	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_1	24771002	24771476	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1634	549	550	535
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_2	24771681	24772181	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1625	581	536	508
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_3	24772311	24772498	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1465	531	465	469
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_4	24772562	24773202	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1572	555	517	500
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_5	24773314	24773564	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1642	597	518	527
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_6	24773655	24773735	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1440	529	455	456
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_7	24773856	24774068	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1600	534	533	533
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_8	24774165	24776141	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1363	479	444	440
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_9	24776245	24777000	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1422	508	467	447
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_10	24777097	24778419	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1505	498	509	498
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_11	24778775	24779164	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1474	490	516	468
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	junction_12	24779375	24781516	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	152	51	43	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019798	chr5	+	junction_1	31771966	31773724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1626	538	525	563
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019798	chr5	+	junction_2	31773832	31779720	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2333	822	776	735
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_1	33899957	33900985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	470	156	164	150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_2	33901125	33902359	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	467	157	170	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_3	33902548	33903583	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	409	145	135	129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_4	33903719	33904719	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	399	137	148	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_5	33904855	33905504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	417	143	158	116
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_6	33905646	33906085	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	357	98	145	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_7	33906218	33909835	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	350	124	124	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_8	33909956	33918066	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	324	100	124	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_9	33918271	33918923	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	340	115	122	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_10	33919062	33919802	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	368	137	105	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_11	33919947	33926704	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	345	110	115	120
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_12	33927156	33935951	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	432	143	150	139
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	junction_13	33936013	33939817	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	361	121	131	109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019882	chr5	-	junction_1	35250731	35252193	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	913	295	314	304
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019882	chr5	-	junction_2	35252368	35253319	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	75	30	25	20
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019882	chr5	-	junction_3	35253403	35254874	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	908	308	325	275
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019882	chr5	-	junction_4	35255034	35255496	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	837	287	275	275
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019882	chr5	-	junction_5	35255618	35256500	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	915	310	294	311
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019882	chr5	-	junction_6	35256623	35259738	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1047	369	329	349
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019882	chr5	-	junction_7	35259884	35262822	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	836	276	280	280
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_1	45650904	45652507	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2522	861	868	793
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_2	45652624	45654261	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2830	946	1015	869
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_3	45654317	45654670	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2702	859	978	865
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_4	45654777	45655775	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2454	774	856	824
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_5	45655936	45657744	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2266	767	788	711
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_6	45657910	45660721	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2394	803	833	758
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_7	45660881	45662064	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2555	854	874	827
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_8	45662190	45663515	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2639	858	926	855
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_9	45663605	45664448	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2558	809	891	858
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_10	45664552	45666779	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2705	897	957	851
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_11	45666860	45668449	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2651	879	939	833
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	junction_12	45668560	45669222	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2969	996	1051	922
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020018	chr5	-	junction_1	65545811	65545904	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	29	10	15	4
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020018	chr5	-	junction_2	65546023	65546413	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14645	4766	5049	4830
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020018	chr5	-	junction_3	65546495	65546820	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14208	4592	4906	4710
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020018	chr5	-	junction_4	65546954	65547730	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12167	3977	4071	4119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020018	chr5	-	junction_5	65547827	65548081	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12946	4224	4490	4232
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020018	chr5	-	junction_6	65548198	65548288	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9546	3151	3338	3057
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020021	chr5	-	junction_1	65546023	65546413	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14645	4766	5049	4830
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020021	chr5	-	junction_2	65546495	65546820	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14208	4592	4906	4710
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020021	chr5	-	junction_3	65546954	65547730	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12167	3977	4071	4119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020021	chr5	-	junction_4	65547827	65548081	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12946	4224	4490	4232
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020021	chr5	-	junction_5	65548198	65548288	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9546	3151	3338	3057
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020026	chr5	-	junction_1	65545785	65545904	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8565	2779	2942	2844
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020026	chr5	-	junction_2	65546023	65546411	?????	novel	known	novel	0	2	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020026	chr5	-	junction_3	65546495	65546820	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14208	4592	4906	4710
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020026	chr5	-	junction_4	65546954	65547730	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12167	3977	4071	4119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020026	chr5	-	junction_5	65547827	65548081	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12946	4224	4490	4232
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020026	chr5	-	junction_6	65548198	65548288	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9546	3151	3338	3057
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020049	chr5	+	junction_1	66833666	66834286	?????	novel	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020049	chr5	+	junction_2	66834416	66837005	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	513	163	200	150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020049	chr5	+	junction_3	66837157	66839784	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	449	146	167	136
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020049	chr5	+	junction_4	66839871	66839951	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	471	147	165	159
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020049	chr5	+	junction_5	66840000	66841031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	549	184	201	164
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020049	chr5	+	junction_6	66841099	66842115	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	538	183	198	157
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020049	chr5	+	junction_7	66842175	66844184	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	490	152	177	161
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020059	chr5	+	junction_1	67418150	67418306	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	347	110	110	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020059	chr5	+	junction_2	67418377	67421072	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	476	153	154	169
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020059	chr5	+	junction_3	67421168	67421612	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	441	148	136	157
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020059	chr5	+	junction_4	67421801	67424644	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	467	143	166	158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020059	chr5	+	junction_5	67424713	67425853	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	385	133	140	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020059	chr5	+	junction_6	67425988	67441482	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	392	124	135	133
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020059	chr5	+	junction_7	67441567	67443438	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	410	123	152	135
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020077	chr5	-	junction_1	72317237	72318250	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	379	132	140	107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020077	chr5	-	junction_2	72318407	72320064	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	340	110	118	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020077	chr5	-	junction_3	72320218	72322693	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	313	108	102	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020077	chr5	-	junction_4	72322850	72325421	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	321	112	101	108
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_1	77063253	77063791	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	588	195	214	179
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_2	77063913	77065880	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	625	207	222	196
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_3	77066103	77067217	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	645	220	235	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_4	77067346	77067602	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	587	188	227	172
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_5	77067755	77069316	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	562	165	215	182
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_6	77069390	77070057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	550	175	199	176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_7	77070204	77070301	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	599	157	224	218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_8	77070415	77073520	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	561	179	210	172
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_9	77073728	77074637	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	708	221	272	215
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	junction_10	77074705	77098803	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	652	202	241	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020166	chr5	+	junction_1	88913206	88917462	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	227	72	81	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020166	chr5	+	junction_2	88917579	88920488	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	203	57	78	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020166	chr5	+	junction_3	88920683	88921940	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	183	61	65	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020166	chr5	+	junction_4	88922089	88924715	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	215	74	81	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020166	chr5	+	junction_5	88924832	88926220	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	196	62	81	53
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020166	chr5	+	junction_6	88926312	88929078	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	177	58	69	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020244	chr5	-	junction_1	100182844	100183493	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	244	74	90	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020244	chr5	-	junction_2	100183599	100183962	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	230	56	88	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020244	chr5	-	junction_3	100184055	100184339	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1118	325	423	370
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020244	chr5	-	junction_4	100184511	100184720	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1132	362	409	361
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020244	chr5	-	junction_5	100184836	100184943	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	934	270	354	310
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020244	chr5	-	junction_6	100185076	100185426	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	941	310	343	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020244	chr5	-	junction_7	100185589	100185671	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1152	341	442	369
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020244	chr5	-	junction_8	100185841	100186578	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	983	321	360	302
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020246	chr5	-	junction_1	100184055	100184339	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1118	325	423	370
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020246	chr5	-	junction_2	100184511	100184720	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1132	362	409	361
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020246	chr5	-	junction_3	100184836	100184943	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	934	270	354	310
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020246	chr5	-	junction_4	100185076	100185426	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	941	310	343	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020246	chr5	-	junction_5	100185589	100185671	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1152	341	442	369
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020246	chr5	-	junction_6	100185841	100186578	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	983	321	360	302
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020287	chr5	+	junction_1	104195013	104198443	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	305	91	110	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020287	chr5	+	junction_2	104198684	104202137	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	335	106	108	121
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020287	chr5	+	junction_3	104202234	104203355	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	342	100	127	115
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020287	chr5	+	junction_4	104203443	104205972	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	340	95	122	123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020287	chr5	+	junction_5	104206085	104207501	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	349	102	128	119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020287	chr5	+	junction_6	104207649	104209539	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	355	122	116	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020287	chr5	+	junction_7	104209625	104212802	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	357	111	127	119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020296	chr5	+	junction_1	104583115	104584240	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	593	218	192	183
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020296	chr5	+	junction_2	104584309	104584406	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5956	2041	1914	2001
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020296	chr5	+	junction_3	104584443	104585520	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5474	1875	1782	1817
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020296	chr5	+	junction_4	104585602	104586091	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6200	2138	2036	2026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020296	chr5	+	junction_5	104586134	104587130	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6058	2072	1941	2045
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020296	chr5	+	junction_6	104587413	104588094	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6489	2189	2074	2226
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020317	chr5	+	junction_1	108048513	108049735	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7195	2443	2359	2393
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020317	chr5	+	junction_2	108049806	108049887	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7088	2339	2420	2329
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020317	chr5	+	junction_3	108050004	108051134	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7026	2413	2374	2239
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020317	chr5	+	junction_4	108051270	108051531	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7297	2477	2468	2352
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020317	chr5	+	junction_5	108051735	108052582	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7843	2657	2683	2503
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020317	chr5	+	junction_6	108052761	108055054	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7486	2476	2584	2426
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020317	chr5	+	junction_7	108055144	108055762	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8146	2688	2740	2718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020384	chr5	-	junction_1	110422495	110425520	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	546	197	178	171
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020384	chr5	-	junction_2	110425641	110429062	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	482	165	166	151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020384	chr5	-	junction_3	110429226	110431511	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	527	185	161	181
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020384	chr5	-	junction_4	110431620	110433749	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	476	173	139	164
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_1	112474340	112475350	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	96	41	29	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_2	112475537	112475827	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	108	41	39	28
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_3	112476049	112477231	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	99	34	34	31
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_4	112477386	112477612	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	92	31	33	28
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_5	112477770	112478956	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	129	50	48	31
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_6	112479085	112479733	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	126	50	41	35
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_7	112479887	112480829	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	132	49	43	40
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_8	112481358	112481440	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	117	45	36	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_9	112481548	112482182	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	100	39	33	28
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_10	112482352	112482725	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	115	42	34	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_11	112482970	112483438	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	137	34	65	38
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_12	112483582	112483880	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	133	39	54	40
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	junction_13	112484047	112484851	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	131	43	47	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020447	chr5	-	junction_1	113711932	113734384	?????	novel	novel	novel	-313	-8531	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	30	13	7	10
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020469	chr5	-	junction_1	114262316	114263592	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	557	184	191	182
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020469	chr5	-	junction_2	114263792	114265586	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	542	191	167	184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020469	chr5	-	junction_3	114265831	114266143	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	267	88	87	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020582	chr5	+	junction_1	115479477	115480733	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	209	65	71	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020610	chr5	+	junction_1	115697948	115698799	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25196	8297	8891	8008
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020610	chr5	+	junction_2	115699064	115699164	?????	novel	known	novel	0	-7	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020610	chr5	+	junction_3	115699305	115699391	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13360	4423	4704	4233
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020610	chr5	+	junction_4	115699578	115700484	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17607	5873	6101	5633
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020610	chr5	+	junction_5	115700626	115701341	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6763	2255	2358	2150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020611	chr5	+	junction_1	115697948	115698799	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25196	8297	8891	8008
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020611	chr5	+	junction_2	115699064	115699157	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7201	2321	2569	2311
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020611	chr5	+	junction_3	115699305	115699391	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13360	4423	4704	4233
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020611	chr5	+	junction_4	115699578	115700484	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17607	5873	6101	5633
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020611	chr5	+	junction_5	115700626	115701347	?????	novel	known	novel	0	-6	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_1	122926082	122926364	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1940	717	592	631
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_2	122926528	122929670	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2129	704	718	707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_3	122929819	122929889	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1728	588	593	547
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_4	122929998	122931499	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2110	713	680	717
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_5	122931622	122932479	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2361	788	792	781
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_6	122932555	122937401	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2342	841	767	734
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_7	122937538	122938513	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2111	771	682	658
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_8	122938696	122940192	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1165	412	373	380
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_9	122940283	122940885	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2048	672	705	671
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_10	122940968	122944307	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	2053	692	667	694
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_11	122944499	122945362	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2046	737	663	646
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_12	122945465	122952611	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1753	611	570	572
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_13	122952679	122955883	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1889	644	608	637
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_14	122956068	122956916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2340	830	784	726
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_15	122957027	122957670	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2185	763	722	700
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	junction_16	122957751	122959042	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2042	705	698	639
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020776	chr5	+	junction_1	123366508	123372656	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	181	61	62	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020776	chr5	+	junction_2	123372760	123377604	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	158	45	55	58
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020776	chr5	+	junction_3	123377814	123379894	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	211	69	57	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020776	chr5	+	junction_4	123379997	123384256	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	200	66	63	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020776	chr5	+	junction_5	123384346	123386355	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	200	71	58	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020871	chr5	+	junction_1	129097343	129097591	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11744	4090	3896	3758
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020871	chr5	+	junction_2	129097639	129097747	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15636	5392	5181	5063
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020871	chr5	+	junction_3	129097833	129097929	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15431	5258	5162	5011
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020871	chr5	+	junction_4	129098056	129099066	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15341	5251	5072	5018
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020871	chr5	+	junction_5	129099255	129099438	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14794	5024	4874	4896
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020871	chr5	+	junction_6	129099610	129099837	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15069	5053	5060	4956
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_1	130040542	130040705	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	312	132	85	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_2	130040813	130040890	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	301	132	94	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_3	130040972	130041497	?????	known	known	known	0	0	FALSE	GCAG	canonical	FALSE	NA	NA	NA	1	102	0	102	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_4	130041582	130041837	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	276	97	87	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_5	130041898	130042009	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	260	85	89	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_6	130042095	130042241	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	298	106	95	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_7	130042357	130042803	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	242	80	74	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_8	130042867	130043519	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	266	80	85	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_9	130043573	130044937	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	255	66	93	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_10	130045016	130045136	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	283	85	94	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_11	130045215	130047150	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	263	78	87	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_12	130047249	130047388	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	286	100	92	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_13	130047446	130047673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	290	108	90	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_14	130047758	130048502	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	262	97	75	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_15	130048698	130052882	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	268	102	87	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	junction_16	130052938	130053134	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	230	89	76	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021036	chr5	+	junction_1	135917289	135917902	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2203	721	776	706
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021036	chr5	+	junction_2	135917967	135918094	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2181	685	780	716
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	junction_1	137526872	137526952	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	709	221	262	226
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	junction_2	137527170	137527265	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	706	237	241	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	junction_3	137527468	137527704	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	731	244	260	227
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	junction_4	137527772	137527864	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	789	271	279	239
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	junction_5	137528028	137528107	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	724	227	259	238
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	junction_6	137528172	137528445	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	641	187	255	199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	junction_7	137528553	137528659	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	696	220	237	239
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	junction_8	137528699	137528956	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	650	216	240	194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	junction_9	137529103	137531400	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	634	219	247	168
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021119	chr5	+	junction_1	137777484	137777563	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	301	100	102	99
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021119	chr5	+	junction_2	137777808	137777887	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	429	149	145	135
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_1	140405582	140411016	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3171	1102	1054	1015
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_2	140411210	140412191	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2658	915	912	831
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_3	140412312	140412537	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2428	829	824	775
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_4	140412596	140412771	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2913	987	970	956
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_5	140412901	140413164	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3220	1084	1083	1053
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_6	140413323	140415806	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2917	971	1019	927
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_7	140415939	140416016	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	3284	1118	1068	1098
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_8	140416084	140416725	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2887	1037	921	929
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_9	140416773	140418678	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3046	1070	953	1023
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_10	140418894	140422002	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_11	140422076	140423039	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2881	1013	930	938
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_12	140423163	140424070	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2972	1019	981	972
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_13	140424150	140425667	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3091	1039	1031	1021
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_14	140425807	140426740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3185	1082	1093	1010
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_15	140426867	140427491	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2925	1003	986	936
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_16	140427570	140427878	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2626	861	874	891
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_17	140427988	140428074	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3031	1032	967	1032
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	junction_18	140428192	140428628	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3947	1393	1232	1322
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021258	chr5	+	junction_1	143389808	143398245	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	619	207	229	183
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021258	chr5	+	junction_2	143398347	143403804	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	606	205	200	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021258	chr5	+	junction_3	143403964	143405194	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	632	221	216	195
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021258	chr5	+	junction_4	143405448	143406555	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	608	172	257	179
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021271	chr5	+	junction_1	143534890	143548511	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	103	35	31	37
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021283	chr5	-	junction_1	143840009	143841382	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	571	165	191	215
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021283	chr5	-	junction_2	143841615	143843366	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	753	252	254	247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021283	chr5	-	junction_3	143843574	143846398	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	560	205	169	186
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021295	chr5	+	junction_1	144483294	144484928	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	146	44	55	47
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021295	chr5	+	junction_2	144485146	144490209	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	172	59	65	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021295	chr5	+	junction_3	144490455	144492106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	179	63	65	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021295	chr5	+	junction_4	144492287	144492976	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	192	60	69	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021357	chr5	+	junction_1	146771073	146771257	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12138	3939	4323	3876
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021357	chr5	+	junction_2	146771915	146772373	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13970	4624	4874	4472
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021357	chr5	+	junction_3	146772525	146772673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8667	2863	3012	2792
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021371	chr5	+	junction_1	147014504	147015344	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	451	131	162	158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_1	6042333	6042558	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	693	237	248	208
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_2	6042650	6042740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	629	217	217	195
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_3	6042900	6052764	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	711	236	233	242
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_4	6052904	6073401	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	707	243	223	241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_5	6073543	6095146	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	759	253	249	257
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_6	6095228	6096669	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	725	248	233	244
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_7	6096723	6109180	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	769	272	245	252
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_8	6109340	6109936	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	643	229	207	207
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_9	6110022	6113937	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	600	199	191	210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_10	6114023	6114224	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	666	235	213	218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_11	6114319	6114969	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	655	212	242	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_12	6115109	6117098	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	658	206	212	240
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_13	6117246	6131628	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	590	195	193	202
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_14	6131769	6152407	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	699	225	231	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_15	6152524	6180970	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	719	245	238	236
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_16	6181114	6191263	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	693	247	231	215
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	junction_17	6191318	6216995	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	691	249	231	211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021622	chr6	+	junction_1	40448760	40449004	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	282	84	91	107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021622	chr6	+	junction_2	40449068	40451598	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3072	1048	1039	985
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021622	chr6	+	junction_3	40451660	40453300	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2944	1017	966	961
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021622	chr6	+	junction_4	40453442	40453681	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2472	822	770	880
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021622	chr6	+	junction_5	40453770	40454856	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2591	896	774	921
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021622	chr6	+	junction_6	40454946	40457786	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2538	888	768	882
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021658	chr6	+	junction_1	49051038	49052019	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	267	245	269
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021658	chr6	+	junction_2	49052199	49059778	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	799	297	234	268
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021658	chr6	+	junction_3	49059861	49061436	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	850	289	285	276
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021690	chr6	-	junction_1	50542366	50542471	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5579	1895	1936	1748
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021690	chr6	-	junction_2	50542649	50543395	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4909	1575	1732	1602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021810	chr6	-	junction_1	67012757	67013661	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	118	47	47	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021810	chr6	-	junction_2	67013900	67013993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	118	34	38	46
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021810	chr6	-	junction_3	67014096	67014184	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	126	47	38	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021912	chr6	-	junction_1	72820114	72825207	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1196	416	401	379
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021912	chr6	-	junction_2	72825491	72826426	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1059	357	334	368
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021920	chr6	-	junction_1	72934636	72934891	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021920	chr6	-	junction_2	72935008	72935319	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	27215	8862	9550	8803
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021953	chr6	+	junction_1	82933688	82944947	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	611	208	186	217
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021953	chr6	+	junction_2	82945134	82958796	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	580	197	193	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021953	chr6	+	junction_3	82958966	82980710	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	516	203	154	159
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021953	chr6	+	junction_4	82980885	82982486	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	508	173	181	154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021953	chr6	+	junction_5	82982650	82983298	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	623	216	220	187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021953	chr6	+	junction_6	82983441	83003178	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	490	175	148	167
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021953	chr6	+	junction_7	83003390	83005372	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021953	chr6	+	junction_8	83005514	83006750	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	481	159	163	159
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022052	chr6	+	junction_1	86342802	86343591	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1864	658	609	597
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022052	chr6	+	junction_2	86343733	86345712	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1740	583	560	597
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_1	88442651	88444547	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1160	418	370	372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_2	88444635	88450058	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1219	403	411	405
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_3	88450192	88456108	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1366	511	430	425
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_4	88456261	88459099	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1312	495	428	389
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_5	88459190	88459944	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1202	431	433	338
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_6	88460095	88461389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1392	452	471	469
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_7	88461454	88462694	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1228	400	420	408
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_8	88462894	88468497	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1324	420	465	439
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_9	88468601	88473389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1291	452	382	457
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	junction_10	88473482	88474209	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1426	496	442	488
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_1	97161827	97162301	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	675	231	198	246
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_2	97162357	97162443	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	640	205	225	210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_3	97162508	97162610	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	645	216	212	217
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_4	97162712	97163029	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	697	238	227	232
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_5	97163112	97163197	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	692	240	220	232
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_6	97163235	97163623	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	798	260	263	275
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_7	97163678	97166489	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	746	255	238	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_8	97166604	97166714	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	681	235	202	244
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_9	97166818	97168053	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	707	231	254	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_10	97168210	97168486	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	619	208	212	199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_11	97168552	97169701	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	592	206	213	173
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_12	97169746	97173797	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	534	184	184	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_13	97173879	97176199	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	683	221	232	230
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_14	97176283	97178877	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	620	222	213	185
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_15	97178959	97180434	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	712	244	232	236
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	junction_16	97180556	97182266	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	567	175	194	198
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022262	chr6	+	junction_1	113419759	113424218	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	705	239	201	265
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022408	chr6	+	junction_1	122603570	122605535	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2450	838	757	855
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022408	chr6	+	junction_2	122605769	122606259	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1211	422	371	418
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022408	chr6	+	junction_3	122606296	122606868	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	943	346	286	311
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022413	chr6	+	junction_1	122684893	122688496	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4542	1570	1518	1454
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022413	chr6	+	junction_2	122688763	122689587	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4561	1613	1480	1468
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022413	chr6	+	junction_3	122689675	122690103	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	354	128	118	108
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	junction_1	122707100	122708351	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8407	2807	2964	2636
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	junction_2	122708556	122709329	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9621	3187	3493	2941
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	junction_3	122709417	122709719	?????	novel	novel	novel	-15	9	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	junction_4	122709834	122712381	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9091	3102	3240	2749
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	junction_5	122712570	122713537	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8853	2980	3139	2734
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	junction_6	122713701	122714016	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9345	3113	3315	2917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	junction_7	122714258	122716791	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8555	2787	3113	2655
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	junction_8	122716953	122717346	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10026	3331	3474	3221
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	junction_9	122717440	122719334	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10745	3469	3811	3465
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_1	124640323	124675032	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	865	326	267	272
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_2	124675141	124676201	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	738	276	248	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_3	124676309	124676969	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	888	313	277	298
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_4	124677064	124677203	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	810	282	244	284
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_5	124677242	124677635	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	784	263	246	275
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_6	124677815	124678431	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	815	274	300	241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_7	124678541	124679198	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	842	257	303	282
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_8	124679286	124679374	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	850	281	281	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_9	124679542	124679968	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	813	275	280	258
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_10	124680117	124680189	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	868	271	289	308
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_11	124680349	124680457	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	981	364	304	313
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	junction_12	124680591	124680762	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	800	303	246	251
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022483	chr6	-	junction_1	124891196	124891370	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	748	255	273	220
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022483	chr6	-	junction_2	124891430	124891597	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	591	191	209	191
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022483	chr6	-	junction_3	124891677	124891880	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	521	154	189	178
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022483	chr6	-	junction_4	124891953	124894522	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	531	164	194	173
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022494	chr6	-	junction_1	124891196	124891370	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	748	255	273	220
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022494	chr6	-	junction_2	124891430	124891597	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	591	191	209	191
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022494	chr6	-	junction_3	124891677	124891886	?????	novel	known	novel	0	-6	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022655	chr6	-	junction_1	142436331	142438218	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	685	225	234	226
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022655	chr6	-	junction_2	142438343	142439825	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	793	263	269	261
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022655	chr6	-	junction_3	142439944	142441293	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	260	267	254
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022655	chr6	-	junction_4	142441468	142444230	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	799	273	241	285
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022655	chr6	-	junction_5	142444405	142447065	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	857	298	269	290
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022655	chr6	-	junction_6	142447184	142451137	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	846	324	267	255
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022762	chr7	+	junction_1	3633056	3633556	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	674	208	249	217
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022762	chr7	+	junction_2	3633742	3633843	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	993	298	339	356
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022782	chr7	+	junction_1	3697844	3697976	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1195	398	399	398
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022782	chr7	+	junction_2	3698227	3698350	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1224	423	409	392
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022782	chr7	+	junction_3	3698621	3703526	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1035	369	347	319
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022792	chr7	+	junction_1	3707064	3707325	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8457	2807	2886	2764
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022792	chr7	+	junction_2	3707448	3707644	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14286	4871	4705	4710
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022792	chr7	+	junction_3	3707770	3708731	?????	novel	novel	known	2	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022792	chr7	+	junction_4	3708919	3709649	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15019	5199	4866	4954
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022799	chr7	+	junction_1	3707064	3707325	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8457	2807	2886	2764
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022799	chr7	+	junction_2	3707448	3707647	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	178	178	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022799	chr7	+	junction_3	3707768	3708731	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14983	5127	4868	4988
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022799	chr7	+	junction_4	3708919	3709649	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15019	5199	4866	4954
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022928	chr7	+	junction_1	12656316	12656899	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18861	6243	6563	6055
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022928	chr7	+	junction_2	12657009	12659318	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18474	6134	6419	5921
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022928	chr7	+	junction_3	12659524	12659663	?????	novel	novel	known	-5	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	12	0	12	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022928	chr7	+	junction_4	12659793	12660322	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15758	5173	5457	5128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022928	chr7	+	junction_5	12660422	12660498	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	14799	4808	5166	4825
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022940	chr7	-	junction_1	12740308	12740950	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	196	59	74	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022940	chr7	-	junction_2	12742257	12743692	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	86	25	37	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023181	chr7	+	junction_1	24584093	24584560	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12982	4335	4287	4360
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023181	chr7	+	junction_2	24584632	24584876	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25653	8680	8357	8616
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023181	chr7	+	junction_3	24584978	24585531	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	397	139	135	123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023181	chr7	+	junction_4	24585613	24587706	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	824	269	271	284
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023181	chr7	+	junction_5	24587891	24588331	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15652	5220	5144	5288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023181	chr7	+	junction_6	24588387	24589165	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8873	2968	2945	2960
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023189	chr7	+	junction_1	24584280	24584560	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	133	47	47	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023189	chr7	+	junction_2	24584632	24584876	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25653	8680	8357	8616
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023189	chr7	+	junction_3	24584978	24587706	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	28441	9564	9314	9563
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023189	chr7	+	junction_4	24587891	24588331	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15652	5220	5144	5288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023189	chr7	+	junction_5	24588387	24589165	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	8873	2968	2945	2960
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	junction_1	26958387	26961592	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	79	30	29	20
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	junction_2	26961678	26964300	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	77	22	31	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	junction_3	26964441	26965979	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	104	31	49	24
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	junction_4	26966055	26966151	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	70	27	27	16
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	junction_5	26966227	26968203	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	88	33	34	21
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	junction_6	26968345	26973379	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	79	21	35	23
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	junction_7	26973570	26976051	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	100	34	33	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	junction_8	26976358	26978928	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	88	26	32	30
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	junction_9	26979052	26980178	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	104	36	40	28
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	junction_1	28524838	28525298	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	719	231	253	235
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	junction_2	28525504	28525609	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	699	237	233	229
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	junction_3	28525699	28529224	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	749	222	235	292
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	junction_4	28529350	28529426	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	685	228	232	225
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	junction_5	28529476	28529638	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	645	222	214	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	junction_6	28529704	28530641	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	668	229	206	233
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	junction_7	28530713	28530813	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	751	245	250	256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	junction_8	28530886	28531141	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	747	256	252	239
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	junction_9	28531293	28531428	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	732	249	238	245
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023437	chr7	+	junction_1	29608077	29609607	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	27	7	9	11
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023437	chr7	+	junction_2	29609673	29611593	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	35	14	15	6
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023437	chr7	+	junction_3	29611721	29612014	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	28	8	13	7
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023437	chr7	+	junction_4	29612111	29614041	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	26	9	10	7
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023488	chr7	+	junction_1	30252153	30253686	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18	6	3	9
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023488	chr7	+	junction_2	30253810	30253893	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	35	9	11	15
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023546	chr7	-	junction_1	33809665	33816018	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	327	114	104	109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023546	chr7	-	junction_2	33816088	33816736	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	336	119	127	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023546	chr7	-	junction_3	33816789	33818099	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	318	121	123	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023546	chr7	-	junction_4	33818231	33818361	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	259	96	99	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023546	chr7	-	junction_5	33818425	33818563	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	249	87	94	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023546	chr7	-	junction_6	33818632	33824909	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	276	100	108	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023546	chr7	-	junction_7	33825012	33831913	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	288	97	90	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023609	chr7	-	junction_1	37921583	37927364	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	140	39	56	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023623	chr7	-	junction_1	42312421	42314181	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	346	119	127	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023623	chr7	-	junction_2	42314243	42314441	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	350	97	131	122
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023623	chr7	-	junction_3	42314569	42342074	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	231	67	93	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_1	44398076	44401538	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	94	27	35	32
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_2	44401601	44403239	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	145	41	53	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_3	44403380	44407169	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	162	39	78	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_4	44407320	44409123	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	149	47	52	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_5	44409319	44410301	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	134	57	46	31
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_6	44410367	44412414	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	139	55	41	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_7	44412482	44413548	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	141	41	47	53
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_8	44413634	44414206	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	159	52	57	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_9	44414313	44416545	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	151	47	61	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_10	44416639	44417866	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	164	53	63	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_11	44418000	44418956	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	144	51	51	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_12	44419078	44420287	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	161	53	62	46
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_13	44420347	44424799	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	181	52	67	62
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	junction_14	44424960	44426645	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	150	49	51	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023694	chr7	+	junction_1	44498773	44501994	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	159	56	54	49
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023694	chr7	+	junction_2	44502384	44503203	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	274	116	85	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023694	chr7	+	junction_3	44503282	44503362	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	331	134	97	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023694	chr7	+	junction_4	44503533	44504015	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	289	99	112	78
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_1	44506979	44507586	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	239	74	82	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_2	44507634	44507876	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	235	82	77	76
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_3	44508174	44509146	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	226	74	81	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_4	44509227	44509311	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	229	76	79	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_5	44509370	44509500	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	213	74	65	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_6	44509609	44509783	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	204	74	65	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_7	44509856	44510286	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	222	75	68	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_8	44510336	44510412	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	204	67	62	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_9	44510484	44510570	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	182	63	51	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_10	44510664	44510741	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	219	68	71	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_11	44510839	44510923	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	258	103	65	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_12	44510986	44511072	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	229	81	70	78
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_13	44511183	44511617	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	291	93	94	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_14	44511706	44511789	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	212	77	56	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	junction_15	44511852	44511922	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	244	86	79	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023789	chr7	-	junction_1	44775457	44775538	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17594	5660	6038	5896
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023789	chr7	-	junction_2	44775678	44775901	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	190	61	69	60
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023789	chr7	-	junction_3	44775962	44776132	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16413	5407	5699	5307
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023789	chr7	-	junction_4	44776219	44776414	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18396	6158	6416	5822
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023789	chr7	-	junction_5	44776517	44776632	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16202	5398	5670	5134
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023789	chr7	-	junction_6	44776699	44776919	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16273	5436	5600	5237
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023789	chr7	-	junction_7	44776993	44778123	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11064	3709	3863	3492
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023858	chr7	-	junction_1	45172747	45173162	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	424	150	148	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023858	chr7	-	junction_2	45174816	45175418	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	356	115	120	121
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023909	chr7	+	junction_1	45547091	45549055	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	64	23	19	22
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023909	chr7	+	junction_2	45549161	45556341	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	48	21	14	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023909	chr7	+	junction_3	45556537	45557530	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	66	17	28	21
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023909	chr7	+	junction_4	45557662	45558745	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	63	21	19	23
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023909	chr7	+	junction_5	45559026	45565506	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	59	20	18	21
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023909	chr7	+	junction_6	45565697	45565834	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	50	9	22	19
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023977	chr7	+	junction_1	64042592	64049916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	314	102	99	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023977	chr7	+	junction_2	64050255	64061582	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	203	63	59	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024088	chr7	+	junction_1	80791793	80803147	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	108	27	45	36
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024088	chr7	+	junction_2	80803274	80810712	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	114	41	47	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024088	chr7	+	junction_3	80810844	80814018	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	109	33	34	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024088	chr7	+	junction_4	80814188	80814273	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	121	34	33	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024088	chr7	+	junction_5	80814472	80817713	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	121	42	37	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024088	chr7	+	junction_6	80817796	80818711	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	117	44	34	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024088	chr7	+	junction_7	80818811	80818914	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	128	40	47	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024088	chr7	+	junction_8	80819027	80819287	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	129	40	48	41
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024109	chr7	+	junction_1	81173425	81178534	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	35	9	6	20
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024109	chr7	+	junction_2	81178689	81179094	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	103	34	25	44
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024109	chr7	+	junction_3	81179276	81180958	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	93	29	37	27
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024185	chr7	-	junction_1	90100144	90100750	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	782	283	257	242
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024185	chr7	-	junction_2	90100866	90101936	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	71	24	31	16
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024185	chr7	-	junction_3	90102109	90104631	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	819	284	262	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024185	chr7	-	junction_4	90104728	90106279	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	739	240	243	256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024293	chr7	+	junction_1	100257501	100275758	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	628	211	222	195
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024293	chr7	+	junction_2	100275818	100277610	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	737	260	242	235
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024293	chr7	+	junction_3	100277665	100279044	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	462	149	155	158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024293	chr7	+	junction_4	100279151	100280948	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	477	153	164	160
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024293	chr7	+	junction_5	100281061	100283851	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	759	231	268	260
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024293	chr7	+	junction_6	100283946	100285901	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	692	237	239	216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024293	chr7	+	junction_7	100285969	100288461	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	699	241	251	207
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_1	105395980	105396149	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	354	113	126	115
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_2	105396276	105396593	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	340	108	118	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_3	105396753	105396865	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	339	108	128	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_4	105396987	105397788	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	349	118	115	116
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_5	105397859	105398089	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	326	108	129	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_6	105398279	105398431	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	312	117	103	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_7	105398631	105398743	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	309	110	95	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_8	105398920	105399066	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	341	114	121	106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_9	105399195	105399386	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	364	120	127	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_10	105399538	105400796	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	307	111	100	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	junction_11	105400937	105401188	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	296	111	104	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_1	109617716	109626277	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	792	234	305	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_2	109626360	109628897	?????	known	known	known	0	0	FALSE	GCAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_3	109629052	109630814	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	840	267	311	262
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_4	109630974	109636150	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	632	203	223	206
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_5	109636308	109638370	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	982	299	369	314
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_6	109638461	109639812	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	710	215	277	218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_7	109639908	109640019	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	638	216	227	195
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_8	109640105	109641187	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	611	196	219	196
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_9	109641323	109641992	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	738	240	256	242
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_10	109642093	109643615	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	775	261	261	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_11	109643693	109643824	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	670	240	212	218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_12	109643942	109645368	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	765	248	270	247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_13	109645459	109645884	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	764	254	272	238
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_14	109646051	109646193	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	714	197	282	235
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_15	109646355	109647335	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	710	205	262	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_16	109647465	109648000	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	794	272	300	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_17	109648068	109648151	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	900	290	322	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_18	109648278	109648802	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	903	280	343	280
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_19	109648901	109649986	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	831	253	315	263
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_20	109650083	109650219	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1040	313	381	346
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_21	109650441	109650528	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	777	260	295	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_22	109650735	109651917	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	782	267	271	244
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_23	109652125	109653206	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	924	315	345	264
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	junction_24	109653324	109654223	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	915	280	340	295
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024449	chr7	-	junction_1	113647487	113649535	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	204	74	69	61
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024449	chr7	-	junction_2	113649655	113657774	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	92	92	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024449	chr7	-	junction_3	113657884	113658161	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	275	86	101	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024449	chr7	-	junction_4	113658265	113659566	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	252	76	88	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024449	chr7	-	junction_5	113659655	113716630	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	234	74	87	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024496	chr7	-	junction_1	118124518	118125046	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	940	308	318	314
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024496	chr7	-	junction_2	118125116	118126559	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	959	320	330	309
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024496	chr7	-	junction_3	118126700	118127526	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	921	320	313	288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024496	chr7	-	junction_4	118127642	118128781	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	933	328	288	317
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024496	chr7	-	junction_5	118128961	118132401	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1040	349	349	342
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024628	chr7	+	junction_1	126295272	126295354	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2580	912	784	884
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024628	chr7	+	junction_2	126295453	126295726	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2284	771	734	779
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024644	chr7	-	junction_1	126385464	126385543	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2424	827	848	749
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024644	chr7	-	junction_2	126385734	126386391	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2598	890	853	855
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024644	chr7	-	junction_3	126386519	126386608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2499	854	871	774
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024644	chr7	-	junction_4	126386783	126387288	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2526	848	852	826
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024644	chr7	-	junction_5	126387391	126387555	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2874	984	1004	886
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024644	chr7	-	junction_6	126387607	126388195	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2674	906	901	867
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024644	chr7	-	junction_7	126388248	126391232	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2469	835	873	761
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024650	chr7	-	junction_1	126394687	126394784	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	21188	7128	7061	6999
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024650	chr7	-	junction_2	126394985	126395121	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20410	6956	6706	6748
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024650	chr7	-	junction_3	126395297	126395388	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20619	6997	6826	6796
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024650	chr7	-	junction_4	126395473	126395766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19253	6534	6418	6301
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024650	chr7	-	junction_5	126395928	126396025	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20251	6945	6623	6683
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024650	chr7	-	junction_6	126396081	126396508	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20322	6970	6610	6742
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024650	chr7	-	junction_7	126396721	126396810	?????	novel	known	novel	0	5	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024650	chr7	-	junction_8	126396949	126398216	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19619	6657	6518	6444
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_1	126627013	126627102	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	759	263	223	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_2	126627163	126627241	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	795	261	263	271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_3	126627455	126628086	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	826	263	274	289
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_4	126628149	126628506	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	766	249	243	274
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_5	126628673	126630100	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	751	268	245	238
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_6	126630270	126631800	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	720	246	240	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_7	126631937	126632053	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	712	255	221	236
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_8	126632208	126632333	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	689	268	204	217
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_9	126632565	126632640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	810	285	245	280
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_10	126632851	126633049	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	735	228	236	271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_11	126633205	126633295	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	808	288	251	269
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_12	126633424	126634919	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	757	263	230	264
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	junction_13	126635113	126641515	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	876	290	294	292
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024706	chr7	+	junction_1	126690645	126691340	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	90	26	38	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_1	127071150	127071269	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	215	76	70	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_2	127071439	127072766	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	232	92	76	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_3	127072889	127072968	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	203	78	75	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_4	127073159	127073550	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	258	92	87	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_5	127073595	127073685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	232	82	77	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_6	127073892	127074223	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	225	87	74	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_7	127074798	127074928	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	235	76	85	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_8	127074999	127075078	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	250	85	84	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_9	127075171	127075393	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	218	67	78	73
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	junction_10	127075466	127075555	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	200	63	68	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_1	127511915	127514399	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	296	115	88	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_2	127514475	127514550	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	295	98	100	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_3	127514727	127519407	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	331	105	118	108
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_4	127519462	127519593	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	324	96	128	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_5	127519759	127521330	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	330	108	108	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_6	127521421	127523549	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	335	121	108	106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_7	127523691	127523775	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	302	112	96	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_8	127523870	127523967	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	317	111	107	99
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_9	127524119	127524280	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	316	108	98	110
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	junction_10	127524436	127524758	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	296	104	98	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_1	127566750	127568733	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	840	269	341	230
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_2	127568759	127568888	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	843	271	320	252
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_3	127569044	127571009	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	619	190	250	179
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_4	127571155	127571288	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	855	268	334	253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_5	127571477	127571725	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	819	235	348	236
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_6	127571943	127573571	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1072	330	390	352
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_7	127573607	127575059	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1038	305	388	345
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_8	127575093	127576389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1068	290	419	359
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_9	127576494	127577312	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1119	338	445	336
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_10	127577443	127579063	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1139	365	445	329
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_11	127579166	127579294	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1124	359	432	333
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_12	127579419	127580362	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1354	461	503	390
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_13	127580464	127580582	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1177	366	480	331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	junction_14	127580728	127580962	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1395	441	540	414
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024833	chr7	+	junction_1	132212560	132232210	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	345	121	115	109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024833	chr7	+	junction_2	132232399	132235729	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	307	105	100	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024833	chr7	+	junction_3	132235884	132243252	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	297	104	92	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024833	chr7	+	junction_4	132243317	132244215	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	337	124	106	107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024833	chr7	+	junction_5	132244309	132251986	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	317	112	106	99
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024833	chr7	+	junction_6	132252079	132307320	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	290	87	102	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024853	chr7	+	junction_1	133311258	133315916	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1578	558	519	501
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024853	chr7	+	junction_2	133315992	133316627	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1591	531	536	524
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024853	chr7	+	junction_3	133316709	133318589	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1698	547	591	560
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024853	chr7	+	junction_4	133318680	133319327	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1658	553	566	539
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024853	chr7	+	junction_5	133319516	133320832	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1595	559	508	528
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024853	chr7	+	junction_6	133321008	133322435	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1685	586	589	510
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_1	137039501	137046707	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3815	1280	1286	1249
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_2	137046817	137054425	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3822	1277	1325	1220
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_3	137054501	137055141	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3403	1139	1165	1099
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_4	137055344	137060851	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3305	1088	1097	1120
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_5	137061025	137061209	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3851	1306	1292	1253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_6	137061272	137063074	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3350	1073	1171	1106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_7	137063133	137064689	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3498	1104	1249	1145
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_8	137064743	137065826	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4098	1355	1393	1350
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_9	137065867	137066143	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3671	1216	1256	1199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	junction_10	137066237	137069661	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3640	1210	1254	1176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_1	137039501	137046707	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3815	1280	1286	1249
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_2	137046817	137054425	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3822	1277	1325	1220
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_3	137054501	137055141	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3403	1139	1165	1099
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_4	137055344	137060851	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3305	1088	1097	1120
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_5	137061025	137061209	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3851	1306	1292	1253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_6	137061276	137063074	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_7	137063133	137064689	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3498	1104	1249	1145
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_8	137064743	137065826	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4098	1355	1393	1350
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_9	137065867	137066143	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3671	1216	1256	1199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	junction_10	137066237	137069661	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3640	1210	1254	1176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024882	chr7	-	junction_1	138493690	138496108	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	310	106	107	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024882	chr7	-	junction_2	138496259	138496338	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	289	114	88	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024882	chr7	-	junction_3	138496446	138499724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	348	119	116	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024882	chr7	-	junction_4	138499807	138500409	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	352	132	99	121
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024882	chr7	-	junction_5	138500558	138511091	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	305	123	78	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_1	139717687	139718231	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	496	177	158	161
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_2	139718312	139720121	?????	novel	novel	novel	15	-13	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_3	139720214	139723650	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	445	157	139	149
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_4	139723732	139724253	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	488	160	156	172
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_5	139724311	139724542	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	462	160	147	155
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_6	139724634	139725910	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	499	184	152	163
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_7	139725973	139726723	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	507	167	165	175
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_8	139726821	139727165	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	538	175	165	198
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_9	139727248	139729660	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	502	156	156	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	junction_10	139729774	139730067	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	514	167	171	176
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024920	chr7	+	junction_1	140415172	140415524	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	242	78	88	76
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024920	chr7	+	junction_2	140415665	140416659	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	251	96	74	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024920	chr7	+	junction_3	140416796	140417598	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	255	92	77	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025053	chr7	+	junction_1	142606804	142616229	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6345	2163	1860	2322
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025053	chr7	+	junction_2	142616345	142618945	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6663	2328	1963	2372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025053	chr7	+	junction_3	142619044	142619679	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5916	2086	1782	2048
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025053	chr7	+	junction_4	142619755	142619984	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5787	2050	1819	1918
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025053	chr7	+	junction_5	142620090	142620397	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6640	2338	2067	2235
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025053	chr7	+	junction_6	142620500	142620883	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6204	2200	1928	2076
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025053	chr7	+	junction_7	142620971	142621048	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6393	2205	2006	2182
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025160	chr8	+	junction_1	11608567	11611417	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	111	39	33	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025164	chr8	-	junction_1	11662948	11665814	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	454	147	184	123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025164	chr8	-	junction_2	11665911	11669061	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	548	179	209	160
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025164	chr8	-	junction_3	11669298	11678438	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	209	84	60	65
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025164	chr8	-	junction_4	11678531	11682865	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	441	162	128	151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025164	chr8	-	junction_5	11683019	11685410	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	398	124	144	130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025211	chr8	-	junction_1	14004136	14005719	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	296	94	102	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025211	chr8	-	junction_2	14005818	14024540	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	271	86	92	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025221	chr8	+	junction_1	14939119	14944571	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	162	66	47	49
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025221	chr8	+	junction_2	14945231	14946530	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	211	76	84	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025299	chr8	-	junction_1	26258438	26259309	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	399	132	137	130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025299	chr8	-	junction_2	26259565	26261106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	378	138	146	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025299	chr8	-	junction_3	26261362	26267450	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	388	123	137	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025299	chr8	-	junction_4	26267556	26274926	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	405	124	136	145
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025465	chr8	-	junction_1	57936085	57938075	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1666	578	526	562
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025465	chr8	-	junction_2	57938175	57938543	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1744	581	538	625
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025465	chr8	-	junction_3	57938670	57940285	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1617	559	503	555
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025528	chr8	-	junction_1	70347061	70347153	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6397	2201	1997	2199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025528	chr8	-	junction_2	70347226	70347891	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6124	2113	1957	2054
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025528	chr8	-	junction_3	70347971	70354191	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6193	2130	2002	2061
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025533	chr8	-	junction_1	70347061	70347153	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6397	2201	1997	2199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025533	chr8	-	junction_2	70347226	70347891	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6124	2113	1957	2054
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025533	chr8	-	junction_3	70347964	70354187	?????	novel	novel	novel	-7	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_1	70746338	70746477	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	294	96	96	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_2	70746550	70746648	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	320	104	113	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_3	70746733	70747332	?????	novel	novel	novel	-5	4	FALSE	GTAG	canonical	TRUE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_4	70747412	70748016	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	313	121	99	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_5	70748115	70748224	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	289	94	98	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_6	70748302	70749032	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	286	98	102	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_7	70749109	70749552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	292	100	95	97
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_8	70749694	70749780	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	288	90	103	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_9	70749969	70750525	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	250	82	91	77
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_10	70750648	70750730	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	270	81	94	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_11	70750817	70753628	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	273	89	89	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	junction_12	70753753	70754972	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	264	91	86	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025591	chr8	-	junction_1	70961179	70961945	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	22365	7658	7477	7230
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025591	chr8	-	junction_2	70962033	70962170	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	22745	7746	7582	7417
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025591	chr8	-	junction_3	70962285	70962983	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	600	200	210	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025589	chr8	-	junction_1	70961179	70961945	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	22365	7658	7477	7230
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025589	chr8	-	junction_2	70962033	70962170	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	22745	7746	7582	7417
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025589	chr8	-	junction_3	70962282	70962987	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1892	609	644	639
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025606	chr8	-	junction_1	70966819	70968044	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	531	168	197	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025606	chr8	-	junction_2	70968092	70971014	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	701	213	234	254
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025606	chr8	-	junction_3	70971168	70972586	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	754	238	270	246
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025606	chr8	-	junction_4	70972712	70975712	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	383	135	114	134
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025683	chr8	-	junction_1	71348152	71348243	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	34365	12659	8636	13070
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025683	chr8	-	junction_2	71348348	71348559	?????	novel	novel	known	-6	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025683	chr8	-	junction_3	71348690	71348776	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19470	6564	6500	6406
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025683	chr8	-	junction_4	71348957	71350002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16397	5579	5510	5308
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025687	chr8	-	junction_1	71348152	71348243	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	34365	12659	8636	13070
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025687	chr8	-	junction_2	71348354	71348564	?????	novel	known	novel	0	-5	TRUE	GTAG	canonical	FALSE	NA	NA	NA	2	7	4	0	3
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025687	chr8	-	junction_3	71348690	71348776	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19470	6564	6500	6406
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025687	chr8	-	junction_4	71348957	71350002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16397	5579	5510	5308
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025692	chr8	-	junction_1	71348152	71348243	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	34365	12659	8636	13070
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025692	chr8	-	junction_2	71348690	71348776	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19470	6564	6500	6406
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025692	chr8	-	junction_3	71348957	71350002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16397	5579	5510	5308
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025798	chr8	+	junction_1	73072994	73073269	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2987	971	1079	937
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025798	chr8	+	junction_2	73074075	73074587	?????	novel	novel	known	-12	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025804	chr8	+	junction_1	73074087	73074587	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2955	971	1119	865
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025817	chr8	+	junction_1	73450037	73450671	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	680	219	243	218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025817	chr8	+	junction_2	73450779	73452164	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	717	230	257	230
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025817	chr8	+	junction_3	73452319	73457708	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	717	240	248	229
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025817	chr8	+	junction_4	73457907	73459972	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	667	222	236	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025817	chr8	+	junction_5	73460117	73465996	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	644	204	239	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025817	chr8	+	junction_6	73466117	73466357	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	664	230	230	204
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025846	chr8	-	junction_1	79233493	79235427	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	249	79	87	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	junction_1	83491121	83491483	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	488	182	145	161
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	junction_2	83491602	83492640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	491	181	161	149
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	junction_3	83492688	83493297	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	422	150	144	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	junction_4	83493403	83493841	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	476	160	160	156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	junction_5	83493969	83495948	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	554	182	191	181
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	junction_6	83496029	83497429	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	549	195	193	161
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	junction_7	83497501	83497967	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	426	146	152	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	junction_8	83497988	83499508	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	472	159	173	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	junction_9	83499641	83500685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	495	181	162	152
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025934	chr8	-	junction_1	84769961	84771398	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	87	25	37	25
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025961	chr8	-	junction_1	85399934	85401393	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	606	174	218	214
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025961	chr8	-	junction_2	85401492	85401627	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	670	205	244	221
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025961	chr8	-	junction_3	85401734	85402713	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	579	183	227	169
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025961	chr8	-	junction_4	85402888	85402969	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	507	156	218	133
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025961	chr8	-	junction_5	85403882	85414303	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	570	162	223	185
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_1	85416006	85416260	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	179	48	75	56
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_2	85416538	85417145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	598	192	215	191
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_3	85417202	85417439	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	403	132	144	127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_4	85417577	85417880	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	531	174	191	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_5	85418069	85421850	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	474	145	183	146
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_6	85421967	85422056	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	508	166	190	152
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_7	85422170	85423455	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	502	168	174	160
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_8	85423605	85423743	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	466	162	175	129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_9	85423831	85423897	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	516	151	194	171
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_10	85423968	85424053	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	500	152	178	170
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_11	85424189	85424274	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	513	156	192	165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_12	85424361	85424813	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	550	164	204	182
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_13	85424923	85425021	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	587	200	203	184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_14	85425099	85425767	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	599	189	222	188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_15	85425888	85425969	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	591	176	207	208
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	junction_16	85426100	85426231	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	635	201	223	211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026049	chr8	+	junction_1	85798683	85799080	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	212	79	70	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026049	chr8	+	junction_2	85799246	85799923	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	191	75	57	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026049	chr8	+	junction_3	85800046	85800131	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	210	73	69	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026049	chr8	+	junction_4	85800229	85800309	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	241	87	83	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026049	chr8	+	junction_5	85800397	85800840	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	246	81	82	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026049	chr8	+	junction_6	85800947	85801021	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	240	62	98	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026049	chr8	+	junction_7	85801126	85801362	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	273	86	98	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026049	chr8	+	junction_8	85801489	85801562	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	314	111	103	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_1	89059172	89059508	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	593	191	215	187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_2	89059653	89060365	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	589	198	190	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_3	89060510	89060732	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	554	191	177	186
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_4	89060845	89063708	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	501	171	150	180
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_5	89063766	89066036	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	521	181	160	180
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_6	89066149	89069362	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	507	166	170	171
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_7	89069499	89070209	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	554	192	178	184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_8	89070318	89071776	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	502	170	161	171
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_9	89071853	89072457	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	526	183	174	169
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_10	89072582	89073501	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	511	170	167	174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_11	89073687	89078427	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	493	178	145	170
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_12	89078539	89081256	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	463	157	140	166
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_13	89081402	89084164	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	473	181	136	156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_14	89084223	89084527	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	494	191	144	159
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_15	89084658	89088129	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	504	170	152	182
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	junction_16	89088339	89088533	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	543	195	162	186
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_1	94941260	94954290	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	950	293	334	323
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_2	94954484	94970281	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1205	399	387	419
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_3	94970400	95007898	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1198	385	388	425
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_4	95007962	95013116	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1146	392	385	369
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_5	95013246	95019295	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1090	382	364	344
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_6	95019371	95021648	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1140	377	362	401
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_7	95021739	95023077	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1174	399	385	390
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_8	95023218	95027387	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1184	414	391	379
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_9	95027521	95028695	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1175	389	409	377
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_10	95028854	95030227	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1185	421	407	357
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_11	95030394	95030787	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1175	389	388	398
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_12	95030882	95031867	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1115	374	382	359
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_13	95032060	95032652	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1126	421	362	343
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_14	95032780	95032901	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1130	397	361	372
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_15	95032975	95033229	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1127	386	358	383
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_16	95033275	95034468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1171	411	360	400
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_17	95034586	95035531	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1138	391	361	386
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_18	95035651	95036215	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1352	480	430	442
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_19	95036334	95036926	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1180	401	372	407
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_20	95037011	95038160	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1193	383	407	403
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	junction_21	95038290	95041212	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1238	435	399	404
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026173	chr8	-	junction_1	95549836	95550280	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1537	510	504	523
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026173	chr8	-	junction_2	95550360	95551843	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1577	546	491	540
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026173	chr8	-	junction_3	95551960	95553262	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1713	578	552	583
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026173	chr8	-	junction_4	95553337	95554904	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1594	541	523	530
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026173	chr8	-	junction_5	95555068	95555781	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1674	571	535	568
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026173	chr8	-	junction_6	95555859	95558400	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1849	638	629	582
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026173	chr8	-	junction_7	95558554	95559144	?????	novel	known	novel	0	-2	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026188	chr8	+	junction_1	95584270	95584374	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2096	710	683	703
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026188	chr8	+	junction_2	95584425	95586871	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1974	640	652	682
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026188	chr8	+	junction_3	95586941	95587071	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2204	731	720	753
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026188	chr8	+	junction_4	95587125	95588338	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1973	684	627	662
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026188	chr8	+	junction_5	95588468	95588809	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1933	695	618	620
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026188	chr8	+	junction_6	95588862	95589148	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1988	685	630	673
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026188	chr8	+	junction_7	95589318	95589437	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1957	685	644	628
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026188	chr8	+	junction_8	95589513	95590079	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1957	685	642	630
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_1	96564300	96567041	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	307	88	116	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_2	96567097	96568149	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	387	123	148	116
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_3	96568350	96568803	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	259	90	78	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_4	96568952	96570387	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	277	101	92	84
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_5	96570503	96570731	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	305	113	87	105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_6	96570790	96571515	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	318	104	113	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_7	96571615	96572426	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	251	87	84	80
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_8	96572572	96572760	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	347	134	120	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_9	96572960	96575008	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	314	104	116	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	junction_10	96575397	96579429	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	357	116	139	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_1	107330175	107330918	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	854	284	303	267
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_2	107331040	107375632	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	882	277	351	254
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_3	107375857	107380138	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	990	290	381	319
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_4	107380283	107380395	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	865	261	349	255
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_5	107380552	107383455	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1066	359	422	285
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_6	107383601	107384371	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1000	347	359	294
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_7	107384548	107384822	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	993	320	377	296
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_8	107384952	107386221	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	808	264	309	235
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_9	107386405	107387427	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1060	340	413	307
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_10	107387673	107388516	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	960	303	364	293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_11	107388663	107390378	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	981	322	375	284
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_12	107390604	107390827	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1013	317	390	306
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_13	107391056	107392025	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1072	366	386	320
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_14	107392157	107392818	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1173	379	450	344
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	junction_15	107392963	107395037	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1019	321	399	299
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026412	chr8	+	junction_1	112667485	112667791	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2738	895	938	905
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026412	chr8	+	junction_2	112667852	112669133	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026412	chr8	+	junction_3	112669307	112678946	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2741	901	945	895
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_1	117648523	117649066	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	221	70	77	74
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_2	117649181	117652820	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	315	105	115	95
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_3	117653002	117655274	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	258	70	107	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_4	117655321	117657816	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	294	95	114	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_5	117657877	117658332	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	286	91	106	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_6	117658410	117660025	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	270	87	91	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_7	117660203	117661433	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	267	95	88	84
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_8	117661536	117662932	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	259	95	72	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_9	117662991	117663900	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	284	107	79	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_10	117664014	117667182	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	391	137	128	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	junction_11	117667310	117667573	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	261	78	84	99
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	junction_1	122609835	122610329	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2143	695	766	682
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	junction_2	122610508	122611721	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2435	791	879	765
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	junction_3	122611872	122612647	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2152	736	740	676
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	junction_4	122612745	122613018	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2471	816	891	764
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	junction_5	122613123	122613596	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2449	792	879	778
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	junction_6	122613721	122614235	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2351	778	841	732
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	junction_7	122614281	122615060	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2415	772	867	776
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	junction_8	122615167	122623166	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2416	788	878	750
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	junction_9	122623305	122633804	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2182	707	781	694
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026544	chr8	+	junction_1	123338433	123339804	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	528	179	177	172
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026544	chr8	+	junction_2	123339978	123340659	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	741	258	266	217
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026544	chr8	+	junction_3	123340748	123341046	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	612	214	206	192
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026544	chr8	+	junction_4	123341127	123342129	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	617	210	196	211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026547	chr8	+	junction_1	123338433	123339804	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	528	179	177	172
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026547	chr8	+	junction_2	123339976	123340659	?????	novel	novel	known	-2	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026547	chr8	+	junction_3	123340748	123341046	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	612	214	206	192
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026547	chr8	+	junction_4	123341127	123342129	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	617	210	196	211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026578	chr8	-	junction_1	123869886	123872080	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	83	20	32	31
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026578	chr8	-	junction_2	123872262	123874789	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	94	28	35	31
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026578	chr8	-	junction_3	123874885	123875048	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	101	40	27	34
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026578	chr8	-	junction_4	123875176	123875957	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	102	42	23	37
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026578	chr8	-	junction_5	123876173	123884177	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	117	46	34	37
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026578	chr8	-	junction_6	123884327	123884926	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	57	17	14	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_1	124204787	124207087	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	779	247	277	255
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_2	124207176	124207809	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	684	220	236	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_3	124207885	124211341	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	684	235	227	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_4	124211428	124212627	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	631	221	218	192
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_5	124212778	124214097	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	663	242	221	200
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_6	124214167	124214939	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	766	264	274	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_7	124215065	124216493	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	704	248	225	231
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_8	124216765	124219279	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	667	232	202	233
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_9	124219418	124219613	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	730	254	226	250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_10	124219768	124220566	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	713	245	234	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_11	124220675	124221544	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	724	237	267	220
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_12	124221671	124225326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	692	249	225	218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_13	124225438	124226730	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	737	277	232	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_14	124226847	124227971	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	777	245	253	279
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_15	124228173	124228253	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	743	241	253	249
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	junction_16	124228449	124228586	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	781	258	284	239
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_1	125590052	125597514	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	615	206	216	193
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_2	125597698	125600071	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	683	219	236	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_3	125600249	125600957	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	609	210	195	204
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_4	125601088	125603658	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	617	205	214	198
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_5	125603787	125604173	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	694	245	212	237
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_6	125604250	125605251	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	573	190	189	194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_7	125605404	125605522	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	629	224	204	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_8	125605654	125606867	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	589	205	198	186
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_9	125607092	125610094	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	612	184	221	207
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_10	125610338	125611703	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	667	222	233	212
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_11	125611784	125612533	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	698	246	222	230
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_12	125612675	125613421	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	625	192	232	201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_13	125613519	125613591	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	625	220	194	211
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_14	125613686	125614496	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	636	219	207	210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	junction_15	125614559	125616010	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	609	193	224	192
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_1	15218287	15219023	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	104	32	26	46
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_2	15219118	15219820	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	506	183	158	165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_3	15220212	15221154	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	531	198	193	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_4	15221331	15221653	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	579	179	210	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_5	15221706	15222822	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	566	176	206	184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_6	15222992	15224069	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	229	73	86	70
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_7	15224133	15225285	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	256	81	84	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_8	15225329	15225526	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	258	74	84	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_9	15225561	15226397	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	217	70	71	76
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_10	15226428	15226678	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	272	86	101	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	junction_11	15226737	15228184	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	223	79	76	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026746	chr9	-	junction_1	20550495	20553319	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	93	33	28	32
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026746	chr9	-	junction_2	20553393	20555490	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	47	14	17	16
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026749	chr9	+	junction_1	20556190	20556488	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1048	350	373	325
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026749	chr9	+	junction_2	20556556	20556701	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1196	399	415	382
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026749	chr9	+	junction_3	20556786	20556917	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1057	338	360	359
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026749	chr9	+	junction_4	20556956	20557911	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1046	355	355	336
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026786	chr9	+	junction_1	20927398	20930214	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	431	153	150	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026786	chr9	+	junction_2	20930476	20936839	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	433	135	181	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026786	chr9	+	junction_3	20937155	20937607	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	355	107	126	122
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026786	chr9	+	junction_4	20937896	20938373	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	405	133	152	120
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026786	chr9	+	junction_5	20938632	20938727	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	447	155	153	139
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026786	chr9	+	junction_6	20938977	20939066	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	463	165	164	134
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026853	chr9	+	junction_1	21867301	21867972	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	72	20	20	32
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	junction_1	44655314	44656714	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1181	403	371	407
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	junction_2	44656920	44661621	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1046	343	372	331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	junction_3	44661731	44662512	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	977	351	328	298
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	junction_4	44662661	44663406	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1075	379	348	348
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	junction_5	44663573	44668416	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1027	360	333	334
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	junction_6	44668582	44669857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	910	323	278	309
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	junction_7	44670064	44670177	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	988	343	332	313
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	junction_8	44670358	44671258	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	980	334	311	335
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	junction_9	44671523	44678966	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1149	375	384	390
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_1	46184666	46184775	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	741	247	251	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_2	46184938	46185353	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	744	254	243	247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_3	46185445	46185954	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	818	253	300	265
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_4	46186026	46186661	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	745	255	273	217
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_5	46186749	46187028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	737	242	273	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_6	46187152	46187501	?????	novel	known	novel	0	-4	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_7	46187546	46187709	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	663	205	248	210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_8	46187777	46188089	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	619	205	220	194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_9	46188161	46188943	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	720	247	242	231
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_10	46189034	46189601	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	750	241	266	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_11	46189713	46190966	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	736	260	220	256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_12	46191054	46191213	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	752	251	251	250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	junction_13	46191280	46192335	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	665	223	233	209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	junction_1	46194472	46197640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	99	30	36	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	junction_2	46197732	46198314	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	112	27	42	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	junction_3	46198400	46198959	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	107	33	45	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	junction_4	46199734	46201423	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	107	32	48	27
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	junction_5	46201642	46202605	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	135	36	54	45
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	junction_6	46202709	46202992	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	128	34	39	55
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	junction_7	46203132	46203363	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	141	46	44	51
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	junction_8	46203549	46203745	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	138	43	52	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	junction_9	46203828	46209712	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	139	48	49	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027093	chr9	-	junction_1	48401289	48402147	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	405	136	139	130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027093	chr9	-	junction_2	48402239	48404706	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	438	145	153	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027093	chr9	-	junction_3	48404795	48405318	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	400	125	138	137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027093	chr9	-	junction_4	48405482	48405578	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027093	chr9	-	junction_5	48405688	48406454	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	96	37	31	28
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027180	chr9	+	junction_1	55116473	55116636	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1025	348	344	333
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027180	chr9	+	junction_2	55116780	55121192	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027180	chr9	+	junction_3	55121281	55122186	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1006	336	333	337
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027180	chr9	+	junction_4	55122283	55125598	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	906	300	335	271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027180	chr9	+	junction_5	55125764	55128305	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	977	342	313	322
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027180	chr9	+	junction_6	55128472	55130523	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1019	354	316	349
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_1	55362047	55368903	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1757	644	547	566
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_2	55368985	55372077	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1757	641	560	556
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_3	55372144	55389556	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1682	611	549	522
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_4	55389640	55392553	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1606	588	504	514
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_5	55392623	55393985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1702	663	487	552
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_6	55394088	55394683	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1574	562	487	525
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_7	55394795	55396113	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1595	578	513	504
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_8	55396214	55402845	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1517	534	474	509
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_9	55402929	55403025	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1647	566	524	557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_10	55403108	55407301	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1792	596	551	645
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	junction_11	55407449	55419314	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1790	627	574	589
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027191	chr9	-	junction_1	56044020	56052772	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	718	264	238	216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027191	chr9	-	junction_2	56052857	56053058	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	769	273	242	254
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027191	chr9	-	junction_3	56053212	56053797	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	762	261	233	268
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027191	chr9	-	junction_4	56053900	56054369	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	797	260	258	279
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027191	chr9	-	junction_5	56054445	56054670	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	748	255	255	238
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027191	chr9	-	junction_6	56054863	56068083	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	772	274	267	231
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027256	chr9	+	junction_1	58489810	58530969	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	352	136	116	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027256	chr9	+	junction_2	58531139	58535116	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	439	151	154	134
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027256	chr9	+	junction_3	58535212	58547951	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	388	136	133	119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027256	chr9	+	junction_4	58548086	58550811	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	367	122	133	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027256	chr9	+	junction_5	58551086	58557779	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	310	105	101	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027256	chr9	+	junction_6	58557802	58558540	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	372	126	129	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027256	chr9	+	junction_7	58558616	58559141	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	358	127	122	109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_1	59447260	59461415	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1236	444	397	395
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_2	59461509	59462621	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1344	467	445	432
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_3	59462688	59464154	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1305	456	437	412
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_4	59464202	59464570	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1359	453	469	437
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_5	59464682	59465316	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1239	415	418	406
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_6	59465419	59466606	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1261	417	439	405
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_7	59466740	59468179	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1167	401	393	373
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_8	59468361	59469225	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1100	402	351	347
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_9	59469310	59469578	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1112	387	366	359
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_10	59469652	59470149	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1209	465	403	341
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_11	59470334	59470506	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1298	491	403	404
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_12	59470598	59471165	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1326	500	424	402
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	junction_13	59471266	59472103	?????	novel	novel	known	-5	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	7	0	7	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_1	59563933	59572482	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18333	6151	6039	6143
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_2	59572650	59573145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17662	5938	5919	5805
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_3	59573238	59575831	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20424	6883	6881	6660
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_4	59575968	59576195	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_5	59576383	59577749	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15664	5314	5312	5038
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_6	59578021	59578857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16385	5636	5354	5395
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_7	59579013	59579203	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_8	59579357	59582850	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17206	5767	5856	5583
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_9	59583018	59585326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15738	5232	5305	5201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	junction_10	59585509	59586010	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17851	6137	5982	5732
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_1	59564554	59572482	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	209	62	79	68
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_2	59572650	59573145	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17662	5938	5919	5805
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_3	59573238	59575831	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20424	6883	6881	6660
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_4	59575964	59576195	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16452	5661	5450	5341
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_5	59576383	59577749	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15664	5314	5312	5038
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_6	59578021	59578857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16385	5636	5354	5395
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_7	59579013	59579203	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_8	59579357	59582850	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17206	5767	5856	5583
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_9	59583018	59585326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15738	5232	5305	5201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	junction_10	59585509	59586010	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17851	6137	5982	5732
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027301	chr9	-	junction_1	59645152	59657860	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	38	17	12	9
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027309	chr9	-	junction_1	61820804	61821169	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12248	4071	4254	3923
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027309	chr9	-	junction_2	61821242	61821638	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	2	1164	612	0	552
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	junction_1	64080716	64082105	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17440	5844	5837	5759
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	junction_2	64082278	64082475	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18963	6422	6429	6112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	junction_3	64082583	64082865	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16882	5752	5777	5353
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	junction_4	64083005	64083373	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	21033	7057	7142	6834
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	junction_5	64083499	64084222	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18488	6239	6288	5961
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	junction_6	64084353	64084602	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17449	5886	5876	5687
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	junction_7	64084760	64085002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20903	7048	7065	6790
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	junction_8	64085087	64085182	?????	novel	known	novel	0	-4	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	junction_9	64085300	64085504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19805	6691	6679	6435
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027372	chr9	+	junction_1	64084760	64085002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20903	7048	7065	6790
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027372	chr9	+	junction_2	64085087	64085178	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19599	6761	6585	6253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027372	chr9	+	junction_3	64085300	64085504	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	19805	6691	6679	6435
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027397	chr9	+	junction_1	64195526	64197655	?????	novel	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	80	36	23	21
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027397	chr9	+	junction_2	64197732	64201291	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2389	800	817	772
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027397	chr9	+	junction_3	64201415	64201604	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2729	948	927	854
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027397	chr9	+	junction_4	64201669	64208323	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2228	768	756	704
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027397	chr9	+	junction_5	64208531	64211588	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2343	782	734	827
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027410	chr9	-	junction_1	64624271	64632783	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1008	366	327	315
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027410	chr9	-	junction_2	64632865	64633905	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	939	312	322	305
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027410	chr9	-	junction_3	64634100	64635515	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	899	308	308	283
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027410	chr9	-	junction_4	64635712	64644865	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	952	289	316	347
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027580	chr9	+	junction_1	78105659	78106771	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3244	1085	1062	1097
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027580	chr9	+	junction_2	78106824	78111513	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3330	1108	1093	1129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027580	chr9	+	junction_3	78111647	78113193	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3751	1215	1290	1246
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027580	chr9	+	junction_4	78113336	78115082	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2950	951	1010	989
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027580	chr9	+	junction_5	78115215	78116338	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3356	1137	1105	1114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027610	chr9	-	junction_1	78274577	78275002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	178157	62171	55892	60094
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027610	chr9	-	junction_2	78275151	78275266	?????	novel	novel	known	-35	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	7420	2619	2323	2478
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027611	chr9	-	junction_1	78274577	78275002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	178157	62171	55892	60094
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027611	chr9	-	junction_2	78275186	78275271	?????	novel	known	novel	0	-5	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027613	chr9	-	junction_1	78274577	78275002	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	178157	62171	55892	60094
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027644	chr9	-	junction_1	78386141	78386239	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15409	5116	5301	4992
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027644	chr9	-	junction_2	78386475	78386559	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15744	5336	5214	5194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027644	chr9	-	junction_3	78386817	78386905	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11573	3957	3841	3775
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027644	chr9	-	junction_4	78387057	78387133	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13623	4644	4622	4357
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027644	chr9	-	junction_5	78387431	78387522	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12542	4182	4229	4131
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027644	chr9	-	junction_6	78387703	78387801	?????	novel	known	novel	0	-9	TRUE	GCAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027656	chr9	-	junction_1	78386141	78386239	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15409	5116	5301	4992
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027656	chr9	-	junction_2	78386475	78386559	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15744	5336	5214	5194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027656	chr9	-	junction_3	78386817	78386905	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11573	3957	3841	3775
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027656	chr9	-	junction_4	78387057	78387141	?????	novel	known	novel	0	-8	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027656	chr9	-	junction_5	78387431	78387522	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12542	4182	4229	4131
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027656	chr9	-	junction_6	78387703	78387788	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027660	chr9	-	junction_1	78386141	78386239	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15409	5116	5301	4992
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027660	chr9	-	junction_2	78386475	78386559	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15744	5336	5214	5194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027660	chr9	-	junction_3	78386817	78386905	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11573	3957	3841	3775
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027660	chr9	-	junction_4	78387057	78387133	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13623	4644	4622	4357
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027660	chr9	-	junction_5	78387431	78387518	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027660	chr9	-	junction_6	78387703	78387788	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027660	chr9	-	junction_7	78387971	78388920	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9075	2982	3190	2903
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027733	chr9	-	junction_1	88403502	88403970	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	461	148	158	155
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027733	chr9	-	junction_2	88404029	88404357	?????	novel	known	novel	0	2	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027733	chr9	-	junction_3	88404435	88404536	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1190	406	404	380
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027765	chr9	+	junction_1	92132414	92140100	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	304	115	98	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027765	chr9	+	junction_2	92140128	92141326	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	338	122	111	105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027765	chr9	+	junction_3	92141408	92145085	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	339	108	113	118
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027765	chr9	+	junction_4	92145335	92146698	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027765	chr9	+	junction_5	92146742	92148443	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	193	44	43	106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027765	chr9	+	junction_6	92148665	92148764	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	289	95	82	112
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027765	chr9	+	junction_7	92148927	92151867	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	313	109	99	105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027765	chr9	+	junction_8	92152030	92153581	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	323	111	116	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027769	chr9	-	junction_1	94402700	94406444	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	141	49	50	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027769	chr9	-	junction_2	94406749	94419271	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	138	40	69	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027796	chr9	-	junction_1	98470980	98472087	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	544	190	170	184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027796	chr9	-	junction_2	98472197	98474607	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	442	154	149	139
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027796	chr9	-	junction_3	98474754	98476125	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	548	193	174	181
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027796	chr9	-	junction_4	98476210	98476722	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	588	211	195	182
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027796	chr9	-	junction_5	98476867	98478872	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	515	200	156	159
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027796	chr9	-	junction_6	98479038	98480187	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	535	178	182	175
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027796	chr9	-	junction_7	98480352	98483525	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	555	176	194	185
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027855	chr9	+	junction_1	106048579	106053811	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	251	90	75	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027855	chr9	+	junction_2	106053910	106057764	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	274	107	83	84
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027855	chr9	+	junction_3	106057832	106060814	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	208	87	64	57
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027855	chr9	+	junction_4	106060915	106061378	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	211	81	66	64
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027855	chr9	+	junction_5	106061496	106061881	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	251	86	80	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027855	chr9	+	junction_6	106062038	106062447	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	266	108	72	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027855	chr9	+	junction_7	106062518	106063568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	270	95	84	91
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027855	chr9	+	junction_8	106063712	106065794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	263	84	90	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027861	chr9	+	junction_1	106080484	106084087	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	302	94	106	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027861	chr9	+	junction_2	106084166	106088917	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	312	105	113	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027861	chr9	+	junction_3	106089097	106089454	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	327	114	120	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027861	chr9	+	junction_4	106089551	106089930	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	378	129	132	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027861	chr9	+	junction_5	106090036	106090136	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	397	138	131	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027861	chr9	+	junction_6	106090263	106091299	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	330	103	122	105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027861	chr9	+	junction_7	106091451	106091554	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	340	119	122	99
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027861	chr9	+	junction_8	106091677	106092026	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	299	104	105	90
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027915	chr9	+	junction_1	107440732	107441774	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	242	72	82	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027915	chr9	+	junction_2	107441896	107442045	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	251	90	80	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_1	108447275	108447348	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	140	44	59	37
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_2	108447645	108447762	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	136	36	57	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_3	108448014	108448090	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	157	45	59	53
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_4	108448171	108448243	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	142	39	55	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_5	108448373	108448644	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	130	34	44	52
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_6	108448719	108448811	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	128	49	40	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_7	108448874	108448980	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	155	48	61	46
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_8	108449064	108449139	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	83	32	30	21
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_9	108449317	108449385	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	110	32	39	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_10	108449497	108449591	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	142	49	60	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	junction_11	108449661	108449749	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	192	61	83	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_1	108569912	108591471	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	357	120	123	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_2	108591508	108594061	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	420	147	135	138
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_3	108594115	108596401	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	359	126	113	120
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_4	108596486	108605372	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	315	103	114	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_5	108605480	108610308	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	311	98	120	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_6	108610463	108617633	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	361	107	148	106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_7	108617736	108617886	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	310	96	116	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_8	108617962	108621428	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	368	114	137	117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_9	108621495	108622680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	373	124	142	107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	junction_10	108622823	108624059	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	411	144	152	115
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_1	108765856	108766083	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6039	2086	1974	1979
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_2	108766225	108771151	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6062	2128	1875	2059
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_3	108771239	108773111	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5755	1998	1836	1921
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_4	108773242	108773757	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6290	2179	1994	2117
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_5	108773957	108774427	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6356	2171	2053	2132
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_6	108774508	108776005	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5936	2063	1924	1949
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_7	108776122	108776403	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6057	2121	1949	1987
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_8	108776548	108776665	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6476	2267	2068	2141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_9	108776827	108776923	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6182	2193	1993	1996
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_10	108777010	108777612	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6330	2245	2116	1969
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_11	108777702	108778009	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	junction_12	108778083	108778502	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6174	2169	1977	2028
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028048	chr9	+	junction_1	108918716	108919908	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	81	30	28	23
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028048	chr9	+	junction_2	108920074	108920582	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	83	22	35	26
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028082	chr9	+	junction_1	110485727	110521383	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	758	256	240	262
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028082	chr9	+	junction_2	110521452	110537513	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	732	231	245	256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028082	chr9	+	junction_3	110537594	110538961	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	695	234	233	228
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028082	chr9	+	junction_4	110539024	110539194	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	709	232	234	243
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028082	chr9	+	junction_5	110539230	110540153	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	736	244	242	250
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028082	chr9	+	junction_6	110540231	110540318	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	699	243	222	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028105	chr9	-	junction_1	114204651	114207107	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	663	215	221	227
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028105	chr9	-	junction_2	114207192	114208977	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	656	203	233	220
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028105	chr9	-	junction_3	114209124	114210653	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	611	201	233	177
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028105	chr9	-	junction_4	114210783	114213763	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	595	186	235	174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028105	chr9	-	junction_5	114213936	114215269	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	526	183	190	153
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028105	chr9	-	junction_6	114215420	114219199	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	570	174	209	187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028128	chr9	-	junction_1	114586360	114587872	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1122	389	367	366
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028128	chr9	-	junction_2	114587955	114590974	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1350	480	451	419
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028128	chr9	-	junction_3	114591074	114592286	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1395	488	475	432
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028128	chr9	-	junction_4	114592461	114610735	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1444	505	499	440
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028169	chr9	+	junction_1	119956897	119957522	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3720	1162	1348	1210
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028169	chr9	+	junction_2	119957689	119958223	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3934	1316	1384	1234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028169	chr9	+	junction_3	119958347	119959183	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028169	chr9	+	junction_4	119959430	119959833	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5375	1753	1876	1746
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028169	chr9	+	junction_5	119959963	119960065	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5494	1761	1963	1770
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028169	chr9	+	junction_6	119960232	119960465	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5877	2003	1987	1887
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028200	chr9	+	junction_1	120401264	120401833	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17817	5804	6229	5784
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028200	chr9	+	junction_2	120401929	120402641	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16569	5425	5903	5241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028200	chr9	+	junction_3	120402742	120402833	?????	novel	known	novel	0	-4	TRUE	GTAG	canonical	TRUE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028200	chr9	+	junction_4	120402884	120403160	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15430	4951	5530	4949
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028226	chr9	+	junction_1	121539538	121539704	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	377	135	122	120
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028226	chr9	+	junction_2	121539782	121541630	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	419	148	143	128
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028254	chr9	-	junction_1	123529169	123529934	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	95	33	33	29
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028254	chr9	-	junction_2	123530039	123531189	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	113	37	43	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028254	chr9	-	junction_3	123531367	123536973	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	99	30	44	25
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028254	chr9	-	junction_4	123537052	123537137	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	93	26	36	31
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028254	chr9	-	junction_5	123537204	123538618	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	115	33	40	42
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028254	chr9	-	junction_6	123538691	123540100	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	103	27	44	32
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028254	chr9	-	junction_7	123540162	123541494	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	100	31	39	30
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028254	chr9	-	junction_8	123541690	123544364	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	101	34	34	33
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028303	chrUn_MU069435v1	+	junction_1	3351	3591	?????	novel	novel	novel	NA	NA	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	139	43	46	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028304	chrUn_MU069435v1	+	junction_1	3351	3591	?????	novel	novel	novel	NA	NA	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	139	43	46	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028304	chrUn_MU069435v1	+	junction_2	3670	7233	?????	novel	novel	novel	NA	NA	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	358	109	134	115
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028309	chrUn_MU069435v1	+	junction_1	15016	21676	?????	novel	novel	novel	NA	NA	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	30	13	8	9
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028383	chrX	-	junction_1	8009195	8009489	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	855	291	293	271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028383	chrX	-	junction_2	8009565	8009896	?????	novel	novel	known	-4	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	2	44	17	27	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028383	chrX	-	junction_3	8009991	8010086	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1315	410	499	406
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028383	chrX	-	junction_4	8010187	8010811	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	925	324	319	282
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028383	chrX	-	junction_5	8010919	8011193	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1120	343	389	388
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028383	chrX	-	junction_6	8011312	8011876	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1172	365	461	346
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028385	chrX	-	junction_1	8022306	8022554	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	134	47	48	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028385	chrX	-	junction_2	8022744	8022889	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	144	52	57	35
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028385	chrX	-	junction_3	8023018	8038976	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	152	50	52	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028385	chrX	-	junction_4	8039132	8040439	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	121	31	51	39
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028385	chrX	-	junction_5	8040550	8041949	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	147	53	51	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_1	13147397	13150416	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	179	69	54	56
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_2	13150475	13151153	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	187	72	52	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_3	13151202	13152272	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	213	82	65	66
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_4	13152406	13153463	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	219	75	74	70
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_5	13153623	13153702	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	263	93	88	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_6	13153803	13154023	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	259	75	95	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_7	13154160	13154517	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	321	104	115	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_8	13154604	13154811	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	307	92	112	103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_9	13154911	13155018	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	313	100	108	105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_10	13155180	13155633	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	345	99	137	109
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_11	13155779	13156075	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	337	116	116	105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_12	13156221	13156417	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	404	134	135	135
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_13	13156600	13156684	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	467	168	155	144
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_14	13156803	13157139	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	406	149	153	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_15	13157294	13157401	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	424	153	145	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	junction_16	13157542	13157651	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	520	176	189	155
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_1	16486153	16500420	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	259	100	84	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_2	16500516	16505302	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	229	82	76	71
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_3	16505441	16524806	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	235	83	67	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_4	16524912	16525683	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	234	79	68	87
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_5	16525776	16528555	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	226	80	67	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_6	16528698	16530889	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	241	86	73	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_7	16531040	16531890	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	197	76	52	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_8	16532051	16539085	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	243	87	71	85
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_9	16539183	16543793	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	253	93	78	82
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_10	16543848	16547052	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	240	86	71	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_11	16547111	16548439	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	243	89	73	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_12	16548538	16550202	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	279	98	85	96
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_13	16550315	16551220	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	263	97	80	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	junction_14	16551284	16551470	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	297	108	91	98
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028511	chrX	+	junction_1	35862268	35865775	?????	novel	known	novel	0	-2	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028511	chrX	+	junction_2	35865930	35868440	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	538	182	194	162
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028535	chrX	-	junction_1	36346403	36347637	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12849	4230	4418	4201
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028535	chrX	-	junction_2	36347742	36348777	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12919	4314	4474	4131
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028541	chrX	-	junction_1	36356315	36359174	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	274	97	94	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028631	chrX	-	junction_1	51361832	51403713	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	292	98	93	101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028631	chrX	-	junction_2	51403874	51454598	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	242	76	74	92
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028631	chrX	-	junction_3	51454720	51476985	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	268	82	100	86
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028631	chrX	-	junction_4	51477112	51485949	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	253	83	92	78
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028631	chrX	-	junction_5	51486084	51517316	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	268	93	87	88
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028631	chrX	-	junction_6	51518012	51671673	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	233	84	79	70
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028631	chrX	-	junction_7	51671836	51702509	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	258	88	89	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028647	chrX	+	junction_1	52727016	52729333	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	169	63	58	48
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028647	chrX	+	junction_2	52729516	52735693	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	164	60	61	43
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028647	chrX	+	junction_3	52735827	52738241	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	140	38	48	54
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028647	chrX	+	junction_4	52738355	52739632	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	124	34	40	50
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028656	chrX	-	junction_1	52745154	52745318	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1593	567	511	515
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028656	chrX	-	junction_2	52745424	52747619	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1241	445	433	363
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028656	chrX	-	junction_3	52747719	52748908	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1225	425	404	396
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028656	chrX	-	junction_4	52749009	52749789	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1238	431	394	413
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028656	chrX	-	junction_5	52749908	52752956	?????	novel	known	novel	0	33	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028656	chrX	-	junction_6	52753054	52753476	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1270	420	411	439
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028656	chrX	-	junction_7	52753824	52759728	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1510	513	505	492
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028666	chrX	-	junction_1	52786140	52786458	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	257	85	83	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028666	chrX	-	junction_2	52786558	52789056	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	302	95	99	108
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028666	chrX	-	junction_3	52789157	52789849	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	319	112	94	113
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028666	chrX	-	junction_4	52789968	52797434	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	263	93	89	81
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028666	chrX	-	junction_5	52797470	52797739	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	282	95	94	93
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028666	chrX	-	junction_6	52797804	52798109	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	281	90	102	89
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028666	chrX	-	junction_7	52798188	52799598	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	140	38	49	53
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028719	chrX	-	junction_1	68649598	68649712	?????	novel	novel	novel	60722	-61698	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028722	chrX	+	junction_1	69429758	69431499	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	343	125	118	100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028722	chrX	+	junction_2	69431773	69432477	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	346	128	114	104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028770	chrX	-	junction_1	72299035	72299128	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	958	332	316	310
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028770	chrX	-	junction_2	72299225	72301241	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	944	326	314	304
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028770	chrX	-	junction_3	72301341	72302698	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1234	416	408	410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028770	chrX	-	junction_4	72302799	72303613	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	886	318	284	284
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028770	chrX	-	junction_5	72303732	72305110	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	686	241	226	219
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028770	chrX	-	junction_6	72305146	72306028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1778	599	593	586
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028770	chrX	-	junction_7	72306099	72306921	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1788	620	622	546
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028770	chrX	-	junction_8	72307059	72308956	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1081	362	380	339
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028779	chrX	+	junction_1	72683248	72683798	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	583	191	202	190
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028779	chrX	+	junction_2	72684411	72684952	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	606	210	209	187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028779	chrX	+	junction_3	72685409	72685689	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	590	226	187	177
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028838	chrX	-	junction_1	73080101	73080587	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	222	66	77	79
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028838	chrX	-	junction_2	73080939	73129115	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	119	30	49	40
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028858	chrX	+	junction_1	73314631	73315265	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7516	2498	2564	2454
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028858	chrX	+	junction_2	73315325	73315405	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9603	3122	3362	3119
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028858	chrX	+	junction_3	73315514	73315784	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9221	3011	3293	2917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028858	chrX	+	junction_4	73315924	73316277	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9774	3177	3542	3055
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028858	chrX	+	junction_5	73316445	73316520	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028866	chrX	+	junction_1	73316441	73316520	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9593	3196	3413	2984
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028976	chrX	+	junction_1	93410769	93423531	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	325	108	123	94
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028976	chrX	+	junction_2	93423640	93425716	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	461	146	155	160
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028976	chrX	+	junction_3	93425837	93431270	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	462	158	157	147
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028976	chrX	+	junction_4	93431326	93434350	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	483	162	165	156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028976	chrX	+	junction_5	93434447	93437794	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	436	136	146	154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028976	chrX	+	junction_6	93437887	93441727	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	468	157	155	156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028976	chrX	+	junction_7	93441809	93456065	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	447	157	143	147
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028976	chrX	+	junction_8	93456132	93460447	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	367	126	121	120
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_1	100123199	100123305	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1497	465	559	473
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_2	100123415	100123706	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1499	476	544	479
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_3	100123874	100124313	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1483	503	512	468
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_4	100124478	100125301	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1326	451	458	417
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_5	100125405	100125498	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1552	517	537	498
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_6	100125639	100125796	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1446	499	482	465
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_7	100126020	100126139	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1381	444	495	442
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_8	100126253	100126396	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1447	458	530	459
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_9	100126575	100126753	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1411	476	494	441
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_10	100126913	100127476	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1471	498	510	463
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	junction_11	100127881	100128877	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1250	425	462	363
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029077	chrX	-	junction_1	101228738	101229108	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16896	5698	5689	5509
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029077	chrX	-	junction_2	101229267	101230001	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	17005	5747	5702	5556
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029077	chrX	-	junction_3	101230174	101230960	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15566	5188	5240	5138
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029077	chrX	-	junction_4	101231059	101231423	?????	novel	known	novel	0	4	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029077	chrX	-	junction_5	101231609	101231899	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	16172	5416	5374	5382
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029144	chrX	+	junction_1	111221134	111243497	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	334	105	104	125
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029144	chrX	+	junction_2	111243603	111255934	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	451	151	158	142
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029144	chrX	+	junction_3	111256055	111259497	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	415	123	162	130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029144	chrX	+	junction_4	111259553	111260996	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	422	129	152	141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029144	chrX	+	junction_5	111261096	111263857	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	399	108	145	146
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029144	chrX	+	junction_6	111263950	111273853	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	379	110	129	140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029144	chrX	+	junction_7	111273968	111274162	?????	novel	known	novel	0	-4	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029144	chrX	+	junction_8	111274268	111281890	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	441	143	153	145
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029162	chrX	+	junction_1	133486469	133486826	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11259	3734	3883	3642
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029162	chrX	+	junction_2	133486933	133487259	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	13865	4710	4609	4546
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029162	chrX	+	junction_3	133487332	133488199	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029162	chrX	+	junction_4	133488323	133488685	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10431	3516	3462	3453
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029191	chrX	-	junction_1	134967957	134968348	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	969	324	314	331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029191	chrX	-	junction_2	134968422	134968799	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	901	302	306	293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029203	chrX	+	junction_1	135039916	135040271	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4297	1409	1453	1435
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029203	chrX	+	junction_2	135040353	135040603	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029265	chrX	-	junction_1	135856232	135857483	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	220	70	75	75
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029265	chrX	-	junction_2	135857589	135858647	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	182	52	71	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029432	chrX	+	junction_1	163206360	163210927	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	160	49	65	46
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029432	chrX	+	junction_2	163211061	163211535	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	227	80	88	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029432	chrX	+	junction_3	163211669	163211806	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	233	84	80	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029432	chrX	+	junction_4	163212014	163214625	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	99	107	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029434	chrX	+	junction_1	163205983	163210927	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	48	18	17	13
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029434	chrX	+	junction_2	163211061	163211535	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	227	80	88	59
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029434	chrX	+	junction_3	163211669	163211806	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	233	84	80	69
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029434	chrX	+	junction_4	163212014	163214625	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	278	99	107	72
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029451	chrX	-	junction_1	165990532	165990932	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1191	355	436	400
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029451	chrX	-	junction_2	165991048	165992101	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1242	363	451	428
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029467	chrY	+	junction_1	90795676	90795777	?????	novel	novel	novel	-416	1081	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	498	158	184	156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029467	chrY	+	junction_2	90795948	90796858	?????	novel	novel	known	-144	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	3	234	72	99	63
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029467	chrY	+	junction_3	90797249	90804564	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	607	182	231	194
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029467	chrY	+	junction_4	90804687	90827617	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2023	579	793	651
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029482	SIRV1	-	junction_1	1485	7552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	905	332	300	273
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029482	SIRV1	-	junction_2	7801	10542	?????	novel	novel	novel	-8	11	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029500	SIRV1	-	junction_1	1485	6337	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4191	1464	1381	1346
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029500	SIRV1	-	junction_2	6474	6557	?????	novel	known	novel	0	3	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029500	SIRV1	-	junction_3	6814	7552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6031	2137	1959	1935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029500	SIRV1	-	junction_4	7815	10282	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5875	2082	1944	1849
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029500	SIRV1	-	junction_5	10367	10444	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1499	525	504	470
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029501	SIRV1	-	junction_1	1485	6337	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4191	1464	1381	1346
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029501	SIRV1	-	junction_2	6474	6560	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1611	565	572	474
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029501	SIRV1	-	junction_3	6814	7552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6031	2137	1959	1935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029501	SIRV1	-	junction_4	7815	10282	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5875	2082	1944	1849
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029501	SIRV1	-	junction_5	10367	10447	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029511	SIRV1	-	junction_1	1485	6337	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4191	1464	1381	1346
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029511	SIRV1	-	junction_2	6814	7552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6031	2137	1959	1935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029511	SIRV1	-	junction_3	7815	10282	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5875	2082	1944	1849
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029515	SIRV1	-	junction_1	6474	6560	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1611	565	572	474
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029515	SIRV1	-	junction_2	6814	7552	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6031	2137	1959	1935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029515	SIRV1	-	junction_3	7815	10282	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5875	2082	1944	1849
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029515	SIRV1	-	junction_4	10367	10593	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1547	542	503	502
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029527	SIRV1	+	junction_1	10792	10882	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3891	1320	1318	1253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029527	SIRV1	+	junction_2	11058	11434	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3494	1203	1247	1044
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_1	1662	1741	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	416	133	157	126
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_2	1854	1973	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	484	146	182	156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_3	2065	2674	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	460	167	163	130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_4	2803	2881	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	377	134	141	102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_5	3011	3105	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	378	121	143	114
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_6	3326	3665	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	173	54	73	46
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_7	3826	3966	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2423	834	844	745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_8	4095	4338	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2395	861	797	737
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_9	4480	4687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2819	943	959	917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	junction_10	4801	5788	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	342	110	126	106
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029552	SIRV2	-	junction_1	3826	3969	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029552	SIRV2	-	junction_2	4480	4687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2819	943	959	917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029551	SIRV2	-	junction_1	3826	3966	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2423	834	844	745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029551	SIRV2	-	junction_2	4480	4687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2819	943	959	917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029561	SIRV2	-	junction_1	3826	3969	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029561	SIRV2	-	junction_2	4095	4338	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2395	861	797	737
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029561	SIRV2	-	junction_3	4480	4687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2819	943	959	917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029561	SIRV2	-	junction_4	4801	5751	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2087	694	686	707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029562	SIRV2	-	junction_1	3826	3963	?????	novel	known	novel	0	3	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029562	SIRV2	-	junction_2	4095	4338	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2395	861	797	737
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029562	SIRV2	-	junction_3	4480	4687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2819	943	959	917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029562	SIRV2	-	junction_4	4801	5751	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2087	694	686	707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029563	SIRV2	-	junction_1	3826	3966	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2423	834	844	745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029563	SIRV2	-	junction_2	4095	4342	?????	novel	known	novel	0	-4	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029563	SIRV2	-	junction_3	4480	4687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2819	943	959	917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029563	SIRV2	-	junction_4	4801	5751	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2087	694	686	707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029560	SIRV2	-	junction_1	3826	3966	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2423	834	844	745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029560	SIRV2	-	junction_2	4095	4338	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2395	861	797	737
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029560	SIRV2	-	junction_3	4480	4687	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2819	943	959	917
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029560	SIRV2	-	junction_4	4801	5751	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2087	694	686	707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029575	SIRV3	-	junction_1	1168	1532	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5391	1907	1737	1747
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029575	SIRV3	-	junction_2	1765	1902	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	5425	1885	1745	1795
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029579	SIRV3	+	junction_1	2006	4003	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3196	1097	1067	1032
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029579	SIRV3	+	junction_2	4081	6057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	759	269	256	234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029585	SIRV3	+	junction_1	2006	4568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1857	631	657	569
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029585	SIRV3	+	junction_2	4780	6057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2821	960	958	903
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029585	SIRV3	+	junction_3	7989	8127	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1234	433	399	402
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029585	SIRV3	+	junction_4	8208	8755	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2232	763	789	680
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029597	SIRV3	+	junction_1	2006	4003	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3196	1097	1067	1032
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029597	SIRV3	+	junction_2	4081	4568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3266	1087	1132	1047
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029597	SIRV3	+	junction_3	4780	6057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2821	960	958	903
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029597	SIRV3	+	junction_4	6334	7270	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1153	384	378	391
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029597	SIRV3	+	junction_5	7363	7861	?????	novel	novel	novel	-4	11	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029597	SIRV3	+	junction_6	7989	8124	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1134	386	381	367
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029597	SIRV3	+	junction_7	8208	8755	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2232	763	789	680
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029599	SIRV3	+	junction_1	2006	4003	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3196	1097	1067	1032
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029599	SIRV3	+	junction_2	4081	4568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3266	1087	1132	1047
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029599	SIRV3	+	junction_3	4780	6057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2821	960	958	903
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029599	SIRV3	+	junction_4	6334	7270	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1153	384	378	391
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029599	SIRV3	+	junction_5	7363	7861	?????	novel	novel	novel	-4	11	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029599	SIRV3	+	junction_6	7987	8117	?????	novel	novel	novel	-2	7	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029599	SIRV3	+	junction_7	8208	8755	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2232	763	789	680
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029598	SIRV3	+	junction_1	2006	4003	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3196	1097	1067	1032
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029598	SIRV3	+	junction_2	4081	4574	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1440	513	482	445
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029598	SIRV3	+	junction_3	4775	6057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1417	503	481	433
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029598	SIRV3	+	junction_4	6334	8755	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1252	420	437	395
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029600	SIRV3	+	junction_1	2006	4003	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3196	1097	1067	1032
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029600	SIRV3	+	junction_2	4076	4574	?????	novel	novel	known	-5	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029600	SIRV3	+	junction_3	4775	6057	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1417	503	481	433
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029600	SIRV3	+	junction_4	6334	8755	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1252	420	437	395
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029614	SIRV3	+	junction_1	4081	4568	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3266	1087	1132	1047
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029614	SIRV3	+	junction_2	4780	6570	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1609	576	526	507
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029628	SIRV3	-	junction_1	8976	9189	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1426	474	464	488
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029628	SIRV3	-	junction_2	9299	9434	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1394	474	467	453
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029632	SIRV4	+	junction_1	1344	1678	?????	novel	novel	known	-3	0	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029632	SIRV4	+	junction_2	1886	2389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1019	349	324	346
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029634	SIRV4	+	junction_1	1347	1678	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1042	380	335	327
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029634	SIRV4	+	junction_2	1886	2389	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1019	349	324	346
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029641	SIRV4	-	junction_1	4104	5007	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2584	912	816	856
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029645	SIRV4	-	junction_1	8373	8629	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4098	1409	1306	1383
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029645	SIRV4	-	junction_2	8991	13672	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7498	2582	2404	2512
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029645	SIRV4	-	junction_3	13823	14592	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	669	219	228	222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029649	SIRV4	-	junction_1	8991	13672	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7498	2582	2404	2512
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_1	1150	1985	?????	novel	known	novel	0	2	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_2	2034	2119	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11429	4044	3758	3627
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_3	2157	2270	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10810	3888	3486	3436
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_4	2316	3298	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9938	3497	3257	3184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_5	3405	3483	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9639	3333	3152	3154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_6	3644	5380	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7740	2710	2562	2468
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_7	5451	5543	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7249	2490	2428	2331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_8	5627	6111	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7350	2552	2489	2309
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_9	6170	6327	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6602	2225	2219	2158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_10	6453	6658	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2297	765	799	733
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_11	6723	6826	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2427	818	828	781
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_12	6958	7144	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6854	2350	2348	2156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_13	7308	7681	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7520	2661	2453	2406
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_14	7763	7870	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7166	2515	2420	2231
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_15	8382	8454	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9266	3259	3035	2972
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	junction_16	8586	10858	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11825	4134	3926	3765
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_1	1150	1985	?????	novel	known	novel	0	2	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_2	2034	2119	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11429	4044	3758	3627
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_3	2157	2270	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10810	3888	3486	3436
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_4	2489	3298	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	681	266	212	203
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_5	3405	3483	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9639	3333	3152	3154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_6	3644	5380	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7740	2710	2562	2468
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_7	5451	5543	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7249	2490	2428	2331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_8	5627	6111	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7350	2552	2489	2309
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_9	6170	6327	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6602	2225	2219	2158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_10	6453	6658	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2297	765	799	733
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_11	6723	6826	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2427	818	828	781
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_12	6958	7144	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	6854	2350	2348	2156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_13	7308	7681	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7520	2661	2453	2406
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_14	7763	7870	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	7166	2515	2420	2231
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_15	8017	8277	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1808	610	661	537
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_16	8382	8454	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9266	3259	3035	2972
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	junction_17	8586	10858	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11825	4134	3926	3765
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029674	SIRV5	+	junction_1	1150	1925	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3871	1335	1313	1223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029674	SIRV5	+	junction_2	2034	2119	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11429	4044	3758	3627
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029674	SIRV5	+	junction_3	2157	2270	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	10810	3888	3486	3436
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029674	SIRV5	+	junction_4	2316	3298	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9938	3497	3257	3184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029674	SIRV5	+	junction_5	3405	3483	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9639	3333	3152	3154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029676	SIRV5	+	junction_1	1150	1925	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3871	1335	1313	1223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029676	SIRV5	+	junction_2	2048	2270	?????	novel	novel	known	14	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029676	SIRV5	+	junction_3	2316	3298	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9938	3497	3257	3184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029676	SIRV5	+	junction_4	3405	3483	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	9639	3333	3152	3154
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029699	SIRV5	+	junction_1	8586	10858	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	11825	4134	3926	3765
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	junction_1	1187	1468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25662	8949	8219	8494
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	junction_2	1535	1640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	27542	9554	8961	9027
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	junction_3	1736	1845	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15063	5246	4882	4935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	junction_4	2027	2470	?????	known	known	known	0	0	FALSE	GCAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	junction_5	2621	2740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12902	4493	4244	4165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	junction_6	2829	3106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20930	7398	6811	6721
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	junction_7	3165	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18415	6498	5882	6035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	junction_8	10819	11031	?????	known	known	known	0	0	FALSE	GTAG	canonical	TRUE	NA	NA	NA	3	23098	8208	7145	7745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	junction_9	11109	11205	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18822	6594	5935	6293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029744	SIRV6	+	junction_1	1187	1468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25662	8949	8219	8494
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029744	SIRV6	+	junction_2	1736	1845	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15063	5246	4882	4935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029744	SIRV6	+	junction_3	2027	2470	?????	known	known	known	0	0	FALSE	GCAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029745	SIRV6	+	junction_1	1187	1468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25662	8949	8219	8494
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029745	SIRV6	+	junction_2	1736	1845	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15063	5246	4882	4935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029745	SIRV6	+	junction_3	2035	2470	?????	novel	novel	known	8	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029746	SIRV6	+	junction_1	1187	1468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25662	8949	8219	8494
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029746	SIRV6	+	junction_2	1535	1640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	27542	9554	8961	9027
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029746	SIRV6	+	junction_3	1736	1845	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15063	5246	4882	4935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029746	SIRV6	+	junction_4	2027	2470	?????	known	known	known	0	0	FALSE	GCAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029746	SIRV6	+	junction_5	2621	2740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12902	4493	4244	4165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029746	SIRV6	+	junction_6	2829	3106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20930	7398	6811	6721
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029746	SIRV6	+	junction_7	3165	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18415	6498	5882	6035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029746	SIRV6	+	junction_8	10819	11031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23098	8208	7145	7745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029764	SIRV6	+	junction_1	1187	1468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25662	8949	8219	8494
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029764	SIRV6	+	junction_2	1535	1640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	27542	9554	8961	9027
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029764	SIRV6	+	junction_3	1736	1845	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	15063	5246	4882	4935
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029768	SIRV6	+	junction_1	1187	1468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	25662	8949	8219	8494
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029768	SIRV6	+	junction_2	1535	1640	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	27542	9554	8961	9027
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029768	SIRV6	+	junction_3	1736	1856	?????	novel	known	novel	0	-11	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029777	SIRV6	+	junction_1	1382	1468	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2656	907	922	827
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029777	SIRV6	+	junction_2	1535	1642	?????	novel	known	novel	0	-2	TRUE	GTAG	canonical	FALSE	NA	NA	NA	1	2	0	0	2
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029784	SIRV6	+	junction_1	2621	2740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12902	4493	4244	4165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029784	SIRV6	+	junction_2	2815	3106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	918	315	314	289
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029784	SIRV6	+	junction_3	3165	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18415	6498	5882	6035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029785	SIRV6	+	junction_1	2621	2740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12902	4493	4244	4165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029785	SIRV6	+	junction_2	2829	3106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20930	7398	6811	6721
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029785	SIRV6	+	junction_3	3165	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18415	6498	5882	6035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029785	SIRV6	+	junction_4	11109	11205	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18822	6594	5935	6293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029791	SIRV6	+	junction_1	2621	2740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12902	4493	4244	4165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029791	SIRV6	+	junction_2	2815	3106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	918	315	314	289
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029791	SIRV6	+	junction_3	3171	10724	?????	novel	novel	known	6	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029794	SIRV6	+	junction_1	2621	2737	?????	novel	known	novel	0	3	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029794	SIRV6	+	junction_2	2829	3106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20930	7398	6811	6721
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029794	SIRV6	+	junction_3	3165	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18415	6498	5882	6035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029794	SIRV6	+	junction_4	11109	11205	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18822	6594	5935	6293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029805	SIRV6	+	junction_1	2621	2740	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	12902	4493	4244	4165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029805	SIRV6	+	junction_2	2829	3106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20930	7398	6811	6721
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029805	SIRV6	+	junction_3	3165	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18415	6498	5882	6035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029805	SIRV6	+	junction_4	11114	11205	?????	novel	novel	known	5	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029809	SIRV6	+	junction_1	2621	2737	?????	novel	known	novel	0	3	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029809	SIRV6	+	junction_2	2829	3106	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	20930	7398	6811	6721
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029809	SIRV6	+	junction_3	3165	7805	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2976	998	1046	932
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029809	SIRV6	+	junction_4	7924	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3566	1247	1189	1130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029813	SIRV6	+	junction_1	3165	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18415	6498	5882	6035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029813	SIRV6	+	junction_2	10819	11031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23098	8208	7145	7745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029813	SIRV6	+	junction_3	11109	11205	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18822	6594	5935	6293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029817	SIRV6	+	junction_1	3165	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18415	6498	5882	6035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029817	SIRV6	+	junction_2	10819	11031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23098	8208	7145	7745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029817	SIRV6	+	junction_3	11114	11205	?????	novel	novel	known	5	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029822	SIRV6	+	junction_1	3165	7104	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	508	156	185	167
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029822	SIRV6	+	junction_2	7453	7805	?????	novel	novel	known	4	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029822	SIRV6	+	junction_3	7924	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3566	1247	1189	1130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029822	SIRV6	+	junction_4	10819	11031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23098	8208	7145	7745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029822	SIRV6	+	junction_5	11109	11205	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18822	6594	5935	6293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029824	SIRV6	+	junction_1	3165	7104	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	508	156	185	167
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029824	SIRV6	+	junction_2	7449	7805	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	472	159	155	158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029824	SIRV6	+	junction_3	7924	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3566	1247	1189	1130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029824	SIRV6	+	junction_4	10819	11031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23098	8208	7145	7745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029824	SIRV6	+	junction_5	11114	11205	?????	novel	novel	known	5	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029825	SIRV6	+	junction_1	3165	7104	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	508	156	185	167
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029825	SIRV6	+	junction_2	7449	7805	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	472	159	155	158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029825	SIRV6	+	junction_3	7924	10724	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3566	1247	1189	1130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029825	SIRV6	+	junction_4	10819	11031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23098	8208	7145	7745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029825	SIRV6	+	junction_5	11109	11205	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	18822	6594	5935	6293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029841	SIRV6	+	junction_1	10819	11031	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	23098	8208	7145	7745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029841	SIRV6	+	junction_2	11114	11205	?????	novel	novel	known	5	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029849	SIRV7	-	junction_1	2676	2993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3638	1282	1206	1150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029849	SIRV7	-	junction_2	3112	4095	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	392	119	144	129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029849	SIRV7	-	junction_3	4180	4725	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	229	74	78	77
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029849	SIRV7	-	junction_4	4811	43028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	252	80	89	83
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029849	SIRV7	-	junction_5	43078	114680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2069	726	716	627
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029850	SIRV7	-	junction_1	2676	2993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3638	1282	1206	1150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029850	SIRV7	-	junction_2	3112	3809	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1087	384	378	325
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029850	SIRV7	-	junction_3	3897	114680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1127	439	357	331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029850	SIRV7	-	junction_4	114989	147608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4927	1694	1660	1573
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029853	SIRV7	-	junction_1	2676	2993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3638	1282	1206	1150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029853	SIRV7	-	junction_2	3112	3809	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1087	384	378	325
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029853	SIRV7	-	junction_3	3897	114680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1127	439	357	331
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029853	SIRV7	-	junction_4	114989	147611	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029864	SIRV7	-	junction_1	2676	2993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3638	1282	1206	1150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029864	SIRV7	-	junction_2	3115	43028	?????	novel	novel	known	3	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029864	SIRV7	-	junction_3	43078	114680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2069	726	716	627
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029864	SIRV7	-	junction_4	114989	147608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4927	1694	1660	1573
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029865	SIRV7	-	junction_1	2676	2993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3638	1282	1206	1150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029865	SIRV7	-	junction_2	3112	43028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1923	675	651	597
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029865	SIRV7	-	junction_3	43078	114680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2069	726	716	627
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029865	SIRV7	-	junction_4	114989	147602	?????	novel	known	novel	0	6	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029867	SIRV7	-	junction_1	2676	2993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3638	1282	1206	1150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029867	SIRV7	-	junction_2	3112	43028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1923	675	651	597
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029867	SIRV7	-	junction_3	43078	114680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2069	726	716	627
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029867	SIRV7	-	junction_4	114989	147611	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029868	SIRV7	-	junction_1	2676	2993	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3638	1282	1206	1150
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029868	SIRV7	-	junction_2	3112	43028	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	1923	675	651	597
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029868	SIRV7	-	junction_3	43078	114680	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2069	726	716	627
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029868	SIRV7	-	junction_4	114989	147608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4927	1694	1660	1573
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029886	SIRV7	-	junction_1	56086	70877	?????	novel	novel	novel	-12	6	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029886	SIRV7	-	junction_2	70988	78841	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4788	1664	1525	1599
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029886	SIRV7	-	junction_3	78966	114680	?????	novel	novel	known	2	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029886	SIRV7	-	junction_4	114989	147608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4927	1694	1660	1573
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029888	SIRV7	-	junction_1	56098	70877	?????	novel	known	novel	0	6	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029888	SIRV7	-	junction_2	70988	78841	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4788	1664	1525	1599
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029888	SIRV7	-	junction_3	78966	114680	?????	novel	novel	known	2	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029888	SIRV7	-	junction_4	114989	147608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4927	1694	1660	1573
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029898	SIRV7	-	junction_1	56098	70877	?????	novel	known	novel	0	6	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029898	SIRV7	-	junction_2	70988	78841	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4788	1664	1525	1599
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029898	SIRV7	-	junction_3	78966	114680	?????	novel	novel	known	2	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029898	SIRV7	-	junction_4	114961	147608	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	2098	713	673	712
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029902	SIRV7	-	junction_1	56098	70883	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	3147	1114	979	1054
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029902	SIRV7	-	junction_2	70988	78841	?????	known	known	known	0	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	3	4788	1664	1525	1599
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029902	SIRV7	-	junction_3	78966	114680	?????	novel	novel	known	2	0	FALSE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029902	SIRV7	-	junction_4	114961	147611	?????	novel	known	novel	0	-3	TRUE	GTAG	canonical	FALSE	NA	NA	NA	0	0	0	0	0
