isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000031	chr1	-	392	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	10	-2	-4	0	multi-exon	FALSE	canonical	3	144	junction_1	223.143202649977	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	-13	True	AATAAA	-14	NA	10014332	10012247	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_10012375_10012547_10012617_10012834_10012943_10014244
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000048	chr1	-	2837	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	16	85	16	-85	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGCTGTTTCCTGAAC	9672	False	NA	-10	True	AATAAA	-13	NA	13660118	13635006	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000051	chr1	-	2971	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	8	1515	8	-1515	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730762	13695068	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000133	chr1	-	2842	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	10	1277	10	0	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTTTTCCTAGTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	30988826	30980660	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000134	chr1	-	2839	6	FSM	ENSMUSG00000117310.3	ENSMUST00000076587.6	2851	6	12	0	10	0	multi-exon	FALSE	canonical	3	443	junction_5	787.975024984929	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTTTTCCTAGTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	30988826	30980660	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985718_30988629
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000156	chr1	+	825	8	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	-1	5151	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_7	183.431464151645	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATACCAGTGGCCTCTCT	5802	False	NA	NA	False	NA	NA	NA	34479120	34493588	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34493524
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000169	chr1	-	2231	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	26	1121	12	0	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTGGCTCAGTGGCC	NA	False	NA	-3	True	CATAAA	-21	NA	36484326	36462266	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000189	chr1	-	3797	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	64	2	-39	-2	multi-exon	FALSE	canonical	3	395	junction_2	27.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTTCTGTTTCAAGAT	6336	False	NA	-5	True	NA	NA	NA	37469120	37456166	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_37459709_37467422_37467507_37468949
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000201	chr1	+	1482	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	3	0	3	0	multi-exon	FALSE	canonical	3	65	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCCTTTTCCTTAAGG	NA	False	NA	15	True	ATTAAA	-15	NA	37911289	37915309	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_37911407_37913944
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000218	chr1	+	2494	16	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	36016	3552	-7765	6	3prime_fragment	FALSE	canonical	3	450	junction_1	75.1787795118336	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACAGATTTTGTGATTC	NA	False	NA	43	True	ATTAAA	-30	NA	38073106	38091108	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000320	chr1	-	589	1	Genic_Genomic	ENSMUSG00000025980.15	novel	NA	NA	NA	NA	9603	2	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTTACCCTTTCCA	NA	False	NA	-4	True	AATAAA	-18	NA	55117580	55116991	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_55117000_55117600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000420	chr1	+	828	6	NIC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	1264.85610248755	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTCATTTTGCTGTG	NA	False	NA	34	True	AATAAA	-19	NA	63216299	63218819	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_63216451_63216881_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000421	chr1	+	797	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1303.22400223446	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216299	63218815	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218537_63218616
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000437	chr1	+	2278	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	27	2181	0	9	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTGGCTGATCACTGCA	NA	False	NA	14	True	AATAAA	-25	NA	63769799	63791633	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000512	chr1	+	1432	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	12	-5	-8	5	multi-exon	TRUE	canonical	3	1389	junction_1	306.215936881149	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTTGATTTTTCTCG	7840	False	NA	19	True	AATAAA	-24	NA	74275667	74307373	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000609	chr1	+	3797	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	10	-2	10	2	multi-exon	FALSE	canonical	3	335	junction_1	34.2579826463848	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATGTCCTTTAGACAG	NA	False	NA	17	True	AATAAA	-18	NA	85721171	85779299	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000665	chr1	+	987	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	30	790	5	2	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCATGCTCTTGCTCTT	NA	False	NA	17	True	AATAAA	-17	NA	87141665	87155788	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000880	chr1	-	479	4	NNC	ENSMUSG00000090553.9	novel	503	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2134.95688220837	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCATTCTGGTGGC	NA	False	NA	-9	True	AATAAA	-30	NA	133538018	133531608	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_133531815_133534238_133534318_133536634_133536698_133537887
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000000890	chr1	-	2578	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	14	151	14	-151	multi-exon	FALSE	canonical	3	77	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGTGGAATTCCATAG	NA	False	NA	-1	True	AATAAA	-26	NA	134006844	134003058	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_134005442_134006649
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001051	chr1	+	450	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	109	-2	-2	0	multi-exon	TRUE	canonical	3	3085	junction_7	1053.46856146731	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862745	160866109	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001054	chr1	+	491	12	FSM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	13	-2	-2	0	multi-exon	FALSE	canonical	3	1206	junction_7	1656.43137771865	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862745	160866109	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001071	chr1	+	745	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	-270	0	intron_retention	FALSE	canonical	3	1206	junction_5	1486.6784088558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160863319	160866109	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001072	chr1	+	319	7	ISM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	584	0	-270	0	3prime_fragment	FALSE	canonical	3	131	junction_5	2033.42268246313	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160863319	160866109	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865794_160865843_160866026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001107	chr1	-	1275	4	FSM	ENSMUSG00000026701.16	ENSMUST00000192639.6	1294	4	25	-6	1	6	multi-exon	FALSE	canonical	3	42	junction_3	831.771736849854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGTCATGTTTTAAAGT	NA	False	NA	-5	True	AATAAA	-16	NA	161078731	161068578	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161078591
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001108	chr1	-	1539	6	FSM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	9	-589	5	6	multi-exon	FALSE	canonical	3	50	junction_5	839.164012574419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGTCATGTTTTAAAGT	NA	False	NA	-5	True	AATAAA	-16	NA	161078727	161068578	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161076928_161077040_161078591
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001153	chr1	-	2275	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	10	0	2	0	multi-exon	TRUE	canonical	3	372	junction_2	205.630737002035	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462088	165419808	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001154	chr1	-	2169	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	2	0	2	0	multi-exon	FALSE	canonical	3	343	junction_1	201.827896981562	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462088	165419808	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001162	chr1	+	2138	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	25	0	25	0	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGACTGATTTCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	165591339	165602877	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001166	chr1	+	2323	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	192	0	13	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165957998	165994079	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001199	chr1	-	1172	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	7	1992	-5	250	multi-exon	TRUE	canonical	3	578	junction_5	147.434866975217	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTGGAATCTAGTGACA	463	False	NA	1	True	ATTAAA	-23	NA	170978165	170956725	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001217	chr1	+	639	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3265	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	24.4176620957499	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGTGTCTTTGGGT	NA	False	NA	16	True	AATAAA	-22	NA	171049357	171053947	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_171049548_171052855_171052936_171053234_171053368_171053711
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001225	chr1	-	1594	13	NNC	ENSMUSG00000013593.13	novel	1623	13	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	392.861263326155	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGTAATGTGTCTTT	NA	False	NA	-4	True	ATTAAA	-25	NA	171074669	171062424	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_171062657_171062841_171062900_171063925_171064006_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001234	chr1	-	956	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	53	-2	16	2	multi-exon	FALSE	canonical	3	257	junction_6	130.826539101718	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTCTCATTGATGGC	7336	False	NA	2	True	AATAAA	-20	NA	171122544	171116133	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001251	chr1	+	603	4	NNC	ENSMUSG00000006412.11	novel	1735	4	NA	NA	-18	200	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_3	941.834144398872	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	29	True	NA	NA	NA	171173279	171185738	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_171173355_171184097_171184187_171184272_171184397_171185423
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001262	chr1	-	2784	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	111	6	111	-6	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9107	False	NA	44	True	ATTAAA	-15	NA	171910251	171893585	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001295	chr1	-	1597	10	NNC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	278.865337651007	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTTAAAATTTAATTTA	833	False	NA	-14	True	AATAAA	-39	NA	175453160	175428941	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_175429133_175431503_175431658_175433620_175433749_175435378_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001322	chr1	+	1918	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	30	0	-20	0	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCCCCTTTTTTGGT	NA	False	NA	12	True	AATAAA	-19	NA	179495804	179514754	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001325	chr1	+	3870	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	3	0	3	0	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3150	False	NA	10	True	ATTAAA	-18	NA	180396496	180428819	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001335	chr1	-	1022	4	FSM	ENSMUSG00000060743.13	ENSMUST00000081026.11	888	4	-2	-132	-2	132	multi-exon	TRUE	canonical	1	55	junction_1	1176.16816635869	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180641114	180630129	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_180630768_180637681_180637836_180639363_180639515_180641035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001338	chr1	-	1026	4	NNC	ENSMUSG00000060743.13	novel	2841	4	NA	NA	-8	132	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1245.53629680819	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180641120	180630129	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_180630771_180637681_180637836_180639363_180639510_180641035
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001370	chr1	+	682	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	18	2568	18	45	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGTGTTTTGTCTCCTC	NA	False	NA	48	True	AATAAA	-41	NA	180978513	180993991	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001375	chr1	-	430	1	FSM	ENSMUSG00000081214.4	ENSMUST00000117444.2	333	1	-62	-35	-62	35	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTCTTGTAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	181069947	181069517	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_181069500_181069900
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001691	chr10	+	2114	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	13	0	13	0	multi-exon	FALSE	canonical	3	61	junction_4	6.25316246521123	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	43097494	43316598	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001717	chr10	-	2816	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	64	0	11	0	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	AATAAA	-16	NA	57408562	57391869	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001776	chr10	+	2601	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	12	0	-8	0	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516100	61529076	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001778	chr10	+	2249	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	35	2	35	-2	multi-exon	FALSE	canonical	3	269	junction_1	6.12825877028341	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTGTTGGCTGCTT	NA	False	NA	19	True	AATAAA	-22	NA	61531327	61538550	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001836	chr10	-	1221	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	3	3151	3	27	multi-exon	TRUE	canonical	3	2056	junction_1	102.156542539739	316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGGCTGTTAATTAC	NA	False	NA	-1	True	AATATA	-24	NA	69188765	69174126	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001849	chr10	-	1411	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	20	0	20	0	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	False	NA	0	True	AATAAA	-18	NA	71121072	71090809	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000001975	chr10	-	1907	7	ISM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	9895	0	-426	0	3prime_fragment	FALSE	canonical	3	133	junction_2	34.2673313813609	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79381030	79376078	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002003	chr10	+	1235	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_5	2689.50535229064	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79540351	79547803	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547301
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002080	chr10	+	876	4	NNC	ENSMUSG00000003072.16	novel	1410	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_3	1112.25186995672	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTCTGTTTCTAAC	4491	False	NA	15	True	ATTAAA	-14	NA	79978194	79981647	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79978441_79979665_79979820_79981052_79981142_79981260
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002088	chr10	+	642	3	FSM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	10	26	10	-26	multi-exon	FALSE	canonical	3	33	junction_1	13	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGACCTCCCCCTTGAT	NA	False	NA	17	True	AATAAA	-23	NA	80008787	80010954	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80009009_80010042_80010160_80010650
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002102	chr10	+	729	7	NNC	ENSMUSG00000020153.15	novel	722	8	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	829.040090841343	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTCTGTGTGGACT	9710	False	NA	25	True	AATAAA	-16	NA	80085303	80092628	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80085326_80088883_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002115	chr10	+	772	3	FSM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	-173	-27	19	0	multi-exon	FALSE	canonical	3	7729	junction_2	373	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6361	False	NA	30	True	AATAAA	-21	NA	80128305	80129948	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80128695_80129475_80129711_80129800
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002117	chr10	+	597	4	NNC	ENSMUSG00000063457.15	novel	572	3	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	409	junction_1	3639.28063709788	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6379	False	NA	30	True	AATAAA	-21	NA	80128323	80129948	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80128452_80128608_80128695_80129475_80129711_80129800
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002122	chr10	+	466	3	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	129	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	4218.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6663	False	NA	30	True	AATAAA	-21	NA	80128607	80129948	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80128695_80129475_80129711_80129804
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002123	chr10	+	458	3	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	129	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_2	4232	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6663	False	NA	30	True	AATAAA	-21	NA	80128607	80129948	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80128695_80129475_80129699_80129800
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002222	chr10	+	1273	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	11	0	11	0	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	259	False	NA	5	True	AATAAA	-14	NA	80765917	80768038	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002246	chr10	+	3066	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	27	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	1960.19076175897	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2208	False	NA	32	True	AATAAA	-20	NA	81012491	81018332	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015635_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002250	chr10	+	3071	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	27	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1962.07709949907	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCTGTTTTGTACAGC	2208	False	NA	39	True	AATAAA	-27	NA	81012491	81018339	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016248_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002251	chr10	+	3055	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1963.88304524089	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2208	False	NA	32	True	AATAAA	-20	NA	81012491	81018332	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_81012564_81013498_81013714_81013886_81014062_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002263	chr10	+	3007	13	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	1017	0	1017	0	3prime_fragment	FALSE	canonical	3	5618	junction_9	705.177573184388	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	3198	False	NA	32	True	AATAAA	-20	NA	81013481	81018332	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002290	chr10	+	1436	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	8	0	8	0	multi-exon	FALSE	canonical	3	742	junction_3	32.2286751201473	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	False	NA	15	True	AATAAA	-19	NA	81220269	81224186	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002294	chr10	-	2863	14	FSM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	49	206	-1	2	multi-exon	TRUE	canonical	3	251	junction_4	53.9264236863306	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCAGGTGTCCTGAGGA	NA	False	NA	-28	True	AATAAA	-20	NA	81332177	81322288	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002388	chr10	+	5904	14	FSM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	40	8	40	-8	multi-exon	FALSE	canonical	3	23	junction_13	8.52632540148867	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTATGTGTGTTAG	NA	False	NA	4	True	AATAAA	-14	NA	86614908	86674245	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002403	chr10	+	1032	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	108	-1	13	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295538	88309098	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002488	chr10	-	2197	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	11	14	11	-14	multi-exon	FALSE	canonical	3	447	junction_2	23.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGCACTCATTACTTT	NA	False	NA	-12	True	AATAAA	-18	NA	95252708	95247365	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_95248973_95250692_95251054_95252479
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002512	chr10	+	1809	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	10	3182	10	959	multi-exon	FALSE	canonical	3	461	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCTCTTGTCATGATTA	NA	False	NA	NA	False	AATAAA	-25	NA	96452877	96455489	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_96453335_96454137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002522	chr10	+	983	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	423	407	-14	-407	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCTCACAGTGAGATA	NA	False	NA	10	True	AATATA	-16	NA	105677350	105683287	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002543	chr10	+	1456	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	635.455597446848	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309097	111332745	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329308_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002554	chr10	+	2123	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_6	608.279142586792	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309098	111332745	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326323_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002560	chr10	+	1464	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	635.455597446848	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309099	111332745	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002600	chr10	-	1930	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-14	4	at_least_one_novel_splicesite	FALSE	canonical	1	39	junction_10	607.165765394152	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTACTGATCTGTATAT	NA	False	NA	-7	True	AATAAA	-23	NA	116899682	116886901	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897198_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002700	chr10	-	1530	6	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	246.449183402989	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGTCTTGTCTTGT	NA	False	NA	-9	True	AATAAA	-6	NA	126906121	126903157	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_126904060_126904137_126904252_126904353_126904481_126904776_126904858_126905214_126905383_126905983
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002733	chr10	-	2285	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	21	-17	21	1	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	-4	True	AATGAA	-16	NA	127358292	127352990	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002770	chr10	+	780	7	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	854	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4174.08647357585	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGGTGCTAGATCTT	5826	False	NA	0	True	AATAAA	-24	NA	127872357	127884502	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_127872430_127882036_127882127_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002790	chr10	+	1912	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	4	0	4	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	3407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGGGCCTTGTGTTTC	NA	False	NA	11	True	ATTAAA	-22	NA	127919145	127926260	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002809	chr10	+	467	2	ISM	ENSMUSG00000025393.13	ENSMUST00000126751.2	478	3	395	0	-94	0	3prime_fragment	FALSE	canonical	3	11272	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127924815	127926142	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127925028_127925887
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002812	chr10	+	257	1	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	976	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127925885	127926142	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_127925900_127926100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002852	chr10	-	972	6	ISM	ENSMUSG00000039824.5	ENSMUST00000026428.4	1026	7	1266	-2	1266	2	3prime_fragment	FALSE	canonical	0	0	junction_1	1.72046505340853	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTTTCCGACAGTTTTCT	4680	False	NA	-8	True	AATAAA	-16	NA	128333288	128330023	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128330353_128330458_128330537_128330922_128331097_128332121_128332266_128332482_128332511_128333069
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002880	chr10	-	2504	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-17	-4	-17	2	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTTCTCTTTGTG	-4	True	NA	-3	True	AATAAA	-16	NA	128401873	128393632	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002894	chr10	-	415	3	NNC	ENSMUSG00000025362.7	novel	596	3	NA	NA	183	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10701.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462110	128460404	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128460506_128461071_128461207_128461931
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002923	chr10	-	1069	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-9	513	3	67	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	2	True	TATAAA	-19	NA	128657472	128654283	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000002948	chr11	-	1544	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-12	14	10	-14	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTATTCATG	NA	False	NA	-15	True	TATAAA	-20	NA	3216405	3199920	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003013	chr11	+	2230	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	7	-2	7	0	multi-exon	TRUE	canonical	3	228	junction_1	27.0805712775824	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTAGCTCCTTGG	NA	False	NA	23	True	ATTAAA	-20	NA	4845349	4878867	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003080	chr11	+	740	5	FSM	ENSMUSG00000071866.13	ENSMUST00000090749.13	746	5	8	-2	2	0	multi-exon	FALSE	canonical	3	147	junction_1	16065.018555467	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365877	6369817	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_6365985_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003163	chr11	+	2844	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-16	-1	-16	1	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGCTTGTTGGGTCTATT	NA	False	NA	NA	False	AATAAA	-25	NA	20151415	20176857	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003231	chr11	-	909	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	9	0	7	0	multi-exon	FALSE	canonical	3	382	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTGTCTTTAATTTG	NA	False	NA	-1	True	AATAAA	-23	NA	29465024	29462875	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_29463677_29464916
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003248	chr11	-	940	4	ISM	ENSMUSG00000020460.16	ENSMUST00000150739.2	928	5	136	-53	114	0	3prime_fragment	FALSE	canonical	3	7984	junction_3	3511.54859792023	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497746	29495845	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_29496030_29496290_29496423_29496702_29497261_29497680
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003319	chr11	-	1272	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6182.80601021898	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113064	33102509	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_33102853_33103985_33104061_33105998_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003380	chr11	+	1608	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	-29	-2	-29	2	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTTTTCTTTTCTTC	NA	False	NA	31	True	AATAAA	-23	NA	40624464	40630875	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003454	chr11	+	3857	3	ISM	ENSMUSG00000046311.14	ENSMUST00000136539.2	2992	4	8376	-1022	7	-24	3prime_fragment	FALSE	canonical	3	110	junction_2	5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	4732	False	NA	7	True	AATAAA	-16	NA	49103521	49109612	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49103604_49104416_49104470_49105890
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003476	chr11	+	2419	15	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	14	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	54.6045617441007	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116175	50125930	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122156_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003491	chr11	+	2114	13	NIC	ENSMUSG00000007850.17	novel	2427	15	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	42	junction_10	135.177326953237	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50269115	50277355	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003544	chr11	-	2365	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-24	26	-24	-26	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTCTCTGGTCTTATG	NA	False	NA	-26	True	AATATA	-6	NA	51541693	51533915	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003579	chr11	+	1796	9	NNC	ENSMUSG00000020402.12	novel	2022	9	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1093.25545247897	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5361	False	NA	30	True	AATAAA	-26	NA	52251916	52280224	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278305_52279258
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003744	chr11	+	1900	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	20	0	20	0	multi-exon	FALSE	canonical	3	425	junction_1	0	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGGTTTGCCTGTTGGC	NA	False	NA	10	True	ATTAAA	-21	NA	59839051	59853031	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_59839305_59851384
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003821	chr11	-	1147	2	Antisense	novelGene_ENSMUSG00000019505.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGTCACTGAGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	62444039	62442340	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_62442400_62442951
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003832	chr11	+	1076	1	NIC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62442963	62444039	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_62443000_62444000
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003925	chr11	+	383	2	FSM	ENSMUSG00000059278.10	ENSMUST00000124932.2	404	2	21	0	21	0	multi-exon	FALSE	canonical	3	1280	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69286964	69287506	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_69287187_69287345
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000003970	chr11	-	1757	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	1	255	junction_5	4159.69003773118	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563131	69557762	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559371_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004126	chr11	+	753	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	7	221	7	-221	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTAACACGTGGCTAT	NA	False	NA	23	True	AATAAA	-23	NA	72098379	72100620	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004167	chr11	-	1526	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	283	1374	-5	-1354	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAGCCCACAGTCTCCG	NA	False	NA	NA	False	AATAAA	-23	NA	74816491	74798998	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004176	chr11	-	2876	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	19	2182	5	2	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTGACTGTAAAGGA	NA	False	NA	-14	True	AATAAA	-23	NA	75239131	75191173	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004217	chr11	-	3439	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	101	0	-46	0	multi-exon	FALSE	canonical	3	437	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	-1	True	AATAAA	-22	NA	76108389	76101396	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_76104750_76108303
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004259	chr11	-	1990	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	24	0	24	0	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	77971185	77964201	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004380	chr11	-	1739	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	44	0	-25	0	multi-exon	TRUE	canonical	3	193	junction_4	34.6180548590215	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8347	False	NA	-6	True	AATAAA	-22	NA	82799193	82791593	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004424	chr11	+	2781	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	-3	1645	-3	-1645	multi-exon	FALSE	canonical	3	24	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTCTCTGTTTCTGTG	NA	False	NA	9	True	NA	NA	NA	86092192	86100373	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_86092379_86097778
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004490	chr11	+	1096	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-2699	-17540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	476.051117703411	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	6732	False	NA	NA	False	NA	NA	NA	88858378	88864240	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_88858476_88861243_88861306_88861723_88861820_88863399
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004631	chr11	-	512	4	NNC	ENSMUSG00000006057.16	novel	4660	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_2	4667.21625335227	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	4114	False	NA	-5	True	NA	NA	NA	95965861	95963811	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_95964045_95964348_95964501_95964787_95964866_95965812
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004638	chr11	-	1551	5	ISM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	4359	43	4357	-43	3prime_fragment	FALSE	canonical	3	408	junction_2	31.4722099637124	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGCTGTGTTGATT	8570	False	NA	-5	True	NA	NA	NA	95998431	95990194	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004672	chr11	-	1400	3	NNC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	45	-6518	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	150.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAACAGCAAGAATGAG	NA	False	NA	-11	True	AATAAA	-21	NA	96868492	96851562	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_96852836_96854186_96854268_96868446
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004716	chr11	+	765	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	9	-8	9	8	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGCCTTTGTTTCTGC	NA	False	NA	30	True	AATAAA	-23	NA	97594233	97604334	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004726	chr11	-	454	5	NNC	ENSMUSG00000071415.7	novel	1059	5	NA	NA	-8	5	at_least_one_novel_splicesite	FALSE	canonical	3	613	junction_3	5440.57875482931	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCTTCTTGACACCTT	NA	False	NA	-30	True	ATTAAA	-16	NA	97673196	97668858	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_97668991_97669090_97669205_97672159_97672257_97672631_97672716_97673169
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004797	chr11	+	766	3	NIC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	113	2	intron_retention	FALSE	canonical	3	11207	junction_1	780.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAGTCTTGAAGTCC	4070	False	NA	1	True	AATAAA	-15	NA	100210823	100212361	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_100210987_100211491_100211876_100212142
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004822	chr11	-	1350	8	NNC	ENSMUSG00000017176.18	novel	1348	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	187.994246546786	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331755	100320179	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_100320776_100321902_100322104_100323743_100323903_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000004894	chr11	-	1287	12	NNC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	170.726449799546	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	-21	True	AGTAAA	-16	NA	101308215	101297664	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_101297851_101298956_101299049_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005002	chr11	-	3722	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	44	0	12	0	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844838	103712607	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005041	chr11	+	1317	11	NNC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	791.586154502465	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCCAGTTTGTTAATAC	4544	False	NA	20	True	AATAAA	-24	NA	106146987	106153951	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153333_106153406_106153518_106153622_106153710_106153834
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005055	chr11	-	3510	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	49	0	5	0	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9665	False	NA	-8	True	AATAAA	-18	NA	106679309	106671180	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005116	chr11	+	339	5	FSM	ENSMUSG00000057322.13	ENSMUST00000082092.5	345	5	6	0	6	0	multi-exon	FALSE	canonical	3	1304	junction_1	7543.63564122102	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559457	114563157	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_114559512_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005125	chr11	+	1915	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	12	-2	12	2	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTGTCCTCCTTTGT	NA	False	NA	12	True	NA	NA	NA	115054178	115072009	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005131	chr11	+	843	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	1	1752	1	3	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCAGTGAGAGCTTTG	NA	False	NA	19	True	AATAAA	-19	NA	115294578	115301748	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005142	chr11	-	549	5	NNC	ENSMUSG00000034566.11	novel	486	5	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1444.2389648185	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115309344	115306516	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308753_115309207
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005147	chr11	-	652	6	ISM	ENSMUSG00000034566.11	ENSMUST00000106537.8	682	7	622	6	-222	-6	3prime_fragment	FALSE	canonical	3	116	junction_5	1261.27275400684	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTATCGTCTCTGAGTAG	NA	False	NA	-9	True	AATAAA	-16	NA	115310121	115306520	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310017
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005191	chr11	-	1342	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	30	0	-12	0	multi-exon	FALSE	canonical	3	302	junction_2	38.1030182531515	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503765	115498743	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005225	chr11	-	1788	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	39	-1	16	1	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGACTCTTGTGTGG	NA	False	NA	-10	True	AGTAAA	-17	NA	115977782	115969397	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005235	chr11	+	881	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	21	0	21	0	multi-exon	FALSE	canonical	3	95	junction_3	16.0277537068951	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	9088	False	NA	7	True	AATAAA	-14	NA	116089701	116106144	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005276	chr11	-	1886	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	11	2	11	1	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTCCTGGTCTTTTGT	6014	False	NA	-7	True	ATTAAA	-29	NA	116743909	116740728	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_116741788_116742846_116743158_116743393
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005290	chr11	+	181	1	FSM	ENSMUSG00002076896.1	ENSMUST00020182044.1	193	1	13	-1	13	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGAAGCTGTGGGGA	1348	False	NA	26	True	NA	NA	NA	116968081	116968262	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_116968100_116968300
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005294	chr11	+	2796	9	ISM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	19083	11	-1752	0	3prime_fragment	FALSE	canonical	3	610	junction_8	24.1062102994228	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	577	False	NA	91	True	AATAAA	-16	NA	117242253	117253139	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005336	chr11	-	2609	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-12	2582	-12	1218	multi-exon	FALSE	canonical	3	62	junction_3	7	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTCCGAGATTAGCT	NA	False	NA	0	True	ATTAAA	-21	NA	118977059	118970980	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005346	chr11	+	1346	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	67	3657	-12	15	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATGGGTCACTCTTAC	6321	False	NA	NA	False	AATACA	-23	NA	119382239	119398592	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005597	chr12	+	2009	12	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	489.496469229789	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCATCAGGGAATGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	17594984	17601080	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598791_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005598	chr12	+	2018	12	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	491.796773185533	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGAATGTTTGCAAGTA	NA	False	NA	NA	False	AATAAA	-22	NA	17594984	17601087	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_17595170_17597096_17597193_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005608	chr12	+	1563	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	-39	2	-39	-2	multi-exon	FALSE	canonical	3	71	junction_1	8.52447456836295	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGTGAGTTTCCTGT	8585	False	NA	15	True	AATAAA	-3	NA	17740817	17841932	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005659	chr12	+	2142	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	13	38	13	-38	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGTATTAAATGATTTA	NA	False	NA	34	True	AATAAA	-34	NA	24758252	24764107	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005680	chr12	-	701	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	22	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	5471.28825222076	73	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685930	28681081	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683830_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005687	chr12	+	1423	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	34	-2	12	2	multi-exon	TRUE	canonical	3	155	junction_3	35.1318217284442	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTAGTTTGAGTTACT	NA	False	NA	15	True	AATAAA	-23	NA	28699634	28709590	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005743	chr12	-	1974	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-40	-2	-29	2	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGTGTTTAAATCAAAG	NA	False	NA	-2	True	AATAAA	-22	NA	36092528	36064553	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005747	chr12	-	1858	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	17	-4	17	4	multi-exon	FALSE	canonical	3	931	junction_9	81.950499068161	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCAGAGCGTGTTTTA	NA	False	NA	-7	True	AATAAA	-25	NA	36206807	36141829	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005753	chr12	-	1116	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	64	2530	2	1	multi-exon	FALSE	canonical	3	67	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTAGTGTTTTGTGCTT	NA	False	NA	-6	True	AATAAA	-16	NA	40087364	40085819	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_40086833_40087261
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005794	chr12	-	1050	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	16	3120	-3	6	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGTTATCAACCTCTAT	NA	False	NA	1	True	ATTAAA	-25	NA	54742650	54720244	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005837	chr12	-	1520	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	60	-2	60	2	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCCCGCTCGTTTGCTA	NA	False	NA	0	True	ATTAAA	-19	NA	55539372	55536192	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005880	chr12	+	862	4	NNC	ENSMUSG00000055884.9	novel	1682	7	NA	NA	8	-6654	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	59.9462722406953	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGATTAAAAAGCAAAAGGA	9292	False	NA	NA	False	NA	NA	NA	65122388	65134204	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134156
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005961	chr12	+	1801	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	91	-600	91	0	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132721	72148235	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000005964	chr12	-	1511	7	FSM	ENSMUSG00000021087.19	ENSMUST00000021497.16	1544	7	34	-1	-4	0	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTCTCTCTGTCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	72283464	72258525	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006050	chr12	+	1522	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	5	0	5	0	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992282	80997281	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006117	chr12	-	1315	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	148	1836	-90	94	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTTCAGTCTGTGG	NA	False	NA	-1	True	CATAAA	-20	NA	84819778	84803171	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006143	chr12	-	629	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	19	0	2	0	multi-exon	FALSE	canonical	3	386	junction_2	28.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCTTCCCCCCCTCCCT	4310	False	NA	0	True	AATAAA	-24	NA	85327190	85319171	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_85319602_85326764_85326857_85327083
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006195	chr12	-	1937	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	12	1908	-1	0	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490597	87474846	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006272	chr12	-	2874	9	FSM	ENSMUSG00000041645.15_ENSMUSG00000055271.6	ENSMUST00000044923.15	2850	9	-17	-7	-6	7	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTTGCAGTGTTTTATC	NA	False	NA	-5	True	ATTAAA	-27	NA	103392095	103374233	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006278	chr12	+	1792	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9682	2	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCTCAGCTTGCAGTC	672	False	NA	20	True	AATACA	-29	NA	104343740	104360518	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006289	chr12	-	1423	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	-25	0	-25	0	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCTCTTGGAATTATG	NA	False	NA	-2	True	AATAAA	-23	NA	105189021	105183008	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006322	chr12	+	2183	14	FSM	ENSMUSG00000021262.16	ENSMUST00000021689.14	2180	14	-3	0	1	0	multi-exon	FALSE	canonical	3	149	junction_6	17.7207129833721	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	NA	False	NA	17	True	AATAAA	-17	NA	108520979	108654775	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006346	chr12	+	1908	8	FSM	ENSMUSG00000097451.12	ENSMUST00000238384.2	2352	8	444	0	15	0	multi-exon	FALSE	canonical	3	549	junction_5	36.3862499259469	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1345	False	NA	NA	False	ACTAAA	-5	NA	109617116	109628150	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006377	chr12	-	2754	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4153.52792815939	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662731	110657461	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660772_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006378	chr12	-	2764	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4157.17972187876	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662731	110657461	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660140_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006380	chr12	-	2770	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4138.75546632076	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662734	110657461	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659738_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006439	chr12	-	1500	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	7551	junction_5	335.592345297419	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638723	111635794	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111638014_111638199_111638408_111638663
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006440	chr12	-	1668	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	7551	junction_4	349.982056682911	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638721	111635794	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111638014_111638199_111638408_111638663
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006465	chr12	+	307	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAGAAATGATAAACATT	7447	False	NA	NA	False	NA	NA	NA	111927808	111929790	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_111927992_111929666
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006467	chr12	+	309	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAAATGATAAACAT	7447	False	NA	NA	False	NA	NA	NA	111927808	111929789	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_111927995_111929666
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006469	chr12	+	319	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAAATGATAAACAT	7447	False	NA	NA	False	NA	NA	NA	111927808	111929789	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_111928005_111929666
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006472	chr12	+	322	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAAATGATAAACAT	7447	False	NA	NA	False	NA	NA	NA	111927808	111929789	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_111928008_111929666
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006652	chr13	-	1531	8	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	174.090991924877	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8490	False	NA	-7	True	AATAAA	-19	NA	34119948	34101909	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119551_34119778_34119904
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006692	chr13	-	1045	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	-22	1063	-22	-1063	multi-exon	FALSE	canonical	3	325	junction_1	9.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATTTATTTCCTGACA	NA	False	NA	NA	False	AATAAA	-15	NA	36301531	36163440	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_36163891_36276788_36276910_36301057
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006828	chr13	-	2563	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	43	0	-6	0	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTGTTTGGATAGCAG	1872	False	NA	-18	True	AATAAA	-27	NA	53531390	53486783	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006831	chr13	+	2798	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	-11	-4	-11	4	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225876	54262365	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006893	chr13	-	2060	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	139	0	2	0	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684332	55678228	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006921	chr13	-	1931	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGTGTTTTGTGTTAC	6017	False	NA	-5	True	AGTAAA	-18	NA	56283332	56221431	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000006988	chr13	+	2338	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-1425	-5	1355	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATCCATGTAAA	NA	False	NA	8	True	AATAAA	-20	NA	62245556	62261216	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007026	chr13	-	1382	8	NNC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	11	-582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	463.663275074769	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518109	64511609	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516837_64516979_64518049
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007035	chr13	-	503	3	NNC	ENSMUSG00000113955.2	novel	364	2	NA	NA	-6972	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	204	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTTCCATTATTTC	NA	False	NA	NA	False	NA	NA	NA	65651579	65639599	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_65639775_65644415_65644605_65651440
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007058	chr13	-	2707	4	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7306	967	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1888	False	NA	-1	True	NA	NA	NA	66439271	66427982	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007067	chr13	-	581	4	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-2	172	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	71.3411210702184	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589181	66577778	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_66578071_66581478_66581540_66581739_66581867_66589080
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007086	chr13	-	2630	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	-2166	0	884	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	1	True	NA	NA	NA	66950624	66939249	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007289	chr13	-	885	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	7	-4	-3	3	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	2489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATCATTTTACTTATTT	NA	False	NA	-13	True	AATAAA	-40	NA	98453507	98446400	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007314	chr13	+	1223	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	8	-9	2	9	multi-exon	TRUE	canonical	3	544	junction_6	97.8154352594722	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAGATATTTTCCTTT	NA	False	NA	26	True	AATAAA	-22	NA	100261367	100274207	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007435	chr13	-	665	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	184	849	6	4	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGCAGTTTCTATTTT	NA	False	NA	-14	True	AATAAA	-23	NA	114524610	114425179	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007445	chr13	+	1173	7	FSM	ENSMUSG00000015536.15	ENSMUST00000015680.11	1152	7	-15	-6	-1	0	multi-exon	TRUE	canonical	3	133	junction_2	16.9844700306551	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	114954797	114965265	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007457	chr13	-	2276	10	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	34176	-1	34176	1	3prime_fragment	FALSE	canonical	3	169	junction_9	19.0496427496394	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCTTCGTCTCTGATGA	NA	False	NA	NA	False	AATAAA	-18	NA	119511312	119472062	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007479	chr14	+	1910	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	12	0	12	0	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	4198640	4201873	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007492	chr14	+	825	4	NNC	ENSMUSG00000012405.17	novel	883	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4532.06975037038	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198721	4200736	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_4198874_4199235_4199418_4199652_4199790_4200382
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007498	chr14	+	673	3	NNC	ENSMUSG00000012405.17	novel	883	4	NA	NA	164	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5163.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4199233	4200736	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_4199418_4199652_4199790_4200384
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007512	chr14	+	1282	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-345	0	230	0	multi-exon	TRUE	canonical	3	370	junction_1	118.776758531907	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	22	True	AATAAA	-16	NA	8508140	8520751	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007521	chr14	+	921	8	ISM	ENSMUSG00000053453.10	ENSMUST00000225401.2	951	9	3583	0	-1	0	3prime_fragment	FALSE	canonical	3	34	junction_1	232.827167220491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8512130	8520749	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_8512210_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007546	chr14	+	4845	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	31	0	12	0	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801363	19861855	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007731	chr14	-	1850	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	97	0	-11	0	multi-exon	TRUE	canonical	3	775	junction_10	82.9678140200482	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741012	30734389	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007762	chr14	-	534	2	FSM	ENSMUSG00000021905.15	ENSMUST00000124303.9	809	2	161	114	41	0	multi-exon	FALSE	canonical	3	69	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTGTCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	31807525	31804828	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_31805204_31807366
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007872	chr14	+	1801	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	93	0	8	0	multi-exon	FALSE	canonical	3	692	junction_5	52.2695577431708	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045390	51058758	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000007952	chr14	+	3163	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	453	1889	-18	-1889	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTTAAATGTGCATTC	NA	False	NA	8	True	AGTAAA	-20	NA	52517055	52531969	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008035	chr14	+	1010	11	FSM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	104	-2	-4	1	multi-exon	FALSE	canonical	1	117	junction_4	54.1775783881118	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTTTATTGTATGTG	NA	False	NA	16	True	AATAAA	-20	NA	55815920	55818987	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008052	chr14	-	679	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	65	989	8	890	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGTTTCCATTTTTCT	2350	False	NA	-13	True	ATTAAA	-37	NA	55897900	55896324	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008083	chr14	-	1188	5	FSM	ENSMUSG00000022223.10	ENSMUST00000227139.2	867	5	306	-627	-9	0	multi-exon	FALSE	canonical	3	161	junction_3	15.0499169432924	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	-6	True	AATAAA	-20	NA	56137379	56134739	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008114	chr14	+	514	2	NNC	ENSMUSG00000021967.5	novel	2877	2	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTCTCATACGGAATA	NA	False	NA	27	True	ATTAAA	-19	NA	58063704	58064407	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_58063780_58063968
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008119	chr14	+	444	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	77	-2	77	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTCTCATACGGAATA	NA	False	NA	27	True	ATTAAA	-19	NA	58063963	58064407	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_58064000_58064400
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008252	chr14	-	985	2	ISM	ENSMUSG00000033712.7	ENSMUST00000227589.2	2595	3	1720	6	1720	-2	3prime_fragment	FALSE	canonical	3	172	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGTGTGAGTCTTTGT	NA	False	NA	42	True	AATAAA	-16	NA	70376825	70375618	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70376397_70376618
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008297	chr14	+	775	6	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2181.31156875858	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGAACTCTTTGCTGTG	1091	False	NA	5	True	AATAAA	-16	NA	76082785	76085738	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_76082897_76083056_76083131_76083642_76083810_76084133_76084240_76084683_76084801_76085538
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008315	chr14	+	1720	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	44	-2	-8	2	multi-exon	FALSE	canonical	3	2255	junction_1	40	490	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTTCTATATGACGCCA	6583	False	NA	33	True	AATAAA	-23	NA	76741961	76745207	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_76742282_76742688_76742738_76743856
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008495	chr15	-	675	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	19	66	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_4	3424.13773817585	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	874	False	NA	79	True	AATAAA	-22	NA	11996079	11984060	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996032
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008513	chr15	-	5173	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	9808	False	NA	NA	False	NA	NA	NA	22705082	22699816	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_-_22704588_22704680
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008521	chr15	-	5172	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	9808	False	NA	NA	False	NA	NA	NA	22705082	22699819	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_-_22704579_22704669
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008581	chr15	+	462	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	31	-4	8	1	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTCAATGTCTTG	140	False	NA	NA	False	ATTAAA	-16	NA	36174186	36177157	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008588	chr15	-	2481	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	28	0	-3	0	multi-exon	FALSE	canonical	3	250	junction_4	35.6195171219375	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	36496938	36477813	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008602	chr15	-	2804	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1580.90175926557	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	389	False	NA	-6	True	AATAAA	-17	NA	36609205	36595903	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605687_36605802_36605987_36606182_36608557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008603	chr15	-	2809	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1575.23443671482	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	390	False	NA	-6	True	AATAAA	-17	NA	36609204	36595903	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597696_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008606	chr15	-	2799	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	1	82	junction_7	1551.04099506343	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	390	False	NA	-6	True	AATAAA	-17	NA	36609204	36595903	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599281_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008640	chr15	+	2040	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	29	2	-14	1	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGCTAGTCATTTATT	213	False	NA	29	True	AATAAA	-15	NA	38662205	38692688	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008726	chr15	+	928	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	-47	126	-13	-126	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTTTCTGTTACCCT	NA	False	NA	24	True	AATAAA	-37	NA	52575790	52593834	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008740	chr15	-	640	5	ISM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	1904	0	1830	0	3prime_fragment	FALSE	canonical	3	91	junction_4	400.30699157022	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55418841	55397489	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55418715
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008841	chr15	-	924	4	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTAATCTGGCCTAT	NA	False	NA	0	True	NA	NA	NA	75754352	75741421	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008861	chr15	-	894	7	NNC	ENSMUSG00000055762.17	novel	1724	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	1447.16501593057	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781143	75767336	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781095
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008961	chr15	-	1705	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	56	-396	56	396	multi-exon	FALSE	canonical	3	304	junction_2	19.5	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTCTGGTATTGGGG	NA	False	NA	-4	True	AGTAAA	-20	NA	76554092	76552028	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_76553341_76553428_76553534_76553804
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008969	chr15	+	2680	4	ISM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	1427	-6	1401	0	3prime_fragment	FALSE	canonical	3	76	junction_3	12.3558353285671	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	76764935	76776595	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76764983_76765311_76765439_76772430_76772548_76774206
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008987	chr15	+	817	5	NNC	ENSMUSG00000003970.10	novel	1020	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4807.96414166121	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788498	76790514	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76788645_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000008994	chr15	+	826	5	NNC	ENSMUSG00000003970.10	novel	1020	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4801.21013391416	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788499	76790514	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055_76790176_76790320
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009040	chr15	+	1338	3	FSM	ENSMUSG00000071711.13	ENSMUST00000169133.8	1309	3	-16	-13	10	2	multi-exon	FALSE	canonical	0	0	junction_1	8	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTGTGAGAATGTC	NA	False	NA	NA	False	AATAAA	-19	NA	78290984	78298215	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_78291064_78294242_78294865_78297578
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009065	chr15	+	1282	6	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	182.547528057764	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	78819417	78825065	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_78819895_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009069	chr15	+	1492	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	-11	889	-11	-889	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTCTGCTTTATTCTG	621	False	NA	16	True	NA	NA	NA	78915062	78921664	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009089	chr15	+	548	5	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	882.240613438307	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCGTTACCTGCGTGC	NA	False	NA	26	True	AATAAA	-20	NA	79025547	79035972	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_79025635_79028793_79028868_79030252_79030384_79035535_79035608_79035788
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009116	chr15	-	4532	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	194	0	8	0	multi-exon	FALSE	canonical	3	55	junction_12	13.0064086767511	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	-40	True	AATAAA	-15	NA	79430748	79411936	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009124	chr15	+	1028	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	14	527	-6	193	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTGTTTGTGGTAGTA	8192	False	NA	27	True	ATTAAA	-23	NA	79555075	79557074	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009135	chr15	-	1434	4	ISM	ENSMUSG00000022420.17	ENSMUST00000162713.9	1357	7	11115	-684	-976	0	3prime_fragment	FALSE	canonical	3	63	junction_3	39.4743235815666	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	8853	False	NA	NA	False	ATTAAA	-17	NA	79650058	79645653	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79646727_79647710_79647795_79649016_79649223_79649987
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009152	chr15	-	1289	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9792.74470030911	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3583	False	NA	-2	True	AATAAA	-16	NA	79967542	79961992	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962903_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009239	chr15	-	1252	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	50	-2	-11	2	multi-exon	FALSE	canonical	3	940	junction_3	83.919543587405	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTTGCTCTGTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	81845081	81835306	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009291	chr15	+	610	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	72	23	12	8	multi-exon	FALSE	canonical	3	1353	junction_2	125	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTCCCCATTTCTCACT	NA	False	NA	38	True	AATAAA	-20	NA	82230226	82233268	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_82230471_82232100_82232242_82233043
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009374	chr15	-	940	4	FSM	ENSMUSG00000064284.13	ENSMUST00000125947.8	706	4	41	-275	41	0	multi-exon	FALSE	canonical	3	301	junction_1	22.0151463012778	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8733	False	NA	0	True	ATTAAA	-15	NA	85695250	85691172	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009405	chr15	+	2038	20	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	0	25	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	237.547405970056	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGACAGACTATTTAAATG	NA	False	NA	23	True	AATAAA	-23	NA	89239965	89255791	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254516_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009457	chr15	+	2239	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	15488	2	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCCAAAAGTGGTTCTG	NA	False	NA	16	True	AATAAA	-17	NA	97274585	97283563	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_97275170_97281908
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009472	chr15	-	2072	3	ISM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	2844	-1077	2844	0	3prime_fragment	FALSE	canonical	3	103	junction_2	11	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98040696	98032517	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98034320_98039164_98039270_98040531
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009484	chr15	-	710	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	28	-4	-18	0	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTATTTTTCACTCGGT	NA	False	NA	NA	False	AATAAA	-19	NA	98626051	98622246	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009534	chr15	-	2889	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	45	-1	1	0	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549492	99518376	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009563	chr15	-	1153	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	-18	0	-9	0	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTTGTTCTGCTTAA	NA	False	NA	16	True	ATTAAA	-37	NA	100534754	100519219	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009602	chr15	+	1185	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	11	284	0	4	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCCCTGATCCACCAA	5938	False	NA	20	True	AATAAA	-21	NA	102240154	102246290	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009645	chr15	+	1753	15	NNC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	165.807747658767	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTTGTGAATAGAAA	2022	False	NA	15	True	ATTAAA	-15	NA	102378986	102407326	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387187_102391601_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009679	chr15	-	679	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	57	-5	57	5	multi-exon	FALSE	canonical	3	3206	junction_4	667.870870752723	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCTCCTGTGTATAT	3958	False	NA	-6	True	AATAAA	-22	NA	102579505	102571293	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009706	chr15	+	1751	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	-10	7	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_2	3995.90984710276	119	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACTGTATGGATTTGG	NA	False	NA	6	True	AATAAA	-24	NA	103148870	103153389	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_103148956_103149506_103149621_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009793	chr16	+	2586	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	62	0	17	0	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501995	4525559	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009809	chr16	+	1271	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	356	-9	5	-4	multi-exon	FALSE	canonical	3	527	junction_2	18	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGCCATGGCCACAT	100	False	NA	21	True	AATAAA	-27	NA	4756980	4758892	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_4757158_4757241_4757503_4758059
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009906	chr16	+	2254	9	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	99.5386231570439	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981170	14010792	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008101_14009586
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000009933	chr16	-	706	4	FSM	ENSMUSG00000022671.14	ENSMUST00000117136.2	758	4	60	-8	1	-1	multi-exon	FALSE	canonical	3	85	junction_3	237.265439727089	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGTGGAGTCCTGGTT	NA	False	NA	-3	True	ATTAAA	-21	NA	15681173	15666305	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_15666594_15680261_15680408_15680611_15680797_15681086
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010153	chr16	+	1745	10	FSM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	13	189	0	0	multi-exon	FALSE	canonical	3	563	junction_3	486.088189935799	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6062	False	NA	NA	False	AATAAA	-18	NA	22926516	22932697	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010156	chr16	+	1884	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	324	0	1	0	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6063	False	NA	NA	False	AATAAA	-18	NA	22926517	22932697	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010162	chr16	+	1885	11	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	441	junction_1	507.107927368524	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6065	False	NA	NA	False	AATAAA	-18	NA	22926519	22932697	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010164	chr16	+	1882	11	NNC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	695.13483584122	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6065	False	NA	NA	False	AATAAA	-18	NA	22926519	22932697	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929878_22930014_22930252_22930343_22930566_22930647_22931916
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010233	chr16	+	4819	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	71	0	8	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCGGACTCATTTCATA	8028	False	NA	18	True	AATAAA	-19	NA	32427808	32451612	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010291	chr16	-	700	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-64	82	15	3	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTTGTTTTGTTGCT	NA	False	NA	-2	True	AATACA	-17	NA	35891949	35864212	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010504	chr16	-	524	5	ISM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	655	0	-16	0	3prime_fragment	FALSE	canonical	3	198	junction_4	3188.04854103572	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631736	84624758	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010553	chr16	-	3301	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	11	206	-6	1	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAGCATTTATTTAAGAC	NA	False	NA	NA	False	AATAAA	-24	NA	91443829	91418279	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010566	chr16	-	680	6	ISM	ENSMUSG00000022956.12	ENSMUST00000139277.8	710	7	860	-99	860	0	3prime_fragment	FALSE	canonical	3	5679	junction_2	340.84741454205	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGGAGCCTTGTCCTTT	2084	False	NA	-1	True	AATAAA	-20	NA	91727302	91722101	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010597	chr16	+	768	4	FSM	ENSMUSG00000022946.11	ENSMUST00000226335.2	1189	4	11	410	8	-410	multi-exon	FALSE	canonical	3	21	junction_1	5.24933858267454	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTCTTAGACTTAAACTT	NA	False	NA	NA	False	NA	NA	NA	93508829	93537152	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010706	chr17	-	2915	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	15	234	15	-234	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7050168	7005673	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010819	chr17	-	1128	6	FSM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	811	junction_3	58.5409258553364	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGTACCTCATAATT	NA	False	NA	-14	True	NA	NA	NA	15747571	15741836	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010828	chr17	+	2863	4	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	94	junction_1	21.5458168149231	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGAGTATGCTGCTCTT	NA	False	NA	30	True	NA	NA	NA	17225422	17261817	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_+_17225539_17257537_17257665_17257906_17257968_17259258
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010839	chr17	+	2279	4	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCCAAGTATGCTGCTC	NA	False	NA	21	True	NA	NA	NA	17399593	17426650	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010887	chr17	+	1908	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	137	-5	4	0	multi-exon	TRUE	canonical	3	384	junction_2	52.6761379583211	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3075	False	NA	34	True	AAAAAG	-45	NA	23945446	23955709	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010944	chr17	+	1085	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	52	0	-9	0	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTAGCTCTTGTGTTC	4892	False	NA	11	True	TATAAA	-24	NA	24645666	24658294	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010957	chr17	+	285	2	FSM	ENSMUSG00000093565.2	ENSMUST00000176921.2	298	2	13	0	-6	0	multi-exon	TRUE	canonical	3	77	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCAGACGTTGTG	4777	False	NA	14	True	AATAAA	-17	NA	24747234	24747718	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_24747411_24747609
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010988	chr17	+	1084	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	11	-1	11	1	multi-exon	FALSE	canonical	3	8303	junction_1	1140.19655651997	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTGTCTGTCTC	6248	False	NA	5	True	AATAAA	-24	NA	24939094	24940904	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000010998	chr17	+	930	5	NNC	ENSMUSG00000044533.16	novel	998	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	4255.17769164814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTTTTTTTTGTC	6400	False	NA	-1	True	AATAAA	-18	NA	24939246	24940898	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_24939427_24939507_24939706_24939942_24940281_24940596_24940689_24940776
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011051	chr17	+	1190	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	3	-1	3	1	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGCTTTGTACGTGGC	4606	False	NA	29	True	AATAAA	-19	NA	25459146	25461773	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011055	chr17	-	2682	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-62	-1796	4	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4534	False	NA	-1	True	ATTAAA	-19	NA	25492570	25479483	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011160	chr17	-	698	6	ISM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	125	0	4	0	3prime_fragment	FALSE	canonical	3	511	junction_5	169.834507683215	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9377	False	NA	-17	True	AATAAA	-18	NA	27158418	27156945	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011175	chr17	-	491	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	10	-1	-4	1	multi-exon	TRUE	canonical	3	2713	junction_1	153.559977424675	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAACTCATTCATC	1957	False	NA	3	True	AATAAA	-25	NA	27352880	27341635	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011228	chr17	-	570	6	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2485.82351746861	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACTTGTGTATGTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	27854202	27849395	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_27849481_27850169_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011232	chr17	-	533	5	NNC	ENSMUSG00000052146.17	novel	498	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_3	2516.64105257385	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTCCACTTGTGTATGT	NA	False	NA	NA	False	AATAAA	-13	NA	27853450	27849398	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_27849481_27850173_27850230_27851252_27851325_27853045_27853218_27853299
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011317	chr17	+	1912	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	6	-5	6	0	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTCATTAGAGCAAA	4653	False	NA	29	True	NA	NA	NA	29312748	29319701	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_29312836_29317370_29317812_29318317
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011338	chr17	-	1767	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	130	0	-34	0	multi-exon	FALSE	canonical	3	643	junction_4	160.665917948029	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566778	29551049	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011477	chr17	-	317	4	FSM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	75	0	-3	0	multi-exon	FALSE	canonical	3	4589	junction_1	7337.59253585413	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	False	NA	-11	True	AATAAA	-28	NA	34043461	34042009	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_34042091_34042170_34042305_34043272_34043321_34043407
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011534	chr17	-	516	5	FSM	ENSMUSG00000008668.16	ENSMUST00000174609.9	527	5	11	0	1	0	multi-exon	FALSE	canonical	3	518	junction_2	9115.60860557319	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174626	34170972	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_34171093_34171194_34171268_34171376_34171566_34174051_34174151_34174591
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011535	chr17	-	538	5	NNC	ENSMUSG00000008668.16	novel	560	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9338.29794448646	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174627	34170972	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_34171093_34171194_34171287_34171374_34171566_34174051_34174151_34174591
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011539	chr17	-	528	5	NNC	ENSMUSG00000008668.16	novel	560	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	9786.52957832857	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174626	34170972	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174144_34174591
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011573	chr17	+	1152	5	NNC	ENSMUSG00000060586.12	novel	1669	6	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	84.2388716686068	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCATAGAGTTTCAA	NA	False	NA	13	True	AATAAA	-17	NA	34524881	34535174	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534825
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011588	chr17	-	1074	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	46	0	28	0	multi-exon	FALSE	canonical	3	81	junction_1	4.59770474137791	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5619	False	NA	-4	True	AATAAA	-16	NA	35055875	35042968	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011597	chr17	+	1380	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	22	-3	12	3	multi-exon	TRUE	canonical	3	266	junction_1	84.0802592764794	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTCAGCCTCTAGTCT	16	False	NA	33	True	AGTAAA	-23	NA	35069395	35075233	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011608	chr17	-	426	4	FSM	ENSMUSG00000092203.8	ENSMUST00000173070.8	434	4	14	-6	-1	3	multi-exon	FALSE	canonical	3	38	junction_1	32.4995726467629	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTTTCTGTGTCACT	6021	False	NA	NA	False	AATAAA	-22	NA	35171433	35169210	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35169452_35170860_35170902_35171111_35171150_35171327
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011619	chr17	-	528	4	FSM	ENSMUSG00000092203.8	ENSMUST00000174714.8	520	4	-8	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	75.5439533575579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6022	False	NA	NA	False	AATAAA	-16	NA	35171432	35169216	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35169452_35169673_35169824_35171111_35171150_35171327
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011620	chr17	-	957	3	FSM	ENSMUSG00000092203.8	ENSMUST00000174039.8	934	3	-22	-1	0	0	multi-exon	FALSE	canonical	3	110	junction_2	40	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6022	False	NA	NA	False	AATAAA	-16	NA	35171432	35169216	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35169452_35169673_35169824_35170860
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011667	chr17	+	1465	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	54	-1	54	1	multi-exon	FALSE	canonical	3	45	junction_1	21.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4643	False	NA	15	True	AATAAA	-15	NA	35340512	35343791	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_35340775_35342028_35342636_35343195
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011669	chr17	+	1882	12	ISM	ENSMUSG00000024392.18	ENSMUST00000025250.14	3858	25	8154	1	1355	1	3prime_fragment	FALSE	canonical	3	624	junction_1	78.8443387445549	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	3328	False	NA	31	True	AATAAA	-32	NA	35362307	35366297	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011704	chr17	+	1113	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	12	6	12	-6	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGTTCTCGAAGTGTA	NA	False	NA	10	True	AATAAA	-23	NA	36132587	36133809	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_36132821_36132929
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011718	chr17	-	1673	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-3	800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4503.49930609521	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTTCTCTTTCCAC	NA	False	NA	-32	True	NA	NA	NA	36149112	36145696	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_36146917_36147045_36147166_36147519_36147629_36148888
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011805	chr17	+	1021	1	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGGCCAGCGCCTCCCCG	NA	False	NA	NA	False	NA	NA	NA	40153895	40154916	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_+_40153900_40154900
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011848	chr17	-	2080	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	1453	junction_5	311.5369990469	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45906484	45896125	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011857	chr17	-	886	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	13	-283	13	0	multi-exon	FALSE	canonical	3	164	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912879	45911896	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_45912612_45912708
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011875	chr17	+	871	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	14	-1	4	1	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTCAGTGCTTAGAAA	NA	False	NA	20	True	AATAAA	-20	NA	46421925	46439837	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000011900	chr17	+	1131	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	62	-3	62	3	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCACGGTGTCTGT	NA	False	NA	17	True	NA	NA	NA	46807698	46810553	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012023	chr17	-	1214	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	207	-1	-105	1	multi-exon	FALSE	canonical	3	57	junction_2	11.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGCCTGTTCTCTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	48739751	48726257	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_48726662_48729968_48730534_48739506
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012097	chr17	+	485	3	ISM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	39	-4	39	4	3prime_fragment	FALSE	canonical	3	9970	junction_2	629.5	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTATGTGTGAGCTC	NA	False	NA	3	True	AATAAA	-16	NA	56920454	56921247	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56920681_56920906_56921042_56921123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012100	chr17	+	578	2	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	167	-1	intron_retention	FALSE	canonical	3	9970	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTTGTGTATGTGTG	NA	False	NA	-2	True	AATAAA	-11	NA	56920582	56921242	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_56921042_56921123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012247	chr17	-	3302	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	28	740	-1	99	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	-38	True	AATAAA	-14	NA	79244467	79227174	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012353	chr17	+	4236	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	837.623946973348	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282501	88298320	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296857_88296945_88297621_88297777_88297858_88298059_88298151
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012418	chr18	+	3420	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	343	0	-6	0	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13105322	13126007	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012462	chr18	+	2759	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	12	695	10	2	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737029	24771869	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012476	chr18	+	1153	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-71	1334	7	-1334	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTGAATAAAATCTAAAG	5662	False	NA	NA	False	AATAAA	-21	NA	31937157	31967141	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012533	chr18	-	3053	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	-4	0	-4	0	multi-exon	TRUE	canonical	3	5978	junction_5	267.479905787332	774	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTGTAATCTTCT	195	False	NA	-19	True	CATAAA	-5	NA	35087414	35070466	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012551	chr18	+	1041	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	47	102	-4	-102	multi-exon	FALSE	canonical	3	167	junction_1	16.2685791225499	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTATGTGTAGGT	NA	False	NA	NA	False	NA	NA	NA	35686470	35691267	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012595	chr18	-	948	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	516	515	-9	50	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACTACTGCTTGTCTC	NA	False	NA	41	True	NA	NA	NA	36803352	36800248	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012599	chr18	+	2463	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	1	-2	1	-1	multi-exon	FALSE	canonical	3	269	junction_1	96	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812645	36816913	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_36812677_36813568_36813668_36814580
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012662	chr18	-	3861	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	403.630442136044	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395187	42335413	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369643_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012706	chr18	+	469	1	FSM	ENSMUSG00000117621.2	ENSMUST00000234633.2	515	1	-1	47	-1	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTCTGACCTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	47245204	47245673	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_47245200_47245700
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012731	chr18	+	1539	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	199	204	199	-204	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCAGCTGTTACATTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	56706092	56720580	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012743	chr18	+	1667	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	20	3343	15	378	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTTTTACTGTCATAA	NA	False	NA	NA	False	AATAAA	-37	NA	57487832	57522685	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012752	chr18	+	3374	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	9	-6	-5	6	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTGTGTATTGAATCT	NA	False	NA	NA	False	AATAAA	-24	NA	58792546	58813446	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012909	chr18	-	1101	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	45	1459	6	-279	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTTAGGAACGTGGGT	6771	False	NA	0	True	AGTAAA	-35	NA	74340844	74329828	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000012942	chr18	+	4422	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	-151	7	-151	-7	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCATCCCTTGTTGTTC	NA	False	NA	12	True	ATTAAA	-17	NA	75500448	75528999	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013050	chr19	+	1912	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	-29	-1	11	1	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGGGTCTGTGTGT	NA	False	NA	12	True	ATTAAA	-24	NA	3758303	3767882	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013131	chr19	+	1366	7	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	1	12	junction_2	1460.56872484659	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3381	False	NA	31	True	AATAAA	-20	NA	4242167	4245419	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4242271_4242743_4242873_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013164	chr19	-	2631	18	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	6	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	203.0039118719	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978269	4957258	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972421_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013216	chr19	-	521	1	NIC	ENSMUSG00000024844.16	novel	1261	3	NA	NA	1203	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	9852	False	NA	-8	True	AATAAA	-15	NA	5415188	5414667	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_5414700_5415200
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013253	chr19	-	1778	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	130	-3	0	0	multi-exon	FALSE	canonical	3	222	junction_9	58.4797768251612	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCAGGAGTTCTTACCA	3759	False	NA	-3	True	AATAAA	-18	NA	5659946	5653041	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013266	chr19	-	2623	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	32	76	11	0	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9921	False	NA	-11	True	AATAAA	-13	NA	5821415	5808454	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013358	chr19	+	867	3	FSM	ENSMUSG00000024959.15	ENSMUST00000235240.2	1169	3	302	0	-13	0	multi-exon	FALSE	canonical	3	98	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	9686	False	NA	10	True	AATAAA	-15	NA	6920233	6929261	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_6920415_6928007_6928199_6928766
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013379	chr19	-	619	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	50	-5	-11	2	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	-1	True	TTTAAA	-37	NA	6957819	6955106	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013392	chr19	-	1059	6	FSM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	15	0	15	0	multi-exon	TRUE	canonical	3	154	junction_3	27.3978101314685	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9291	False	NA	-4	True	AATAAA	-17	NA	6969856	6965278	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013438	chr19	-	1853	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	16	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1031.99464024771	89	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACTTTCATCCTTCCT	NA	False	NA	1	True	AATAAA	-24	NA	8691227	8684928	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686595_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013473	chr19	+	560	8	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	338.770646633394	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701502	8703807	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703212_8703602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013474	chr19	+	576	7	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	392.142583195903	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701502	8703807	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702098_8702791_8702888_8703145_8703191_8703430_8703467_8703602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013475	chr19	+	581	8	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	365.206790736426	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701502	8703807	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702415_8702811_8702888_8703145_8703191_8703430_8703467_8703602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013479	chr19	+	556	7	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	392.142583195903	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701502	8703807	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702098_8702811_8702888_8703145_8703191_8703430_8703467_8703602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013488	chr19	+	567	7	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	392.142583195903	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702110_8702811_8702888_8703145_8703191_8703430_8703467_8703602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013489	chr19	+	576	8	NNC	ENSMUSG00000108414.2	novel	709	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	365.206790736426	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702448_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013575	chr19	+	1385	5	FSM	ENSMUSG00000071649.7	ENSMUST00000237071.2	909	5	-57	-419	32	1	multi-exon	FALSE	canonical	3	30	junction_2	75.1644031440415	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCATGGTTTCCTTCA	4765	False	NA	20	True	AATAAA	-17	NA	8897790	8904601	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_8898013_8899169_8899345_8903067_8903263_8903445_8903737_8904099
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013588	chr19	+	1381	9	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	-1	-297	at_least_one_novel_splicesite	FALSE	canonical	1	32	junction_4	3013.83596932547	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	2017	False	NA	13	True	ATTAAA	-18	NA	8945578	8955546	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_8945739_8946525_8946590_8946727_8946871_8947207_8947357_8949877_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013635	chr19	+	872	2	ISM	ENSMUSG00000024740.11	ENSMUST00000236279.2	1279	4	1822	-492	1822	7	3prime_fragment	FALSE	canonical	3	3370	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTCTCTGCTTTTCTC	99	False	NA	63	True	AATAAA	-23	NA	10605788	10607190	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10605913_10606442
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013783	chr19	+	2518	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	84.0640555296898	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043469	38062870	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013923	chr19	-	2812	10	NIC	ENSMUSG00000025223.16	novel	2108	11	NA	NA	-8	0	intron_retention	TRUE	canonical	3	657	junction_1	53.8023359904074	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	6710	False	NA	-30	True	ATTAAA	-21	NA	46033661	46021031	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000013960	chr19	-	2737	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	18	2	0	1	multi-exon	FALSE	canonical	3	273	junction_3	19.222122671547	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTCTGACCTCTTTCT	NA	False	NA	-4	True	AATAAA	-17	NA	46384168	46365251	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014003	chr19	+	1426	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	80	-54	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAATTTGTTTTCATTTT	NA	False	NA	14	True	ATTAAA	-20	NA	47720200	47723973	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_47720261_47721068_47721192_47721288_47721428_47721957_47722351_47723262
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014017	chr19	-	2404	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	3	690	junction_19	186.942819408855	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTGTCTGCCTCTT	5073	False	NA	-1	True	AATAAA	-16	NA	53027058	52979611	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014039	chr19	-	683	3	ISM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	647	-92	599	-2	3prime_fragment	FALSE	canonical	3	143	junction_2	31.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGGGCTTGTACACT	NA	False	NA	NA	False	AATAAA	-15	NA	53932012	53919442	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_53919934_53920560_53920637_53931896
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014060	chr19	-	499	2	Antisense	novelGene_ENSMUSG00000067038.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGGGAAAAAGGTGATCT	NA	False	NA	NA	False	NA	NA	NA	59314127	59310732	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_-_59311213_59314108
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014084	chr2	+	1772	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	10	2679	10	0	multi-exon	TRUE	canonical	3	230	junction_10	26.4695873268632	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTAGTTGTTAACAAT	997	False	NA	10	True	AATAAA	-19	NA	3285258	3327235	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014123	chr2	-	1245	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	213	369	-10	2	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTACTGTGATGGTT	NA	False	NA	-5	True	AATAAA	-17	NA	5849762	5799473	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014151	chr2	-	1077	9	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1529.55171128668	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9585	False	NA	-2	True	AATAAA	-19	NA	10085240	10060840	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_10060973_10063777_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014171	chr2	+	1829	9	NNC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	98.5583583467176	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGTTATTTTA	89	False	NA	14	True	AATAAA	-14	NA	13579130	13587637	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_13579806_13580351_13580417_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014243	chr2	+	3724	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	31	0	-2	0	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3996	False	NA	33	True	ATTAAA	-21	NA	25222771	25242224	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014300	chr2	+	1572	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	48	2	11	-2	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGGGTATGTGGATCCT	2483	False	NA	15	True	AATAAA	-15	NA	26518516	26526507	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014470	chr2	+	1576	15	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	771.392869544225	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	False	NA	27	True	ATTAAA	-22	NA	31360326	31410684	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382416_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014542	chr2	+	746	7	FSM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	-15	-2	-4	0	multi-exon	FALSE	canonical	3	310	junction_1	2477.85254246943	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5807	False	NA	24	True	AATAAA	-23	NA	32851736	32854057	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014575	chr2	+	2605	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	8	0	4	0	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	False	NA	18	True	ACTAAA	-14	NA	34662114	34666543	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014584	chr2	-	1153	7	ISM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	2287	-20	-2136	0	3prime_fragment	FALSE	canonical	3	358	junction_4	38.762811502206	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	5108	False	NA	-22	True	AATAAA	-17	NA	34687453	34669228	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014768	chr2	+	2389	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	34	1	34	-1	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTTTATTTTTGTT	8603	False	NA	NA	False	AATAAA	-15	NA	72306536	72317236	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014799	chr2	-	645	4	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	220	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1987.29000288221	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741406	73738790	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_73739052_73739527_73739722_73740203_73740286_73741298
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014800	chr2	-	674	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_4	1857.0954976791	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741634	73738790	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741401_73741595
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014879	chr2	-	696	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	53	-2	-9	2	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTAAATTTTGTCTTAA	349	False	NA	-6	True	AATAAA	-27	NA	84501061	84499556	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014951	chr2	+	1637	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	8	-9	8	7	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCAGCCTCTGTGGACT	NA	False	NA	27	True	AATAAA	-28	NA	90884361	90889786	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000014980	chr2	-	719	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-25	7	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_3	1066.58860391437	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTTTTTAATATATAA	NA	False	NA	NA	False	AATAAA	-26	NA	91762069	91760165	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_91760461_91761162_91761325_91761440_91761595_91761716_91761794_91762038
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015040	chr2	-	3509	18	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	36	4166	-14	0	5prime_fragment	FALSE	canonical	3	761	junction_17	279.160307903274	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627958	103597451	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015120	chr2	+	1428	6	FSM	ENSMUSG00000003604.15	ENSMUST00000003705.12	4735	6	-13	3320	-13	342	multi-exon	FALSE	canonical	3	555	junction_4	26.4227174983952	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTTTCCTTTCTTCAC	NA	False	NA	4	True	AATAAA	-15	NA	112323295	112461598	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015134	chr2	-	777	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	24	-3	24	3	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGTTTTTCTTGGTT	NA	False	NA	1	True	ATTAAA	-19	NA	118310168	118306327	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015162	chr2	+	2263	10	NNC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	103.024029319785	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTTGTTGAGCTCC	NA	False	NA	14	True	AATAAA	-2	NA	119067853	119079996	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076812_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015201	chr2	+	1267	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	49.2084568161025	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857992	119863075	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862321_119862482_119862594
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015220	chr2	+	3114	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	40	0	40	0	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439903	120452041	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015273	chr2	-	1774	6	FSM	ENSMUSG00000033256.15	ENSMUST00000110531.9	1557	6	-216	-1	3	0	multi-exon	TRUE	canonical	3	69	junction_2	30.854497241083	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCGAGCATCCACTCGC	NA	False	NA	-10	True	TATAAA	-39	NA	122199615	122179372	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122199127
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015384	chr2	+	1882	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116344	130121233	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015405	chr2	+	923	5	FSM	ENSMUSG00000027405.17	ENSMUST00000028890.15	946	5	53	-30	-8	1	multi-exon	FALSE	canonical	3	132	junction_1	920.852152899693	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130119129	130121228	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015406	chr2	+	918	5	NNC	ENSMUSG00000027405.17	novel	946	5	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1057.78955846614	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130119129	130121228	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_130119235_130119395_130119545_130119768_130119891_130120075_130120206_130120816
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015415	chr2	-	1505	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	111	0	-2	0	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	130126356	130121228	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015472	chr2	-	1167	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	145	-122	at_least_one_novel_splicesite	FALSE	canonical	3	210	junction_2	881.92298983528	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGTGCCGCCTTTGTAC	8370	False	NA	-1	True	AATAAA	-23	NA	132095089	132091203	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_132091616_132091693_132091818_132093247_132093359_132093610_132093679_132093822_132093921_132094735
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015478	chr2	-	2671	4	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	147	-124	intron_retention	FALSE	canonical	3	2404	junction_2	56.4052795007307	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCAGTGCCGCCTTTGT	8372	False	NA	-3	True	AATAAA	-21	NA	132095087	132091205	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_132093359_132093610_132093679_132093822_132093921_132094735
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015483	chr2	+	1026	2	ISM	ENSMUSG00000044991.11	ENSMUST00000110132.3	1471	3	1666	0	1666	0	3prime_fragment	FALSE	canonical	3	78	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	27	True	NA	NA	NA	132533868	132592975	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_132534052_132592132
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015502	chr2	+	370	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	346	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135490845	135493987	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_135490892_135491052_135491123_135493733
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015535	chr2	+	1668	4	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	240	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	754.542392594493	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143757479	143785244	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_143757568_143780304_143780610_143781871_143781949_143784046
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015642	chr2	+	2575	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	219	18	219	-18	multi-exon	FALSE	canonical	3	134	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGCAATAGCCTTAGC	NA	False	NA	13	True	NA	NA	NA	151947662	151953278	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_151947868_151950908
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015645	chr2	+	977	2	FSM	ENSMUSG00000068079.6	ENSMUST00000089112.6	980	2	5	-2	5	2	multi-exon	FALSE	canonical	3	131	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTATCCTGGCTAAGTA	7094	False	NA	NA	False	AATAAA	-19	NA	151985485	151991019	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_151986059_151990615
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015666	chr2	+	917	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	17	0	17	0	multi-exon	FALSE	canonical	3	30	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGTGACTTCTTGGA	4439	False	NA	13	True	ATTAAA	-17	NA	152578187	152579330	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_152578666_152578891
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000015866	chr2	+	2258	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	8	0	8	0	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	414	False	NA	8	True	AATAAA	-16	NA	158610020	158628557	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016018	chr2	+	2158	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	344	0	-13	0	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAATGTTTTCATTTAA	NA	False	NA	24	True	AATAAA	-25	NA	167345352	167358093	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016222	chr2	+	365	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	2882.90848970272	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGCTGTTTTTAC	NA	False	NA	26	True	AATAAA	-27	NA	179899219	179900238	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_179899241_179899392_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016344	chr3	-	416	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	19	0	-5	0	multi-exon	FALSE	canonical	3	4849	junction_3	245.494512271773	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	False	NA	0	True	AATAAA	-23	NA	14676326	14671343	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016347	chr3	+	1087	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	21	1191	21	-1191	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGCCTTCCTGACAATA	2200	False	NA	13	True	ATTAAA	-18	NA	14706807	14726871	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016434	chr3	+	1005	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	74	0	-7	0	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	False	NA	10	True	AATAAA	-24	NA	32791212	32805715	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016446	chr3	+	3042	15	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	5	3587	5	-3579	5prime_fragment	FALSE	canonical	3	1060	junction_7	79.2243005391551	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTTGCATTCTTTCC	4864	False	NA	7	True	AATAAA	-16	NA	34074261	34119907	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016455	chr3	+	2453	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	-396	0	-396	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCCTGAGTCTTTCATT	4211	False	NA	19	True	AATAAA	-24	NA	34704157	34706610	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_34704200_34706600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016481	chr3	+	515	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	-26	-64	-26	64	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGTGGAATAGGATTG	7638	False	NA	NA	False	AATAAA	-30	NA	37768862	37769377	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_37768900_37769400
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016500	chr3	+	5463	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	12	6	2	0	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510177	41571293	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016603	chr3	+	4052	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	264	0	-6	0	multi-exon	FALSE	canonical	3	521	junction_3	142.05353233605	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912334	68941956	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016619	chr3	-	1389	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	55	483	10	303	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTCCTTAATCACTT	NA	False	NA	-14	True	AATAAA	-17	NA	75464108	75424279	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016647	chr3	-	856	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	120	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3910.13807428843	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049889	86045251	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049000_86049109_86049814
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016702	chr3	+	1558	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	28	2633	-4	99	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGAGTCTTTTGTTTGT	4023	False	NA	16	True	TTTAAA	-26	NA	88232357	88235987	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016772	chr3	-	1135	9	NNC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	481	0	at_least_one_novel_splicesite	FALSE	canonical	1	39	junction_1	988.372644489415	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89008141	89000894	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_89001148_89001537_89001673_89001758_89001833_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016776	chr3	-	1138	9	NNC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	481	0	at_least_one_novel_splicesite	FALSE	canonical	1	99	junction_3	741.940350954846	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89008141	89000894	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_89001151_89001537_89001673_89001758_89001833_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016777	chr3	-	1135	9	NNC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	481	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	774.420065274654	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89008141	89000894	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_89001151_89001537_89001673_89001758_89001837_89002173_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016871	chr3	+	2320	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	44	0	44	0	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGGTATCTGATTCT	NA	False	NA	-1	True	AATAAA	-16	NA	90155522	90160919	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016879	chr3	-	948	3	ISM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	10785	0	2395	0	3prime_fragment	FALSE	canonical	3	97	junction_2	38	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90362388	90357897	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90358490_90358612_90358705_90362124
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016903	chr3	-	601	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	77	-1	-37	1	multi-exon	FALSE	canonical	3	340	junction_1	21.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTGTACCCTCTGG	NA	False	NA	-2	True	AATAAA	-21	NA	90421622	90418339	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_90418672_90419302_90419457_90421507
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000016986	chr3	+	1370	13	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.7027733837078	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95467001	95494907	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95482803_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017087	chr3	-	3683	23	FSM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	-8	4	-8	-4	multi-exon	FALSE	canonical	3	297	junction_17	44.2662166204014	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	101512008	101483538	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017137	chr3	-	2764	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	136	5	6	-5	multi-exon	FALSE	canonical	3	276	junction_2	22.5302019520465	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTCAGTTTATTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	105594754	105585590	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017165	chr3	-	3203	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	12	0	12	0	multi-exon	FALSE	canonical	3	175	junction_2	23.6893963620857	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107538998	107519847	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017176	chr3	-	1066	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	626	junction_6	40.3692143766479	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2040	False	NA	-4	True	AATAAA	-13	NA	107893771	107889017	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017217	chr3	-	3021	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	24	453	24	-453	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGTTATCTGTCTCCT	NA	False	NA	-3	True	AATAAA	-15	NA	108629601	108586406	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017223	chr3	+	1266	9	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	90.812220405626	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	7748	False	NA	8	True	AATAAA	-18	NA	115681821	115722737	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157_115722405_115722480
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017242	chr3	+	382	1	FSM	ENSMUSG00000106037.2	ENSMUST00000196114.2	346	1	-2	-34	-2	34	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGCTGGCAAAAAAAAAA	NA	False	NA	26	True	NA	NA	NA	119503162	119503544	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_119503200_119503500
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017246	chr3	+	991	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	-27	1073	-27	314	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGTTCTCTTGGGACT	NA	False	NA	26	True	AATAAA	-27	NA	121085394	121155670	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017304	chr3	+	461	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4173	1993	4173	-1993	3prime_fragment	FALSE	canonical	3	92	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTAATGGGATCCCTGT	NA	False	NA	8	True	NA	NA	NA	129551579	129555540	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_129551788_129555287
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017391	chr3	+	1323	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	-26	-2	-6	2	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTGTATAGGCCTCT	54	False	NA	4	True	AATAAA	-24	NA	137624260	137634528	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017478	chr3	-	2236	2	ISM	ENSMUSG00000052544.10	ENSMUST00000199707.2	416	3	19055	-1899	19055	1899	3prime_fragment	FALSE	canonical	3	111	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	152912365	152909103	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_152911229_152912254
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017482	chr3	-	1310	8	FSM	ENSMUSG00000038975.15	ENSMUST00000167111.6	1418	8	112	-4	0	2	multi-exon	FALSE	canonical	3	355	junction_5	235.209329261041	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATATAGCTTTTTAT	7076	False	NA	2	True	AATAAA	-19	NA	153617670	153612921	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017484	chr3	-	1406	9	FSM	ENSMUSG00000038975.15	ENSMUST00000200209.5	1169	9	48	-285	0	0	multi-exon	FALSE	canonical	3	607	junction_3	165.057565715722	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	7076	False	NA	0	True	AATAAA	-17	NA	153617670	153612923	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017508	chr3	+	1931	8	NNC	ENSMUSG00000028199.19	novel	2507	9	NA	NA	-1556	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	67.4890769695666	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	False	NA	18	True	AGTAAA	-18	NA	154310527	154328819	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327736
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017543	chr4	-	499	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	3570.73627639392	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	9	False	NA	-37	True	AATAAA	-18	NA	3835589	3834469	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_3834684_3834935_3835010_3835191_3835292_3835478
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017568	chr4	-	1928	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	11	1914	11	-1914	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCACTCTCAATTTGG	10	False	NA	NA	False	AATAAA	-19	NA	8239030	8145275	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017586	chr4	-	929	9	NNC	ENSMUSG00000050323.15	novel	675	6	NA	NA	4	-802	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	135.700439848219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGAGCGTCACAGCACA	6	True	NA	NA	False	NA	NA	NA	11076179	11052014	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_11052064_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073139_11073244_11075979
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017603	chr4	+	1837	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-45	739	multi-exon	FALSE	canonical	3	4269	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	3	True	NA	NA	False	AAAAAG	-13	NA	12232787	12234690	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_12232839_12232904
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017606	chr4	+	1550	1	FSM	ENSMUSG00000060989.9	ENSMUST00000125165.2	1119	1	-45	-386	-45	386	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTAGTTCAGTTTT	3	True	NA	NA	False	NA	NA	NA	12232787	12234337	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_12232800_12234300
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017648	chr4	+	1093	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-23	1288	-23	-1268	multi-exon	FALSE	canonical	3	446	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGTTCTTTGTAGT	-12	True	NA	19	True	ATTAAA	-19	NA	24898107	24902217	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_24898677_24901693
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017730	chr4	-	1754	6	FSM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	11	0	11	0	multi-exon	FALSE	canonical	3	1694	junction_1	130.458269189806	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	10	False	NA	-4	True	AATAAA	-21	NA	41098172	41092721	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017745	chr4	+	833	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	12	0	12	0	multi-exon	FALSE	canonical	3	137	junction_1	26.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGATGCTTTCTTGGAC	16	False	NA	32	True	AATAAA	-28	NA	41465162	41480926	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_41465181_41477513_41477648_41480245
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017747	chr4	-	4201	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-28	0	-28	0	multi-exon	FALSE	canonical	3	158	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTTGTTTTCTTGCT	-20	True	NA	-2	True	NA	NA	NA	41503104	41495603	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41499691_41502990
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017801	chr4	-	600	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	12	-2	-6	0	multi-exon	FALSE	canonical	3	693	junction_3	25.1433390781734	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATCCCTGTCTTAAA	0	True	NA	-5	True	AATAAA	-16	NA	43656454	43654226	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017814	chr4	+	1038	5	NNC	ENSMUSG00000028478.19	novel	1710	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	570.736092690834	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	4	True	NA	21	True	AATAAA	-21	NA	44012681	44032846	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_44013009_44018812_44018851_44019876_44019992_44025448_44025561_44032400
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017912	chr4	+	1497	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	55	0	-15	0	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	-13	True	NA	10	True	AATAAA	-21	NA	53011934	53022060	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017926	chr4	-	3061	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-26	-6	-26	6	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTTTTTTC	834	False	NA	-1	True	AATAAA	-27	NA	55532492	55527136	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000017981	chr4	-	1350	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-142	-2	-142	2	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTCTTCCTGCCC	NA	False	NA	1	True	AGTAAA	-20	NA	62438297	62427403	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018129	chr4	+	1498	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	277	0	9	0	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGAGTGTTGGGCTTTCT	NA	False	NA	15	True	ATTAAA	-27	NA	107035872	107058193	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018193	chr4	+	1544	1	FSM	ENSMUSG00000073775.5	ENSMUST00000102738.4	1629	1	85	0	85	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGGTCTCTTGATGTA	NA	False	NA	9	True	AATAAA	-15	NA	108705066	108706610	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_108705100_108706600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018221	chr4	+	2460	12	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	8984	2	-8815	-2	3prime_fragment	TRUE	canonical	3	106	junction_11	24.3565118484049	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115705413	115736445	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018333	chr4	-	1011	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	-10	-1	-6	1	multi-exon	FALSE	canonical	3	2123	junction_7	187.196393650942	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGCTTCTGTTGGCCCCT	NA	False	NA	0	True	AATAAA	-22	NA	117744536	117741521	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018392	chr4	-	1491	7	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3852.6583030422	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151685	119135177	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119150925_119151003_119151400
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018543	chr4	-	1656	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	19	-3	19	3	multi-exon	FALSE	canonical	3	286	junction_3	41.9218320210365	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTTCCTGTCTCCAC	7095	False	NA	NA	False	AATAAA	-23	NA	126215477	126209836	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018552	chr4	+	790	5	NNC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1525.9428233063	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	5428	False	NA	19	True	AATAAA	-21	NA	126571470	126603507	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600043_126603271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018568	chr4	-	3338	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	25	489	-3	10	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTTTGTTTGTTGGAG	NA	False	NA	NA	False	ATTAAA	-30	NA	126954920	126941375	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018571	chr4	+	1113	3	FSM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	7	0	7	0	multi-exon	FALSE	canonical	3	98	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019845	127023437	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_127019987_127021611_127021793_127022646
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018643	chr4	+	1536	2	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	63	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTCATTGAGTGGT	NA	False	NA	14	True	AATAAA	-14	NA	129407436	129409768	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_129407714_129408509
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018649	chr4	-	2034	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	9	-5	9	5	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGTTTAAGTTCTTCC	8817	False	NA	0	True	AATAAA	-27	NA	129436497	129409891	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018684	chr4	+	1497	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	58	-4	58	3	multi-exon	FALSE	canonical	3	185	junction_1	25.1047804212664	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGACTGTGTGTCCGT	9336	False	NA	29	True	AATAAA	-36	NA	130001406	130021931	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018686	chr4	-	1942	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	11	-1	1	1	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCTGGGAGTCTTCAA	NA	False	NA	NA	False	AATAAA	-20	NA	130068584	130059393	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018717	chr4	+	1338	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	12	2437	12	617	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTGTCCATAGGACCT	NA	False	NA	26	True	AATAAA	-22	NA	132001697	132020640	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018728	chr4	-	1109	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	21	0	-1	0	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2337	False	NA	0	True	AATAAA	-17	NA	132056828	132039073	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018739	chr4	-	790	2	ISM	ENSMUSG00000028896.14	ENSMUST00000155129.2	507	6	-16	14111	-16	-12443	5prime_fragment	FALSE	canonical	3	1001	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080932	132079244	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132080010_132080907
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018753	chr4	+	1387	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	15	-1	-2	1	multi-exon	TRUE	canonical	3	2684	junction_8	233.065676097962	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTCCTCCTCGGGTG	2346	False	NA	20	True	AATAAA	-20	NA	132262875	132281054	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018772	chr4	-	2934	8	FSM	ENSMUSG00000028878.12	ENSMUST00000097856.10	1863	8	-33	-1038	32	0	multi-exon	FALSE	canonical	3	35	junction_3	31.9367998345712	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTGATTCAGTTG	NA	False	NA	0	True	AATAAA	-19	NA	132649837	132626523	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018776	chr4	-	1471	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	14	-1	-8	1	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTCATTTTCTTC	NA	False	NA	-11	True	AATAAA	-15	NA	133005089	132993354	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018803	chr4	-	1181	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	83	1	-9	-1	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTCTGATCTTTCCC	NA	False	NA	NA	False	AATAAA	-24	NA	133695229	133692049	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018844	chr4	+	1405	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	45	299	-8	0	multi-exon	FALSE	canonical	3	162	junction_3	305.166348079207	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650947	134654683	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018893	chr4	-	568	5	NIC	ENSMUSG00000059291.16	novel	807	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_4	4830.22589404471	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	-4	True	AATAAA	-40	NA	135780029	135777257	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779028_135779877
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000018968	chr4	+	3133	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	246	3	3	0	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATTTTGATCGTGTGT	NA	False	NA	23	True	NA	NA	NA	139350422	139376998	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019053	chr4	-	1785	2	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTGCTTCTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	143715102	143710653	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr4_-_143712141_143714804
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019065	chr4	+	2332	2	Fusion	ENSMUSG00000082082.2_ENSMUSG00000085101.8	novel	375	3	NA	NA	-14292	776	multi-exon	FALSE	canonical	3	59	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTTTGGTTGTTTTC	NA	False	NA	20	True	NA	NA	NA	145159017	145178234	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Fusion_chr4_+_145159152_145176036
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019069	chr4	+	2114	2	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	2726	776	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTTTGGTTGTTTTC	NA	False	NA	20	True	NA	NA	NA	145176035	145178234	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_145176277_145176361
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019129	chr4	+	2111	4	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_2	250.152397994147	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTTTGGTTGTTTTC	2316	False	NA	NA	False	NA	NA	NA	146289374	146319728	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr4_+_146289526_146291416_146291510_146312866_146312972_146317966
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019161	chr4	+	730	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33238	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	293.616348318686	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500241	146550672	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146547961_146548020_146548860_146548988_146550437
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019182	chr4	+	587	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16630	-4078	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	300.651376181783	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTCTGTAAACAGTTTA	1864	False	NA	NA	False	AATACA	-1	NA	146516849	146550671	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_146516986_146533486_146533533_146547961_146548024_146548878_146548988_146550437
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019262	chr4	-	2629	5	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	381	-1	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	104.533487457369	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTTTGGTTGTTTTC	9904	False	NA	NA	False	NA	NA	NA	147893864	147838431	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_147840693_147842158_147842286_147845677_147845736_147891546_147891641_147893775
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019291	chr4	-	1154	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	194	-2	-73	2	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTGAGGGCTTACAGG	NA	False	NA	-15	True	AATAAA	-19	NA	148236176	148230241	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019294	chr4	-	1160	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	11	69	11	2	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTGAGGGCTTACAGG	NA	False	NA	-15	True	AATAAA	-19	NA	148236581	148230241	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019308	chr4	+	1337	7	FSM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	-9	10	-9	-10	multi-exon	FALSE	canonical	3	3072	junction_6	112.657297440808	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCTGACCTTTTCATT	8707	False	NA	18	True	AATACA	-26	NA	148675950	148679066	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019314	chr4	-	1197	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	1	True	AATAAA	-29	NA	148711216	148701169	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019316	chr4	-	2166	7	NIC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	-2	3	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	1	True	AATAAA	-29	NA	148711217	148701169	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019448	chr4	+	435	3	NNC	ENSMUSG00000028936.16	novel	369	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2901	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152411936	152416937	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_152412043_152414460_152414569_152416716
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019451	chr4	+	421	3	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2798	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152411936	152416937	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_152412047_152414475_152414586_152416736
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019455	chr4	+	1086	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	12	0	-6	0	multi-exon	FALSE	canonical	3	743	junction_1	42.5519290592879	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	154041705	154046382	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019608	chr5	-	2599	17	ISM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	775	178	493	-178	3prime_fragment	FALSE	canonical	3	168	junction_6	21.4938217867368	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGAGCTAGCAGCTTT	NA	False	NA	0	True	ATTAAA	-21	NA	9046549	9016210	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019677	chr5	-	2445	13	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	740	0	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_12	388.852549889486	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24781725	24770342	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779375_24781516
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019798	chr5	+	394	3	FSM	ENSMUSG00000106918.4	ENSMUST00000201923.2	773	3	451	-72	451	0	multi-exon	FALSE	canonical	3	1626	junction_1	353.5	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771946	31779988	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_31771966_31773724_31773832_31779720
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019848	chr5	-	2541	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	91	2640	11	221	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTCATCATTCC	NA	False	NA	NA	False	AATAAA	-25	NA	33940070	33899656	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019882	chr5	-	1422	8	NNC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	3	92	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_2	299.112223837441	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGAGTCCTTGCCTGGTA	NA	False	NA	-6	True	AATACA	-17	NA	35263030	35250320	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_35250731_35252193_35252368_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000019947	chr5	+	2235	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	15	17	15	-17	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTTCACTGTGATT	NA	False	NA	18	True	AATAAA	-17	NA	45650730	45670016	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020018	chr5	-	697	7	FSM	ENSMUSG00000047215.15	ENSMUST00000196667.5	675	7	-8	-14	-3	0	multi-exon	FALSE	canonical	3	29	junction_1	5003.25345539169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548337	65545706	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_65545811_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020021	chr5	-	791	6	ISM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	386	-114	-3	0	3prime_fragment	FALSE	canonical	3	9546	junction_5	1808.27991196053	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548337	65545706	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020026	chr5	-	668	7	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4694.82527186405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTTGTGTGTCCTTGT	NA	False	NA	-11	True	AATAAA	-11	NA	65548337	65545711	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_65545785_65545904_65546023_65546411_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020049	chr5	+	1008	8	NIC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	8	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	178.588113506231	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTATTTTCTCTTTC	NA	False	NA	35	True	AATAAA	-24	NA	66833592	66844579	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_66833666_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020059	chr5	+	2415	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	129	3703	-2	1099	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACTGATTTCTAATGATG	NA	False	NA	15	True	AATAAA	-22	NA	67418036	67445101	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020077	chr5	-	1453	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	9	2433	9	3	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGCTTGATTTCAGT	NA	False	NA	-1	True	AATACA	-17	NA	72325523	72316350	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020123	chr5	-	3567	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	363	51	-50	-51	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATCTGATTTTTTAGG	NA	False	NA	-2	True	TATAAA	-20	NA	77099062	77061173	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020166	chr5	+	2882	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	192	4	192	-4	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTCTGAGACTTTAAAAT	NA	False	NA	23	True	AATAAA	-20	NA	88913046	88931136	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020244	chr5	-	1389	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	766	-6	-3	0	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186757	100182579	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020246	chr5	-	2403	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-29	0	-3	0	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186757	100182579	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020287	chr5	+	1468	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	10	10	10	-10	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGACTTGTGTTTC	NA	False	NA	10	True	AATAAA	-13	NA	104194744	104213235	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020296	chr5	+	1447	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	12	-3	-6	0	multi-exon	FALSE	canonical	3	593	junction_1	2050.93187491822	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	31	True	AATAAA	-18	NA	104582998	104588916	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020317	chr5	+	2030	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	15	0	15	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	2248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGCATTCTTAATT	NA	False	NA	24	True	AATAAA	-18	NA	108048382	108056871	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020384	chr5	-	1063	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	-26	4	-26	-4	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGTTTCTCAGCAC	NA	False	NA	0	True	AATAAA	-24	NA	110434078	110422151	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020436	chr5	+	2839	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	36	685	-27	115	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGAATAACGTCTCTA	NA	False	NA	25	True	AATAAA	-17	NA	112474259	112485254	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020447	chr5	-	793	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTCTATGTGCAATCT	NA	False	NA	-3	True	NA	NA	NA	113734495	113711249	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_-_113711932_113734384
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020469	chr5	-	895	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	13	-9	13	0	multi-exon	FALSE	canonical	3	267	junction_3	133.312498372141	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7991	False	NA	-2	True	AATAAA	-22	NA	114266266	114261986	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020582	chr5	+	1054	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	18	16	18	-16	multi-exon	FALSE	canonical	3	209	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGCTCCCAAAACCCT	2432	False	NA	28	True	AATAAA	-20	NA	115479301	115481612	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_115479477_115480733
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020610	chr5	+	1068	6	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	162	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8684.88731993686	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697843	115701574	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_115697948_115698799_115699064_115699164_115699305_115699391_115699578_115700484_115700626_115701341
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020611	chr5	+	1069	6	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	162	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8627.74091868781	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697843	115701574	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701347
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020762	chr5	-	2465	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	35	260	-10	2	multi-exon	TRUE	canonical	3	1165	junction_8	284.126264845403	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTTTTTTTTTATTTTT	NA	False	NA	-15	True	AATAAA	-24	NA	122959367	122925781	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020776	chr5	+	1360	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	68	1169	0	435	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTCAGTATATTC	NA	False	NA	23	True	NA	NA	NA	123366320	123387025	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020871	chr5	+	2323	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	54	0	54	0	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	1321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAGTCATCTCTAGT	396	False	NA	21	True	AATATA	-23	NA	129097186	129101387	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000020939	chr5	-	1545	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	42	237	6	0	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTCTGCCTGTGGTCC	NA	False	NA	-1	True	AATAAA	-30	NA	130053180	130040335	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021036	chr5	+	894	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	9	0	9	0	multi-exon	FALSE	canonical	3	2181	junction_2	11	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTCCAGAGTTATTA	NA	False	NA	7	True	AATAAA	-25	NA	135916781	135918417	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_135917289_135917902_135917967_135918094
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021098	chr5	-	1644	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	216	0	3	0	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTCTCCTTGCTTACTG	1748	False	NA	-5	True	CATAAA	-22	NA	137531556	137526388	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021119	chr5	+	1017	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	23	7	23	-3	intron_retention	FALSE	canonical	3	301	junction_1	64	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAATTACCGAACTGTT	NA	False	NA	-2	True	AATAAA	-11	NA	137777188	137778365	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_137777484_137777563_137777808_137777887
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021213	chr5	+	2966	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-14	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	756.13551270936	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCCTGATCTCTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	140405068	140429118	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418894_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021258	chr5	+	1834	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-2	-3	-2	3	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGTCTTTTCTATGAA	NA	False	NA	NA	False	AATAAA	-18	NA	143389590	143407659	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021271	chr5	+	2157	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	25	16	-15	-16	multi-exon	FALSE	canonical	3	103	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTATTTTGTGTGTG	NA	False	NA	10	True	AATAAA	-23	NA	143534485	143550264	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_143534890_143548511
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021283	chr5	-	1170	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	15	0	15	0	multi-exon	FALSE	canonical	3	560	junction_3	88.5023540176569	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846642	143839521	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021295	chr5	+	2539	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTTCTTGTTCTCTC	NA	False	NA	11	True	ATTAAA	-17	NA	144482708	144494288	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021357	chr5	+	1013	4	NIC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	8667	junction_3	2199.13806347447	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146770990	146772796	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_146771073_146771257_146771915_146772373_146772525_146772673
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021371	chr5	+	705	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	493	-2	-5	2	multi-exon	FALSE	canonical	3	451	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGGTTTCTCTTCCT	NA	False	NA	24	True	NA	NA	NA	147014352	147015898	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_147014504_147015344
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021417	chr6	-	3078	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_13	48.4240210344906	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	6	True	NA	-3	True	AATAAA	-16	NA	6217132	6041217	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021622	chr6	+	947	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	-11	-3	-4	0	multi-exon	FALSE	canonical	3	282	junction_1	935.620961358462	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448397	40457929	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021632	chr6	-	862	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTAGTGTAATTGGATTC	NA	False	NA	-15	True	AGTAAA	-18	NA	47161997	47161135	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr6_-_47161100_47162000
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021658	chr6	+	747	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	39	2033	-14	40	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGAGCCATCTGCTT	334	False	NA	19	True	AATAAA	-28	NA	49050767	49061652	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021690	chr6	-	1276	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	-22	1869	-22	805	multi-exon	FALSE	canonical	3	4909	junction_2	335	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGATTGTGCTTTGTT	NA	False	NA	-8	True	ATTAAA	-18	NA	50543540	50541411	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_50542366_50542471_50542649_50543395
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021732	chr6	+	787	1	ISM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	12388	0	5460	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51459897	51460684	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_51459900_51460700
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021810	chr6	-	1208	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	12	3	12	-3	multi-exon	FALSE	canonical	3	118	junction_1	3.77123616632825	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATTTCTCAACGTGT	NA	False	NA	-10	True	AATAAA	-16	NA	67014378	67012082	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021912	chr6	-	1080	3	ISM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	49674	-60	-205	60	3prime_fragment	FALSE	canonical	3	1059	junction_2	68.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	NA	False	NA	-24	True	AATAAA	-24	NA	72826601	72819491	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72820114_72825207_72825491_72826426
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021920	chr6	-	472	3	NNC	ENSMUSG00000079523.9	novel	570	3	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13607.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGGTCTGAATTTTTT	NA	False	NA	-12	True	AATAAA	-19	NA	72935370	72934330	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72934636_72934891_72935008_72935319
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000021953	chr6	+	1899	9	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	9505	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	187.106545516184	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82933387	83007163	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003390_83005372_83005514_83006750
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022052	chr6	+	1636	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	12	-5	12	5	multi-exon	FALSE	canonical	3	1740	junction_2	62	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATGGGTAGTGATATA	8629	False	NA	37	True	AATAAA	-21	NA	86342639	86347045	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_86342802_86343591_86343733_86345712
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022115	chr6	-	1205	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	12	0	12	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTCGTTGTCTTGTGG	6921	False	NA	-2	True	AATAAA	-16	NA	87958607	87957402	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_87957400_87958600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022133	chr6	+	1643	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	26	6	26	-6	multi-exon	FALSE	canonical	3	1160	junction_1	83.5499850388975	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGTAGGTTTTTATA	NA	False	NA	25	True	AATAAA	-25	NA	88442416	88474548	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022196	chr6	-	2146	17	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	300	-4	212	4	3prime_fragment	FALSE	canonical	3	534	junction_12	65.1210411464682	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	-3	True	AATAAA	-28	NA	97182308	97160963	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022262	chr6	+	1178	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	23	0	-3	0	multi-exon	FALSE	canonical	3	705	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTGTTGGAGATTTGAT	NA	False	NA	33	True	AATAAA	-37	NA	113419552	113425190	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_113419759_113424218
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022408	chr6	+	818	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	21	-6	21	6	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTTGTAATTTACACAAA	701	False	NA	30	True	AATAAA	-20	NA	122603389	122607237	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022413	chr6	+	2170	4	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	38	0	intron_retention	FALSE	canonical	3	354	junction_3	1978.73567938947	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684564	122691592	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_122684893_122688496_122688763_122689587_122689675_122690103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022425	chr6	-	3700	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3012.78332001047	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8928	False	NA	-19	True	AATAAA	-14	NA	122719466	122704782	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_122707100_122708351_122708556_122709329_122709417_122709719_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022441	chr6	+	1939	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	94	248	-51	153	multi-exon	TRUE	canonical	3	738	junction_2	58.4776785524946	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTAGCATCCCAGACTGC	NA	False	NA	33	True	GATAAA	-27	NA	124640083	124681133	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022483	chr6	-	1144	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	11	-6	11	6	multi-exon	FALSE	canonical	3	521	junction_3	90.7837402842601	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTCCCGCAGTCCG	NA	False	NA	0	True	AATAAA	-32	NA	124894898	124890637	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022494	chr6	-	749	4	NNC	ENSMUSG00000030122.13	novel	629	4	NA	NA	233	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	322.047960541421	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTAACCCGTCTCCTG	NA	False	NA	-15	True	AATAAA	-17	NA	124891954	124890652	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_124891196_124891370_124891430_124891597_124891677_124891886
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022633	chr6	+	472	1	FSM	ENSMUSG00000071141.8	ENSMUST00000120093.2	321	1	-72	-79	-72	79	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGTGCATCCCTGAGA	2051	False	NA	NA	False	AATAAA	-18	NA	136465732	136466204	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_136465700_136466200
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022655	chr6	-	1212	7	ISM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	2384	-3	2246	0	3prime_fragment	FALSE	canonical	3	685	junction_1	55.897972533298	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142451285	142435974	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022762	chr7	+	822	3	FSM	ENSMUSG00000008373.17	ENSMUST00000143231.2	827	3	42	-37	-25	37	multi-exon	FALSE	canonical	3	674	junction_1	159.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTGTTTTCTAATTGT	2982	False	NA	NA	False	AATAAA	-22	NA	3633032	3634457	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_3633056_3633556_3633742_3633843
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022782	chr7	+	1334	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	-1	-14	-1	6	multi-exon	FALSE	canonical	3	1035	junction_3	83.107694522763	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGTCCTTACAACAAT	2932	False	NA	12	True	AATAAA	-22	NA	3697520	3704017	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022792	chr7	+	701	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6014.33381597663	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	1320	False	NA	7	True	AATAAA	-22	NA	3707047	3709900	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_3707064_3707325_3707448_3707644_3707770_3708731_3708919_3709649
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022799	chr7	+	694	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	1	178	junction_2	6091.15630956061	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	1322	False	NA	7	True	AATAAA	-22	NA	3707049	3709900	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_3707064_3707325_3707448_3707647_3707768_3708731_3708919_3709649
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022928	chr7	+	716	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	6959.31696073688	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656256	12660613	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_12656316_12656899_12657009_12659318_12659524_12659663_12659793_12660322_12660422_12660498
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000022940	chr7	-	2073	3	NIC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	5	45	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743744	12739592	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_12740308_12740950_12742257_12743692
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023181	chr7	+	582	7	FSM	ENSMUSG00000040952.17	ENSMUST00000129847.8	593	7	12	-1	-6	1	multi-exon	FALSE	canonical	3	397	junction_3	8759.20174096298	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGGATCTGGTTTT	NA	False	NA	27	True	AATAAA	-17	NA	24584069	24589232	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023189	chr7	+	654	6	NIC	ENSMUSG00000040952.17	novel	633	6	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	10491.1802119685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584102	24589231	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_24584280_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023261	chr7	+	2699	10	FSM	ENSMUSG00000063160.13	ENSMUST00000079258.7	2760	10	65	-4	7	1	multi-exon	FALSE	canonical	3	70	junction_4	11.8415464455544	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGAAATCAAGGTGTGTG	NA	False	NA	13	True	AATAAA	-22	NA	26958214	26981570	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023388	chr7	+	1161	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	108	-2	-24	2	multi-exon	TRUE	canonical	3	645	junction_5	36.3137901908447	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGTCTTTACTGCAGTG	NA	False	NA	16	True	AATAAA	-14	NA	28524749	28531674	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023437	chr7	+	2573	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	41	0	41	0	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGTTTCATAATTTTC	NA	False	NA	27	True	AATAAA	-24	NA	29607982	29616232	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023488	chr7	+	1271	3	FSM	ENSMUSG00000036854.15	ENSMUST00000123355.8	1298	3	28	-1	28	0	multi-exon	FALSE	canonical	3	18	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	False	NA	9	True	AATAAA	-17	NA	30251976	30254865	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_30252153_30253686_30253810_30253893
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023546	chr7	-	1937	8	FSM	ENSMUSG00000036459.16	ENSMUST00000038537.9	1962	8	27	-2	27	2	multi-exon	FALSE	canonical	3	249	junction_5	31.7027005866976	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGGTTATTTCTCAT	NA	False	NA	0	True	AATATA	-22	NA	33832666	33808965	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023609	chr7	-	1529	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	33	3701	33	-3701	multi-exon	FALSE	canonical	3	140	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGATTGTTAAGAGT	NA	False	NA	-20	True	NA	NA	NA	37927407	37920096	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_37921583_37927364
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023623	chr7	-	3181	4	FSM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	-33	0	-9	0	multi-exon	FALSE	canonical	3	231	junction_3	55.1784982277215	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	42342175	42309528	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_42312421_42314181_42314243_42314441_42314569_42342074
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023682	chr7	+	1749	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	221	-1	-2	1	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAGAGTTCAGTGTTCA	NA	False	NA	17	True	AATAAA	-17	NA	44398057	44426940	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023694	chr7	+	1692	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	-102	2	-102	2	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGTTGTGTGTGAGTGT	1298	False	NA	17	True	ATTAAA	-22	NA	44498545	44504843	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023700	chr7	+	1664	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	178	342	-3	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9513	False	NA	15	True	AATAAA	-17	NA	44506760	44512074	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023789	chr7	-	662	8	FSM	ENSMUSG00000074129.15	ENSMUST00000210967.2	658	8	-4	0	-1	0	multi-exon	FALSE	canonical	3	190	junction_2	5939.18297480076	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778148	44775345	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023858	chr7	-	2278	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	55	0	55	0	multi-exon	FALSE	canonical	3	356	junction_2	34	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	3916	False	NA	44	True	AATAAA	-24	NA	45175637	45172340	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45172747_45173162_45174816_45175418
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023909	chr7	+	2147	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	328	-9	6	5	multi-exon	FALSE	canonical	3	48	junction_2	6.94422221866655	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGTGTGGCTGCAGGTC	5980	False	NA	12	True	AATAAA	-19	NA	45546852	45566842	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000023977	chr7	+	721	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	103	4	8	0	multi-exon	FALSE	canonical	3	203	junction_2	55.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042495	64061869	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_64042592_64049916_64050255_64061582
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024088	chr7	+	1971	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27018	0	27018	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80791615	80820164	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024109	chr7	+	711	4	FSM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	22	-8	22	4	multi-exon	FALSE	canonical	3	35	junction_1	29.9777695412228	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGTATTATGTTTT	NA	False	NA	12	True	AATAAA	-17	NA	81173340	81181250	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_81173425_81178534_81178689_81179094_81179276_81180958
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024185	chr7	-	727	5	FSM	ENSMUSG00000030615.13	ENSMUST00000136652.8	756	5	24	5	1	-5	multi-exon	FALSE	canonical	3	71	junction_2	308.308591349641	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGTCTGCAACATTAAAA	1690	False	NA	NA	False	AATAAA	-14	NA	90106392	90099912	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_90100144_90100750_90100866_90101936_90102109_90104631_90104728_90106279
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024293	chr7	+	3098	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	116	0	12	0	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256908	100290475	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024364	chr7	-	2383	12	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	181	1111	38	-3	3prime_fragment	FALSE	canonical	3	296	junction_11	21.0119997199554	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	1	True	AATAAA	-27	NA	105401261	105395128	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024413	chr7	+	4719	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	47	-3	6	3	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTGTTTTTCTTG	7245	False	NA	NA	False	AAGAAA	-5	NA	109617527	109655819	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024449	chr7	-	2264	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	11	0	-6	0	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGCTTGACGGCTCCTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	113717005	113646016	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024496	chr7	-	870	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	44	0	2	0	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6669	False	NA	-2	True	AATAAA	-16	NA	118132535	118124284	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024628	chr7	+	397	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	510	359	-20	2	multi-exon	FALSE	canonical	3	2284	junction_2	148	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTCAGTGTGCTGTTTG	1121	False	NA	24	True	ATTAAA	-19	NA	126295117	126295871	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126295272_126295354_126295453_126295726
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024644	chr7	-	1413	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	-11	-2	-11	0	multi-exon	FALSE	canonical	3	2424	junction_1	142.291307979548	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	5215	False	NA	NA	False	AATAAA	-15	NA	126391523	126385037	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024650	chr7	-	1436	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6715.62710679353	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTCATGTCTTGTA	NA	False	NA	-2	True	AATAAA	-19	NA	126398345	126394404	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396810_126396949_126398216
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024702	chr7	-	2072	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	45	-2	-17	0	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7970	False	NA	-4	True	AATACA	-15	NA	126641598	126626900	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024706	chr7	+	1868	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	64	0	-1	0	multi-exon	FALSE	canonical	3	90	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTGTATGACCTCTG	NA	False	NA	6	True	NA	NA	NA	126690594	126693158	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126690645_126691340
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024753	chr7	+	1987	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	415	0	4	0	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	False	NA	8	True	TATAAA	-13	NA	127071076	127075930	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024774	chr7	+	1509	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	13	57	13	-57	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCAAAGGGTGGTATTC	NA	False	NA	35	True	AGTAAA	-36	NA	127511700	127524952	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024777	chr7	+	1827	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	41	3668	7	1	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCCCCCAGTTTACT	1191	False	NA	38	True	ATTAAA	-21	NA	127566669	127581205	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024833	chr7	+	1610	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	2	0	2	0	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGCCTTTCTTA	NA	False	NA	12	True	AATAAA	-20	NA	132212369	132308149	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024853	chr7	+	1243	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	3	-2	3	2	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGTGTTCATGTCCAG	1310	False	NA	25	True	AATAAA	-26	NA	133311064	133322876	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024870	chr7	+	1309	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	-28	404	-28	-404	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTAGAATGTCTCTG	NA	False	NA	37	True	AATAAA	-25	NA	137039314	137069919	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024875	chr7	+	1225	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	6	-407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1125.61681312958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	34	True	AATAAA	-22	NA	137039399	137069916	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061276_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024882	chr7	-	1617	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	11	128	0	-128	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	-24	True	AATAAA	-19	NA	138511224	138492692	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024915	chr7	+	1339	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	1	167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	150.393783116191	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCTCTGGCTTCTCTT	NA	False	NA	29	True	AATAAA	-30	NA	139717562	139730527	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_139717687_139718231_139718312_139720121_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000024920	chr7	+	688	4	FSM	ENSMUSG00000025481.13	ENSMUST00000106050.8	719	4	115	-84	115	5	multi-exon	FALSE	canonical	3	242	junction_1	5.43650214343336	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTATCATTGGGAT	NA	False	NA	32	True	AATAAA	-22	NA	140415045	140417884	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_140415172_140415524_140415665_140416659_140416796_140417598
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025053	chr7	+	1476	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	58	-1	3	1	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGACCTCTTCCTGTG	NA	False	NA	43	True	AATAAA	-31	NA	142606533	142621672	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025160	chr8	+	1931	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	41	-1	41	0	multi-exon	FALSE	canonical	3	111	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	16	True	NA	NA	NA	11608469	11613251	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_11608567_11611417
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025164	chr8	-	2274	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	12	-1	12	0	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685742	11661582	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025211	chr8	-	2419	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	47	-3	13	3	multi-exon	FALSE	canonical	3	271	junction_2	12.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGTGTATATTTATTG	4827	False	NA	-1	True	ATTAAA	-21	NA	14024730	14002004	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_14004136_14005719_14005818_14024540
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025221	chr8	+	2320	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	756	3781	-137	2880	multi-exon	FALSE	canonical	3	162	junction_1	24.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14938866	14947939	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_14939119_14944571_14945231_14946530
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025299	chr8	-	4796	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	85	-5	-4	5	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTCTCTAGCACCTTT	NA	False	NA	NA	False	AATAAA	-30	NA	26275230	26254560	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025465	chr8	-	1171	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	13	-6	13	6	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGCCTGTTTATTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	57940881	57935734	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025528	chr8	-	522	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	894	-17	894	17	3prime_fragment	FALSE	canonical	3	6124	junction_2	115.905133622286	561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATCGTGGATCCTTAAT	NA	False	NA	-3	True	AATAAA	-34	NA	70354314	70346812	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025533	chr8	-	487	4	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	920	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2953.33171557518	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGACTCTATCGTGGATC	NA	False	NA	-9	True	AATAAA	-28	NA	70354288	70346818	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_70347061_70347153_70347226_70347891_70347964_70354187
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025561	chr8	-	1517	13	NNC	ENSMUSG00000057788.14	novel	2137	13	NA	NA	-3	135	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	81.058063893867	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9965	False	NA	-5	True	AGTAAA	-19	NA	70755105	70746100	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_70746338_70746477_70746550_70746648_70746733_70747332_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025589	chr8	-	531	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	13	-3	13	0	multi-exon	FALSE	canonical	3	1892	junction_3	9741.86690983247	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70963054	70960912	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025591	chr8	-	519	4	NNC	ENSMUSG00000090137.9	novel	711	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	600	junction_3	10350.848864814	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70963035	70960912	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_70961179_70961945_70962033_70962170_70962285_70962983
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025606	chr8	-	1121	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	95	0	5	0	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70975735	70966045	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025683	chr8	-	589	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12204.1210048082	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350048	71348022	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_71348152_71348243_71348348_71348559_71348690_71348776_71348957_71350002
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025687	chr8	-	590	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	12201.6034064175	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350048	71348022	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_71348152_71348243_71348354_71348564_71348690_71348776_71348957_71350002
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025692	chr8	-	801	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212019.2	795	4	-6	0	-4	0	multi-exon	FALSE	canonical	3	16397	junction_3	7846.8208565989	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350048	71348022	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_71348152_71348243_71348690_71348776_71348957_71350002
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025794	chr8	-	455	1	FSM	ENSMUSG00000070713.6	ENSMUST00000075602.8	1151	1	-6	702	-6	-702	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTAAGCTA	NA	False	NA	NA	False	TATAAA	-20	NA	73059110	73058655	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_73058700_73059100
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025798	chr8	+	1489	3	NNC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	41	-305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1493.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73072917	73075195	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_73072994_73073269_73074075_73074587
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025804	chr8	+	1434	2	ISM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	384	305	384	-305	3prime_fragment	FALSE	canonical	3	2955	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73073260	73075195	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_73074087_73074587
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025817	chr8	+	1019	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	14	-9	9	9	multi-exon	FALSE	canonical	3	644	junction_5	27.2197844713485	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGCAGTGTCGACCTC	NA	False	NA	33	True	AATAAA	-30	NA	73449926	73466543	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025846	chr8	-	1686	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	10	-1	-9	1	multi-exon	FALSE	canonical	3	249	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTTGATTTCTCCC	NA	False	NA	NA	False	AGTAAA	-19	NA	79235517	79231896	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_79233493_79235427
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025886	chr8	-	1654	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	23	-2	8	2	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGGTACTGAGTTCT	NA	False	NA	-15	True	AATAAA	-19	NA	83500766	83490247	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025934	chr8	-	879	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	24	-269	24	269	multi-exon	FALSE	canonical	3	87	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACGCGTGCGTATCAT	2872	False	NA	-2	True	AATAAA	-17	NA	84771605	84769288	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_84769961_84771398
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025961	chr8	-	4306	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	40	-2	40	2	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCTCTGCTCACT	NA	False	NA	-4	True	AATAAA	-21	NA	85414491	85397105	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000025965	chr8	+	2117	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	429	21	6	0	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415923	85426416	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026049	chr8	+	1352	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	-18	-1	-18	1	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCATCCTTGGTGTCAGG	NA	False	NA	24	True	AATAAA	-30	NA	85798367	85801792	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026104	chr8	-	2362	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	12	1251	12	477	multi-exon	TRUE	canonical	3	463	junction_12	36.2439650148821	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTGGTGTGTCAGCTG	NA	False	NA	-4	True	AATAAA	-21	NA	89088810	89058937	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026150	chr8	+	226	1	FSM	ENSMUSG00000031765.9	ENSMUST00000211807.2	1085	1	861	-2	861	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94906729	94906955	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_94906700_94907000
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026153	chr8	+	2683	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	24	0	11	0	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941215	95041488	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026173	chr8	-	1503	8	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-7	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	587.903990495741	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGAGTGTGTCTTTGTG	NA	False	NA	-6	True	ATTAAA	-27	NA	95559330	95549180	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559144
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026188	chr8	+	1194	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	60	326	-8	175	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCATCGTGCCACTAAC	NA	False	NA	32	True	AATAAA	-23	NA	95584137	95590544	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026221	chr8	-	3267	11	ISM	ENSMUSG00000036534.7	ENSMUST00000040481.4	3333	12	630	0	613	0	3prime_fragment	FALSE	canonical	3	251	junction_7	40.918944267906	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96579537	96562547	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026308	chr8	+	4403	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	27	0	-1	0	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5076	False	NA	26	True	ATTAAA	-18	NA	107330009	107396878	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026412	chr8	+	954	4	NNC	ENSMUSG00000031950.8	novel	1677	4	NA	NA	-25	173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1291.41326546626	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	112667364	112679547	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_112667485_112667791_112667852_112669133_112669307_112678946
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026435	chr8	+	1775	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-6	-1	4	1	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117648472	117668243	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026506	chr8	-	3505	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	17	-5	17	5	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTTCTGTGGTCTG	NA	False	NA	NA	False	TTTAAA	-23	NA	122634416	122607883	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026544	chr8	+	592	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	-2	1069	-2	-1069	multi-exon	FALSE	canonical	3	528	junction_1	75.9884859699152	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGTTGTCCTGTGTCAG	5520	False	NA	26	True	ACTAAA	-18	NA	123338382	123342330	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026547	chr8	+	588	5	NNC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	0	-1069	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	256.054071438046	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGTTGTCCTGTGTCAG	5522	False	NA	26	True	ACTAAA	-18	NA	123338384	123342330	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_123338433_123339804_123339976_123340659_123340748_123341046_123341127_123342129
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026578	chr8	-	1119	7	FSM	ENSMUSG00000000739.15	ENSMUST00000000755.15	3805	7	31	2655	-11	2	multi-exon	FALSE	canonical	3	57	junction_6	18.7764628073435	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGACTCTGTCCCAGGCT	9774	False	NA	-5	True	AATAAA	-18	NA	123884978	123869585	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884327_123884926
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026609	chr8	+	2499	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-10	1738	-10	563	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGTCTCAGATAAGACC	7485	False	NA	16	True	ATTAAA	-19	NA	124204631	124228917	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026645	chr8	+	2951	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	33	0	-6	0	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAATGGTCTTATTAAC	5153	False	NA	34	True	AATAAA	-25	NA	125589804	125616796	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026724	chr9	+	1320	12	NIC	ENSMUSG00000031939.17	novel	1210	11	NA	NA	542	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	161.659830590182	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9729	False	NA	7	True	NA	NA	NA	15218166	15228274	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026746	chr9	-	2034	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	25	-3	0	0	multi-exon	FALSE	canonical	3	47	junction_2	23	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556038	20549081	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_20550495_20553319_20553393_20555490
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026749	chr9	+	447	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	1493	174	-10	13	multi-exon	FALSE	canonical	3	1046	junction_4	63.2114507031756	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTGAGAGTTGTGT	NA	False	NA	31	True	AATAAA	-28	NA	20556106	20558086	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026786	chr9	+	2524	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	9	2	9	-2	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGAGTTTGTGTAC	NA	False	NA	14	True	AATAAA	-19	NA	20927289	20940111	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000026853	chr9	+	1825	2	FSM	ENSMUSG00000051238.7	ENSMUST00000053583.7	1838	2	13	0	13	0	multi-exon	FALSE	canonical	3	72	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGACTCTGGTGGTCTG	NA	False	NA	8	True	NA	NA	NA	21867063	21869560	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_21867301_21867972
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027045	chr9	-	3472	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	26	574	-21	-574	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACTGGACTCTAACTT	NA	False	NA	-15	True	AATAAA	-20	NA	44679116	44653434	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027076	chr9	+	1827	14	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-15	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	198.854262593185	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTGCGTTCATGTC	NA	False	NA	14	True	ATTAAA	-21	NA	46184475	46192902	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187501_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027081	chr9	+	2198	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	14	327	14	0	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCCTAACTGGGTATT	NA	False	NA	45	True	AATAAA	-22	NA	46194319	46210081	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027093	chr9	-	1865	6	NNC	ENSMUSG00000042396.11	novel	1867	6	NA	NA	18	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	182.483314305719	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCTTTATTTTGACG	NA	False	NA	0	True	ATTAAA	-16	NA	48406576	48399996	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405578_48405688_48406454
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027180	chr9	+	2081	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	369.828526331987	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116243	55131717	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_55116473_55116636_55116780_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027185	chr9	-	1339	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	68	-15	-55	15	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCTAGCTTCTTAATAA	NA	False	NA	2	True	AATAAA	-45	NA	55419459	55361776	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027191	chr9	-	1695	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	21	0	21	0	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	False	NA	-3	True	AATAAA	-17	NA	56068320	56043167	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027256	chr9	+	2027	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	-2	-1	-2	1	multi-exon	FALSE	canonical	3	310	junction_5	36.1815151813233	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATAATACTCTTTAT	535	False	NA	NA	False	AATAAA	-17	NA	58489572	58560162	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027277	chr9	+	1824	14	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_13	339.684242518526	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446989	59472392	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471266_59472103
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027284	chr9	+	2219	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7085.08993662042	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1882	False	NA	17	True	AATAAA	-17	NA	59563868	59586655	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575968_59576195_59576383_59577749_59578021_59578857_59579013_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027294	chr9	+	2178	11	Fusion	ENSMUSG00000111394.2_ENSMUSG00000032294.18	novel	725	6	NA	NA	4	-3	multi-exon	FALSE	canonical	0	0	junction_7	6949.01488629863	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	2540	False	NA	17	True	AATAAA	-17	NA	59564526	59586655	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Fusion_chr9_+_59564554_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579013_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027301	chr9	-	1449	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	23	2210	1	1	multi-exon	FALSE	canonical	3	38	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGGTGTGTGGTGCAT	6441	False	NA	-21	True	AATAAA	-16	NA	59657909	59643751	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_59645152_59657860
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027309	chr9	-	487	3	NNC	ENSMUSG00000007892.9	novel	499	3	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	2	1164	junction_2	5542	105	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACTGGTCTCACTTGTA	NA	False	NA	-26	True	AATAAA	-16	NA	61821813	61820563	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_61820804_61821169_61821242_61821638
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027354	chr9	+	1376	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-7	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6095.37274404846	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080667	64085801	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085182_64085300_64085504
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027372	chr9	+	845	4	FSM	ENSMUSG00000032399.9	ENSMUST00000213760.2	596	4	0	-249	0	-147	multi-exon	FALSE	canonical	3	19599	junction_2	572.368956375363	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64084416	64085801	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_64084760_64085002_64085087_64085178_64085300_64085504
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027397	chr9	+	1097	6	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	6498	2	combination_of_known_splicesites	FALSE	canonical	3	80	junction_1	951.643084354633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	NA	False	NA	16	True	AATAAA	-16	NA	64195386	64212076	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_64195526_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027410	chr9	-	1019	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	13	1304	-3	2	multi-exon	TRUE	canonical	3	899	junction_3	39.0160223497988	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTTACTCTTCATCA	NA	False	NA	-2	True	AATAAA	-22	NA	64645027	64623884	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027580	chr9	+	991	6	ISM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	6191	0	6191	0	3prime_fragment	FALSE	canonical	3	2950	junction_4	256.764795094655	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78105419	78116631	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027610	chr9	-	552	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	3	7420	junction_2	85368.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275427	78274333	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78274577_78275002_78275151_78275266
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027611	chr9	-	582	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89078.5	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275427	78274333	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78274577_78275002_78275186_78275271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027613	chr9	-	668	2	ISM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	32	0	32	0	intron_retention	FALSE	canonical	3	178157	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275427	78274333	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_78274577_78275002
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027644	chr9	-	1697	7	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5340.69375695289	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	8134	False	NA	98	True	ATTAAA	-18	NA	78387972	78385734	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387801
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027656	chr9	-	1702	7	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6676.51280401844	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	8134	False	NA	98	True	ATTAAA	-18	NA	78387972	78385734	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387141_78387431_78387522_78387703_78387788
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027660	chr9	-	1732	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	66	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6275.98032670789	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7166	False	NA	98	True	ATTAAA	-18	NA	78388940	78385734	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387518_78387703_78387788_78387971_78388920
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027733	chr9	-	636	4	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	301	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	489.904979448963	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404640	88403104	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_88403502_88403970_88404029_88404357_88404435_88404536
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027765	chr9	+	1579	9	NNC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-160	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	108.353515748221	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTTACTTTACAAAT	NA	False	NA	NA	False	NA	NA	NA	92132234	92154036	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145335_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027769	chr9	-	3939	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	11	0	11	0	multi-exon	FALSE	canonical	3	138	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTACTCTGTCTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	94420123	94399916	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_94402700_94406444_94406749_94419271
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027796	chr9	-	1198	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	0	-1	0	1	multi-exon	FALSE	canonical	3	442	junction_2	42.1929484387994	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTAATTCGTTTTTT	NA	False	NA	-8	True	ATTAAA	-21	NA	98483713	98470781	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027855	chr9	+	3697	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	17	33	16	-33	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCGTAAACAGGATTTT	NA	False	NA	21	True	TATAAA	-18	NA	106048143	106068305	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027861	chr9	+	1578	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	18	0	-11	0	multi-exon	FALSE	canonical	3	299	junction_8	33.0111250186963	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	False	NA	19	True	AATAAA	-16	NA	106080324	106092588	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000027915	chr9	+	1644	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	21	0	21	0	multi-exon	FALSE	canonical	3	242	junction_1	4.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGAGTGGCGTCCAGTG	NA	False	NA	20	True	AATAAA	-21	NA	107440474	107443311	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_107440732_107441774_107441896_107442045
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028009	chr9	+	1728	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	17	1	-7	0	multi-exon	FALSE	canonical	3	83	junction_8	26.2473926292634	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	108447101	108449972	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028021	chr9	+	4966	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	5	-6	5	6	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTCTCCTGTTGTA	1308	False	NA	26	True	AATAAA	-26	NA	108569346	108627641	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028032	chr9	+	1570	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1710.52240842446	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765780	108778691	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778009_108778083_108778502
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028048	chr9	+	1454	3	ISM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	6841	0	6841	0	3prime_fragment	FALSE	canonical	3	81	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTTATATCAGACTCAG	3748	False	NA	14	True	ATTAAA	-28	NA	108918401	108921557	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108918716_108919908_108920074_108920582
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028082	chr9	+	810	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	12	12	-10	1	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTTTCATTTCCTA	8494	False	NA	17	True	AATAAA	-17	NA	110485582	110540662	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028105	chr9	-	1703	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	-31	2	-31	-2	multi-exon	FALSE	canonical	3	526	junction_5	47.5280618862864	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTCTCCGTCCTTCC	NA	False	NA	NA	False	GATAAA	-18	NA	114219774	114204203	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028128	chr9	-	1130	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	-133	-4	-126	4	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTGCATGAGATGTC	NA	False	NA	-10	True	AATAAA	-20	NA	114611050	114585899	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028169	chr9	+	1037	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	-4	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1987.53948947492	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGACTGTACCTGGATT	NA	False	NA	19	True	AATAAA	-29	NA	119956863	119960639	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_119956897_119957522_119957689_119958223_119958347_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028200	chr9	+	693	5	NNC	ENSMUSG00000025794.10	novel	1271	5	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	7239.71142380689	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120401156	120403501	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_120401264_120401833_120401929_120402641_120402742_120402833_120402884_120403160
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028226	chr9	+	541	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	36	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	21	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	11	True	AATAAA	-16	NA	121539430	121541987	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_121539538_121539704_121539782_121541630
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028254	chr9	-	1330	9	ISM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	2201	2640	2104	401	3prime_fragment	FALSE	canonical	3	93	junction_4	7.36439916082772	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAATTTATCTAATCATC	NA	False	NA	3	True	AATAAA	-21	NA	123544489	123528716	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028277	chrM	+	338	1	FSM	ENSMUSG00000064360.1	ENSMUST00000082411.1	348	1	11	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGTAATTAGTTTAAAAAAA	9	False	NA	NA	False	AGTAAA	-1	NA	9469	9807	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_9500_9800
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028281	chrM	+	1658	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	-280	0	-280	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAATATAGTTTACAAAAA	9	False	NA	13	True	NA	NA	NA	9886	11544	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_9900_11500
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028300	chrUn_MU069435v1	+	588	1	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGGGCTTTCCCGTGGC	NA	False	NA	28	True	NA	NA	NA	0	588	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chrUn_MU069435v1_+_0_600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028303	chrUn_MU069435v1	+	292	2	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	139	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACGTTTCCAGTTAT	NA	False	NA	NA	False	AATGAA	-5	NA	3309	3842	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chrUn_MU069435v1_+_3351_3591
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028304	chrUn_MU069435v1	+	248	3	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	139	junction_1	109.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGCAGTTGTAGGACA	NA	False	NA	NA	False	NA	NA	NA	3309	7362	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chrUn_MU069435v1_+_3351_3591_3670_7233
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028309	chrUn_MU069435v1	+	491	2	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTCCAGCTATTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	14904	22056	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chrUn_MU069435v1_+_15016_21676
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028383	chrX	-	1136	7	NNC	ENSMUSG00000031167.17	novel	1338	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_2	414.293541934808	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATAATGCTTTT	6572	False	NA	-11	True	ATTAAA	-21	NA	8011925	8008601	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_8009195_8009489_8009565_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028385	chrX	-	2368	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	270	10	-20	1	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGGTATGTGTATT	NA	False	NA	-17	True	NA	NA	NA	8042150	8020720	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028434	chrX	+	4630	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	63	-1	1	1	multi-exon	TRUE	canonical	3	179	junction_1	98.1322449554681	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGTTTGATTGTCCATT	NA	False	NA	19	True	AATAAA	-19	NA	13147271	13160292	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028445	chrX	+	1946	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	147	2074	147	-2074	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTAGCATCCAATG	NA	False	NA	10	True	AATAAA	-20	NA	16486083	16551983	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028511	chrX	+	1845	3	NNC	ENSMUSG00000006373.11	novel	1857	3	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	269	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAGGCTTTCATTTTTT	1680	False	NA	NA	False	AATAAA	-17	NA	35861870	35869734	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_35862268_35865775_35865930_35868440
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028535	chrX	-	445	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	172	-5	-64	5	multi-exon	FALSE	canonical	3	12849	junction_1	35	1467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGATAAGGCTTCTTCTG	NA	False	NA	0	True	TATAAA	-22	NA	36348883	36346167	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_36346403_36347637_36347742_36348777
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028541	chrX	-	1287	2	ISM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	14498	0	8699	0	3prime_fragment	FALSE	canonical	3	274	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36359477	36355330	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_36356315_36359174
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028631	chrX	-	2256	8	FSM	ENSMUSG00000055653.14	ENSMUST00000069360.14	2216	8	-40	0	-11	0	multi-exon	FALSE	canonical	3	233	junction_6	17.9398086582293	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGGTCCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	51702838	51361302	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_51361832_51403713_51403874_51454598_51454720_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028647	chrX	+	1452	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-23	-2	-23	2	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTACCTGTAGTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	52726769	52740410	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028656	chrX	-	1222	8	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	490.52375173931	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	-10	True	AGTAAA	-18	NA	52759797	52744866	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52752956_52753054_52753476_52753824_52759728
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028666	chrX	-	983	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	2	-1	2	1	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	52799661	52785713	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028719	chrX	-	705	2	Genic_Genomic	ENSMUSG00000082926.4	novel	750	1	NA	NA	-30	40	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	68649881	68649061	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_68649598_68649712
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028722	chrX	+	1084	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	12	-2	12	2	multi-exon	FALSE	canonical	3	343	junction_1	1.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTAGCTCCCTTT	NA	False	NA	16	True	AATAAA	-23	NA	69429494	69433025	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_69429758_69431499_69431773_69432477
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028770	chrX	-	1602	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	-16	-2	-16	2	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-6	True	AATAAA	-18	NA	72309012	72298143	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028779	chrX	+	2728	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	-2	-4	-2	4	multi-exon	TRUE	canonical	3	583	junction_1	9.62635271879577	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGTTGCTTCTTGGAC	NA	False	NA	32	True	AATAAA	-26	NA	72683022	72687124	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028838	chrX	-	1708	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	25	6	4	-5	multi-exon	FALSE	canonical	3	119	junction_2	51.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGTAAACTTAGAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	73129271	73078899	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_73080101_73080587_73080939_73129115
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028858	chrX	+	741	6	NNC	ENSMUSG00000008682.14	novel	855	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3699.23188783834	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314583	73316741	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316445_73316520
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028866	chrX	+	561	2	ISM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	1635	0	658	0	3prime_fragment	FALSE	canonical	3	9593	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73316100	73316741	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73316441_73316520
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000028976	chrX	+	897	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	19	-132	-18	0	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	93410741	93460699	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029017	chrX	-	2238	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	12	-18	-8	6	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128966	100122809	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029077	chrX	-	882	6	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	964	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6584.57465292937	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101231978	101228547	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231423_101231609_101231899
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029144	chrX	+	967	9	NNC	ENSMUSG00000025525.13	novel	1359	9	NA	NA	36	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	138.599636994474	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGTAAAATCATAAATTAA	NA	False	NA	13	True	AATAAA	-21	NA	111221098	111282132	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274162_111274268_111281890
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029162	chrX	+	481	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5286.05620358883	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTCCTGTTGAGTGG	NA	False	NA	81	True	ATTAAA	-22	NA	133486414	133488811	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_133486469_133486826_133486933_133487259_133487332_133488199_133488323_133488685
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029191	chrX	-	838	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	65	0	65	0	multi-exon	FALSE	canonical	3	901	junction_2	34	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTAGTTCTTTAAAGG	4221	False	NA	0	True	AATAAA	-18	NA	134968920	134967312	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_134967957_134968348_134968422_134968799
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029203	chrX	+	781	3	NNC	ENSMUSG00000047844.4	novel	837	3	NA	NA	62	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2148.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCAGTCATCTTCTAC	NA	False	NA	NA	False	AATAAA	-19	NA	135039806	135041194	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_135039916_135040271_135040353_135040603
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029265	chrX	-	428	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	22	0	22	0	multi-exon	FALSE	canonical	3	182	junction_2	19	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135858752	135856013	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_135856232_135857483_135857589_135858647
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029432	chrX	+	3542	5	ISM	ENSMUSG00000031381.17	ENSMUST00000112255.8	3597	6	2673	-3	-2	0	3prime_fragment	FALSE	canonical	3	160	junction_1	42.1337157155644	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163205577	163216912	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029434	chrX	+	3164	5	ISM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	2796	-5	-1	0	3prime_fragment	FALSE	canonical	3	48	junction_1	87.973007223807	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163205578	163216912	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029451	chrX	-	607	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	161	0	-5	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165992150	165990088	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_165990532_165990932_165991048_165992101
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029467	chrY	+	1009	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-541	0	intron_retention	FALSE	canonical	3	234	junction_2	696.056211810512	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	3411	False	NA	NA	False	AATAAA	-18	NA	90795465	90827734	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrY_+_90795676_90795777_90795948_90796858_90797249_90804564_90804687_90827617
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029482	SIRV1	-	970	3	NNC	SIRV1A	novel	973	3	NA	NA	11	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	452.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10775	995	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV1_-_1485_7552_7801_10542
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029500	SIRV1	-	1552	6	NNC	SIRV1A	novel	1561	6	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2399.0091621334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10774	1000	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV1_-_1485_6337_6474_6557_6814_7552_7815_10282_10367_10444
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029501	SIRV1	-	1547	6	NNC	SIRV1A	novel	1561	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2380.49302456445	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10775	1000	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10447
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029511	SIRV1	-	1289	4	FSM	SIRV1A	SIRV102	1300	4	11	0	11	0	multi-exon	FALSE	canonical	3	4191	junction_1	833.052752764727	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10355	1006	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029515	SIRV1	-	659	5	FSM	SIRV1A	SIRV105	670	5	11	0	11	0	multi-exon	FALSE	canonical	3	1547	junction_4	2187.81237769604	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10629	6449	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029527	SIRV1	+	454	3	FSM	SIRV1B	SIRV109	464	3	10	0	10	0	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10721	11643	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV1_+_10792_10882_11058_11434
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029543	SIRV2	-	1961	11	FSM	SIRV2A	SIRV202	1971	11	11	-1	-5	1	multi-exon	FALSE	canonical	3	173	junction_6	1003.16519576788	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCTCTATAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	5900	1034	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029548	SIRV2	+	512	1	FSM	SIRV2B	SIRV205	523	1	11	0	11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1119	1631	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV2_+_1100_1600
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029551	SIRV2	-	729	3	FSM	SIRV2A	SIRV204	740	3	11	0	11	0	multi-exon	FALSE	canonical	3	2423	junction_1	198	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4721	3643	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV2_-_3826_3966_4480_4687
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029552	SIRV2	-	725	3	NNC	SIRV2A	novel	740	3	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_1	1409.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4720	3643	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV2_-_3826_3969_4480_4687
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029560	SIRV2	-	675	5	FSM	SIRV2A	SIRV203	686	5	11	0	11	0	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5884	3665	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029561	SIRV2	-	670	5	NNC	SIRV2A	novel	686	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1085.38066479001	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5882	3665	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV2_-_3826_3969_4095_4338_4480_4687_4801_5751
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029562	SIRV2	-	676	5	NNC	SIRV2A	novel	686	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1085.38066479001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5882	3665	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV2_-_3826_3963_4095_4338_4480_4687_4801_5751
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029563	SIRV2	-	669	5	NNC	SIRV2A	novel	686	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1089.1164710443	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5882	3665	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV2_-_3826_3966_4095_4342_4480_4687_4801_5751
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029572	SIRV2	+	413	1	FSM	SIRV2C	SIRV206	424	1	11	0	11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4044	4457	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV2_+_4000_4500
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029575	SIRV3	-	471	3	FSM	SIRV3B	SIRV308	479	3	11	-3	11	3	multi-exon	FALSE	canonical	3	5391	junction_1	17	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGTATGGCGGACAT	NA	False	NA	NA	False	NA	NA	NA	1971	997	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV3_-_1168_1532_1765_1902
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029579	SIRV3	+	2362	3	FSM	SIRV3A	SIRV306	2373	3	11	0	-8	0	multi-exon	FALSE	canonical	3	759	junction_2	1218.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1955	8292	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV3_+_2006_4003_4081_6057
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029585	SIRV3	+	2456	5	FSM	SIRV3A	SIRV301	2467	5	12	-1	-7	1	multi-exon	FALSE	canonical	3	1234	junction_3	576.603416569829	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1956	8940	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029597	SIRV3	+	1078	8	NNC	SIRV3A	novel	1083	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1147.84278593564	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1975	8937	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7363_7861_7989_8124_8208_8755
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029598	SIRV3	+	768	5	FSM	SIRV3A	SIRV307	779	5	12	-1	12	1	multi-exon	FALSE	canonical	3	1252	junction_4	794.143052289699	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1975	8940	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029599	SIRV3	+	1083	8	NNC	SIRV3A	novel	1083	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1321.52430541247	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1975	8937	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7363_7861_7987_8117_8208_8755
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029600	SIRV3	+	763	5	NNC	SIRV3A	novel	779	5	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1139.10631088586	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1975	8940	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV3_+_2006_4003_4076_4574_4775_6057_6334_8755
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029614	SIRV3	+	426	3	FSM	SIRV3A	SIRV305	436	3	10	0	10	0	multi-exon	FALSE	canonical	3	1609	junction_2	828.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4013	6718	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV3_+_4081_4568_4780_6570
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029628	SIRV3	-	784	3	FSM	SIRV3C	SIRV309	796	3	12	0	12	0	multi-exon	FALSE	canonical	3	1394	junction_2	16	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9931	8797	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV3_-_8976_9189_9299_9434
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029632	SIRV4	+	1553	3	NNC	SIRV4C	novel	1567	3	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	509.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1011	3403	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV4_+_1344_1678_1886_2389
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029634	SIRV4	+	1556	3	FSM	SIRV4C	SIRV409	1567	3	11	0	11	0	multi-exon	FALSE	canonical	3	1019	junction_2	11.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1011	3403	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV4_+_1347_1678_1886_2389
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029641	SIRV4	-	624	2	FSM	SIRV4B	SIRV406	617	2	11	-18	11	18	multi-exon	FALSE	canonical	3	2584	junction_1	0	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACTTCAAGCTGTAGTA	NA	False	NA	NA	False	TTTAAA	-9	NA	5147	3619	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV4_-_4104_5007
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029645	SIRV4	-	581	4	FSM	SIRV4A	SIRV404	592	4	11	0	11	0	multi-exon	FALSE	canonical	3	669	junction_3	2787.93595494747	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14612	8322	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029649	SIRV4	-	616	2	FSM	SIRV4A	SIRV405	626	2	10	0	10	0	multi-exon	FALSE	canonical	3	7498	junction_1	0	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13927	8629	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV4_-_8991_13672
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029659	SIRV5	+	2075	17	NNC	SIRV5A	novel	2085	17	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	3250.47321554878	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1020	10991	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029671	SIRV5	+	1976	18	NNC	SIRV5A	novel	1984	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3642.47992539704	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1031	10991	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029674	SIRV5	+	524	6	FSM	SIRV5A	SIRV507	533	6	10	-1	9	1	multi-exon	FALSE	canonical	3	3871	junction_1	2708.37786137754	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTAAGTGGTCAAGCCACG	NA	False	NA	NA	False	NA	NA	NA	1037	3599	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029676	SIRV5	+	499	5	NNC	SIRV5A	novel	533	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4159.52611483568	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1038	3598	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV5_+_1150_1925_2048_2270_2316_3298_3405_3483
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029696	SIRV5	-	216	1	FSM	SIRV5B	SIRV512	229	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTAGACCTTTA	NA	False	NA	NA	False	AATATA	-23	NA	2393	2177	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV5_-_2200_2400
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029699	SIRV5	+	524	2	ISM	SIRV5A	SIRV503	526	3	10	134	10	17	5prime_fragment	FALSE	canonical	3	11825	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCAAGACCTCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	8211	11008	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_SIRV5_+_8586_10858
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029726	SIRV6	+	1515	10	FSM	SIRV6A	SIRV612	1528	10	13	0	13	0	multi-exon	TRUE	canonical	0	0	junction_4	7772.9807349673	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1100	11825	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029744	SIRV6	+	563	4	FSM	SIRV6A	SIRV607	574	4	11	0	4	0	multi-exon	FALSE	canonical	0	0	junction_3	10529.1711924538	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1141	2540	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029745	SIRV6	+	571	4	NNC	SIRV6A	novel	574	4	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_3	10529.1711924538	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1141	2540	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_1187_1468_1736_1845_2035_2470
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029746	SIRV6	+	1077	9	FSM	SIRV6A	SIRV605	1088	9	11	0	4	0	multi-exon	FALSE	canonical	0	0	junction_4	8239.38325968637	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1141	11331	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029764	SIRV6	+	475	4	FSM	SIRV6A	SIRV609	485	4	10	0	10	0	multi-exon	FALSE	canonical	3	15063	junction_3	5493.41668626083	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1147	2120	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029768	SIRV6	+	463	4	NNC	SIRV6A	novel	485	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12563.7680476661	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1148	2120	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_1187_1468_1535_1640_1736_1856
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029777	SIRV6	+	437	3	NNC	SIRV6A	novel	454	3	NA	NA	15	0	intron_retention	FALSE	canonical	1	2	junction_2	1327	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1318	1950	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_1382_1468_1535_1642
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029784	SIRV6	+	521	4	FSM	SIRV6A	SIRV616	531	4	11	-1	11	1	multi-exon	FALSE	canonical	3	918	junction_2	7304.14215816386	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAAAAGTAATAGTGCA	NA	False	NA	NA	False	NA	NA	NA	2296	10789	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029785	SIRV6	+	1339	5	FSM	SIRV6A	SIRV610	1163	5	-176	0	11	0	multi-exon	FALSE	canonical	3	12902	junction_1	2966.72052736688	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2296	11690	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029791	SIRV6	+	525	4	NNC	SIRV6A	novel	531	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5877.64677022663	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2297	10788	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_2621_2740_2815_3106_3171_10724
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029794	SIRV6	+	1341	5	NNC	SIRV6A	novel	1163	5	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_1	8449.77568859079	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2297	11690	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_2621_2737_2829_3106_3165_10724_11109_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029801	SIRV6	-	179	1	FSM	SIRV6C	SIRV618	189	1	11	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTAGCTGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	2536	2357	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_-_2400_2500
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029805	SIRV6	+	1157	5	NNC	SIRV6A	novel	1163	5	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_4	8080.86438368446	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2483	11690	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_2621_2740_2829_3106_3165_10724_11114_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029809	SIRV6	+	453	5	NNC	SIRV6A	novel	459	5	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8230.433402926	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2528	10818	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_2621_2737_2829_3106_3165_7805_7924_10724
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029813	SIRV6	+	367	4	FSM	SIRV6A	SIRV608	377	4	10	0	10	0	multi-exon	FALSE	canonical	3	18415	junction_1	2118.18355095954	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3033	11270	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029817	SIRV6	+	369	4	NNC	SIRV6A	novel	377	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9969.73374212616	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3036	11270	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_3165_10724_10819_11031_11114_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029822	SIRV6	+	1305	6	NNC	SIRV6A	novel	1311	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9774.15061066689	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3115	11824	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_3165_7104_7453_7805_7924_10724_10819_11031_11109_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029824	SIRV6	+	1305	6	NNC	SIRV6A	novel	1311	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8875.54686540497	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3116	11824	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11114_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029825	SIRV6	+	1300	6	FSM	SIRV6A	SIRV613	1311	6	11	0	11	0	multi-exon	FALSE	canonical	3	472	junction_2	9686.74001715748	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3116	11824	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029833	SIRV6	+	1959	1	FSM	SIRV6A	SIRV603	1969	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	9009	10968	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6_+_9000_11000
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029841	SIRV6	+	776	3	NNC	SIRV6A	novel	783	3	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10249	11330	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV6_+_10819_11031_11114_11205
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029847	SIRV6003	+	5990	1	FSM	SIRV6003A	SIRV6003	6000	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	10	6000	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV6003_+_0_6000
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029849	SIRV7	-	2234	6	FSM	SIRV7A	SIRV702	2247	6	13	0	13	0	multi-exon	FALSE	canonical	3	229	junction_3	1351.00954844886	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114903	1000	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029850	SIRV7	-	2485	5	FSM	SIRV7A	SIRV703	2498	5	13	0	13	0	multi-exon	FALSE	canonical	3	1087	junction_2	1651.92015167199	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147905	1000	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029853	SIRV7	-	2482	5	NNC	SIRV7A	novel	2498	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1334.65969445398	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147905	1000	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147611
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029864	SIRV7	-	2456	5	NNC	SIRV7A	novel	2462	5	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1838.52148478064	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147912	1001	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV7_-_2676_2993_3115_43028_43078_114680_114989_147608
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029865	SIRV7	-	2459	5	NNC	SIRV7A	novel	2462	5	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1290.30122452085	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147912	1001	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147602
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029867	SIRV7	-	2450	5	NNC	SIRV7A	novel	2462	5	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1290.30122452085	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147912	1001	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147611
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029868	SIRV7	-	2453	5	FSM	SIRV7A	SIRV701	2462	5	11	-2	6	-1	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147912	1001	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029886	SIRV7	-	932	5	NNC	SIRV7A	novel	949	5	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_1	2429.24714417862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147944	56031	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV7_-_56086_70877_70988_78841_78966_114680_114989_147608
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029888	SIRV7	-	946	5	NNC	SIRV7A	novel	949	5	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_1	2429.24714417862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147946	56031	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV7_-_56098_70877_70988_78841_78966_114680_114989_147608
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029898	SIRV7	-	915	5	NNC	SIRV7A	novel	949	5	NA	NA	13	-1	intron_retention	FALSE	canonical	0	0	junction_1	1966.74216662988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147944	56032	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV7_-_56098_70877_70988_78841_78966_114680_114961_147608
ONT_directRNA_Mouse_MpreCap_0+_F121-9_Total_None.NAM_TM_000000029902	SIRV7	-	906	5	NNC	SIRV7A	novel	949	5	NA	NA	13	-1	intron_retention	FALSE	canonical	0	0	junction_3	2066.85127367694	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGATCGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	147944	56032	ES_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_SIRV7_-_56098_70883_70988_78841_78966_114680_114961_147611
